prot_E-siliculosus-1a_F_contig1050.362.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1050.362.1
Unique Nameprot_E-siliculosus-1a_F_contig1050.362.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length911
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1050.362.1 vs. uniprot
Match: A0A6H5JBR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBR8_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 1.510e-32
Identity = 78/100 (78.00%), Postives = 79/100 (79.00%), Query Frame = 0 
Query:  811 DKPWMVRIVRKFGSRNGGSMPEATGAGEGVKRELCDGDVVSEAGIGEHDVAERGREMASLILNDGSSAQGTSPLVSPFMGCRKRRKMMDATTTGATTGKL 910
            DKPWMVRIVRK GSRNGGSMPEATGAGE VKRELCDGD VSEAG+ EHDVAERGR              GTS  VSPFMGCRKRRKMMDA TTGATTGKL
Sbjct: 1308 DKPWMVRIVRKLGSRNGGSMPEATGAGECVKRELCDGDAVSEAGMDEHDVAERGR--------------GTSASVSPFMGCRKRRKMMDALTTGATTGKL 1393
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BLAST of mRNA_E-siliculosus-1a_F_contig1050.362.1 vs. uniprot
Match: D7FZC4_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZC4_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 2.180e-28
Identity = 68/100 (68.00%), Postives = 74/100 (74.00%), Query Frame = 0 
Query:  811 DKPWMVRIVRKFGSRNGGSMPEATGAGEGVKRELCDGDVVSEAGIGEHDVAERGREMASLILNDGSSAQGTSPLVSPFMGCRKRRKMMDATTTGATTGKL 910
            DKPWMVR+ RKFGSRNGGSMPE   AGE VK ELCDGDV SEAGI EHDVAER  E+A + L+   S +    L  PFMGC KRRKMMDAT+T  TTG L
Sbjct:  498 DKPWMVRVFRKFGSRNGGSMPEVKEAGENVKAELCDGDVASEAGIDEHDVAERRPEVAPVPLDGCRSTRSNPVLTPPFMGCGKRRKMMDATSTLPTTGIL 597
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1050.362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBR8_9PHAE1.510e-3278.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZC4_ECTSI2.180e-2868.00EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZC4... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1050contigE-siliculosus-1a_F_contig1050:10402..13134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1050.362.1mRNA_E-siliculosus-1a_F_contig1050.362.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1050 10228..14518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1050.362.1 ID=prot_E-siliculosus-1a_F_contig1050.362.1|Name=mRNA_E-siliculosus-1a_F_contig1050.362.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=911bp
MVCVTNKRCAHPECLKQPTYGMAVRGKAEYCFAHRLEGMEDVRNKKRCAH
PGCGKHPSKGVAGSKVAEYCGPHAKEGMVAVQARCRHPGCPKKASYGVAG
CPRKEALFCKPHAKEGMVSVEGNHCQHQGCYAVAAYGTYGSEKKEFCGRH
ATKDMIGVARPCMKAGCGTARSYGAPGSKAPRFCPQHASEGMVDLSKNSC
GQPGCLLVPSFSVSGSAPATFCRRHATEGMIKIPNKSHRVCEYPDCVRRA
CHGVPGSNDPKFCRQHAEEGMADLFHKICEHQNCVTSASYGVLGSTKAKF
CAKHTEDGMVNVSLRRCGYSGCSGLARFGTVGTKKAEFCPTHASEGMVDL
CKNKCGQPGCLLVPAFSVSGNAPATFCRRHATERMVRIPKNKSHRVCEYP
DCARRACRGVPGSKVPRFCPQHASEGMVDLSKNKCGQPGCLLVPAFSVSG
SSPATFCRRHATEGMIRIPNKSHRVCEYPDCARRACRGAPGSKVPRFCPQ
HASEGMVDLSKNKCGQPGCLLVPSFSVSGSAPATFCRRHATEGMIKIPNK
SHRVCEYPDCVRRACHGVPGSKDPKFCRQHAEEGMTDLLHKTCEHQNCVT
SASYGAQGSTKAQFCAKHRGEGMVNVAHRRCGKSGCAGLARFGTVGTKKA
EFCPTHAGEGMVDMKRGTCVHPGCSARAKFAEAGSDKAEHCRQHAREGAV
NVVSKGCAHPGCTKFPSYGAVGSKIPLFCGPHATDGMVTVRGLRCSHPLC
DEWPSFGRAGQKKGDFCERHAKQGMVRIHREKCSLPGCTLLPVFGVRGTS
KAEVCAQHAGDKPWMVRIVRKFGSRNGGSMPEATGAGEGVKRELCDGDVV
SEAGIGEHDVAERGREMASLILNDGSSAQGTSPLVSPFMGCRKRRKMMDA
TTTGATTGKL*
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