mRNA_Ecto-sp13_S_contig10.16.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10.16.1 vs. uniprot
Match: D7FV03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV03_ECTSI) HSP 1 Score: 145 bits (366), Expect = 3.230e-44 Identity = 69/72 (95.83%), Postives = 72/72 (100.00%), Query Frame = 1 Query: 1 MARAADNKDLRQIRRLANQALVDVFNALGGDRWRNKSGWLTPGTDVKRWHGVTVNAGSLVSLNLISNDLQVS 216 MARAADNKDLRQIRRLANQALVDVFNALGGDRWRNKSGWLTPGTDVK+WHGVTVNAGSLVSLNL+SNDL+VS Sbjct: 1 MARAADNKDLRQIRRLANQALVDVFNALGGDRWRNKSGWLTPGTDVKKWHGVTVNAGSLVSLNLMSNDLEVS 72
BLAST of mRNA_Ecto-sp13_S_contig10.16.1 vs. uniprot
Match: D8LJ86_ECTSI (Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ86_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 8.710e-17 Identity = 34/58 (58.62%), Postives = 47/58 (81.03%), Query Frame = 1 Query: 40 RRLANQALVDVFNALGGDRWRNKSGWLTPGTDVKRWHGVTVN-AGSLVSLNLISNDLQ 210 RR+ANQ L D+++ LGGD W+ + GWL PG+DV+ WHG+T+ +G LVS+NLISNDL+ Sbjct: 33 RRMANQGLQDLYDWLGGDNWKCRDGWLDPGSDVREWHGLTITTSGDLVSINLISNDLE 90
BLAST of mRNA_Ecto-sp13_S_contig10.16.1 vs. uniprot
Match: A0A329RHR8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RHR8_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 8.960e-10 Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 1 Query: 58 ALVDVFNALGGDRWRNKSGWLTPGTDVKRWHGVTVNAGSLVSLNLISNDLQ 210 ALV++++AL GDRWR + GW P D ++W GV V G +V+L L +N+L Sbjct: 15 ALVELYDALNGDRWRRRDGWKQPTRDPEQWFGVEVAMGHVVALELPANELS 65
BLAST of mRNA_Ecto-sp13_S_contig10.16.1 vs. uniprot
Match: A0A3F2RJP5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJP5_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.250e-9 Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 1 Query: 58 ALVDVFNALGGDRWRNKSGWLTPGTDVKRWHGVTVNAGSLVSLNLISNDLQ 210 ALV++++ALGGDRWR + GW P D ++W GV V G +V+L L +N+L Sbjct: 243 ALVEIYDALGGDRWRRRDGWKQPTQDPEQWFGVEVTMGHVVALELPANELS 293
BLAST of mRNA_Ecto-sp13_S_contig10.16.1 vs. uniprot
Match: A0A484DS87_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DS87_BRELC) HSP 1 Score: 61.2 bits (147), Expect = 3.040e-9 Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 1 Query: 55 QALVDVFNALGGDRWRNKSGWLTPGTDVKRWHGVTVNAGSLVSLNLISNDLQ 210 +ALVD+++AL GDRWR + GW P D K W GV V G +V+L L +N+L Sbjct: 14 KALVDLYDALNGDRWRRRDGWKQPTRDPKHWFGVEVVMGHVVALELPTNELS 65
BLAST of mRNA_Ecto-sp13_S_contig10.16.1 vs. uniprot
Match: K3WE76_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WE76_GLOUD) HSP 1 Score: 61.2 bits (147), Expect = 3.100e-9 Identity = 24/51 (47.06%), Postives = 37/51 (72.55%), Query Frame = 1 Query: 55 QALVDVFNALGGDRWRNKSGWLTPGTDVKRWHGVTVNAGSLVSLNLISNDL 207 QAL+++++ALGGDRWR + W P DV+ W+GV V G +V++ L +N+L Sbjct: 14 QALLELYDALGGDRWRRRDAWKQPTVDVESWYGVDVMMGHVVAIELPANEL 64
BLAST of mRNA_Ecto-sp13_S_contig10.16.1 vs. uniprot
Match: G4YS16_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4YS16_PHYSP) HSP 1 Score: 60.8 bits (146), Expect = 4.230e-9 Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 1 Query: 58 ALVDVFNALGGDRWRNKSGWLTPGTDVKRWHGVTVNAGSLVSLNLISNDLQ 210 ALV++++ALGGDRWR + GW P D ++W GV V G +V+L L +N+L Sbjct: 15 ALVELYDALGGDRWRRRDGWKQPTRDPEQWFGVEVAMGHVVALELPANELS 65
BLAST of mRNA_Ecto-sp13_S_contig10.16.1 vs. uniprot
Match: H3GFP3_PHYRM (Crinkler domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFP3_PHYRM) HSP 1 Score: 60.8 bits (146), Expect = 4.420e-9 Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 1 Query: 58 ALVDVFNALGGDRWRNKSGWLTPGTDVKRWHGVTVNAGSLVSLNLISNDLQ 210 ALV++++ALGGDRWR + GW P D ++W GV V G +V+L L +N+L Sbjct: 15 ALVELYDALGGDRWRRRDGWKQPTRDPEQWFGVEVAMGHVVALELPANELS 65
BLAST of mRNA_Ecto-sp13_S_contig10.16.1 vs. uniprot
Match: D0NG45_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NG45_PHYIT) HSP 1 Score: 60.5 bits (145), Expect = 5.160e-9 Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 1 Query: 58 ALVDVFNALGGDRWRNKSGWLTPGTDVKRWHGVTVNAGSLVSLNLISNDLQ 210 ALVD+++AL GDRWR + GW P D + W+GV V G +V+L L +N+L Sbjct: 15 ALVDLYDALNGDRWRRRDGWKQPTRDPEHWYGVKVVMGHVVALELPANELS 65
BLAST of mRNA_Ecto-sp13_S_contig10.16.1 vs. uniprot
Match: A0A662XZS6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZS6_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.490e-8 Identity = 24/50 (48.00%), Postives = 36/50 (72.00%), Query Frame = 1 Query: 58 ALVDVFNALGGDRWRNKSGWLTPGTDVKRWHGVTVNAGSLVSLNLISNDL 207 ALV++F+ALGGD+WR + GW P D ++W GV V G +V++ L +N+L Sbjct: 15 ALVELFDALGGDKWRRRDGWKQPTRDPEQWFGVEVVLGHVVAIELPANEL 64 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10.16.1 >prot_Ecto-sp13_S_contig10.16.1 ID=prot_Ecto-sp13_S_contig10.16.1|Name=mRNA_Ecto-sp13_S_contig10.16.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=74bp MARAADNKDLRQIRRLANQALVDVFNALGGDRWRNKSGWLTPGTDVKRWHback to top mRNA from alignment at Ecto-sp13_S_contig10:64756..65101+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10.16.1 ID=mRNA_Ecto-sp13_S_contig10.16.1|Name=mRNA_Ecto-sp13_S_contig10.16.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=346bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10:64756..65101+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10:64756..65101+ >mRNA_Ecto-sp13_S_contig10.16.1 ID=mRNA_Ecto-sp13_S_contig10.16.1|Name=mRNA_Ecto-sp13_S_contig10.16.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=222bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10:64756..65101+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |