mRNA_Ecto-sp13_S_contig10037.57.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10037.57.1 vs. uniprot
Match: D8LCU6_ECTSI (ADP-ribose pyrophosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCU6_ECTSI) HSP 1 Score: 262 bits (670), Expect = 2.670e-86 Identity = 135/139 (97.12%), Postives = 137/139 (98.56%), Query Frame = 1 Query: 1 AAARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTVTVAFMAWAPSKAGCNARAGDDAAEARFFPVERLPSMAFDHLKVITDSWARCRFGATNDGGGVSVEDKASGQALGEYSTSSTSGAAGSVGAEALGLLVPTEASS 417
AAARRELEEETGVTNRTMVQTGAYGDPGRDPRGHT+TVAFMAWAPSKA C+ARAGDDAAEARFFPVERLPSMAFDHLKVITDSWARCRFGATNDGGGVSVEDKASGQALGEYSTSSTSGAAGSVGAEALGLLVP EASS
Sbjct: 152 AAARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTITVAFMAWAPSKAACSARAGDDAAEARFFPVERLPSMAFDHLKVITDSWARCRFGATNDGGGVSVEDKASGQALGEYSTSSTSGAAGSVGAEALGLLVPVEASS 290
BLAST of mRNA_Ecto-sp13_S_contig10037.57.1 vs. uniprot
Match: A0A6V1NPN0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NPN0_HETAK) HSP 1 Score: 110 bits (275), Expect = 2.850e-27 Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 1 Query: 1 AAARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTVTVAFMAWAPSKAGCNARAGDDAAEARFFPVERLPSMAFDHLKVITDSWARCR 264
A A REL+EETGV + Q GA+GDPGRDPRG TVTVAFMA APS+A A+A DDA + +FP+ LPS+AFDHLK++ ++W RC+
Sbjct: 89 ACAARELQEETGVAGLPLAQVGAFGDPGRDPRGPTVTVAFMALAPSRA-IGAKAADDAVDEEWFPLTNLPSLAFDHLKILEEAWQRCK 175
BLAST of mRNA_Ecto-sp13_S_contig10037.57.1 vs. uniprot
Match: A0A3M2HH92_9BACT (NUDIX hydrolase n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M2HH92_9BACT) HSP 1 Score: 98.6 bits (244), Expect = 1.390e-23 Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 1 AAARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTVTVAFMAWAPSKAGCNARAGDDAAEARFFPVERLPSMAFDHLKVITDSWARCR 264
AAA+REL+EETGV N + Q GA+GDPGRDPRGH +T+ + P A + RAGDDA A +FPV+RLP +AFDH ++I+ R R
Sbjct: 57 AAAQRELQEETGVENIPLEQLGAFGDPGRDPRGHVITIVYGGILPEDASSSLRAGDDARRAEWFPVDRLPPLAFDHDQIISRCLPRLR 144
BLAST of mRNA_Ecto-sp13_S_contig10037.57.1 vs. uniprot
Match: I2CQQ6_NANGC (Nudix hydrolase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CQQ6_NANGC) HSP 1 Score: 95.5 bits (236), Expect = 1.300e-21 Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 1 AAARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTVTVAFMAWAPSKAGCNARAGDDAAEARFFPVERLPSMAFDHLKVITDSWAR 258
+AA REL EET + + + Q G YG PGRDPRGHT+TVA+ A+ S G ARAGDDA EA+FF LP +AFDH K+I ++W R
Sbjct: 101 SAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEG--ARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMR 184
BLAST of mRNA_Ecto-sp13_S_contig10037.57.1 vs. uniprot
Match: A0A7C5ACX2_9BACT (NUDIX hydrolase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5ACX2_9BACT) HSP 1 Score: 94.0 bits (232), Expect = 1.890e-21 Identity = 48/85 (56.47%), Postives = 60/85 (70.59%), Query Frame = 1 Query: 4 AARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTVTVAFMAWAPSKAGCNARAGDDAAEARFFPVERLPSMAFDHLKVITDSWAR 258
AARREL EETG+ +VQ GAYG PGRDPRGHTV+VAF+ + + AGDDAA ARF V LP++AFDH +++ D+ AR
Sbjct: 66 AARRELAEETGLAANPLVQVGAYGAPGRDPRGHTVSVAFLGYV-GNGEASPHAGDDAAAARFHDVAALPALAFDHREILRDALAR 149
BLAST of mRNA_Ecto-sp13_S_contig10037.57.1 vs. uniprot
Match: A0A7S2XUX9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUX9_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 3.120e-21 Identity = 57/136 (41.91%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 1 AAARRELEEETGVTNRTMVQTGAYGDPGRDP-RGHTVTVAFMAWAPSKAGCNARAGDDAAEARFFPVERLPSMAFDHLKVITDSWARCRFGATNDGGGVSVEDKASGQALGEYSTSSTSGAAGSVGAEALGLLVPT 405
A + RELEEET ++ MVQ GA+ DPGRDP RGH +TVA+ A AP K+ +A DDAA+A +F V RLP +AFDH ++ +WAR +F T + D+ + + L +Y +G E L + PT
Sbjct: 77 ACSARELEEETSISGLPMVQVGAFADPGRDPTRGHVLTVAYAACAPYKS-IGVKAQDDAADAEWFQVSRLPPLAFDHFDIMKVAWARIQFTTTPGKSLIEAIDRGTLKPLAKYDCEKIG-----IGLEQLQQITPT 206
BLAST of mRNA_Ecto-sp13_S_contig10037.57.1 vs. uniprot
Match: A0A850AG89_9BACT (NUDIX hydrolase n=1 Tax=Calditrichaceae bacterium TaxID=2614252 RepID=A0A850AG89_9BACT) HSP 1 Score: 90.9 bits (224), Expect = 1.340e-20 Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 1 AAARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTVTVAFMAWAPSKAGCNARAGDDAAEARFFPVERLPSMAFDHLKVITDSWARCR 264
AAARREL EETG N + Q GAYGDPGRDPRGHTVT+ + + AG DA +A++FP E+LP +AFDH ++I + R
Sbjct: 57 AAARRELREETGQENLPLRQLGAYGDPGRDPRGHTVTIVYGGVIETDKPVQPVAGSDAGQAQWFPAEQLPELAFDHARIIAERLGELR 144
BLAST of mRNA_Ecto-sp13_S_contig10037.57.1 vs. uniprot
Match: A0A7V6LA33_9BACT (NUDIX hydrolase n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7V6LA33_9BACT) HSP 1 Score: 90.5 bits (223), Expect = 2.050e-20 Identity = 46/89 (51.69%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 4 AARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTVTVAFMAWAPSKAGCNARAGDDAAEARFFPVERLPSMAFDHLKVITDSWARCRFG 270
AA REL+EETG+ ++Q GAYG PGRDPRGHTV+V + A S+ +AGDDAAEA +F ++ LP +AFDH ++ITD+ + G
Sbjct: 57 AALRELKEETGIVGLDLIQVGAYGKPGRDPRGHTVSVVYTAILDSEP--EYQAGDDAAEAGWFTIDELPGLAFDHEEIITDAARMLKLG 143
BLAST of mRNA_Ecto-sp13_S_contig10037.57.1 vs. uniprot
Match: UPI000B525553 (NUDIX hydrolase n=1 Tax=Geofilum rhodophaeum TaxID=1965019 RepID=UPI000B525553) HSP 1 Score: 90.1 bits (222), Expect = 2.890e-20 Identity = 50/90 (55.56%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 1 AAARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTVTVAFMAWAPSKAGCNARAGDDAAEARFFPVERLPSMAFDHLKVITDSWARCRFG 270
AAARREL EETG+ ++VQ GA+G PGRDPRGHTVTVA+ PS ARAGDDA EA++F + LP +AFDH +I + R G
Sbjct: 56 AAARRELLEETGLEVDSLVQVGAFGKPGRDPRGHTVTVAYATVWPSVV--EARAGDDAREAQWFSLRALPELAFDHDAIIAAALERLALG 143
BLAST of mRNA_Ecto-sp13_S_contig10037.57.1 vs. uniprot
Match: A0A2V0PAM0_9CHLO (Nudix hydrolase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PAM0_9CHLO) HSP 1 Score: 90.1 bits (222), Expect = 8.140e-20 Identity = 50/89 (56.18%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 1 AAARRELEEETGVT---NRTMVQTGAYGDPGRDPRGHTVTVAFMAWAPSKAGCNARAGDDAAEARFFPVERLPSMAFDHLKVITDSWAR 258
AAA REL EETG+ + VQ GA+GDPGRDPRG TVTVA+ A P A A DDAA+ARFFPV LP +AFDH V+ ++ R
Sbjct: 75 AAAARELREETGLEPGPDVPFVQVGAFGDPGRDPRGWTVTVAYAALVPHDARKRVAAADDAADARFFPVNDLPPLAFDHKLVVREALRR 163 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10037.57.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10037.57.1 >prot_Ecto-sp13_S_contig10037.57.1 ID=prot_Ecto-sp13_S_contig10037.57.1|Name=mRNA_Ecto-sp13_S_contig10037.57.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=140bp AAARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTVTVAFMAWAPSKAGCback to top mRNA from alignment at Ecto-sp13_S_contig10037:3961..6039- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10037.57.1 ID=mRNA_Ecto-sp13_S_contig10037.57.1|Name=mRNA_Ecto-sp13_S_contig10037.57.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2079bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10037:3961..6039- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10037:3961..6039- >mRNA_Ecto-sp13_S_contig10037.57.1 ID=mRNA_Ecto-sp13_S_contig10037.57.1|Name=mRNA_Ecto-sp13_S_contig10037.57.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=420bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10037:3961..6039- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |