mRNA_Ecto-sp13_S_contig10027.45.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10027.45.1 vs. uniprot
Match: D8LND6_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND6_ECTSI) HSP 1 Score: 253 bits (645), Expect = 1.110e-82 Identity = 121/139 (87.05%), Postives = 125/139 (89.93%), Query Frame = 1 Query: 28 ELEVPPPEGYTGNSNKEELCLEYINNFRVQFDKLYPGRRRLFLTAPNEHGVEKFVCTTLRPTLLPYREIYDLEKCSEFVTNFLHYEPLERPTEPPSFLPSPGQVLEWTVGDSFDFAMVLCSLLLGAGYDAYVVYGTAPG 444 EL+ P S K ELCLEYINNFRVQFDKLYP RRRLFLTAPNE+GVEKFVCTTLRPTLLPYR+IYDL+KCSEFVTNFLHYEPLERPTEPPSFLPSPGQVLEW VGD FDFAMVLCSLLLGAGYDAYVVYGTAPG Sbjct: 7 ELDGAPFSAEGLKSTKRELCLEYINNFRVQFDKLYPCRRRLFLTAPNEYGVEKFVCTTLRPTLLPYRDIYDLDKCSEFVTNFLHYEPLERPTEPPSFLPSPGQVLEWAVGDCFDFAMVLCSLLLGAGYDAYVVYGTAPG 145
BLAST of mRNA_Ecto-sp13_S_contig10027.45.1 vs. uniprot
Match: A0A7S2FQ16_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FQ16_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.350e-63 Identity = 92/132 (69.70%), Postives = 113/132 (85.61%), Query Frame = 1 Query: 46 PEGYTGNSNKEELCLEYINNFRVQFDKLYPGRRRLFLTAPNEHGVEKFVCTTLRPTLLPYREIYDLEKCSEFVTNFLHYEPLERPTEPPSFLPSPGQVLEWTVGDSFDFAMVLCSLLLGAGYDAYVVYGTAP 441 PE YT NSNKEELCLE++ +F +++LYP R+ LFL PNE+GV+KFVCTT+RPTLLP+RE+YDLEK +EFV+N+L YEPLE PTEPPS LPSP QV+ W+VGDS+DFA++L S LLGAGYDA+VV GTAP Sbjct: 34 PESYTCNSNKEELCLEFVRHFNANYERLYPERKPLFLICPNEYGVDKFVCTTVRPTLLPFREVYDLEKTAEFVSNYLDYEPLEIPTEPPSCLPSPAQVIGWSVGDSYDFAVLLTSFLLGAGYDAFVVSGTAP 165
BLAST of mRNA_Ecto-sp13_S_contig10027.45.1 vs. uniprot
Match: F0YMP4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMP4_AURAN) HSP 1 Score: 189 bits (479), Expect = 3.570e-53 Identity = 89/132 (67.42%), Postives = 100/132 (75.76%), Query Frame = 1 Query: 46 PEGYTGNSNKEELCLEYINNFRVQFDKLYPGRRRLFLTAPNEHGVEKFVCTTLRPTLLPYREIYDLEKCSEFVTNFLHYEPLERPTEPPSFLPSPGQVLEWTVGDSFDFAMVLCSLLLGAGYDAYVVYGTAP 441 P YT +S KE LCLEY+ +FR +F L+P RR LFL NE G+ KFVCTTLRPTLLPYREIYD + FV N+LHYEPLE P E P LPSP QVL+W VGD FDFA++LCS LLGAGYDAYVVYG AP Sbjct: 2 PSTYTSDSKKEALCLEYVRHFREKFTALFPDRRELFLMPRNEWGLPKFVCTTLRPTLLPYREIYDFGTLAHFVANYLHYEPLESPNEYPEVLPSPTQVLDWKVGDCFDFAVLLCSYLLGAGYDAYVVYGYAP 133
BLAST of mRNA_Ecto-sp13_S_contig10027.45.1 vs. uniprot
Match: A0A7S1XKS5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKS5_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.230e-51 Identity = 78/132 (59.09%), Postives = 102/132 (77.27%), Query Frame = 1 Query: 46 PEGYTGNSNKEELCLEYINNFRVQFDKLYPGRRRLFLTAPNEHGVEKFVCTTLRPTLLPYREIYDLEKCSEFVTNFLHYEPLERPTEPPSFLPSPGQVLEWTVGDSFDFAMVLCSLLLGAGYDAYVVYGTAP 441 PE Y NS KE LCLEY+ NF+ QF +L+P R+ L++ APNE GVEK VCTT+RPT LPY+ +YD++ + F+++FL YE L+ T+PP LPS +VLEW VGD+FD +++L S L+GAGYDAYVVYGTAP Sbjct: 36 PESYGANSIKEALCLEYVANFQDQFKELFPERKDLYIVAPNECGVEKMVCTTVRPTQLPYKSLYDMQSAALFLSHFLRYETLQDATKPPQVLPSSTRVLEWGVGDAFDMSVLLASYLIGAGYDAYVVYGTAP 167
BLAST of mRNA_Ecto-sp13_S_contig10027.45.1 vs. uniprot
Match: A0A7S3Y6U6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6U6_HETAK) HSP 1 Score: 158 bits (399), Expect = 1.880e-47 Identity = 71/110 (64.55%), Postives = 88/110 (80.00%), Query Frame = 1 Query: 70 NKEELCLEYINNFRVQFDKLYPGRRRLFLTAPNEHGVEKFVCTTLRPTLLPYREIYDLEKCSEFVTNFLHYEPLERPTEPPSFLPSPGQVLEWTVGDSFDFAMVLCSLLL 399 NKE LCLEY+ NFR +F + YP ++ L+LTA NE VEKF+CTT+RPT LP++E+Y+LE C+EFV FLHYEPLE PT PPS LPS QVL+W VGDSFDFA++L S L+ Sbjct: 1 NKELLCLEYVKNFRTKFHECYPNKKDLYLTARNEFNVEKFLCTTIRPTQLPFKEVYELEDCAEFVARFLHYEPLENPTAPPSCLPSSTQVLKWGVGDSFDFAVLLTSYLI 110
BLAST of mRNA_Ecto-sp13_S_contig10027.45.1 vs. uniprot
Match: A0A7S2JPC8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JPC8_9EUKA) HSP 1 Score: 164 bits (415), Expect = 3.210e-47 Identity = 76/132 (57.58%), Postives = 92/132 (69.70%), Query Frame = 1 Query: 46 PEGYTGNSNKEELCLEYINNFRVQFDKLYPGRRRLFLTAPNEHGVEKFVCTTLRPTLLPYREIYDLEKCSEFVTNFLHYEPLERPTEPPSFLPSPGQVLEWTVGDSFDFAMVLCSLLLGAGYDAYVVYGTAP 441 PE Y N+ KEEL L+YI + QFD ++P RRR L NE G+ KF+CT LRPT LPY E+YDL+KC+ FV +++ YEPLE + P+ +PSP L W GD FD AMVLCSLLLG GYDAYVV G AP Sbjct: 24 PESYRMNTPKEELMLDYIRKYESQFDNMHPKRRRPMLAPRNECGMRKFICTNLRPTQLPYPEVYDLKKCASFVADYIRYEPLELAGQLPAHMPSPSATLSWQAGDCFDIAMVLCSLLLGVGYDAYVVSGYAP 155
BLAST of mRNA_Ecto-sp13_S_contig10027.45.1 vs. uniprot
Match: A0A3R6Y8A9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6Y8A9_9STRA) HSP 1 Score: 161 bits (408), Expect = 9.470e-47 Identity = 80/147 (54.42%), Postives = 97/147 (65.99%), Query Frame = 1 Query: 1 TKHLHTDAEELEVPPPEGYTGNSNKEELCLEYINNFRVQFDKLYPG----RRRLFLTAPNEHGVEKFVCTTLRPTLLPYREIYDLEKCSEFVTNFLHYEPLERPTEPPSFLPSPGQVLEWTVGDSFDFAMVLCSLLLGAGYDAYVVY 429 TK + +E P Y+ NSNKE LCLEY+ NFR QFD L R L+L PNE G+ KFVCTTLRPTLLP+ ++YD++K + FV+ + YEPL P PP+ LPSP VL W GDSFD A VL S L+GAGYDAYVV+ Sbjct: 123 TKQRRLEDHVIESVTPSSYSTNSNKELLCLEYVANFRKQFDDLMDASDICRPPLYLCPPNERGIPKFVCTTLRPTLLPFLDLYDMDKLATFVSGLIEYEPLVDPCAPPACLPSPSAVLAWQAGDSFDMANVLASFLIGAGYDAYVVH 269
BLAST of mRNA_Ecto-sp13_S_contig10027.45.1 vs. uniprot
Match: A0A835YIG5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIG5_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.110e-46 Identity = 78/109 (71.56%), Postives = 88/109 (80.73%), Query Frame = 1 Query: 115 QFDKLYPGRRRLFLTAPNEHGVEKFVCTTLRPTLLPYREIYDLEKCSEFVTNFLHYEPLERPTEPPSFLPSPGQVLEWTVGDSFDFAMVLCSLLLGAGYDAYVVYGTAP 441 QFD L+P R LFLT PNE GV KFVC+TLRPT LPYR+IYDL C +F+ ++LHYEPLE P PP+ LPSP QVL WT GDSFDFA+VLCS LLGAGYDA+V YGTAP Sbjct: 11 QFDALHPERGHLFLTVPNEFGVTKFVCSTLRPTELPYRKIYDLNNCVDFIAHYLHYEPLETPCAPPACLPSPAQVLAWTYGDSFDFAVVLCSFLLGAGYDAFVAYGTAP 119
BLAST of mRNA_Ecto-sp13_S_contig10027.45.1 vs. uniprot
Match: K3WB99_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB99_GLOUD) HSP 1 Score: 171 bits (432), Expect = 1.770e-46 Identity = 80/147 (54.42%), Postives = 97/147 (65.99%), Query Frame = 1 Query: 1 TKHLHTDAEELEVPPPEGYTGNSNKEELCLEYINNFRVQFDKLYPGRRRLFLTAPNEHGVEKFVCTTLRPTLLPYREIYDLEKCSEFVTNFLHYEPLERPTEPPSFLPSPGQVLEWTVGDSFDFAMVLCSLLLGAGYDAYVVYGTAP 441 TK + PP YT N KE LCLEY+ NF+ QF+ ++P R+ L+L PNEHG K VCTTLRPTLLPYR++YD + + F+ L YEPL P PP LPSPG L+ GDSFDFA+V S L+GAGYDAYVV+G AP Sbjct: 51 TKQWRLEDASANTPPLPSYTSNCTKELLCLEYVANFQRQFEYMFPARKPLYLFPPNEHGTPKLVCTTLRPTLLPYRDLYDAQALARFLAGVLEYEPLADPLSPPKCLPSPGFTLKARAGDSFDFAVVFASFLIGAGYDAYVVHGIAP 197
BLAST of mRNA_Ecto-sp13_S_contig10027.45.1 vs. uniprot
Match: A0A8J2SE21_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SE21_9STRA) HSP 1 Score: 169 bits (429), Expect = 3.120e-46 Identity = 81/138 (58.70%), Postives = 96/138 (69.57%), Query Frame = 1 Query: 28 ELEVPPPEGYTGNSNKEELCLEYINNFRVQFDKLYPGRRRLFLTAPNEHGVEKFVCTTLRPTLLPYREIYDLEKCSEFVTNFLHYEPLERPTEPPSFLPSPGQVLEWTVGDSFDFAMVLCSLLLGAGYDAYVVYGTAP 441 +L PP E Y +S KE LCLEY+ FR +F L+P RR LFL NE GV KFVCTT+RPTLLP+ ++Y+ + FV NFL YEPLE P PS LPSP QV++W GD FDFA++LCS L G GYDAYVV G AP Sbjct: 19 DLTDPPSESYASDSKKEALCLEYVRQFRQKFVALFPKRRELFLAPQNEFGVAKFVCTTVRPTLLPFDQLYEARPLATFVANFLQYEPLEAPDAFPSVLPSPTQVVQWKCGDCFDFAVLLCSWLQGNGYDAYVVCGYAP 156 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10027.45.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10027.45.1 >prot_Ecto-sp13_S_contig10027.45.1 ID=prot_Ecto-sp13_S_contig10027.45.1|Name=mRNA_Ecto-sp13_S_contig10027.45.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=149bp TKHLHTDAEELEVPPPEGYTGNSNKEELCLEYINNFRVQFDKLYPGRRRLback to top mRNA from alignment at Ecto-sp13_S_contig10027:448..2155- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10027.45.1 ID=mRNA_Ecto-sp13_S_contig10027.45.1|Name=mRNA_Ecto-sp13_S_contig10027.45.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1708bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10027:448..2155- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10027:448..2155- >mRNA_Ecto-sp13_S_contig10027.45.1 ID=mRNA_Ecto-sp13_S_contig10027.45.1|Name=mRNA_Ecto-sp13_S_contig10027.45.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=447bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10027:448..2155- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |