Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 555 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 324 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462500.8678374-CDS-Ecto-sp13_S_contig10017:5448..5772 | 1681462500.8678374-CDS-Ecto-sp13_S_contig10017:5448..5772 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10017 5449..5772 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462500.8766103-UTR-Ecto-sp13_S_contig10017:5772..6002 | 1681462500.8766103-UTR-Ecto-sp13_S_contig10017:5772..6002 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig10017 5773..6002 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10017.38.1 >prot_Ecto-sp13_S_contig10017.38.1 ID=prot_Ecto-sp13_S_contig10017.38.1|Name=mRNA_Ecto-sp13_S_contig10017.38.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=108bp
VSSPLVHRSHGAIRVQLQSVILKHLIVSKTFVLLLLLSSLYEALRDVRDI
AGHTPPSFLVPSEDRFGRASMRSCKKRRPHTKQVLTRNSSGTFTPRDPRY
SSPNFGS* back to topmRNA from alignment at Ecto-sp13_S_contig10017:5449..6002+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10017.38.1 ID=mRNA_Ecto-sp13_S_contig10017.38.1|Name=mRNA_Ecto-sp13_S_contig10017.38.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=554bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10017:5449..6002+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTTTCTTCTCCTTTGGTTCATCGCTCACATGGAGCAATTCGCGTACAGCT
CCAATCCGTGATACTGAAGCACTTAATAGTGTCGAAGACTTTTGTTCTTT
TGTTGTTGTTGTCTTCACTCTACGAAGCTCTAAGAGATGTTCGAGATATT
GCCGGCCATACCCCTCCTTCCTTCCTAGTGCCTTCTGAGGATCGATTTGG
TCGTGCCTCTATGCGTTCTTGCAAAAAACGCAGACCACACACAAAACAGG
TCCTTACACGCAATAGCTCAGGAACATTTACACCTCGAGACCCGCGGTAC
AGCAGTCCCAACTTCGGTTCCTGACAACTGTCTTGTAGCACATGCAGAAG
AGAGCGACAACAGCAGCGCACGAAGCTCGTATCAGGCCATCCCATGGAGC
GTGGGCACACACGAAGAGTTCACTACCAAAAGGACGCACGAAACACAGCT
GGTACATATGTAGTCCGAAGACTCGCCGCTCCCCGCTTCAGCAGGTGACC
TTGGAGAGTCCCCTCACGAGCGGGGATTCTTGCTGTCCGATGATCAACAA
CGTG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10017:5449..6002+ >mRNA_Ecto-sp13_S_contig10017.38.1 ID=mRNA_Ecto-sp13_S_contig10017.38.1|Name=mRNA_Ecto-sp13_S_contig10017.38.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=324bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10017:5449..6002+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTTTCTTCTCCTTTGGTTCATCGCTCACATGGAGCAATTCGCGTACAGCT
CCAATCCGTGATACTGAAGCACTTAATAGTGTCGAAGACTTTTGTTCTTT
TGTTGTTGTTGTCTTCACTCTACGAAGCTCTAAGAGATGTTCGAGATATT
GCCGGCCATACCCCTCCTTCCTTCCTAGTGCCTTCTGAGGATCGATTTGG
TCGTGCCTCTATGCGTTCTTGCAAAAAACGCAGACCACACACAAAACAGG
TCCTTACACGCAATAGCTCAGGAACATTTACACCTCGAGACCCGCGGTAC
AGCAGTCCCAACTTCGGTTCCTGA back to top
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