prot_E-siliculosus-1a_M_contig991.17797.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig991.17797.1
Unique Nameprot_E-siliculosus-1a_M_contig991.17797.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length78
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig991.17797.1 vs. uniprot
Match: A0A6H5KDT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDT8_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 6.580e-42
Identity = 66/77 (85.71%), Postives = 69/77 (89.61%), Query Frame = 0 
Query:    1 MVGGLRHRRAKMLQAGTRRASLQPHFWVYMRRASRKAPPCKTMMRGSPVTRDPSLLHRQHQVGCCVGHRCRRGDIVR 77
            M+GGLR  RAKMLQAGTRRASLQ  FWV+MRRASRKAP CKTMM+ SP TRDPSLLHRQHQVGCCVGHRCRR DIVR
Sbjct:    4 MIGGLRRGRAKMLQAGTRRASLQRRFWVFMRRASRKAPSCKTMMQDSPATRDPSLLHRQHQVGCCVGHRCRRVDIVR 80
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig991.17797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KDT8_9PHAE6.580e-4285.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig991contigE-siliculosus-1a_M_contig991:415..648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig991.17797.1mRNA_E-siliculosus-1a_M_contig991.17797.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig991 415..648 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig991.17797.1 ID=prot_E-siliculosus-1a_M_contig991.17797.1|Name=mRNA_E-siliculosus-1a_M_contig991.17797.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=78bp
MVGGLRHRRAKMLQAGTRRASLQPHFWVYMRRASRKAPPCKTMMRGSPVT
RDPSLLHRQHQVGCCVGHRCRRGDIVR*
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