mRNA_Ecto-sp13_S_contig10010.28.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Match: A0A6H5KVK2_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK2_9PHAE) HSP 1 Score: 546 bits (1408), Expect = 1.220e-193 Identity = 308/345 (89.28%), Postives = 314/345 (91.01%), Query Frame = 1 Query: 1 MLLNLGGPLLASSHAALYTSVPSYGRLPPGVESAARMNAITQQSLGSSXXXXXXXXXXXXXXXPSSASSGPRLLHPSGSGPEGVPSSLFTFQPPRATRIERPTEVAPGASEGGHNGGSEDGAGQSAAAVITKAVASANEEALHVRLVEESDLPDVSALLAEVFEPNILIDPAELRSESSVERLEKANKYLKEMAYKK-----------------------ILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRSSGSARATSAVPELGGDGAGDGGGGDAGDVVAVVELCLRQPDGWFPINGPFVPMTGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWG 966
MLLNLGGPLLASSHAALY SVPSYGRLPPGVESAARMNAITQQ LGSSXXXXXXXXXXXXXX PSSASSGPRLLHPSGSGPEGVPSSLFTFQPPRAT IERPTEVAPG +EGGHN GSEDGAG+SAAAVITKAVASA+EEALHV+LVEESDLPDVSALLAEVFEPNILIDPAELRSESSVERLEKANKYLKEMAYKK ILRSIKSRCGKRLTRGDFALTSDALVLAVRDSR +GSARATSAVPELGGDGAGD GGGDAGD+VAVVELCLRQPDGWFPINGPFVPMTGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWG
Sbjct: 1 MLLNLGGPLLASSHAALYASVPSYGRLPPGVESAARMNAITQQRLGSSXXXXXXXXXXXXXXRPSSASSGPRLLHPSGSGPEGVPSSLFTFQPPRATPIERPTEVAPGTTEGGHNSGSEDGAGRSAAAVITKAVASADEEALHVKLVEESDLPDVSALLAEVFEPNILIDPAELRSESSVERLEKANKYLKEMAYKKVGGTHPREERECPLVVWSDTSCQILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRPNGSARATSAVPELGGDGAGDAGGGDAGDIVAVVELCLRQPDGWFPINGPFVPMTGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWG 345
BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Match: D7FVP3_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVP3_ECTSI) HSP 1 Score: 256 bits (653), Expect = 3.480e-82 Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 1 Query: 577 MAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRSSGSARATSAVPELGGDGAGDGGGGDAGDVVAVVELCLRQPDGWFPINGPFVPMTGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWG 966
MAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRDSR +GSARATSAVPELGGDGAGDGGGGDAGD+VAVVELCLRQPDGW PINGPFVPMTGWEPYMCNLAV EKYRGNGYGKQLVRLCEGVAKKHWG
Sbjct: 1 MAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRPNGSARATSAVPELGGDGAGDGGGGDAGDIVAVVELCLRQPDGWLPINGPFVPMTGWEPYMCNLAVTEKYRGNGYGKQLVRLCEGVAKKHWG 130
BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Match: D7FVP4_ECTSI (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVP4_ECTSI) HSP 1 Score: 229 bits (584), Expect = 4.480e-69 Identity = 161/348 (46.26%), Postives = 199/348 (57.18%), Query Frame = 1 Query: 1 MLLNLGGPLLASSHAALYTSVPSYGRL-PPGVESAARMNAITQQSLGSSXXXXXXXXXXXXXXXPSSASSGPRLLHPSGSGPEGVPSSLFTFQPPRATRIERPTEVAPGASEGGHNGGSEDGAGQSAAAVITKAVASANEEALHVRLVEESDLPDVSALLAEVFEPNILIDPAELRSESSV---ERLEKANKYLKEMAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRSSGSARATSAVPELGGDGAGDGGGGD---AGDVVAVVELCLRQPDGWFPINGPFV-------------------PMTGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWG 966
MLL +GGPL+ S++A L+ + S G L PPG Q G++ P+SASSGPRLLHP GSGP+GVPSSLFTFQP R T + P E GG D A S+A V + E L L++ESDLPDVSALL EVFEP +++ E SV ++ N Y+K +AY +IL S++SRCG RLTRGDF +SDALVLAVR S+ +++ V + DG DGG G A ++VAVVEL +R+PDG P+N PF P W+PYMCNLAVAE+YRGNGYGKQLVRLCE VAK WG
Sbjct: 1 MLLTVGGPLV-SAYATLHPLLLSAGTLNPPG------------QHTGTTSITATGDCTRRQQTRPNSASSGPRLLHPRGSGPDGVPSSLFTFQP-RTTPKKYPQEKK-------RAGG--DSASTSSAPVAGE------ENVLRAGLMDESDLPDVSALLVEVFEPGVVLADGEFTGLESVILGAPIDMTNNYMKAVAYNEILYSLRSRCGNRLTRGDFDRSSDALVLAVRGPPSTSGKSSSTPVTQ---DGDADGGVGXXXXAAELVAVVELTIRKPDGSLPLNWPFPAPWRREARDLIVPLLYIEKPPEQWQPYMCNLAVAEEYRGNGYGKQLVRLCEHVAKNSWG 316
BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Match: A0A836CNC1_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNC1_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.990e-13 Identity = 60/195 (30.77%), Postives = 88/195 (45.13%), Query Frame = 1 Query: 412 NEEALHVRLVEESDLPDVSALLAEVFEPNILIDPAELRSESSVERLE----KANKYLKEMAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRSSGSARATSAVPELGGDGAGDGGGGDAGDVVAVVELCLRQPDGWFPINGPFVPM-------TGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHW 963
+E L + L+E+ D+ + LL F + + E V+ L N YL+ +Y +IL IK R G++L + A++L V D ++ ++AVVEL LR PDG P N P + EPY+CNLAV+E++RG G GKQLVRL E + + W
Sbjct: 23 SERNLVLGLIEDRDVAQAAELLVNCFPFEVSLSTEAGFKEWEVQVLRIPVGLMNAYLRGFSYYEILLGIKLRMGEQLLNPQIDASGSAMILGVADPSTN--------------------------QIIAVVELELRIPDGTLPGNWPLPRFIKGQSAESHSEPYLCNLAVSERWRGQGIGKQLVRLSEHIVRNCW 191
BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Match: A0A4D9DEA7_9STRA (N-acetyltransferase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEA7_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.580e-7 Identity = 32/71 (45.07%), Postives = 38/71 (53.52%), Query Frame = 1 Query: 778 VVAVVELCLRQPDGWFPINGPFVPM---------TGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHW 963
+VAVVELCLR+PD G +P PY+CNLAV+ YRG G GK LVR+ E V W
Sbjct: 125 LVAVVELCLRRPD------GNLIPSIRSSSLRYDAACRPYLCNLAVSPLYRGQGLGKALVRIAENVVSACW 189
BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Match: B7FSR9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSR9_PHATC) HSP 1 Score: 58.9 bits (141), Expect = 4.030e-6 Identity = 64/206 (31.07%), Postives = 99/206 (48.06%), Query Frame = 1 Query: 418 EALHVRLVEESDLPDVSALLAEVFEPNILIDPAELRS-ESSVER--LEKANKYLKEMAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRD-SRSSGSARAT--SAVPELGGDGAGDGGGGDAG-DVVAVVELCLRQPDGWFPINGPFVPM-----TGW-----------EPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWG 966
+ + L EE+DLPDVS + F + + ++ + E + R +E N Y +A+ ++L ++SR R+ G SD + ++ SR+ + AT S V LG AG+ D DV+A VEL L+ D P + P++ W +PY+ NL VAE+YRG G G+ LVR E ++K WG
Sbjct: 94 DVFELALAEETDLPDVSRFIVTSFGADAIRVSQDMSTFEGMLMRPAVELVNGYSGIVAFAEVLAGLRSRLKTRIANG-----SDLSLPELKGRSRTEQISEATNDSIVLVLGRRHAGN----DWHIDVIASVELRLQLCDAKIPFSLPWLDRIERTAASWIGLGKNHARDLQPYLGNLCVAERYRGRGIGRALVRCVEDISKTKWG 290 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10010.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10010.28.1 >prot_Ecto-sp13_S_contig10010.28.1 ID=prot_Ecto-sp13_S_contig10010.28.1|Name=mRNA_Ecto-sp13_S_contig10010.28.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=323bp MLLNLGGPLLASSHAALYTSVPSYGRLPPGVESAARMNAITQQSLGSSSSback to top mRNA from alignment at Ecto-sp13_S_contig10010:3594..5806+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10010.28.1 ID=mRNA_Ecto-sp13_S_contig10010.28.1|Name=mRNA_Ecto-sp13_S_contig10010.28.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2213bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10010:3594..5806+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10010:3594..5806+ >mRNA_Ecto-sp13_S_contig10010.28.1 ID=mRNA_Ecto-sp13_S_contig10010.28.1|Name=mRNA_Ecto-sp13_S_contig10010.28.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=969bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10010:3594..5806+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |