mRNA_Ecto-sp13_S_contig1001.27.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1001.27.1 vs. uniprot
Match: A0A6H5L2P2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P2_9PHAE) HSP 1 Score: 1011 bits (2613), Expect = 0.000e+0 Identity = 530/605 (87.60%), Postives = 550/605 (90.91%), Query Frame = 1 Query: 1 DSSTMQVVYDFSNSAIALRRQFGAGFTIGRILDLQLAFEALHGRFGADVVTVLRAFGQPALYNDSVVRALSCEEASTMRRPIDMAILGLAAQPVISLAKVTESAVLSLSKKGQEDIVLEASQRMTEFAMSSWSQDTRRVAFRNHGSCWGGGVGRILTSFDLKQVFAHPYHIVYNKFNATYALMAREKVGLSAPSRHALSSDATPAIFDDTDPTYALLSALDSLKQSDGVARDPNSPHEILKLIPEEFLEEHLTESHVQNLQDLNELVLDEGRRPYATLHGRGKLFLCSDEGVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPEHAASVLLLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKADQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTNVTLGDAMASATNAGNKVQRQRAGAPIFDTIVALERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTRIPHDSGLQQAGTDPEDAAFLLKHAYATERIKQYY 1815 D + +VVYDFSNSAIALRRQFGAGFTIGRILDLQLA EALHG FGAD+VTVL AFGQPA YND+ RALSCEEASTMRRPID LGLAAQPVISLAKVTESA+LSLSK+GQ+DIVLEASQRMTEFAMSS QDTRRVAFRNHGSC GGGVGRILTSFDLKQ ARE+ GLSAPSR ALSS+ATPAIFDDT+PT SALDS KQSDGVA+DPNSPHEILK IPEEFLEE+LTESH+QNLQDLNELVLDEGRRPYATL GRGKLFLCSD+ VVVTKEHIDMVVGRLDLE KFAGDNRAGVPGQLHRISVMRSRE RRIFGVTLRIGRYF GSA LVDD+LFHVQGSPDKPE AASVL+LGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKA QHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTT+VTLGDAMASATNAGNK+QRQRAGAPIFDTIV LERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTRIPHDSGLQQAG DPED AFLLKHAYA E++KQYY Sbjct: 304 DQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLASEALHGHFGADIVTVLTAFGQPASYNDAAFRALSCEEASTMRRPIDATTLGLAAQPVISLAKVTESAILSLSKEGQKDIVLEASQRMTEFAMSSGRQDTRRVAFRNHGSCCGGGVGRILTSFDLKQ--------------------ARERGGLSAPSRQALSSNATPAIFDDTNPT----SALDSSKQSDGVAQDPNSPHEILKRIPEEFLEEYLTESHLQNLQDLNELVLDEGRRPYATLQGRGKLFLCSDKSVVVTKEHIDMVVGRLDLEDKFAGDNRAGVPGQLHRISVMRSREARRIFGVTLRIGRYFSGSASLVDDVLFHVQGSPDKPERAASVLVLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKAGQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMASATNAGNKIQRQRAGAPIFDTIVELERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTRIPHDSGLQQAGADPEDTAFLLKHAYAMEKLKQYY 884
BLAST of mRNA_Ecto-sp13_S_contig1001.27.1 vs. uniprot
Match: D7FII7_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII7_ECTSI) HSP 1 Score: 562 bits (1448), Expect = 1.120e-196 Identity = 287/305 (94.10%), Postives = 293/305 (96.07%), Query Frame = 1 Query: 901 MVVGRLDLEGKFAGDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPEHAASVLLLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKADQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTNVTLGDAMASATNAGNKVQRQRAGAPIFDTIVALERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTRIPHDSGLQQAGTDPEDAAFLLKHAYATERIKQYY 1815 MVVGRLDLEGKFAGDNRAGVPGQLHRISVMR REGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPE AASVL+LGKPG GKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVP+K DQHNVMKEALQNHTPQTIVVDEVS+KNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTT+VTLGDAMA ATNAGNKVQRQRAGAPIFDTIV LERGQVNKWTIV NVDLAVDAILSGKPYKV QRTRIP+DSGLQQAG D EDAAFLLKHAYA E+ KQYY Sbjct: 1 MVVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPNDSGLQQAGADHEDAAFLLKHAYAMEQTKQYY 305
BLAST of mRNA_Ecto-sp13_S_contig1001.27.1 vs. uniprot
Match: A0A6B2L513_9EUKA (AAA domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L513_9EUKA) HSP 1 Score: 268 bits (684), Expect = 4.390e-80 Identity = 162/374 (43.32%), Postives = 226/374 (60.43%), Query Frame = 1 Query: 700 NSPHEILKLIPEEFLEE-HLTESHVQNLQDLNELVLDEGRRPYATL----HGRGKLFLCSDEGVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLF--------------HVQGSP---DKPEHAA--------------SVLLLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKADQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTNVTLGDAMASATNAGNKVQRQRAGAPIFDTIVALERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTR 1713 +S EI KL+PEEF + + N++D+ +LD+GR P+A + + FL D + V HID VV ++ G+F D RAG+ G LHRIS M++ +G I+G+T RIGR F L+ DLL HV+ +P +KP S+L+LG PGSGKTT++R+I R ++ + V +VDTSNEI GDG IPH +++G +RRMMVP+ +Q NVM E LQNHTP IV+DE+ +NE A +K RGVR++ASAHG+L++L++N +LN L+GG VTLGD A TN +K+ QR PIFD ++ L +G+ NKW +V V+ AVD IL GKPY V+ R+R Sbjct: 29 SSADEIFKLLPEEFKRKVSPADFEYANIRDI---ILDKGRLPFAWIMFPNRPPQRKFLSDD--IKVDSTHIDSVVSKI---GQFGPDCRAGINGSLHRISCMKNLQGD-IYGLTFRIGRSFTKGTHLIMDLLLGNNVSLPNTKFTPPHVENNPTPLNKPFGTLGLPNPAKKSQFVGNSILVLGGPGSGKTTIIREIVRILADKFNVCVVDTSNEICGDGKIPH-SSVGLARRMMVPSVEEQGNVMVECLQNHTPDVIVIDEIGRRNEVEAAATVKQRGVRLIASAHGNLETLVKNKQLNGLIGGVETVTLGDMAAKKTNNNSKLAAQRIAPPIFDVVIELMKGEFNKWRVVTKVEEAVDKILKGKPYPVQIRSR 392
BLAST of mRNA_Ecto-sp13_S_contig1001.27.1 vs. uniprot
Match: A0A7S1EUK0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EUK0_9RHOD) HSP 1 Score: 260 bits (664), Expect = 1.860e-78 Identity = 144/317 (45.43%), Postives = 204/317 (64.35%), Query Frame = 1 Query: 802 LDEGRRPYATLHGRG---KLFLCSDEGVVVTK---EHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPEHAASVLLLGKPGSGKTTVLRDICRKIS-----QEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKADQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTNVTLGDAMASATNAGNKVQRQRAGAPIFDTIVALERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTRIP 1719 LD G RPY + G ++FL +D VVTK E ++ + +L +F GDNRAG +LHR+S +R+ + I G+T+RIGR + ++ L+DDLLF P++ + + S+L+LG+PG GKTT++RDI RK+S V ++DTSNEI GDG I H +++G + RMM+P + Q VM E LQNHTP I++DE+ K E +A +K R VR++ASAHGD +SL+ NP+L L+GG VTLGDA + A N G K + +R G+PIFD I+ L+ + N WTI+ + AVD ILS K YKV++R R P Sbjct: 6 LDYGERPYCWVSNEGTKERVFLVNDGPGVVTKVDRELLESITSKL----RFRGDNRAGFDRELHRVSAIRNTDDT-IIGLTMRIGRTYENNSYLIDDLLFQ---QPERGQ-SPSILILGRPGCGKTTIIRDIARKLSISNYSHNNNVWVIDTSNEIGGDGDIKH-SSLGLASRMMIPTGSSQKEVMVECLQNHTPDVIIIDEIGRKEEVQAAKTVKERDVRLIASAHGDFESLMRNPDLVGLIGGLQTVTLGDAASKAENDGRKTKTERGGSPIFDVIIELKPREFNTWTIIEDTKTAVDCILSNKSYKVQRRHRNP 312
BLAST of mRNA_Ecto-sp13_S_contig1001.27.1 vs. uniprot
Match: A0A6V2IJU1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2IJU1_9STRA) HSP 1 Score: 264 bits (674), Expect = 1.570e-77 Identity = 156/348 (44.83%), Postives = 220/348 (63.22%), Query Frame = 1 Query: 712 EILKLIPEEFLEEHLTE-SHVQNLQ---DLNELVLDEGRRPYATLHGRGKLFLCSDEGVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPEHAASVLLLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKADQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTNVTLGDAMAS----------ATNAGNKVQRQRAGAPIFDTIVALERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTR 1713 +++ L+PE+ L + + + +H+ DL ++ LD GRR + G ++FL DE +VT E ID +V +L G F DNRAG+ +LHRIS M +R+G + G+++R+GR+F G+A ++ DLL DK S+L+LG+PGSGKTT++R+ R ++ V +VDTSNEIAGDG IPH IG +RRMMVP+ Q +VM E +QNHTP +V+DE+ E A +K RGVR++ASAHGDL+ LL+N EL LVGG +VTLGDA A A + +K + QR G P FD IV + RG+ ++W I R+ +AVDAIL G+ YK E R+R Sbjct: 159 DLINLLPEDLLSKLVQKGTHIPTHMAEYDLVDINLDVGRRACCWM-GNDRVFLSDDENRLVTMEEIDCIVSKL---GGFGTDNRAGLEQKLHRISGMCNRKGE-VIGLSMRVGRWFEGNAAMLVDLLL----GSDK-----SILILGEPGSGKTTIVREAVRVLASRHNVCVVDTSNEIAGDGDIPH-PCIGDARRMMVPSLDAQSSVMVECVQNHTPHIMVIDEIGRPREVEAARTVKQRGVRIIASAHGDLRKLLKNKELRGLVGGVESVTLGDAAAKEEAMRKSNGKANGSFSKTKAQRMGEPTFDVIVEVRRGEKHEWRITRDAKVAVDAILDGQKYKAELRSR 491
BLAST of mRNA_Ecto-sp13_S_contig1001.27.1 vs. uniprot
Match: A0A7S4RVG8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RVG8_9STRA) HSP 1 Score: 261 bits (666), Expect = 5.470e-77 Identity = 171/404 (42.33%), Postives = 233/404 (57.67%), Query Frame = 1 Query: 574 APSRHALSSDATPAIFDDTDPTYALLSA--LDSLKQSDGVARDP-NSPHEILKLIPEEFLEEHLTESHVQNLQD---------LNELVLDEGRRPYATLHGRGKLFLCSDEGVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPEHAASVLLLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKADQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTNVTLGDAMASA-----TNAG-----NKVQRQRAGAPIFDTIVALERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTRIP 1719 A + A+ + +I D + YA+ S+ ++ + +P S E+ LI + L LT VQ D L ++ LD GRR + G ++FL DE +VT E ID +V +L G F DNRAG+ +LHRIS M +R G + G+++R+GR+F G+A ++ D L DK S+L+LG+PGSGKTT++RD ++ V +VDTSNEIAGDG+IPH IG +RRMMVP+ Q NVM E +QNHTP +V+DE+ E A +K RGVR++ASAHGDL+ LL+N EL LVGG VTLGD A +N G +K + QR G P FD IV + RG+ ++W I R+ AVDAIL G+ YKVE RTR P Sbjct: 53 ARAEFAIKYNGKRSICFDIENEYAIASSELIEVFHPESAMKNEPLKSKCEVKDLI--DLLPADLTHELVQEGTDIPTYMAEYALIDINLDVGRRACCWM-GDDRVFLSQDENRLVTMEEIDDIVSKL---GGFGSDNRAGLEQKLHRISGMCNRNGE-VIGLSMRVGRWFEGNAAMLVDFLL----GSDK-----SILILGEPGSGKTTIVRDAVSVLASRHNVCVVDTSNEIAGDGNIPH-PCIGDARRMMVPSLDAQSNVMVECVQNHTPHVMVIDEIGRPREVEAARTVKQRGVRIIASAHGDLRKLLKNKELRGLVGGVETVTLGDKAAKEEAERRSNGGANGQFSKTKAQRMGEPTFDIIVEVRRGEKHEWRITRDAKTAVDAILDGQKYKVESRTRDP 439
BLAST of mRNA_Ecto-sp13_S_contig1001.27.1 vs. uniprot
Match: A0A067BXX8_SAPPC (AAA domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BXX8_SAPPC) HSP 1 Score: 276 bits (706), Expect = 1.330e-76 Identity = 171/391 (43.73%), Postives = 237/391 (60.61%), Query Frame = 1 Query: 586 HALSSDATPAIFDDTDPTYALLSA--LDSLKQSDGVARDPNSPHE----ILKLIPEEFLEEHLTESHVQNLQDLNELVLDEGRRPYATLHGRGKLFLCSDEGVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPEHAASVLLLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKADQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTNVTLGDAMASATNAGN------KVQRQRAGAPIFDTIVALERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTRIPH 1722 HA++SD ++ D L+S L + + D ++ P HE IL L+P + L L D+ VLD GRRP+A ++G +++ VVT++ +D +V R+ G F DNRAG+ QLHRIS +R+R+ I +T+R+GRY G+AGL+ DLL + DK ++L LG+PG GKTT++R++ R+++ + V IVDTSNEIAGDG IPH +G +RRMMVP+ DQ VM E +QNHTP+ +V+DE+ NE A K RGVR+VASAHGDL+ LL+N L LVGG +VT+GDA+A + K+ QR G PIFD IV L RGQ N W IV + AVDAIL+G+ Y+ + RTR P+ Sbjct: 1635 HAIASDGQRSLCFDAQHNQRLVSTEYLQAWRPHDVISSPPVVIHEDLDDILGLLPPDLAAPLLQPDVSAKLLDI---VLDLGRRPWAWVNGARFFLDTANQDRVVTRDDLDSIVDRI---GGFGSDNRAGLERQLHRISAIRNRQDN-IIALTIRVGRYIEGNAGLIADLL----ATEDK-----NILFLGEPGCGKTTIVREVSRQLATKYNVCIVDTSNEIAGDGDIPH-PCVGLARRMMVPSLNDQAAVMVECVQNHTPEVMVIDEIGRPNEVEAARTCKQRGVRIVASAHGDLRKLLKNKPLRGLVGGVESVTVGDALAKEKQKKDDNGPLRKLLAQRGGEPIFDVIVELRRGQYNAWRIVTDAASAVDAILAGEAYEAQVRTRPPY 2008
BLAST of mRNA_Ecto-sp13_S_contig1001.27.1 vs. uniprot
Match: D7G6R4_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R4_ECTSI) HSP 1 Score: 255 bits (651), Expect = 5.350e-76 Identity = 143/333 (42.94%), Postives = 211/333 (63.36%), Query Frame = 1 Query: 838 GRGKLFLCSDEGVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFH---VQGSPDKPEHA-ASVLLLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQ-SRRMMVPNKADQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTNVTLGDAMASATNAGNKVQRQRAGAPIFDTIVALER---GQVNKWTIVRNVDLAVDAILS-GKPYKVEQRTRIPHDSGLQQAGTDPEDAAFLLKHAYATERIKQ 1809 GRGK++LC D GV+VT+ H++ VVG+L+ G F DN AG G LHR+ VMR + G+ I+GVT+R+GRY G A +VDDLLF+ GS + A AS+L+LG+ G+GKTT++RD+CRK+S +TVVIVDT ++I G G +PH AIG+ SRR+MVP QH V+ +A +NH+PQTIVVDE+S + + AC+ +KARG+RVVA A GDL +L++PE+ +GG ++ A+ + + +RAG+P+F+ +V LE G + +V NV+ VD +L G + E R + D + + A + H T +++ Sbjct: 15 GRGKVYLCKDRGVLVTRYHLNCVVGKLEHLGLFGRDNMAGFDGLLHRVGVMRDKGGK-IYGVTIRVGRYAKGMADMVDDLLFNHHTATGSGKRASQAPASILVLGRHGAGKTTLVRDMCRKLSSHETVVIVDTRSDIGGAGVVPHRRAIGEESRRVMVPQGMQQHEVILQAYRNHSPQTIVVDEISSQLDIEACMAVKARGIRVVAGAVGDLPYVLDSPEIGAALGGLEDI---QRSANVDDDSDDQMERRAGSPVFEAVVELEGRAGGAAPQGAVVTNVEAVVDELLDKGCVTRPEMRAPVGEDDVMLDEDAGEDAAGGIGGHGSCTPFLRK 343
BLAST of mRNA_Ecto-sp13_S_contig1001.27.1 vs. uniprot
Match: A0A1V9YTH6_9STRA (AAA domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YTH6_9STRA) HSP 1 Score: 261 bits (668), Expect = 5.070e-75 Identity = 153/338 (45.27%), Postives = 218/338 (64.50%), Query Frame = 1 Query: 715 ILKLIPEEFLEEHLTESHVQNLQDLNELVLDEGRRPYATLHGRGKLFLCSDEGVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPEHAASVLLLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKADQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTNVTLGDAMASATNAGN-----KVQRQRAGAPIFDTIVALERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTR 1713 IL L+P++ E ++ LQD+ VLD GR+P+A + G + FL ++ VT+E++D + + G F D+RAG+ QLHR+S +R+R G I G+T+R GRY G+A ++ D+L + +K SVL LG+PG GKTT++R++ R+++ + V IVDTSNEIAGDG+IPH +G +RRMMVP+ Q VM + +QNHTP+ +V+DE+ NE A K RGVR+VASAHGDL+ LL+N L+ LVGGT +VT+GDA+A + G K Q QRAG PIF+ +V L RG+ W +V + AVDAIL G+ Y+ + RTR Sbjct: 331 ILGLLPDDLAEPLRDDAVKCRLQDI---VLDLGRQPWAWVGG-ARFFLAGNDERTVTQENLDEIT---EAVGGFGSDDRAGLERQLHRVSAVRNRLGE-IMGLTIRAGRYIEGNASMIADIL----AAKNK-----SVLFLGEPGCGKTTIVREVSRQLAAKYNVCIVDTSNEIAGDGNIPH-PCVGLARRMMVPSLDKQAAVMVKVVQNHTPEVMVIDEIGRANEVEAARTCKQRGVRIVASAHGDLRKLLKNKPLSGLVGGTLSVTVGDALAKEKSRGKSGPIRKQQTQRAGEPIFEVVVELRRGEYTTWRLVMDAAAAVDAILEGQMYEAQVRTR 650
BLAST of mRNA_Ecto-sp13_S_contig1001.27.1 vs. uniprot
Match: A0A6G0XL58_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XL58_9STRA) HSP 1 Score: 269 bits (687), Expect = 1.170e-74 Identity = 171/409 (41.81%), Postives = 241/409 (58.92%), Query Frame = 1 Query: 517 YNKFNATYALMAREKVGLSAPSRHALSSDATPAI-FDDTDP-TYALLSALDSLKQSDG------VARDPNSPHEILKLIPEEFLEEHLTESHVQNLQDLNELVLDEGRRPYATLHGRGKLFLCSDEGVVVTKEHIDMVVGRLDLEGKFAGDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPEHAASVLLLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKADQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTNVTLGDAMASATNAGN--KVQRQRAGAPIFDTIVALERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTR 1713 YN+ + A + ++ A ++ ALS + FD + T L +D+ + D V + SP +L L+P + L L+ V L+++VLD+G P+AT+ G + D+ VVT + +D +V + G F DNRAG+ GQLHR+S +R+R I G+TLR+GR+ PG + L+ D+L A+VL LG+PG GKTT++RD+ R++SQ V IVDTSNEIAGDG +PH +G +RR+MVP+ Q +VM E +QNHTP+ IV+DE+ +E A K RGVR++ASAHG+L+ LL+N L LVGG +V +GDAMA N GN K QR G P+FD ++ LE+ Q N W +V NV AVDAIL GK Y+ RTR Sbjct: 785 YNQIDLDQAAWTQVQLASDARAKSALSLNGQRKFAFDQANQHTVVSLELIDATRPDDKYVSPSVVVEEDLSP--LLSLLPPD-LAAPLSAPRVT--LSLSDIVLDKGCCPWATI--AGSRLVLGDDSRVVTNQDLDAIVANV---GGFGSDNRAGLEGQLHRVSAVRNRR-NEIVGLTLRVGRHIPGLSALILDIL----------HSDANVLFLGEPGCGKTTIVRDVARELSQSSIVCIVDTSNEIAGDGDVPH-PCVGMARRIMVPSLDAQSSVMVECVQNHTPEVIVIDEIGRASEVEAARTCKQRGVRIIASAHGNLRKLLKNKPLRGLVGGVESVVVGDAMAQ--NLGNFQKKIAQRGGEPVFDVVIELEKRQYNAWCVVTNVGKAVDAILEGKKYQATVRTR 1169 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1001.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1001.27.1 >prot_Ecto-sp13_S_contig1001.27.1 ID=prot_Ecto-sp13_S_contig1001.27.1|Name=mRNA_Ecto-sp13_S_contig1001.27.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=602bp MQVVYDFSNSAIALRRQFGAGFTIGRILDLQLAFEALHGRFGADVVTVLRback to top mRNA from alignment at Ecto-sp13_S_contig1001:270..7243+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1001.27.1 ID=mRNA_Ecto-sp13_S_contig1001.27.1|Name=mRNA_Ecto-sp13_S_contig1001.27.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6974bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1001:270..7243+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1001:270..7243+ >mRNA_Ecto-sp13_S_contig1001.27.1 ID=mRNA_Ecto-sp13_S_contig1001.27.1|Name=mRNA_Ecto-sp13_S_contig1001.27.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1806bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1001:270..7243+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |