mRNA_Ecto-sp13_S_contig100169.36.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig100169.36.1 vs. uniprot
Match: D7FHD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHD1_ECTSI) HSP 1 Score: 115 bits (288), Expect = 1.330e-28 Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 1 Query: 1 IFADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPFVVS 171 IFADRLLLNGALSESLTRLIVPAYRERI+RHEAGHFLVAYLLGCPVQACLLDPFV+ Sbjct: 263 IFADRLLLNGALSESLTRLIVPAYRERIIRHEAGHFLVAYLLGCPVQACLLDPFVLG 319
BLAST of mRNA_Ecto-sp13_S_contig100169.36.1 vs. uniprot
Match: A0A7S0HJE3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HJE3_9EUKA) HSP 1 Score: 78.6 bits (192), Expect = 1.250e-15 Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 1 Query: 10 DRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPF 162 DRLLL GA E++T+L+ PAY +++HEAGHFLVAYLLGCPV+A LLD F Sbjct: 242 DRLLLRGAAGEAVTKLVQPAYARTVLQHEAGHFLVAYLLGCPVEAVLLDGF 292
BLAST of mRNA_Ecto-sp13_S_contig100169.36.1 vs. uniprot
Match: W7TJA2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJA2_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.510e-15 Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 4 FADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPFVVSWW 177 F DR LL G ++L R+++P Y+ERI+RHEAGHFL+A+LLGCPVQ C+L P W Sbjct: 326 FVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVLRPVFNGRW 383
BLAST of mRNA_Ecto-sp13_S_contig100169.36.1 vs. uniprot
Match: A0A7S4MF46_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MF46_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 2.530e-15 Identity = 30/53 (56.60%), Postives = 43/53 (81.13%), Query Frame = 1 Query: 4 FADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPF 162 F DRL++NGA+ E+ R+++P Y +I++HEAGHFL AYLLGCPV+ C+L P+ Sbjct: 298 FLDRLIVNGAVFETAVRMVMPKYGRKILKHEAGHFLCAYLLGCPVEGCVLSPW 350
BLAST of mRNA_Ecto-sp13_S_contig100169.36.1 vs. uniprot
Match: A0A7S3FEW8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FEW8_9EUKA) HSP 1 Score: 76.3 bits (186), Expect = 2.540e-15 Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 1 Query: 10 DRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLD 156 DR LL GAL ES+TR + P Y + HEAGHFL AYLLGCP++ACLLD Sbjct: 2 DRALLRGALGESITRAVKPGYARTVREHEAGHFLAAYLLGCPIEACLLD 50
BLAST of mRNA_Ecto-sp13_S_contig100169.36.1 vs. uniprot
Match: A0A7S2ECE3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ECE3_TRICV) HSP 1 Score: 77.4 bits (189), Expect = 2.880e-15 Identity = 31/53 (58.49%), Postives = 43/53 (81.13%), Query Frame = 1 Query: 4 FADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPF 162 F DRLL+NGA+ E+ R ++P Y ++I++HEAGHFL AYLLGCPV+ C+L P+ Sbjct: 251 FMDRLLVNGAVFETAMRTVMPKYGKKILKHEAGHFLCAYLLGCPVEGCVLSPW 303
BLAST of mRNA_Ecto-sp13_S_contig100169.36.1 vs. uniprot
Match: A0A4D9D7F6_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7F6_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 3.470e-15 Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = 1 Query: 4 FADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDP 159 F DR LL G ++L R+++P Y+ERI+RHEAGHFL+A+LLGCPVQ C+L P Sbjct: 326 FVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVLRP 377
BLAST of mRNA_Ecto-sp13_S_contig100169.36.1 vs. uniprot
Match: A0A7S4BC64_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BC64_CHRCT) HSP 1 Score: 77.0 bits (188), Expect = 4.680e-15 Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 1 Query: 7 ADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPFVVS 171 ADRL L G E L R + P Y++ +++HEAGHFLVAYLLGCP++ACLLDP + Sbjct: 230 ADRLALGGVGIEVLARTVNPNYQKTVIKHEAGHFLVAYLLGCPIEACLLDPLAAA 284
BLAST of mRNA_Ecto-sp13_S_contig100169.36.1 vs. uniprot
Match: A0A7S2WUW6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUW6_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 8.810e-15 Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 1 Query: 10 DRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPF 162 DRL+ GAL E+ R + P YRE+++RHEA HFLVAYLLGCPV++C++ F Sbjct: 265 DRLVFQGALFETAYRAVAPQYREKVIRHEAAHFLVAYLLGCPVESCIISAF 315
BLAST of mRNA_Ecto-sp13_S_contig100169.36.1 vs. uniprot
Match: A0A835YLP7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP7_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.020e-14 Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 1 Query: 10 DRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPFVV 168 DR++L GAL ES+ R+I P Y+ +I+RHEAGHFL+AYLLG + CLLDP+ V Sbjct: 202 DRIVLKGALFESIARIINPTYKAKIIRHEAGHFLLAYLLGLGISGCLLDPWQV 254 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig100169.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig100169.36.1 >prot_Ecto-sp13_S_contig100169.36.1 ID=prot_Ecto-sp13_S_contig100169.36.1|Name=mRNA_Ecto-sp13_S_contig100169.36.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp IFADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLback to top mRNA from alignment at Ecto-sp13_S_contig100169:142..318+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig100169.36.1 ID=mRNA_Ecto-sp13_S_contig100169.36.1|Name=mRNA_Ecto-sp13_S_contig100169.36.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=177bp|location=Sequence derived from alignment at Ecto-sp13_S_contig100169:142..318+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig100169:142..318+ >mRNA_Ecto-sp13_S_contig100169.36.1 ID=mRNA_Ecto-sp13_S_contig100169.36.1|Name=mRNA_Ecto-sp13_S_contig100169.36.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=177bp|location=Sequence derived from alignment at Ecto-sp13_S_contig100169:142..318+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |