mRNA_E-siliculosus-1a_F_contig1052.380.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1052.380.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1052.380.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1052.380.1 vs. uniprot
Match: D8LG40_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG40_ECTSI)

HSP 1 Score: 568 bits (1465), Expect = 9.890e-197
Identity = 346/378 (91.53%), Postives = 350/378 (92.59%), Query Frame = 1

Query:   91 MSRSRADFESEEFNEESPLSKKPRLSSGIGDDAFEGLTSYGNGDGGGSTFAINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-CKNKKKPWKVHASAGGGKMHDANLYRHYRPDFRELAREYPDTFGPHVRDDPDTGRATIDWADPAAMRELTRVMLRHDFGLREWDAPLDRLCPPVANRLNYVCWLSDLMKLSPXXXXXXXXXXXXXXXXXXXXXXXXXXMNSAQRNLLLYGTTRGVEG-DGGEAMAVCDDXXXXXXXXLDQATGGPKKPSRRGVDVGTGASCIYPLLGARVAGWSFLATEIDPVSAEWAEKNVRSNDLQEQVEVRLVPSPADGGDDEASPGPLLAALREEDGDFDFSMTNPPFFESADEV 1218
            MSRSRADFESEEFNEESPLSKK RLSSGIGDDAFEGLTSYGNGDGGGSTFAINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A CKNKKKPWKVHASAGGGKMHDANLYRHYRPDFRELAREYPDTFGPHVRDDPDTGRA IDWADPAAMRELTRVMLRHDFGLREWDAPLDRLCPPVANRLNYVCWLSDLMKLSP         XXXXXXXXXXXXXXXX MN AQRNLLLYGTTRGVE  DGGE MAVCDD        LDQATGG KKPSRRGVDVGTGASCIYPLLGA+VAGWSFLATEIDPVSAEWAEKNVRSNDLQE++EVRLVPSPAD GDDEA+PGPLLAALREEDGDFDFSMTNPPFFESADEV
Sbjct:    1 MSRSRADFESEEFNEESPLSKKRRLSSGIGDDAFEGLTSYGNGDGGGSTFAINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAVCKNKKKPWKVHASAGGGKMHDANLYRHYRPDFRELAREYPDTFGPHVRDDPDTGRAAIDWADPAAMRELTRVMLRHDFGLREWDAPLDRLCPPVANRLNYVCWLSDLMKLSPPSSVSARRHXXXXXXXXXXXXXXXX-MNLAQRNLLLYGTTRGVEEEDGGEGMAVCDDNDDDVDGDLDQATGGAKKPSRRGVDVGTGASCIYPLLGAKVAGWSFLATEIDPVSAEWAEKNVRSNDLQEKIEVRLVPSPADSGDDEAAPGPLLAALREEDGDFDFSMTNPPFFESADEV 377

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BLAST of mRNA_E-siliculosus-1a_F_contig1052.380.1 vs. uniprot
Match: W7TD89_9STRA (Methyltransferase 10 domain containing n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TD89_9STRA)

HSP 1 Score: 162 bits (411), Expect = 5.740e-41
Identity = 108/292 (36.99%), Postives = 138/292 (47.26%), Query Frame = 1

Query:  406 KMHDANLYRHYRPDFRELAREYPDTFGP---HVRDDPDTGRATIDWADPAAMRELTRVMLRHDFGLREWDAPLDRLCPPVANRLNYVCWLSDLMKLSPXXXXXXXXXXXXXXXXXXXXXXXXXXMNSAQRNLLLYGTTRGVEGDGGEAMAVCDDXXXXXXXXLDQATGGPKKPSRRGVDVGTGASCIYPLLGARVAGWSFLATEIDPVSAEWAEKNVRSNDLQEQVEVRLVPSPADGGDDEASP------------GPLLAALRE----EDGDFDFSMTNPPFFESADEVRA 1224
            K H  + YR YRPDF  LAR YPDTFG    ++ DD     A IDW DP + R LT+ +LRHDFGL EWD PL+RLCPPV NRLNYVCW+ DL+ L                                                GG   +                     +   RG+DVGTGAS IYPLLG ++  WSFL T+IDP + E A  NVR N +++++ ++LV S  D  +  +              GP+  AL       + + DF M NPPFF S DE+ +
Sbjct:   29 KFHQDSKYRGYRPDFAALARLYPDTFGHLVIYLNDD--KSEALIDWKDPISTRALTKTLLRHDFGL-EWDIPLERLCPPVPNRLNYVCWVKDLLSL------------------------------------------------GGSDTS-------------------QSRTGIRGLDVGTGASAIYPLLGCKLHDWSFLGTDIDPEALEAASANVRENHMEDRISLQLV-SRVDYSELSSFSFTALQTGAGSVRGPIQTALDAAGMGSEYELDFVMCNPPFFASLDEIHS 249

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BLAST of mRNA_E-siliculosus-1a_F_contig1052.380.1 vs. uniprot
Match: W2PG03_PHYPN (U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PG03_PHYPN)

HSP 1 Score: 141 bits (355), Expect = 9.230e-35
Identity = 97/276 (35.14%), Postives = 133/276 (48.19%), Query Frame = 1

Query:  400 GGKMHDANLYRHYRPDFRELAREYPDTFGPHVRDDPDTG-RATIDWADPAAMRELTRVMLRHDFGLREWDAPLDRLCPPVANRLNYVCWLSDLMKLSPXXXXXXXXXXXXXXXXXXXXXXXXXXMNSAQRNLLLYGTTRGVEGDGGEAMAVCDDXXXXXXXXLDQATGGPKKPSRRGVDVGTGASCIYPLLGARVAGWSFLATEIDPVSAEWAEKNVRSNDLQEQVEVRLVPSPADGGDDEASPGPLLAALREEDGD--FDFSMTNPPFFESADEV 1218
            G   HD N Y+   PDF  L  +YP+ F  ++R+  D   RA++ W DP A+RELT+ +L HDFGLR WD P++RLCPP+ NRLNY+ W+ DL+                                 AQ N   +   R       E                             G+DVGTGA+CIY LLGA ++ W F+ATEIDPVS E A++N+ SN L+  + ++   +      D+     LL  L +E  +  FDF M NPPFF++  E 
Sbjct:   13 GALAHDRNRYKDNPPDFYALGEQYPE-FKQYLRNVDDARCRASLAWDDPFAVRELTKTLLLHDFGLR-WDIPINRLCPPLPNRLNYLHWIEDLL---------------------------------AQAN---WNGKRQTHQKSTEVAV-------------------------SGIDVGTGANCIYALLGATMSKWKFIATEIDPVSYECAKENITSNQLETLISIKQTHT------DKL----LLEPLEDEPPERKFDFVMCNPPFFDNMKEA 215

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BLAST of mRNA_E-siliculosus-1a_F_contig1052.380.1 vs. uniprot
Match: A0A7S2TVK9_9EUKA (U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TVK9_9EUKA)

HSP 1 Score: 143 bits (361), Expect = 1.120e-34
Identity = 98/289 (33.91%), Postives = 131/289 (45.33%), Query Frame = 1

Query:  358 KNKKKPWKVHASAGGGKMHDANLYRHYRPDFRELAREYPDTFGPHVRDDPDTGRATIDWADPAAMRELTRVMLRHDFGLREWDAPLDRLCPPVANRLNYVCWLSDLMKLSPXXXXXXXXXXXXXXXXXXXXXXXXXXMNSAQRNLLLYGTTRGVEGDGGEAMAVCDDXXXXXXXXLDQATGGPKKPSRRGVDVGTGASCIYPLLGARVA-GWSFLATEIDPVSAEWAEKNVRSNDLQEQVEVRLVPSPADGGDDEASPGPLLAALREEDGDFDFSMTNPPFFESADEVR 1221
            K K K   V  S+   +MH  N +    PDF  LA +Y D F  HV+ +P T R  I + DP A+  L R +++  FGL EW+ P+DRLCPP++NRLNY+ W+ DL+KL+                                                G A AV                         G D+GTGASCIYPLLG  V   W F+AT+ID  S E A KNV  N+L+ ++++R V               +  ALR+ DG   F M NPPFF SA +++
Sbjct:   13 KKKAKGGWVSISSNNARMHPRNPFNGKEPDFSALAAKY-DFFANHVKVNPKTQRPYIKYKDPKAVICLNRALMKDTFGL-EWNVPIDRLCPPISNRLNYILWIQDLLKLNAPLS--------------------------------------------GNASAV-------------------------GFDIGTGASCIYPLLGTAVEKNWRFIATDIDDKSLESARKNVVGNNLETRIDLRKVNRSVR----------IAGALRDSDGPLAFCMCNPPFFASALDIK 220

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BLAST of mRNA_E-siliculosus-1a_F_contig1052.380.1 vs. uniprot
Match: UPI001B889072 (RNA N6-adenosine-methyltransferase METTL16-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B889072)

HSP 1 Score: 144 bits (364), Expect = 3.500e-34
Identity = 91/273 (33.33%), Postives = 130/273 (47.62%), Query Frame = 1

Query:  409 MHDANLYRHYRPDFRELAREYPDTFGPHVRDDPDTGRATIDWADPAAMRELTRVMLRHDFGLREWDAPLDRLCPPVANRLNYVCWLSDLMKLSPXXXXXXXXXXXXXXXXXXXXXXXXXXMNSAQRNLLLYGTTRGVEGDGGEAMAVCDDXXXXXXXXLDQATGGPKKPSRRGVDVGTGASCIYPLLGARVAGWSFLATEIDPVSAEWAEKNVRSNDLQEQVEVRLVPSPADGGDDEASPGPLLAALREEDGDFDFSMTNPPFFESADEVRAI 1227
            MH  N YR+ +P+F++LA EYP+ F  H   D DTG+  +D+ DP+A+R LT+ +L+HDF L + D P DRL P V  RLNY+ W+ D++                                         G T   EGD                               RG+D+GTG+SC+YPLLG R+  WSFLATE+DP +A +A  NV  N ++  ++V+ V          +    LLAA+++    + F M NPPFF    E +A+
Sbjct:    7 MHPRNKYRNKKPNFKDLASEYPE-FAKHTTRDDDTGKVHLDFKDPSALRALTKTLLKHDFQL-DIDLPSDRLVPTVPLRLNYIHWIEDIL-----------------------------------------GDT---EGD------------------------------IRGIDIGTGSSCVYPLLGCRLNNWSFLATEMDPQNAHYATNNVEKNHMENMIKVKKV----------SKGNILLAAVKDSTESYHFCMCNPPFFADHLEAQAV 193

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BLAST of mRNA_E-siliculosus-1a_F_contig1052.380.1 vs. uniprot
Match: A0A835YSM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM3_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.870e-33
Identity = 84/207 (40.58%), Postives = 102/207 (49.28%), Query Frame = 1

Query:  598 EWDAPLDRLCPPVANRLNYVCWLSDLMKLSPXXXXXXXXXXXXXXXXXXXXXXXXXXMNSAQRNLLLYGTTRGVEGDGGEAMAVCDDXXXXXXXXLDQATGGPKKPSRRGVDVGTGASCIYPLLGARVAGWSFLATEIDPVSAEWAEKNVRSNDLQEQVEVRLVPSPADGGDDEASPGPLLAALREEDGDFDFSMTNPPFFESADEV 1218
            EWD PLDRLCPPV NRLNY+CWLSDL+ L                                          +     G +A+A  D                P     R +D+GTGASCIYPLLG R  GWSF+AT+ID  SA WA +NV  N L+  +EVR VP+        A  GP+L A+ ++DG FDF MTNPPFF S +E 
Sbjct:    9 EWDMPLDRLCPPVPNRLNYLCWLSDLLALRK----------------------------------------QSASPGGADAVAADDQ---------------PAGAMVRVLDIGTGASCIYPLLGHRFLGWSFVATDIDAESARWARQNVTRNGLEAAIEVREVPAAT------AERGPVLTAMGDDDGSFDFVMTNPPFFASMEEA 154

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BLAST of mRNA_E-siliculosus-1a_F_contig1052.380.1 vs. uniprot
Match: W4FKW2_9STRA (RRM domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FKW2_9STRA)

HSP 1 Score: 142 bits (358), Expect = 4.370e-33
Identity = 92/270 (34.07%), Postives = 124/270 (45.93%), Query Frame = 1

Query:  409 MHDANLYRHYRPDFRELAREYPDTFGPHVRDDPDTGRATIDWADPAAMRELTRVMLRHDFGLREWDAPLDRLCPPVANRLNYVCWLSDLMKLSPXXXXXXXXXXXXXXXXXXXXXXXXXXMNSAQRNLLLYGTTRGVEGDGGEAMAVCDDXXXXXXXXLDQATGGPKKPSRRGVDVGTGASCIYPLLGARVAGWSFLATEIDPVSAEWAEKNVRSNDLQEQVEVRLVPSPADGGDDEASPGPLLAALREEDGDFDFSMTNPPFFESADEV 1218
            +H  N+YR+  PDF+ LA+ YP +  P+V +  + G  T+ W+DP A RELTR +L  DFG+  W  PL+RLCPP+ NRLNY+ W+ DL+  S                                                  +    +D                      GVD+GTGAS IYPLLG  +  W FLAT+ID  S E+A  N+RSN L+  + +  V   ADG D    P   +      DG   F+M NPPFF+S D+ 
Sbjct:   16 IHPRNMYRN-PPDFKALAKAYP-SLQPYVHES-NIGHTTLKWSDPQAARELTRALLHRDFGITTWHVPLNRLCPPLPNRLNYIHWIEDLILFSQ------------------------------------------------SSYVSTEDAPIW------------------GVDIGTGASVIYPLLGHSLNQWRFLATDIDAESIEYAAANLRSNHLEHVIHLETV---ADGHDASILPTASIQRRCRHDGPVLFTMCNPPFFDSIDQA 213

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BLAST of mRNA_E-siliculosus-1a_F_contig1052.380.1 vs. uniprot
Match: A0A7S0HCW6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HCW6_9CRYP)

HSP 1 Score: 139 bits (351), Expect = 5.270e-33
Identity = 93/280 (33.21%), Postives = 133/280 (47.50%), Query Frame = 1

Query:  385 HASAGGGKMHDANLYRHYRPDFRELAREYPDTFGPHVRDDPDTGRATIDWADPAAMRELTRVMLRHDFGLREWDAPLDRLCPPVANRLNYVCWLSDLMKLSPXXXXXXXXXXXXXXXXXXXXXXXXXXMNSAQRNLLLYGTTRGVEGDGGEAMAVCDDXXXXXXXXLDQATGGPKKPSRRGVDVGTGASCIYPLLGARVA-GWSFLATEIDPVSAEWAEKNVRSNDLQEQVEVRLVPSPADGGDDEASPGPLLAALREEDGDFDFSMTNPPFFESADEVR 1221
            HA     +MH  N+Y   +PDF +LA++YP +F  H+    D G++ ++W D  A  ELT+ +L+ DF +  WD P   LCPP+  RLNY+ W+ DL                                        L GT   VE    +++A+                     P  RGVD+G GA+CIYPLLG R   GW FL ++I+  + E A  NV+ N L+  +++RL+         +     L+  L+EEDG+FDF M NPPFF S DE +
Sbjct:  107 HAGDFDNRMHPRNIYFRKQPDFAKLAQKYP-SFSKHMIQQKD-GKSLLNWKDAQAHIELTKTLLQEDFQI-SWDIPPHFLCPPLPQRLNYIHWIEDL----------------------------------------LAGTIE-VETKPADSLAI--------------------PPHVRGVDIGVGANCIYPLLGVRTQPGWKFLGSDINGTALECARANVQRNGLEGSIDLRLM---------DRQKRLLVDLLKEEDGEFDFVMCNPPFFASMDEAK 313

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BLAST of mRNA_E-siliculosus-1a_F_contig1052.380.1 vs. uniprot
Match: A0A7S4PMX9_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PMX9_GUITH)

HSP 1 Score: 138 bits (348), Expect = 1.650e-32
Identity = 95/280 (33.93%), Postives = 130/280 (46.43%), Query Frame = 1

Query:  385 HASAGGGKMHDANLYRHYRPDFRELAREYPDTFGPHVRDDPDTGRATIDWADPAAMRELTRVMLRHDFGLREWDAPLDRLCPPVANRLNYVCWLSDLMKLSPXXXXXXXXXXXXXXXXXXXXXXXXXXMNSAQRNLLLYGTTRGVEGDGGEAMAVCDDXXXXXXXXLDQATGGPKKPSRRGVDVGTGASCIYPLLGARVA-GWSFLATEIDPVSAEWAEKNVRSNDLQEQVEVRLVPSPADGGDDEASPGPLLAALREEDGDFDFSMTNPPFFESADEVR 1221
            HA     +MH  N+Y   +P+F ELA++YP +F  H+    D G++ ++W D  A  ELT+ +L+ DF +  W  P D LCPP+  RLNY+ W+ DL                                        L G    VE     ++ +                     P  RGVD+G GASCIYPLLG R   GW FL ++I+  S E A +NV+ N L+  +EVRL+ +             L+  L+EEDG+FDF M NPPFF S  E R
Sbjct:   89 HAGDFDDRMHPRNIYFKCQPNFAELAKKYP-SFSKHMIQQ-DDGKSFLNWKDVQAHVELTKTLLQEDFKI-SWSIPPDFLCPPIPQRLNYIHWIEDL----------------------------------------LAGPVE-VETKPAHSLKI--------------------PPQARGVDIGVGASCIYPLLGVRSQPGWKFLGSDINKSSLESARENVKRNGLEGNIEVRLMDN---------KKRLLVDLLKEEDGEFDFVMCNPPFFSSMAEAR 295

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BLAST of mRNA_E-siliculosus-1a_F_contig1052.380.1 vs. uniprot
Match: W2HX29_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2HX29_PHYPR)

HSP 1 Score: 140 bits (352), Expect = 2.660e-32
Identity = 97/276 (35.14%), Postives = 132/276 (47.83%), Query Frame = 1

Query:  400 GGKMHDANLYRHYRPDFRELAREYPDTFGPHVRDDPDTG-RATIDWADPAAMRELTRVMLRHDFGLREWDAPLDRLCPPVANRLNYVCWLSDLMKLSPXXXXXXXXXXXXXXXXXXXXXXXXXXMNSAQRNLLLYGTTRGVEGDGGEAMAVCDDXXXXXXXXLDQATGGPKKPSRRGVDVGTGASCIYPLLGARVAGWSFLATEIDPVSAEWAEKNVRSNDLQEQVEVRLVPSPADGGDDEASPGPLLAALREEDGD--FDFSMTNPPFFESADEV 1218
            G   HD N Y+   PDF  L  +YP+ F  ++R+  D   RA++ W DP A+RELT+ +L HDFGLR WD P++RLCPP+ NRLNY+ W+ DL+                                 AQ N   +   R       E                             G+DVGTGA+CIY LLGA +  W F+ATEIDPVS E A++N+ SN L+  + ++   +      D+     LL  L +E  +  FDF M NPPFF++  E 
Sbjct:  859 GALAHDRNRYKDNPPDFYALGEQYPE-FKQYLRNVDDARCRASLAWDDPFAVRELTKTLLLHDFGLR-WDIPINRLCPPLPNRLNYLHWIEDLL---------------------------------AQAN---WNGKRQTHQKSTEVAV-------------------------SGIDVGTGANCIYALLGATMNKWKFIATEIDPVSYECAKENITSNQLETLISIKQTHT------DKL----LLEPLEDEPPERKFDFVMCNPPFFDNMKEA 1061

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1052.380.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1052.380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LG40_ECTSI	9.890e-197	91.53	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
W7TD89_9STRA	5.740e-41	36.99	Methyltransferase 10 domain containing n=2 Tax=Nan...	[more]
W2PG03_PHYPN	9.230e-35	35.14	U6 small nuclear RNA (adenine-(43)-N(6))-methyltra...	[more]
A0A7S2TVK9_9EUKA	1.120e-34	33.91	U6 small nuclear RNA (adenine-(43)-N(6))-methyltra...	[more]
UPI001B889072	3.500e-34	33.33	RNA N6-adenosine-methyltransferase METTL16-like n=...	[more]
A0A835YSM3_9STRA	2.870e-33	40.58	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
W4FKW2_9STRA	4.370e-33	34.07	RRM domain-containing protein n=1 Tax=Aphanomyces ...	[more]
A0A7S0HCW6_9CRYP	5.270e-33	33.21	Hypothetical protein (Fragment) n=1 Tax=Hanusia ph...	[more]
A0A7S4PMX9_GUITH	1.650e-32	33.93	Hypothetical protein n=1 Tax=Guillardia theta TaxI...	[more]
W2HX29_PHYPR	2.660e-32	35.14	Uncharacterized protein n=7 Tax=Phytophthora paras...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1052	contig	E-siliculosus-1a_F_contig1052:34647..37848 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	0
Cds size	1140
Model size	1230
Exons	4
Ec32 ortholog	Ec-11_002040.2
Ec32 ortholog description	S-adenosyl-L-methionine-dependent methyltransferase
Hectar predicted targeting category	other localisation
BRITE	ko00000,ko01000,ko01002,ko03009,ko03041,ko04121
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	J
EC	2.1.1.181,3.4.19.12
EggNOG OGs	COG3129@1,KOG2912@2759
EggNOG free text desc.	23S rRNA (adenine(1618)-N(6))-methyltransferase activity
GOs	GO:0000154,GO:0000226,GO:0001510,GO:0002119,GO:0002164,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007098,GO:0007275,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008174,GO:0008649,GO:0008757,GO:0008988,GO:0009056,GO:0009057,GO:0009451,GO:0009790,GO:0009791,GO:0009792,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016422,GO:0016433,GO:0016556,GO:0016740,GO:0016741,GO:0017069,GO:0017070,GO:0017148,GO:0019219,GO:0019222,GO:0019439,GO:0022402,GO:0022613,GO:0030629,GO:0031023,GO:0031167,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0032259,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0034248,GO:0034249,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0035613,GO:0040025,GO:0040031,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043484,GO:0043487,GO:0043488,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0045935,GO:0046483,GO:0046700,GO:0048024,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048569,GO:0048731,GO:0048856,GO:0050684,GO:0050779,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0052907,GO:0060255,GO:0061013,GO:0061014,GO:0061157,GO:0065007,GO:0065008,GO:0070475,GO:0071704,GO:0071840,GO:0080009,GO:0080090,GO:0090304,GO:0097159,GO:0120048,GO:0120049,GO:0140098,GO:0140102,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1903311,GO:1903313,GO:2000112,GO:2000113
KEGG Reaction	R07232
KEGG ko	ko:K06970,ko:K11393,ko:K11853,ko:K13119
KEGG rclass	RC00003,RC00335
Preferred name	METTL16
Seed eggNOG ortholog	2880.D8LG40
Seed ortholog evalue	1.6e-160
Seed ortholog score	572.4
Taxonomic scope	Eukaryota

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1052.380.1	prot_E-siliculosus-1a_F_contig1052.380.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1052 34737..37848 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927554.6391892-UTR-E-siliculosus-1a_F_contig1052:34646..34736	1622927554.6391892-UTR-E-siliculosus-1a_F_contig1052:34646..34736	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1052 34647..34736 +
1696318583.2726755-UTR-E-siliculosus-1a_F_contig1052:34646..34736	1696318583.2726755-UTR-E-siliculosus-1a_F_contig1052:34646..34736	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1052 34647..34736 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927554.651754-CDS-E-siliculosus-1a_F_contig1052:34736..34782	1622927554.651754-CDS-E-siliculosus-1a_F_contig1052:34736..34782	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1052 34737..34782 +
1696318583.2853644-CDS-E-siliculosus-1a_F_contig1052:34736..34782	1696318583.2853644-CDS-E-siliculosus-1a_F_contig1052:34736..34782	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1052 34737..34782 +
1622927554.667072-CDS-E-siliculosus-1a_F_contig1052:35370..35709	1622927554.667072-CDS-E-siliculosus-1a_F_contig1052:35370..35709	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1052 35371..35709 +
1696318583.2948053-CDS-E-siliculosus-1a_F_contig1052:35370..35709	1696318583.2948053-CDS-E-siliculosus-1a_F_contig1052:35370..35709	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1052 35371..35709 +
1622927554.680429-CDS-E-siliculosus-1a_F_contig1052:36480..37070	1622927554.680429-CDS-E-siliculosus-1a_F_contig1052:36480..37070	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1052 36481..37070 +
1696318583.3038623-CDS-E-siliculosus-1a_F_contig1052:36480..37070	1696318583.3038623-CDS-E-siliculosus-1a_F_contig1052:36480..37070	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1052 36481..37070 +
1622927554.6910434-CDS-E-siliculosus-1a_F_contig1052:37683..37848	1622927554.6910434-CDS-E-siliculosus-1a_F_contig1052:37683..37848	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1052 37684..37848 +
1696318583.31255-CDS-E-siliculosus-1a_F_contig1052:37683..37848	1696318583.31255-CDS-E-siliculosus-1a_F_contig1052:37683..37848	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1052 37684..37848 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1052:34647..37848+
coding sequence from alignment at E-siliculosus-1a_F_contig1052:34647..37848+

protein sequence of mRNA_E-siliculosus-1a_F_contig1052.380.1

>prot_E-siliculosus-1a_F_contig1052.380.1 ID=prot_E-siliculosus-1a_F_contig1052.380.1|Name=mRNA_E-siliculosus-1a_F_contig1052.380.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=380bp
MSRSRADFESEEFNEESPLSKKPRLSSGIGDDAFEGLTSYGNGDGGGSTF
AINDDDDDALDEGGAAAADAASPDGVGSGGGDGGDTAACKNKKKPWKVHA
SAGGGKMHDANLYRHYRPDFRELAREYPDTFGPHVRDDPDTGRATIDWAD
PAAMRELTRVMLRHDFGLREWDAPLDRLCPPVANRLNYVCWLSDLMKLSP
PPPPVSARRHSSSPEDASGEEGGGGGMNSAQRNLLLYGTTRGVEGDGGEA
MAVCDDDDNDGDGDLDQATGGPKKPSRRGVDVGTGASCIYPLLGARVAGW
SFLATEIDPVSAEWAEKNVRSNDLQEQVEVRLVPSPADGGDDEASPGPLL
AALREEDGDFDFSMTNPPFFESADEVRAIE

mRNA from alignment at E-siliculosus-1a_F_contig1052:34647..37848+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1052.380.1 ID=mRNA_E-siliculosus-1a_F_contig1052.380.1|Name=mRNA_E-siliculosus-1a_F_contig1052.380.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3202bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1052:34647..37848+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCCAGGCCGATCCCACCCAGCACCACCAGCCGCTCAACCACACTGCACCG
CACACACCACGCTTCCCGTGTGTCGTTGTTGTTGTAACCCATGTCGAGAT
CGAGGGCCGACTTCGAAAGCGAGGAGTTCAACGAAGGTGCGGCGAAATTA
GTCCTCGTGTCTCTTGTCTGTCTGTTGTAGCGTCTGTAGGTGCTGCCATA
CCTCCCCTGCTGCTGCTGTCATCGTTTGATTTCAAATCCGACTGACACCA
ATCGTTTTCGAAACACCAGCTTGCCCGTTCCTTCTTTGCTACCGCTTTGC
TGAACACAGCAGTCACTGCTGTCCGTTGTGTCTAAGCCGTGTTCTCTGTT
CGGAGGCGATCGGCGGCTACAGCAGGGTACATGTAGTGAGCATTTGCATA
TCCGCGGTAGCTATGAATGATATTTGGATATATCCGCCTCACCCCCTCCC
TTTCTTGCACACCTGCAGCAGTAAATCCCTCGTGTGTCATGGTCCCGTGG
CGTGTCTCTACCACGAGATACCAAGCAGTATTGCACCCCTGTGATGCGGC
TCAATATGAACGCACAACACTTCTTGTACACGCGAAGTCATTTCACCAGG
TTTTAACCTACAGACATTAGAAGTCAGTACACTAAATTGTGCCCGCCGTT
TTCATCGACGCATAGCCTCCACATCACACCTGCCGCCCACTCTTCCTTCT
CGTCTCCACAACAACGACAACCAGAATCCCCACTGAGCAAGAAGCCAAGA
CTCAGCAGCGGTATCGGCGACGACGCCTTCGAAGGCTTGACCAGCTACGG
GAACGGAGACGGAGGCGGTAGCACCTTCGCCATCAACGACGACGACGACG
ATGCCCTCGACGAAGGCGGCGCTGCTGCTGCTGATGCCGCAAGCCCGGAC
GGAGTCGGCAGCGGTGGCGGTGACGGCGGGGACACAGCAGCTTGCAAGAA
CAAGAAGAAGCCGTGGAAAGTGCATGCCAGTGCCGGCGGCGGGAAAATGC
ACGACGCCAACCTGTACCGTCACTACCGCCCTGACTTCCGTGAACTGGCG
AGGGAGTATCCGGGTGAGCTTTTAGGGTAGAAACTGCCTTCTGCGCAAGG
AACAAAAAAGAAACCCGGTTGTTTGTCTCGACTTTGTCGCGCAGAAGGGG
TGGATACCAGTCGTGTCTGCACTCACATGCACCTGCGCGGCAGCGTATCG
CTTTGAATATCCGTTCTTCTTGAACCTCCACGTCCGTACATAGCGTAGAA
CAGCAGACACGTTGTTCTTCAGTCGCCGATTTTGTCAATATTTTTATATT
TTGGGACATGGGAAACTCACGATTCGGACATTGGTCCTTTCCTACGGACA
GCTAACCATCATGATACGCACCTACACCTCCGCTTCGTGCCCATGTGCGA
CAGGTACCCGGATGACCACAAACGACCCGCCAACCGGTGTACCAACCCCC
TTTGTCAACCACACAATCCCCCGCCCGATTAAATGTATCGCCACACGGCA
CAGCAGTAGTTGCGGATCGCGACACTACGAACGACCTATTTCCGGTCGAT
TTCCCATACACCTGTCGTCCCTCCCATATTGTCCGTCGAATCTTCTGAGG
CGTTCTCAACGGGACCGCCTACAATACGCAGGATTTTAGGAGTATCTAGA
AAAAGAATAGGGAGGGGGCACGCAGACCCTATCCCTAACCCTAACCCTAA
CCCCAAAGCACGGATTCAATACTTTATCCCGTATGTTTGCTTAATCGATT
TTGCTGCGTAGACTATTGCTGTCTCAACGCGAACGGTTTCCCTCCCTCTG
CTCGAAAACCACCCACCATGTGCACCATCACCAGACACGTTCGGTCCCCA
CGTTCGGGACGACCCGGACACGGGTCGCGCGACGATCGACTGGGCGGACC
CCGCCGCCATGAGGGAGCTGACCCGCGTCATGCTCCGGCACGACTTCGGG
CTGCGCGAGTGGGACGCGCCCCTCGACCGCCTGTGCCCCCCCGTGGCCAA
CCGCCTCAACTACGTCTGCTGGCTCTCGGACCTCATGAAGCTCTCGCCGC
CGCCGCCGCCGGTGTCAGCGCGGCGGCATTCTTCGTCGCCGGAGGATGCG
TCAGGCGAGGAGGGTGGGGGAGGGGGGATGAACTCGGCGCAGAGGAACCT
GCTTCTGTACGGGACAACGCGCGGGGTGGAGGGGGATGGCGGGGAAGCCA
TGGCCGTGTGCGACGACGACGACAACGACGGCGACGGCGACTTGGACCAG
GCGACGGGGGGGCCGAAGAAGCCTAGCCGTAGAGGCGTCGACGTTGGCAC
GGGGGCGTCTTGCATCTACCCCCTGCTGGGGGCAAGGGTGGCGGGGTGGT
CGTTCCTGGCGACCGAGATAGACCCCGTTTCGGCCGAGTGGGCGGAGAAG
AACGTTCGTTCCAACGACTTGCAGGTACGCCGAGGACGGGTAGAGGTTTG
GCGAAGAGGCTCCCTTGTGTGGGGTTGGGCGGGGTGTCGACTCCCAACAA
ACATATATAGTGTGTGCTCAAAGTGTTTCGTGTTTCGTTTGTGTGACGAA
ACCTTCGAACAGCGCTGGCGTCTTGGAGGCAGATAGTTGTTTCCCCGCCG
GTTTTGAGGCTTTCGGAATGCGTAGCATGCGATCGCAGGAATACCTTGGT
AGGCGCCCTGTGTGATGTCGGCAGCCTGAGTATTGAAGTAGCGTTGGCTA
TCTCCCGCTTACCAACATTTGACAGCGAGTCCTTGGTGCATGTACCTGCA
GGAAATACAGAACGCCCGGTCACCACCCCTGAGCCCCTTTCAGCACTCAA
ACGATGTGGTATGTTGTGGTCGAAGCCGCCATGCCCCGGTTGAGGCTGTC
CAACAACGAGGAATGTGTCGAGAATATTTTTTTGTCCCGCACGCGGATTG
AATTTGGCATGCTTGCGCCGTCATGGCGATCTTCACTCTGATTGTACTTG
GTTATATTTTCGTGCAATCCCCAGTCCCTGCACCCATACCACCGTGCCTC
TTTGGTTGGATGTTTTCCTCCCTCCACAATCTCGAAGGAGCAAGTTGAGG
TTCGGCTTGTCCCTTCGCCTGCGGATGGTGGCGATGACGAGGCTTCGCCC
GGGCCGCTGTTGGCCGCACTGAGAGAAGAAGACGGAGACTTCGACTTCTC
CATGACGAACCCGCCGTTTTTCGAGTCTGCAGATGAGGTGAGAGCCATCG
AG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1052:34647..37848+

>mRNA_E-siliculosus-1a_F_contig1052.380.1 ID=mRNA_E-siliculosus-1a_F_contig1052.380.1|Name=mRNA_E-siliculosus-1a_F_contig1052.380.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2280bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1052:34647..37848+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCGAGATCGAGGGCCGACTTCGAAAGCGAGGAGTTCAACGAAGATGT
CGAGATCGAGGGCCGACTTCGAAAGCGAGGAGTTCAACGAAGAATCCCCA
CTGAGCAAGAAGCCAAGACTCAGCAGCGGTATCGGCGACGACGCCTTCGA
AGGCTTGACCAGCTACGGGAACGGAGACGGAGGCGGTAGCACCTTCGCCA
TCAACGACGACGACGACGATGCCCTCGACGAAGGCGGCGCTGCTGCTGCT
GATGCCGCAAGCCCGGACGGAGTCGGCAGCGGTGGCGGTGACGGCGGGGA
CACAGCAGCTTGCAAGAACAAGAAGAAGCCGTGGAAAGTGCATGCCAGTG
CCGGCGGCGGGAAAATGCACGACGCCAACCTGTACCGTCACTACCGCCCT
GACTTCCGTGAACTGGCGAGGGAGTATCCGGAATCCCCACTGAGCAAGAA
GCCAAGACTCAGCAGCGGTATCGGCGACGACGCCTTCGAAGGCTTGACCA
GCTACGGGAACGGAGACGGAGGCGGTAGCACCTTCGCCATCAACGACGAC
GACGACGATGCCCTCGACGAAGGCGGCGCTGCTGCTGCTGATGCCGCAAG
CCCGGACGGAGTCGGCAGCGGTGGCGGTGACGGCGGGGACACAGCAGCTT
GCAAGAACAAGAAGAAGCCGTGGAAAGTGCATGCCAGTGCCGGCGGCGGG
AAAATGCACGACGCCAACCTGTACCGTCACTACCGCCCTGACTTCCGTGA
ACTGGCGAGGGAGTATCCGGACACGTTCGGTCCCCACGTTCGGGACGACC
CGGACACGGGTCGCGCGACGATCGACTGGGCGGACCCCGCCGCCATGAGG
GAGCTGACCCGCGTCATGCTCCGGCACGACTTCGGGCTGCGCGAGTGGGA
CGCGCCCCTCGACCGCCTGTGCCCCCCCGTGGCCAACCGCCTCAACTACG
TCTGCTGGCTCTCGGACCTCATGAAGCTCTCGCCGCCGCCGCCGCCGGTG
TCAGCGCGGCGGCATTCTTCGTCGCCGGAGGATGCGTCAGGCGAGGAGGG
TGGGGGAGGGGGGATGAACTCGGCGCAGAGGAACCTGCTTCTGTACGGGA
CAACGCGCGGGGTGGAGGGGGATGGCGGGGAAGCCATGGCCGTGTGCGAC
GACGACGACAACGACGGCGACGGCGACTTGGACCAGGCGACGGGGGGGCC
GAAGAAGCCTAGCCGTAGAGGCGTCGACGTTGGCACGGGGGCGTCTTGCA
TCTACCCCCTGCTGGGGGCAAGGGTGGCGGGGTGGTCGTTCCTGGCGACC
GAGATAGACCCCGTTTCGGCCGAGTGGGCGGAGAAGAACGTTCGTTCCAA
CGACTTGCAGACACGTTCGGTCCCCACGTTCGGGACGACCCGGACACGGG
TCGCGCGACGATCGACTGGGCGGACCCCGCCGCCATGAGGGAGCTGACCC
GCGTCATGCTCCGGCACGACTTCGGGCTGCGCGAGTGGGACGCGCCCCTC
GACCGCCTGTGCCCCCCCGTGGCCAACCGCCTCAACTACGTCTGCTGGCT
CTCGGACCTCATGAAGCTCTCGCCGCCGCCGCCGCCGGTGTCAGCGCGGC
GGCATTCTTCGTCGCCGGAGGATGCGTCAGGCGAGGAGGGTGGGGGAGGG
GGGATGAACTCGGCGCAGAGGAACCTGCTTCTGTACGGGACAACGCGCGG
GGTGGAGGGGGATGGCGGGGAAGCCATGGCCGTGTGCGACGACGACGACA
ACGACGGCGACGGCGACTTGGACCAGGCGACGGGGGGGCCGAAGAAGCCT
AGCCGTAGAGGCGTCGACGTTGGCACGGGGGCGTCTTGCATCTACCCCCT
GCTGGGGGCAAGGGTGGCGGGGTGGTCGTTCCTGGCGACCGAGATAGACC
CCGTTTCGGCCGAGTGGGCGGAGAAGAACGTTCGTTCCAACGACTTGCAG
GAGCAAGTTGAGGTTCGGCTTGTCCCTTCGCCTGCGGATGGTGGCGATGA
CGAGGCTTCGCCCGGGCCGCTGTTGGCCGCACTGAGAGAAGAAGACGGAG
ACTTCGACTTCTCCATGACGAACCCGCCGTTTTTCGAGTCTGCAGATGAG
GTGAGAGCCATCGAGGAGCAAGTTGAGGTTCGGCTTGTCCCTTCGCCTGC
GGATGGTGGCGATGACGAGGCTTCGCCCGGGCCGCTGTTGGCCGCACTGA
GAGAAGAAGACGGAGACTTCGACTTCTCCATGACGAACCCGCCGTTTTTC
GAGTCTGCAGATGAGGTGAGAGCCATCGAG