mRNA_Ecto-sp13_S_contig1.12.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1.12.1 vs. uniprot
Match: D7G1Z1_ECTSI (C2H2 and CCCH zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z1_ECTSI) HSP 1 Score: 337 bits (865), Expect = 4.350e-113 Identity = 158/166 (95.18%), Postives = 164/166 (98.80%), Query Frame = 1
Query: 1 MADADRRSTGGLYVGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSLGADAMDLHEDQHQYECMFQDCTATFSSLKRHEEHYDTSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRHKHLVEAHLYPQSFDFSRQEMT 498
M DADRRSTGGLY+GPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMS GADAMDLHEDQHQ+ECMFQDCTATFSSLKRHEEHY+TSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRH+HLVEAHLYP+SFDFSR+EMT
Sbjct: 1 MVDADRRSTGGLYLGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSEGADAMDLHEDQHQFECMFQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRHEHLVEAHLYPESFDFSRREMT 166
BLAST of mRNA_Ecto-sp13_S_contig1.12.1 vs. uniprot
Match: A0A836CFJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ7_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.380e-38 Identity = 100/287 (34.84%), Postives = 135/287 (47.04%), Query Frame = 1
Query: 34 LYVGPVLRPLSSDSEFFDEGNTNRALLCKLNVF-AIMSLGADAMDLHEDQHQ--YECMFQDCTATFSSLKRHEEHYDTSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRHKHLVEAHLYPQSFDFSR---QEMTMPSYTRKKARAKRAKDARRKGGNLHAETAGDGRKDKLPARTAKAGAS---NEAEMVAAAQPVETPHPHSAPGPTEKNSRRTGQGPAAPQPSLATAAAPAAASSRMACRFWRTAGGCRRGKNCKFVH 867
L+ P R D FF+ G+ RA CK++V + DA H + C C ATF+S R EHYDTSHRH C TCGR+F T RLLDLHLSE HDS+F+AMAE+R MY CLVEGC + F+ + R H++ H YP++FDF R Q+ T+ +T G L + + + PA + A A+ N++E ++K+ +T A R C F+ TA GCR G C F+H
Sbjct: 40 LHTAPFKRRYQPDDPFFEAGDLARATACKMSVLHGLWDDEEDAQSAGGRAHTGGFACRIGGCNATFTSTARFNEHYDTSHRHTCATCGRAFITPRLLDLHLSELHDSYFKAMAEKRHMYECLVEGCGKKFKDNNGRRAHMIAVHHYPRAFDFHRPPGQKPTVKHHT----------------GALRGRSGSAADQSQAPADQSDAAAAIVVNQSER------------------SKKHGGKT-------------------AKRRRRCHFFDTAAGCRNGAECPFLH 273
BLAST of mRNA_Ecto-sp13_S_contig1.12.1 vs. uniprot
Match: UPI000854ABAA (zinc finger protein 511 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854ABAA) HSP 1 Score: 125 bits (313), Expect = 1.470e-29 Identity = 61/152 (40.13%), Postives = 92/152 (60.53%), Query Frame = 1
Query: 31 GLYVGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSLGADAMDLHEDQHQYECMFQDCTATFSSLKRHEEHYDTSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRHKHLVEAHLYPQSFDFSR 486
G + +R S D +FF++G+ +R L + +V G ++ +++C C+ F +L+ +E HY+T HR+ C TC RSFP+ RLLD+H+ E HDS F MAE+ M+ CLVEGC E F++SG+R HL++ HLYP F F +
Sbjct: 32 GTFTPSTVR-FSRDHQFFEDGDVHRHLYLE-DVLT----GIGEVEERSKVSEFQCQTAGCSQVFDTLESYEHHYNTLHRNVCSTCKRSFPSARLLDIHILEWHDSLFEIMAEKTNMFQCLVEGCVEKFKTSGERKNHLIKTHLYPSDFRFDK 177
BLAST of mRNA_Ecto-sp13_S_contig1.12.1 vs. uniprot
Match: UPI001CF2687F (zinc finger protein 511 isoform X1 n=2 Tax=Bufo gargarizans TaxID=30331 RepID=UPI001CF2687F) HSP 1 Score: 119 bits (299), Expect = 3.790e-28 Identity = 64/166 (38.55%), Postives = 94/166 (56.63%), Query Frame = 1
Query: 13 DRRSTGGLYVGPVLRPLSS------DSEFFDEGNTNRALLCKLNVFAIMSLGADAMDLHEDQHQYECMFQDCTATFSSLKRHEEHYDTSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRHKHLVEAHLYPQSFDFSRQE 492
D R GL V + +S EFF++G+ +R L + +VF ++ ++ ++ C DC F +LK +E HY+T HR+ C C SFP+ RLLD+H+ E HDS F+ MAE M+ CLVEGC E F++ G+R HL+++HLYP F F + E
Sbjct: 17 DIRQFPGLLVKNLEEAISGRVGFRRKHEFFEDGDVHRHLYLQ-DVFTSIA----EVEAKSSISEFPCEEADCDQLFDTLKSYEHHYNTLHRNVCSVCKISFPSVRLLDIHIFEGHDSLFQIMAENTNMFQCLVEGCMEKFKTIGERRNHLIKSHLYPSDFQFDKPE 177
BLAST of mRNA_Ecto-sp13_S_contig1.12.1 vs. uniprot
Match: UPI0019976E9F (zinc finger protein 511 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI0019976E9F) HSP 1 Score: 122 bits (305), Expect = 4.050e-28 Identity = 61/161 (37.89%), Postives = 94/161 (58.39%), Query Frame = 1
Query: 4 ADADRRSTGGLYVGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSLGADAMDLHEDQHQYECMFQDCTATFSSLKRHEEHYDTSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRHKHLVEAHLYPQSFDFSR 486
+D +++ P L D EFF +G+ +R L + ++ + G A+++ E ++C C F +L+ +E HY++ HRH C +C RSFP++RLLD+H+ E HDS F+ MAER MY CLVEGC F++S +R +HL+ H YP F F +
Sbjct: 42 SDGPEKNSSPFTFTPQRFRLDKDDEFFADGDVHRHLYLQ-DLVTPHTEGPPALNISE----FQCHVAGCKQLFDTLETYEHHYNSLHRHVCSSCKRSFPSNRLLDIHILEWHDSLFQVMAERECMYQCLVEGCGLKFQTSKERKEHLITTHSYPADFRFDK 197
BLAST of mRNA_Ecto-sp13_S_contig1.12.1 vs. uniprot
Match: A0A124SHE8_CYNCS (Zinc finger, C2H2-like protein n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A124SHE8_CYNCS) HSP 1 Score: 120 bits (302), Expect = 5.410e-28 Identity = 69/173 (39.88%), Postives = 90/173 (52.02%), Query Frame = 1
Query: 37 YVGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSLGADAMDLHEDQH-QYECMFQDCTATFSSLKRHEEHYDTSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERR-PMYACLVEGCPEVFESSGKRHKHLVEAHLYPQSFDFSRQEMTMPSYTRKKARAKRAKDA 549
Y PVLR D FF GN R LL K + + ED+H + C C A SL E+HY+ H C C R +PT RLL +H+SEAHDSFF+A A R PMY CLVEGC +S RH+HL++ H +P SF+F ++ KK + K+ + A
Sbjct: 20 YWLPVLRRFGPDDPFFASGNIERELLAKQVALDLTEEEKQQLRNLEDEHREVFCPIVGCVARLRSLAEFEDHYNARHTACCSVCSRVYPTSRLLSIHVSEAHDSFFQAKAARGYPMYECLVEGCGVKLKSYKSRHQHLMDKHNFPSSFEFFKKSRPSKKERVKKTQRKKQQHA 192
BLAST of mRNA_Ecto-sp13_S_contig1.12.1 vs. uniprot
Match: A0A8C5QBI0_9ANUR (Zinc finger protein 511 n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5QBI0_9ANUR) HSP 1 Score: 120 bits (302), Expect = 6.680e-28 Identity = 61/158 (38.61%), Postives = 90/158 (56.96%), Query Frame = 1
Query: 13 DRRSTGGLYVGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSLGADAMDLHEDQHQYECMFQDCTATFSSLKRHEEHYDTSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRHKHLVEAHLYPQSFDFSR 486
DRR PV + EFF++G+ +R L K + +I + + ++ C C F +L+ +E HY+T HR+ C C RSFP+ RLLD+H+ E HD+FF+ MAE+ MY CLVEGC + F++S +R HL++ HLYP F F +
Sbjct: 29 DRRHDTERTFNPVRVRFPREHEFFEDGDVHRQLYLKGILQSIREV-----EERTKVSEFRCQTTGCAQFFDTLESYEHHYNTLHRNVCSICKRSFPSARLLDIHILEWHDTFFQLMAEKENMYQCLVEGCLKKFKTSQERKDHLIKIHLYPSDFRFDK 181
BLAST of mRNA_Ecto-sp13_S_contig1.12.1 vs. uniprot
Match: A0A7J7I3C1_CAMSI (C2H2-type domain-containing protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7I3C1_CAMSI) HSP 1 Score: 120 bits (300), Expect = 8.790e-28 Identity = 72/177 (40.68%), Postives = 92/177 (51.98%), Query Frame = 1
Query: 13 DRRSTGGLYVGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSLGADAMDLHEDQHQYE--CMFQDCTATFSSLKRHEEHYDTSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERR-PMYACLVEGCPEVFESSGKRHKHLVEAHLYPQSFDFSRQEMTMPSYTRKKARAK 534
+R G Y PVLR S DS FF GN R LL K I + ED+ E C C A +SL E+HY+ H C C R +PT RLL +H+SEAHDSFF+A R MY CLV+GC +S R +HLV+ H +P SF+F ++ ++T KK R K
Sbjct: 6 NRTPLGFPYWSPVLRHFSPDSSFFASGNIERELLAKQVALDINEDEKQQLQSMEDEENREVFCPIVGCGARLNSLDVFEDHYNARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGFAMYECLVDGCGVKLKSYKSRQQHLVDKHKFPTSFEFFKK-----AHTSKKQRQK 177
BLAST of mRNA_Ecto-sp13_S_contig1.12.1 vs. uniprot
Match: A0A8K1CJW5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJW5_PYTOL) HSP 1 Score: 120 bits (300), Expect = 1.060e-27 Identity = 61/150 (40.67%), Postives = 86/150 (57.33%), Query Frame = 1
Query: 34 LYVGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSLGADAMDLHEDQHQ-YECMFQDCTATFSSLKRHEEHYDTSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRHKHLVEAHLYPQSFDF 480
L G R S + F GN R + + D MD +++ ++C +C F S+ +EEHYD HR+ C C RSF +HRL+D+H+SE HD+FFR +++R+ MY CLV+GC EVF+ KR +HLV+ H YP SF F
Sbjct: 7 LPSGKCRRRYSPEHALFTPGNALRTTTYYRDAGCDVP-SDDEMDASDEKPALFQCRLFNCDKGFDSIAAYEEHYDLVHRNICHACYRSFLSHRLMDIHISEMHDAFFRILSKRQSMYVCLVDGCTEVFKHEDKRMRHLVKEHKYPTSFSF 155
BLAST of mRNA_Ecto-sp13_S_contig1.12.1 vs. uniprot
Match: UPI001ABE9BF4 (zinc finger protein 511 n=1 Tax=Bufo bufo TaxID=8384 RepID=UPI001ABE9BF4) HSP 1 Score: 118 bits (295), Expect = 1.300e-27 Identity = 58/139 (41.73%), Postives = 85/139 (61.15%), Query Frame = 1
Query: 76 EFFDEGNTNRALLCKLNVFAIMSLGADAMDLHEDQHQYECMFQDCTATFSSLKRHEEHYDTSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRHKHLVEAHLYPQSFDFSRQE 492
EFF+ G+ +R L + +VF ++ ++ ++ C DC F +LK +E HY+T HR+ C C SFP+ RLLD+H+ E HDS F+ MAE M+ CLVEGC E F++ G+R HL+++HLYP F F + E
Sbjct: 47 EFFEGGDVHRHLYLQ-DVFTSIA----EVEAKSSISEFPCEVADCDQLFDTLKSYEHHYNTLHRNVCSICKISFPSVRLLDIHIFEGHDSLFQIMAENTNMFQCLVEGCMEKFKTIGERRNHLIKSHLYPSDFQFDKPE 180 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1.12.1 >prot_Ecto-sp13_S_contig1.12.1 ID=prot_Ecto-sp13_S_contig1.12.1|Name=mRNA_Ecto-sp13_S_contig1.12.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=428bp MADADRRSTGGLYVGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSLGback to top mRNA from alignment at Ecto-sp13_S_contig1:87201..89384- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1.12.1 ID=mRNA_Ecto-sp13_S_contig1.12.1|Name=mRNA_Ecto-sp13_S_contig1.12.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2184bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1:87201..89384- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1:87201..89384- >mRNA_Ecto-sp13_S_contig1.12.1 ID=mRNA_Ecto-sp13_S_contig1.12.1|Name=mRNA_Ecto-sp13_S_contig1.12.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1284bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1:87201..89384- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |