mRNA_E-siliculosus-1a_F_contig10523.381.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig10523.381.1
Unique NamemRNA_E-siliculosus-1a_F_contig10523.381.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10523.381.1 vs. uniprot
Match: D8LQT5_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT5_ECTSI)

HSP 1 Score: 795 bits (2052), Expect = 6.070e-286
Identity = 438/512 (85.55%), Postives = 446/512 (87.11%), Query Frame = 1
Query:    1 MAQNTPLPAAAPLHDAAGVGDAVAVAGLLKDGADRNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRASDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDLFASFGADGPFLTALDLAVENGHLEVVRTLAEAGADVNLLYEDGCDEIPPLVTAAXXXXXXXXXXXXXXXXXXXXFGHDGFSALHQAKDVRVMEVXXXXXXXIEQGITTDYDSHGCDEATPIGWLCLKTHQRFSPLQSVGYGLEVGAAGSSEDEIGRATAMVQLLLSRGAKIDSKAGCVGHCLRTGARGPPLSAAVYNGTTAICAALIDNGADLDATDWELQDFDADGDVKIRPIHDAARFGDVDILRLLLVAGAGANSLSNFRRGDDLGRWGTPLHVACRYSQPQCVRELLRWGADVWVEEKQSSGEEEXXGEQEKAPCECESCLPQLAGCGKTPAEVIGLRDVVTNEEINARPSDSTTVGDGDEIRRELLWWRRCAVVLLAARLAKRVSADGGTTTG 1536
            MAQNTPLPAAAPLHDAAGVGDAVAVA LLKDGADRNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRASDE                            G D+FASFG  GP LTALDLAVENGHLEVVRTLAEAGADVNL+YEDG  E+PPLVT  XXXXXXXXXXXXXXXXXXXX      SALHQAKDVRVMEV       IEQGITTDYDSHGCDEATPIGWL LKTHQRFSPLQ++GYGLEVGAA SSEDEIGRATAMVQLLL RGAKIDSKAGCVGHCLRTGARGPPLSAAVYNGTTAICAALIDNGADLDATDWELQDFDADGDVKIRPIHDAARFGDVDILRLLL AGAGANSLSNFRRGDDL RWGTPLHVACRYSQ  CVRELLRWGADVW EE+QSSGEE XX    KAPCECESCL + AGCGKTPAEVIGLRDVVTN EINARPSDSTTVGDGDEIRRELLWWRRCAVVLLAARLAK+VSADGGTTTG
Sbjct:    1 MAQNTPLPAAAPLHDAAGVGDAVAVADLLKDGADRNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRASDEDCNDPTPLHEASARGGVEVTKALLKAGAGKDIFASFGTGGPCLTALDLAVENGHLEVVRTLAEAGADVNLIYEDGYAEVPPLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALHQAKDVRVMEVLLNAGADIEQGITTDYDSHGCDEATPIGWLSLKTHQRFSPLQNLGYGLEVGAALSSEDEIGRATAMVQLLLRRGAKIDSKAGCVGHCLRTGARGPPLSAAVYNGTTAICAALIDNGADLDATDWELQDFDADGDVKIRPIHDAARFGDVDILRLLLGAGAGANSLSNFRRGDDLERWGTPLHVACRYSQLGCVRELLRWGADVWAEERQSSGEEXXXXXXXKAPCECESCLSKSAGCGKTPAEVIGLRDVVTNLEINARPSDSTTVGDGDEIRRELLWWRRCAVVLLAARLAKQVSADGGTTTG 512          
BLAST of mRNA_E-siliculosus-1a_F_contig10523.381.1 vs. uniprot
Match: A0A6H5KST3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KST3_9PHAE)

HSP 1 Score: 768 bits (1984), Expect = 1.260e-274
Identity = 438/589 (74.36%), Postives = 451/589 (76.57%), Query Frame = 1
Query:    1 MAQNTPLPAAAPLHDAAGVGDAVAVAGLLKDGADRNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRASDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDLFASFGADGPFLTALDLAVENGHLEVVRTLAEAGADVNLLYEDGCDEIPPLVTAAXXXXXXXXXXXXXXXXXXXXFGHDGFSALHQAKDVRVMEVXXXXXXXIEQGITTDYDSHGCDEATPIGWLCLKTHQRFSPLQSVGYGLEVGAAGSSEDEIGRATAMVQLLLSRGAKIDSKAGCVGHCLRTGARGPPLSAAVYNGTTAICAALIDNGADLDATDWELQDFDADGDVKIRPIHDAARFGDVDILRLLLVAGAGANSLSNFRRGDDLGRWGTPLHVA----------------------------------CRYSQPQCVRELLRWGADVWVEEKQSSGEEEXXGEQEKAPCECESCLPQLAGCGKTPAEVIGLRDVVTNEEINARPSDSTTVGDGDEIRRELLWWRRCAVVLLAARLAKRVSADGGTTTGVSSANAVQRSQVFADDELLAIAGRMANLGGSRQGAFRHIVTFL 1665
            MAQNTPL AAAPLHDAAGVGDAVAVAGLLKD A RNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRASDE                              D+FASFG DGPFLTALDLAVENGHLEVVRTL EAGADVNL+YEDGCDE+PPLVTAA XXXXXXXXXXXXXXXXXXXFGHDGFSALH+AKDVRVMEV       IEQGI+TDYDSHGCDEATP+GWLCLKTHQRFSPLQSVGY    GAA SSEDEI RATAMV+LLL RGAKIDSKAGCVGHCLRTGARGPPLSAAVYNGTTAICAAL+D GADLDATDWELQDF +D DVKIRPIHDAARFGDVDILRLLLVAGAGANSLSN  R DDL RWGTPLHVA                                  CRYSQ  CVRELLRWGAD+W EEKQS     XX   EK PCECESC    AGCGK P EVI LRD VTNEEINARPSDS                     +LLAARLAK+VSADGG TT  SSA  V+RSQV ADDELLAIAGRMANLGGSRQGAFRHIVTFL
Sbjct:    7 MAQNTPLSAAAPLHDAAGVGDAVAVAGLLKDSAHRNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRASDEDCEDPTPLHEASARGGVEVTKALLQAGARKDIFASFGRDGPFLTALDLAVENGHLEVVRTLVEAGADVNLIYEDGCDEVPPLVTAAKXXXXXXXXXXXXXXXXXXXFGHDGFSALHEAKDVRVMEVLLDAGADIEQGISTDYDSHGCDEATPVGWLCLKTHQRFSPLQSVGYECTAGAALSSEDEIERATAMVKLLLRRGAKIDSKAGCVGHCLRTGARGPPLSAAVYNGTTAICAALVDKGADLDATDWELQDFGSDLDVKIRPIHDAARFGDVDILRLLLVAGAGANSLSNVHRDDDLKRWGTPLHVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACRYSQVGCVRELLRWGADMWAEEKQSGXXXXXXXXXEKVPCECESCFSNSAGCGKIPEEVIALRDAVTNEEINARPSDS---------------------ILLAARLAKQVSADGGATTAASSAKTVKRSQVLADDELLAIAGRMANLGGSRQGAFRHIVTFL 574          
BLAST of mRNA_E-siliculosus-1a_F_contig10523.381.1 vs. uniprot
Match: A0A6H5KEN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN5_9PHAE)

HSP 1 Score: 593 bits (1529), Expect = 6.110e-208
Identity = 330/394 (83.76%), Postives = 339/394 (86.04%), Query Frame = 1
Query:    1 MAQNTPLPAAAPLHDAAGVGDAVAVAGLLKDGADRNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRASDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDLFASFGADGPFLTALDLAVENGHLEVVRTLAEAGADVNLLYEDGCDEIPPLVTAAXXXXXXXXXXXXXXXXXXXXFGHDGFSALHQAKDVRVMEVXXXXXXXIEQGITTDYDSHGCDEATPIGWLCLKTHQRFSPLQSVGYGLEVGAAGSSEDEIGRATAMVQLLLSRGAKIDSKAGCVGHCLRTGARGPPLSAAVYNGTTAICAALIDNGADLDATDWELQDFDADGDVKIRPIHDAARFGDVDILRLLLVAGAGANSLSNFRRGDDLGRWGTPLHVACR 1182
            MAQNTPL AAAPLHDAAGVGDAVAVAGLLKD A RNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRASDE                              D+FASFG DGPFLTALDLAVENGHLEVVRTL EAGADVNL+YEDGCDE+PPLVTAA XXXXXXXXXXXXXXXXXXXFGHDGFSALH+AKDVRVMEV       IEQGI+TDYDSHGCDEATP+GWLCLKTHQRFSPLQSVGY    GAA SSEDEI RATAMV+LLL RGAKIDSKAGCVGHCLRTGARGPPLSAAVYNGTTAICAAL+D GADLDATDWELQDF +D DVKIRPIHDAARFGDVDILRLLLVAGAGANSLSNFRRGD L RWGTPLHVACR
Sbjct:    7 MAQNTPLSAAAPLHDAAGVGDAVAVAGLLKDSAHRNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRASDEDCEDPTPLHEASARGGVEVTKALLQAGARKDIFASFGRDGPFLTALDLAVENGHLEVVRTLVEAGADVNLIYEDGCDEVPPLVTAAKXXXXXXXXXXXXXXXXXXXFGHDGFSALHEAKDVRVMEVLLDAGADIEQGISTDYDSHGCDEATPVGWLCLKTHQRFSPLQSVGYECTAGAALSSEDEIERATAMVKLLLRRGAKIDSKAGCVGHCLRTGARGPPLSAAVYNGTTAICAALVDKGADLDATDWELQDFGSDLDVKIRPIHDAARFGDVDILRLLLVAGAGANSLSNFRRGDVLQRWGTPLHVACR 400          
BLAST of mRNA_E-siliculosus-1a_F_contig10523.381.1 vs. uniprot
Match: D8LQT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT4_ECTSI)

HSP 1 Score: 593 bits (1530), Expect = 8.580e-208
Identity = 354/462 (76.62%), Postives = 361/462 (78.14%), Query Frame = 1
Query:    1 MAQNTPLPAAAPLHDAAGVGDAVAVAGLLKDGADRNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRASDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDLFASFGADGPFLTALDLAVENGHLEVVRTLAEAGADVNLLYEDGCDEIPPLVTAAXXXXXXXXXXXXXXXXXXXXFGHDGFSALHQAKDVRVMEVXXXXXXXIEQGITTDYDSHGCDEATPIGWLCLKTHQRFSPLQSVGYGLEVGAAGSSEDEIGRATAMVQLLLSRGAKIDSKAGCVGHCLRTGARGPPLSAAVYNGTTAICAALIDNGADLDATDWELQDFDADGDVKIRPIHDAARFGDVDILRLLLVAGAGANSLSNFRRGDDLGRWGTPLHVACRYSQPQCVRELLRWGADVWVEEKQSSGEEEXXGEQE--KAPCECESCLPQLAGCGKTPAEVIGLRDVVT 1380
            MAQNTPLPAAAPLHDAAGVGDAVAVA LLKDGADRNARVDREGYSYSDGATALHIAAREDHLSVAV LLAAGAWPD     +                            G D+FASFG  GP LTALDLAVENGHLEVVRTLAEAGADVNL+YED   E+PPLVTA XXXXXXXXXXXXXXXXXXX FG DGFSALHQAKDVRVMEV       IEQGITTDYDSHG        W+   T  R             GAA SSED+I RATAMVQLLL RGAKIDSKAGCVGHCLRTGARGPPLSAAVY+GTTAICAALID GADLDATDWELQDFD D DVKIRPIHDAARF  VDILRLLL AGAGANSLSNFRRGDDL RWGTPLHVACRYSQ  CVRELLRWGADVW EEKQS GEE XX      KAPCECESCLPQ AGCGK PAEVIGLRDVVT
Sbjct:    1 MAQNTPLPAAAPLHDAAGVGDAVAVADLLKDGADRNARVDREGYSYSDGATALHIAAREDHLSVAVVLLAAGAWPD---VTKIAKIQLHFTRPPRGGRVEVAKALLKAGAGKDIFASFGTGGPRLTALDLAVENGHLEVVRTLAEAGADVNLIYEDRYVEVPPLVTAXXXXXXXXXXXXXXXXXXXXGFGQDGFSALHQAKDVRVMEVLLNAGADIEQGITTDYDSHGM-------WV---TDWRS------------GAALSSEDDIERATAMVQLLLRRGAKIDSKAGCVGHCLRTGARGPPLSAAVYSGTTAICAALIDKGADLDATDWELQDFDVDSDVKIRPIHDAARFRGVDILRLLLGAGAGANSLSNFRRGDDLERWGTPLHVACRYSQLGCVRELLRWGADVWAEEKQSGGEEXXXXXXXXXKAPCECESCLPQSAGCGKAPAEVIGLRDVVT 437          
BLAST of mRNA_E-siliculosus-1a_F_contig10523.381.1 vs. uniprot
Match: D8LI67_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI67_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 1.350e-15
Identity = 163/627 (26.00%), Postives = 215/627 (34.29%), Query Frame = 1
Query:   37 LHDAAGVGDAVAVAGLLKDGA-DRNARVDREGYSYSDGATALHIAAREDHLSVAVALLAAGAWPDGRAS-DEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDLFASFGADGPFLTALDLAVENGHLEVVRTLAEAGADVNLLYED----------GCDEIP-----------------------PLVTAAXXXXXXXXXXXXXXXXXXXXFGHD----------------------------------GFSALHQAKDVRVMEVXXXXXXXIEQGITTDYDSHGCDEATPIGWLCLKTHQRFSPLQSVGYGLEVGAAGSSEDEIGRATAMVQLLLSRGAKIDSKAGCVGHC--------LRTGARGPPLSAAVYNGTTAICAALIDNGADLDATDWELQDFDADGDVKIRPIHDAARFGDVDILRLLLVAGAGANSLSNFRRGDDLGRWGTPLHVACRYSQPQCVRELLRWGADVWVEEKQSSGEEEXXGEQEKAP----------CECESCLPQLA--------GCGKTPAEVIGLRDVVT---------NEEINARPS--------------------DSTTVGDGDEIRR----ELLWWRRCAVVLLAARLAKRVSADGGTTT 1533
            LH AA   DA  +  LL+ G  D N+RV  E  +  +GATALH+AA++ HL   +ALL  GA P GR S D                              +D  +    D   LT L LA   GH  VV+ L  AG   + L             G +  P                       PL  A+                       D                                  G + LH A+D   +E              + Y        TP+G  C   H+    L++   G+              ATA V+ LL  GA +  +    G              A  P LS A  NG   I +AL+  GA LD  +      D DG     PIHDA +   VD+LRLLL AGA  ++ +        G W TPLH+ACRY+  +CV ELLRW A +   E+ SS      G     P             E   P+          G GKTPAEV+GL+++                A PS                     +T VG+ + IRR    E  W RR   VL+   L ++   +G   T
Sbjct:   24 LHKAAHRNDAGTITMLLRGGGMDPNSRV--ECPNCDEGATALHLAAQQGHLEAVLALLDGGARPGGRDSTDPGRPRSENNRVVSGSSSPSSSSSEEWDISDSDDVSEQEHDD--LTPLHLACVGGHTAVVQALLSAGEPTDRLASGRKVSDHAAVHGNNAAPXXXXXXXXXXXXXXXXXXXXXXTPLHLASACGAAGAVRALVGAGACVHRREGDCDDXXXXXXXXXXXXXXXXXXXXXXXDINAGDEIGNTPLHVARDAETLEFLLSRGANPNLVAMSRYGG-----GTPLGSYCTLIHR----LETDDRGMR------------NATAKVEALLRYGASVHIRPTTAGDLSFLPHASPATVAAASPILSCAAKNGVPGIVSALL--GAGLDPNER-----DRDG---WAPIHDAVQGDHVDVLRLLLRAGAERDAPTRS------GGW-TPLHLACRYTSVECVVELLRWNASLGPAERPSSFNARAEGSAVHRPGNNETKPIFGVALEDYPPEXXXXXXXXXNGYGKTPAEVVGLKNLAAASTGPAGSGGSGHRADPSLDEXXXXXXXXXXXXXETGDRNTGVGERNAIRRALRREAAWRRRRGAVLVKVCLERQRQLEGAAAT 608          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10523.381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LQT5_ECTSI6.070e-28685.55Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
A0A6H5KST3_9PHAE1.260e-27474.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEN5_9PHAE6.110e-20883.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQT4_ECTSI8.580e-20876.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LI67_ECTSI1.350e-1526.00Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10523contigE-siliculosus-1a_F_contig10523:28..2009 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1668
Model size1668
Exons2
Hectar predicted targeting categoryother localisation
BRITEko00000,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
Ec32 orthologEc-24_002210.1
Ec32 ortholog descriptionAnkyrin repeat
EggNOG OGsCOG0666@1,KOG4177@2759
EggNOG free text desc.response to abiotic stimulus
KEGG koko:K21440
Seed eggNOG ortholog2880.D8LQT5
Seed ortholog evalue5.8e-228
Seed ortholog score797.0
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927554.7344222-CDS-E-siliculosus-1a_F_contig10523:27..2811622927554.7344222-CDS-E-siliculosus-1a_F_contig10523:27..281Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10523 28..281 -
1696318583.3279266-CDS-E-siliculosus-1a_F_contig10523:27..2811696318583.3279266-CDS-E-siliculosus-1a_F_contig10523:27..281Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10523 28..281 -
1622927554.7454648-CDS-E-siliculosus-1a_F_contig10523:595..20091622927554.7454648-CDS-E-siliculosus-1a_F_contig10523:595..2009Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10523 596..2009 -
1696318583.3471568-CDS-E-siliculosus-1a_F_contig10523:595..20091696318583.3471568-CDS-E-siliculosus-1a_F_contig10523:595..2009Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10523 596..2009 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10523.381.1prot_E-siliculosus-1a_F_contig10523.381.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig10523 28..2009 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig10523.381.1

>prot_E-siliculosus-1a_F_contig10523.381.1 ID=prot_E-siliculosus-1a_F_contig10523.381.1|Name=mRNA_E-siliculosus-1a_F_contig10523.381.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=556bp
MAQNTPLPAAAPLHDAAGVGDAVAVAGLLKDGADRNARVDREGYSYSDGA
TALHIAAREDHLSVAVALLAAGAWPDGRASDEYCDDPTPLHEASARGGVD
VAKALLKAGAGNDLFASFGADGPFLTALDLAVENGHLEVVRTLAEAGADV
NLLYEDGCDEIPPLVTAAKQGNVDVALVLLDAGADVNGFGHDGFSALHQA
KDVRVMEVLLDAGADIEQGITTDYDSHGCDEATPIGWLCLKTHQRFSPLQ
SVGYGLEVGAAGSSEDEIGRATAMVQLLLSRGAKIDSKAGCVGHCLRTGA
RGPPLSAAVYNGTTAICAALIDNGADLDATDWELQDFDADGDVKIRPIHD
AARFGDVDILRLLLVAGAGANSLSNFRRGDDLGRWGTPLHVACRYSQPQC
VRELLRWGADVWVEEKQSSGEEEEEGEQEKAPCECESCLPQLAGCGKTPA
EVIGLRDVVTNEEINARPSDSTTVGDGDEIRRELLWWRRCAVVLLAARLA
KRVSADGGTTTGVSSANAVQRSQVFADDELLAIAGRMANLGGSRQGAFRH
IVTFL*
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mRNA from alignment at E-siliculosus-1a_F_contig10523:28..2009-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10523.381.1 ID=mRNA_E-siliculosus-1a_F_contig10523.381.1|Name=mRNA_E-siliculosus-1a_F_contig10523.381.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1982bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10523:28..2009- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCGCAGAACACGCCCTTGCCGGCCGCAGCACCGCTCCACGACGCCGC CGGTGTCGGTGACGCCGTGGCTGTAGCCGGCTTGCTGAAAGACGGCGCTG ACCGTAACGCCAGAGTCGATCGCGAAGGCTATTCATACAGCGATGGAGCA ACCGCCCTCCACATTGCCGCAAGGGAAGATCATCTGTCAGTAGCTGTGGC TCTGCTCGCGGCAGGAGCATGGCCAGACGGTCGAGCGAGTGACGAATATT GCGACGATCCAACTCCACTCCACGAGGCCTCCGCGCGGGGGGGTGTTGAT GTCGCCAAGGCTCTCTTGAAAGCGGGAGCGGGAAATGATCTTTTTGCCTC CTTCGGCGCGGACGGACCTTTCCTCACCGCCCTGGATCTCGCAGTGGAAA ACGGTCACCTGGAGGTGGTGCGTACGCTGGCCGAGGCCGGAGCAGATGTC AACCTTCTCTACGAGGACGGCTGTGACGAAATCCCCCCTCTGGTTACTGC CGCGAAACAGGGGAATGTAGATGTGGCGCTCGTCCTGCTTGATGCTGGGG CTGACGTGAACGGCTTTGGGCACGACGGATTTTCCGCCTTGCACCAAGCG AAAGACGTCCGTGTAATGGAGGTTCTGCTCGACGCCGGGGCAGACATTGA GCAAGGCATTACTACGGACTACGACAGCCACGGGTGTGACGAAGCTACCC CGATCGGCTGGCTGTGTCTGAAGACGCACCAGCGCTTCTCCCCTCTGCAG AGTGTGGGTTACGGATTGGAGGTCGGGGCTGCCGGTTCCTCGGAGGACGA GATCGGGCGAGCAACGGCAATGGTTCAACTGCTTCTTAGTCGCGGAGCAA AGATCGACTCGAAAGCAGGATGCGTGGGGCACTGCCTGCGCACAGGAGCC CGCGGACCCCCTCTGTCTGCGGCAGTGTACAACGGTACCACGGCAATCTG TGCAGCTCTCATCGACAACGGGGCCGACCTGGATGCAACGGACTGGGAGC TCCAAGACTTCGACGCCGACGGCGATGTCAAGATTCGCCCGATCCATGAC GCGGCCCGCTTTGGGGACGTGGACATCCTGCGTCTACTTCTTGTCGCCGG TGCGGGTGCGAATAGCTTGTCGAACTTCCGGCGGGGTGATGATCTCGGGC GGTGGGGTACACCGTTGCACGTAGCGTGTCGCTACTCGCAGCCGCAGTGT GTTCGTGAGCTTCTTCGGTGGGGAGCGGACGTGTGGGTGGAGGAGAAACA ATCCAGCGGGGAGGAGGAGGAGGAGGGAGAGCAGGAGAAAGCACCCTGTG AATGCGAGTCATGTTTGCCGCAATTAGCTGGTTGCGGCAAGACTCCGGCA GAAGTGATCGGTCTGCGGGATGTGGTAACCAATGAGGAGATCAATGCCAG GCCATCGGACAGCAGTGAGTCAACTCTGCGCTTCGGTTGTATTTTGTGTA TGGGCGAGAATCGTTTCGCGTGCTCTTGGTATGTACACAAGCCCCGCACG CTCGCTCCGCCGCTGCCCCGCCGTACCGTCCATACAACTTTTCCGACCGC ACAGCCGTACTACAATAGCAACACACGCCGCAGACGGGTGTACGATCGTG CCGTCTCCGCTCGAAACTTCTCAGGTGTCTGTCGGAGCATTTTTCACGTC TTGCCTTTGATTCTTGTGCGATTCCCGAAACATTTTGCCGCCCCGCCCCC CCGATATCTGCACCCTCCCCACTTCCAGCAACCGTCGGAGACGGCGACGA AATTCGTCGCGAGCTGCTTTGGTGGAGGAGGTGCGCGGTAGTTCTGCTGG CAGCTCGCCTGGCCAAGCGGGTATCTGCGGATGGCGGAACGACCACAGGT GTGTCGTCCGCCAACGCTGTCCAGCGGTCGCAGGTGTTTGCAGACGACGA GCTGCTAGCTATTGCCGGAAGGATGGCCAACCTGGGCGGTTCGCGCCAGG GGGCGTTTCGCCACATCGTCACGTTTTTGTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10523:28..2009-

>mRNA_E-siliculosus-1a_F_contig10523.381.1 ID=mRNA_E-siliculosus-1a_F_contig10523.381.1|Name=mRNA_E-siliculosus-1a_F_contig10523.381.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3336bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10523:28..2009- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCGCAGAACACGCCCTTGCCGGCCGCAGCACCGCTCCACGACGCCGC
CGGTGTCGGTGACGCCGTGGCTGTAGCCGGCTTGCTGAAAGACGGCGCTG
ACCGTAACGCCAGAGTCGATCGCGAAGGCTATTCATACAGCGATGGAGCA
ACCGCCCTCCACATTGCCGCAAGGGAAGATCATCTGTCAGTAGCTGTGGC
TCTGCTCGCGGCAGGAGCATGGCCAGACGGTCGAGCGAGTGACGAATATT
GCGACGATCCAACTCCACTCCACGAGGCCTCCGCGCGGGGGGGTGTTGAT
GTCGCCAAGGCTCTCTTGAAAGCGGGAGCGGGAAATGATCTTTTTGCCTC
CTTCGGCGCGGACGGACCTTTCCTCACCGCCCTGGATCTCGCAGTGGAAA
ACGGTCACCTGGAGGTGGTGCGTACGCTGGCCGAGGCCGGAGCAGATGTC
AACCTTCTCTACGAGGACGGCTGTGACGAAATCCCCCCTCTGGTTACTGC
CGCGAAACAGGGGAATGTAGATGTGGCGCTCGTCCTGCTTGATGCTGGGG
CTGACGTGAACGGCTTTGGGCACGACGGATTTTCCGCCTTGCACCAAGCG
AAAGACGTCCGTGTAATGGAGGTTCTGCTCGACGCCGGGGCAGACATTGA
GCAAGGCATTACTACGGACTACGACAGCCACGGGTGTGACGAAGCTACCC
CGATCGGCTGGCTGTGTCTGAAGACGCACCAGCGCTTCTCCCCTCTGCAG
AGTGTGGGTTACGGATTGGAGGTCGGGGCTGCCGGTTCCTCGGAGGACGA
GATCGGGCGAGCAACGGCAATGGTTCAACTGCTTCTTAGTCGCGGAGCAA
AGATCGACTCGAAAGCAGGATGCGTGGGGCACTGCCTGCGCACAGGAGCC
CGCGGACCCCCTCTGTCTGCGGCAGTGTACAACGGTACCACGGCAATCTG
TGCAGCTCTCATCGACAACGGGGCCGACCTGGATGCAACGGACTGGGAGC
TCCAAGACTTCGACGCCGACGGCGATGTCAAGATTCGCCCGATCCATGAC
GCGGCCCGCTTTGGGGACGTGGACATCCTGCGTCTACTTCTTGTCGCCGG
TGCGGGTGCGAATAGCTTGTCGAACTTCCGGCGGGGTGATGATCTCGGGC
GGTGGGGTACACCGTTGCACGTAGCGTGTCGCTACTCGCAGCCGCAGTGT
GTTCGTGAGCTTCTTCGGTGGGGAGCGGACGTGTGGGTGGAGGAGAAACA
ATCCAGCGGGGAGGAGGAGGAGGAGGGAGAGCAGGAGAAAGCACCCTGTG
AATGCGAGTCATGTTTGCCGCAATTAGCTGGTTGCGGCAAGACTCCGGCA
GAAGTGATCGGTCTGCGGGATGTGGTAACCAATGAGGAGATCAATGCCAG
GCCATCGGACAGCAATGGCGCAGAACACGCCCTTGCCGGCCGCAGCACCG
CTCCACGACGCCGCCGGTGTCGGTGACGCCGTGGCTGTAGCCGGCTTGCT
GAAAGACGGCGCTGACCGTAACGCCAGAGTCGATCGCGAAGGCTATTCAT
ACAGCGATGGAGCAACCGCCCTCCACATTGCCGCAAGGGAAGATCATCTG
TCAGTAGCTGTGGCTCTGCTCGCGGCAGGAGCATGGCCAGACGGTCGAGC
GAGTGACGAATATTGCGACGATCCAACTCCACTCCACGAGGCCTCCGCGC
GGGGGGGTGTTGATGTCGCCAAGGCTCTCTTGAAAGCGGGAGCGGGAAAT
GATCTTTTTGCCTCCTTCGGCGCGGACGGACCTTTCCTCACCGCCCTGGA
TCTCGCAGTGGAAAACGGTCACCTGGAGGTGGTGCGTACGCTGGCCGAGG
CCGGAGCAGATGTCAACCTTCTCTACGAGGACGGCTGTGACGAAATCCCC
CCTCTGGTTACTGCCGCGAAACAGGGGAATGTAGATGTGGCGCTCGTCCT
GCTTGATGCTGGGGCTGACGTGAACGGCTTTGGGCACGACGGATTTTCCG
CCTTGCACCAAGCGAAAGACGTCCGTGTAATGGAGGTTCTGCTCGACGCC
GGGGCAGACATTGAGCAAGGCATTACTACGGACTACGACAGCCACGGGTG
TGACGAAGCTACCCCGATCGGCTGGCTGTGTCTGAAGACGCACCAGCGCT
TCTCCCCTCTGCAGAGTGTGGGTTACGGATTGGAGGTCGGGGCTGCCGGT
TCCTCGGAGGACGAGATCGGGCGAGCAACGGCAATGGTTCAACTGCTTCT
TAGTCGCGGAGCAAAGATCGACTCGAAAGCAGGATGCGTGGGGCACTGCC
TGCGCACAGGAGCCCGCGGACCCCCTCTGTCTGCGGCAGTGTACAACGGT
ACCACGGCAATCTGTGCAGCTCTCATCGACAACGGGGCCGACCTGGATGC
AACGGACTGGGAGCTCCAAGACTTCGACGCCGACGGCGATGTCAAGATTC
GCCCGATCCATGACGCGGCCCGCTTTGGGGACGTGGACATCCTGCGTCTA
CTTCTTGTCGCCGGTGCGGGTGCGAATAGCTTGTCGAACTTCCGGCGGGG
TGATGATCTCGGGCGGTGGGGTACACCGTTGCACGTAGCGTGTCGCTACT
CGCAGCCGCAGTGTGTTCGTGAGCTTCTTCGGTGGGGAGCGGACGTGTGG
GTGGAGGAGAAACAATCCAGCGGGGAGGAGGAGGAGGAGGGAGAGCAGGA
GAAAGCACCCTGTGAATGCGAGTCATGTTTGCCGCAATTAGCTGGTTGCG
GCAAGACTCCGGCAGAAGTGATCGGTCTGCGGGATGTGGTAACCAATGAG
GAGATCAATGCCAGGCCATCGGACAGCACAACCGTCGGAGACGGCGACGA
AATTCGTCGCGAGCTGCTTTGGTGGAGGAGGTGCGCGGTAGTTCTGCTGG
CAGCTCGCCTGGCCAAGCGGGTATCTGCGGATGGCGGAACGACCACAGGT
GTGTCGTCCGCCAACGCTGTCCAGCGGTCGCAGGTGTTTGCAGACGACGA
GCTGCTAGCTATTGCCGGAAGGATGGCCAACCTGGGCGGTTCGCGCCAGG
GGGCGTTTCGCCACATCGTCACGTTTTTGTAACAACCGTCGGAGACGGCG
ACGAAATTCGTCGCGAGCTGCTTTGGTGGAGGAGGTGCGCGGTAGTTCTG
CTGGCAGCTCGCCTGGCCAAGCGGGTATCTGCGGATGGCGGAACGACCAC
AGGTGTGTCGTCCGCCAACGCTGTCCAGCGGTCGCAGGTGTTTGCAGACG
ACGAGCTGCTAGCTATTGCCGGAAGGATGGCCAACCTGGGCGGTTCGCGC
CAGGGGGCGTTTCGCCACATCGTCACGTTTTTGTAA
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