mRNA_E-siliculosus-1a_M_contig97.17671.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig97.17671.1
Unique NamemRNA_E-siliculosus-1a_M_contig97.17671.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17671.1 vs. uniprot
Match: A0A6H5L0M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M4_9PHAE)

HSP 1 Score: 529 bits (1363), Expect = 2.030e-181
Identity = 264/308 (85.71%), Postives = 281/308 (91.23%), Query Frame = 1 
Query:    1 MAMRALVLASTVTAXXXXXXXXXXXXSSAAVNLRPESELTSNCFDFPRSNFDRQRSIMGVFGQSPKLLLETGSGAIDFTSHDYPAGERWNLREHLEGVGGDAGKPVVLIWGMFTCPAFQGMGDQPPIPPWDKCGYRDEYDLVETYKDRVAFVHLYGPEPHPTTPATNFDHGVVVNSYWSTVHQPESYEQRLAMVDRVKDLMHPAQAIIPDYMPGNPYSELINPLWCSYGLGARPATAIAQDGTIFYQQEWLHTGDLADELDVFLEGGGDPNAVT-----------RDQHGSLGSASRSSVLPAQGLKR 891
            MAM+ALVLAS V+AXXXXXXXXXX  SSAAVNLRPESELT NCFDFP +NFDRQRS++G++GQSPKLLLETGSGAIDFTSHDYPAGE WNLREHLEGVGGDAGKPVVLIWGMFTCPAFQGMGDQPP PPWDKCGYRDEYDLVETYKDRV FVHLYGPEPHPT PATNFDHGVVVNSYWSTV QP+SYEQRLAMVDRVKDL+HP QAIIPDYMPGNPYS+LINPLWCSYG+GARPATAIAQDGTIFYQQEWLHTGDLA+ELDVFLEG GDP+A             +DQ+GSL SASRSSVLPAQ L++
Sbjct:    1 MAMKALVLASAVSAXXXXXXXXXX--SSAAVNLRPESELTGNCFDFPSNNFDRQRSMIGMYGQSPKLLLETGSGAIDFTSHDYPAGEPWNLREHLEGVGGDAGKPVVLIWGMFTCPAFQGMGDQPPSPPWDKCGYRDEYDLVETYKDRVTFVHLYGPEPHPTAPATNFDHGVVVNSYWSTVPQPKSYEQRLAMVDRVKDLVHPEQAIIPDYMPGNPYSDLINPLWCSYGIGARPATAIAQDGTIFYQQEWLHTGDLANELDVFLEGRGDPDAAAALGGKVGAGALQDQYGSLDSASRSSVLPAQVLRK 306
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17671.1 vs. uniprot
Match: A0A6H5KKN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN7_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 2.150e-85
Identity = 132/236 (55.93%), Postives = 161/236 (68.22%), Query Frame = 1 
Query:   85 AAVNLRPESELTSNCFDFPRSNFDRQRSIMGVFG-QSPKLLLETGSGAIDFTSHDYPAGERWNLREHLEGVGGDAGKPVVLIWGMFTCPAFQGMGDQPPIPPWDKCGYRDEYDLVETYKDRVAFVHLYGPEPHPTTPATNFDHGVVVNSYWSTVHQPESYEQRLAMVDRVKDLMHPAQAIIPDYMPGNPYSELINPLWCSYGLGARPATAIAQDGTIFYQQEWLHTGDLADELDVF 789
            A+  LRPES+LTSNCFDFP +NFDR+ SI  V G  +P L L  G  A+DFT HD   G RWNL E LE  G     PVV++WGMFTCPAFQG G     PPWDKCGYRDEYDLVE Y  +  FVHLYGPEPHP  P TNFD G    ++WS   Q   YE+R+AM  R+   +HP+Q I+ DY+PGNPYSELI P+WCSY +GARP T ++ DG +F+Q+ W H+  +   +D +
Sbjct:  155 ASAELRPESDLTSNCFDFPANNFDRENSIKAVNGGNTPYLPLTVGEDAVDFTLHDLK-GRRWNLGETLERTG----LPVVMVWGMFTCPAFQGYGT---YPPWDKCGYRDEYDLVEAYGGKATFVHLYGPEPHPAMPGTNFDIGTTWQAFWSVFQQATRYEERVAMAQRIGRRIHPSQDILVDYLPGNPYSELIQPVWCSYSMGARPVTVVSPDGKLFFQRGWFHSEHVGRAIDEY 382
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17671.1 vs. uniprot
Match: D8LCJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ3_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 4.930e-85
Identity = 130/236 (55.08%), Postives = 159/236 (67.37%), Query Frame = 1 
Query:   85 AAVNLRPESELTSNCFDFPRSNFDRQRSIMGVFG-QSPKLLLETGSGAIDFTSHDYPAGERWNLREHLEGVGGDAGKPVVLIWGMFTCPAFQGMGDQPPIPPWDKCGYRDEYDLVETYKDRVAFVHLYGPEPHPTTPATNFDHGVVVNSYWSTVHQPESYEQRLAMVDRVKDLMHPAQAIIPDYMPGNPYSELINPLWCSYGLGARPATAIAQDGTIFYQQEWLHTGDLADELDVF 789
            A   LRPE++LTSNCFDFP +NFDR+ SI  V G  +P L L  G  A+DFT HD   G RWNL E LE  G     PVV++WGMF CP FQG G     PPWDKCGYRDEYDLVE Y  +  FVHLYGPEPHP  P TNFD G    ++WS   Q  SY++R AM  R+  L+HP+Q I+ DY+PGNPYSELI P+WCSY +GARP T ++ DG +F+Q+ W H+  +   +D +
Sbjct:  125 ANAELRPEADLTSNCFDFPANNFDRENSIKAVNGGNTPYLPLTVGEDAVDFTLHDLE-GRRWNLGETLERTG----LPVVMVWGMFICPGFQGYGT---YPPWDKCGYRDEYDLVEAYGGKATFVHLYGPEPHPAMPGTNFDIGTTWQAFWSVYPQATSYDERAAMAQRINRLIHPSQDILVDYLPGNPYSELIQPVWCSYSMGARPVTVVSPDGKLFFQRAWFHSEHVGRAIDEY 352
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17671.1 vs. uniprot
Match: A0A6H5JSG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG9_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 5.440e-67
Identity = 108/235 (45.96%), Postives = 149/235 (63.40%), Query Frame = 1 
Query:   94 NLRPESELTSNCFDFPRSNFDRQRSIMGVFGQSPKLLLETGSGAIDFTSHDYPAGERWNLREHLEGVGGDAGKPVVLIWGMFTCPAFQGM-GDQPPIPPWDKCGYRDEYDLVETYKDRVAFVHLYGPEPHPTTPATNFDHGVVVNSYWSTVHQPESYEQRLAMVDRVKDLMHPAQAIIPDYMPGNPYSELINPLWCSYGLGARPATAIAQDGTIFYQQEWLHTGDLADELDVFLE 795
            +L PE+EL +NC++FP  NF +  SI  ++G SP L+ + GS A+DFT HD   G RWNL E L      AGKPVV+I+GM+TCPAFQG+   +     W    Y  E++LVE Y D+  FVH+YGPEPHP  P  NFD G    + WS   QP  Y+ R+    +++ + HP + ++PDY+ GNPYS L  P+WC+Y  GARP+  ++  G+IFYQQEW+ T  L + +D + E
Sbjct:   26 DLLPETELITNCYNFPEENFHKGNSIRDIYGTSPHLVRDLGSPAVDFTLHDLD-GNRWNLGEVLAA---GAGKPVVMIFGMWTCPAFQGLDAAEGSGNTW---AYWHEHNLVEQYGDKAIFVHIYGPEPHPQPPDLNFDSGSFAPNAWSVYRQPVMYDVRVEKAKKIRSITHPDEVVLPDYLTGNPYSSLNQPVWCTYANGARPSVMVSSSGSIFYQQEWMSTEGLENAIDGYWE 253
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17671.1 vs. uniprot
Match: A0A835Z1L4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L4_9STRA)

HSP 1 Score: 222 bits (566), Expect = 6.860e-64
Identity = 113/244 (46.31%), Postives = 142/244 (58.20%), Query Frame = 1 
Query:   85 AAVNLRPESELTSNCFDFPRSNFDRQRSIMGVFGQSPKLLLETGSGAIDFTSHDYPAGERWNLREHLEGVGGDAGKPVVLIWGMFTCPAFQGMGDQPPIPPWDKCGYRDEYDLVETYKDR---VAFVHLYGPEPHPTTPATNFDHGVVVNSYWSTVHQPESYEQRLAMVDRVKDLMHPAQAIIPDYMPGNPYSE-----LINPLWCSYGLGARPATAIAQDGTIFYQQEWLHTGDLADELDVFL 792
            AA  LR  SELT +C+ FP  NF+    I   +G SP ++L+ G+ AIDFT +D   G  W L EHL      A +PV LIWGM TCPAF+G+G      P+D+C Y DE  LV  Y      VAF HL GPEPHP TP TNFD GVV  ++WSTV Q  +Y+ R+AM   V D +HP  A++PD +P  PY +        P+WCSY  GAR A  I  DG +   Q W H GD+A  ++  L
Sbjct:    1 AASQLRDASELTDSCYGFPDDNFNGTNCIKCTYGTSPHIVLDAGAAAIDFTLYDLD-GAAWTLSEHL------ASQPVCLIWGMHTCPAFEGLGT---ASPFDECAYWDEAALVAAYGGSGGGVAFAHLVGPEPHPITPDTNFDSGVVKVNFWSTVAQARTYDARVAMARAVADKVHPNAALLPDLLPDAPYGDGDAAAAAQPVWCSYAHGARTAVLIGTDGVVRLAQTWFHAGDMAAAIEALL 234
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17671.1 vs. uniprot
Match: D8LC80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC80_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 3.900e-59
Identity = 99/219 (45.21%), Postives = 138/219 (63.01%), Query Frame = 1 
Query:  142 RSNFDRQRSIMGVFGQSPKLLLETGSGAIDFTSHDYPAGERWNLREHLEGVGGDAGKPVVLIWGMFTCPAFQGMGD-QPPIPPWDKCGYRDEYDLVETYKDRVAFVHLYGPEPHPTTPATNFDHGVVVNSYWSTVHQPESYEQRLAMVDRVKDLMHPAQAIIPDYMPGNPYSELINPLWCSYGLGARPATAIAQDGTIFYQQEWLHTGDLADELDVFLE 795
            + NF +  S+  ++G SP L+ + GS A+DFT HD   G RWNL E L    G+ GKPVVLI+GM+TCPA+QG+   +     W    Y DE+ LVE Y D+  FVH+YGPEPHP  P  NFD G    ++WS   QP  Y+ R+    +++ + HP + ++PDY+ GNPYS L  P+WC+Y  GARP+  ++  G++FYQQEWL T  L + +D + E
Sbjct:   17 QGNFHKGNSVRDIYGTSPHLVRDLGSPAVDFTLHDLD-GNRWNLGEVL--AAGE-GKPVVLIFGMWTCPAYQGLDVIEGSGNTWS---YWDEHTLVEQYGDKAIFVHIYGPEPHPKPPDLNFDAGTFSPNFWSVHRQPVIYDVRVEKAKKIRSITHPDEVVLPDYLTGNPYSSLNQPVWCTYANGARPSVMVSSSGSVFYQQEWLSTEGLGNAIDGYWE 228
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17671.1 vs. uniprot
Match: A0A7S2RV85_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RV85_9STRA)

HSP 1 Score: 191 bits (485), Expect = 4.480e-52
Identity = 100/241 (41.49%), Postives = 135/241 (56.02%), Query Frame = 1 
Query:   85 AAVNLRPESELTSNCFDFPRSNFDRQRSIMGVF--GQSPKLLLETGSGAIDFTSHDYPAGERWNLREHLEGVGGDAGKPVVLIWGMFTCPAFQGMGDQPPIPPWDKCGYRDEYDLVETYKDRVAFVHLYGPEPHPTTPATNFDHGVVVNSYWSTVHQPESYEQRLAMVDRVKDLMHPAQAIIPDYMPGNPYSEL---INPLWCSYGLGARPATAIAQDGTIFYQQEWLHTGDLADELDVFL 792
            A   L P S+L+S CF  P   F  Q +I  V   G++  +    G  A+DFT +D  AG    L   LE       KPV LIWGM+TCPAFQG+       P+D+    +E+D+VE YKD V F+HL GPEPHP  P  NFD G V    WSTV QP +Y++RL + ++V + +HP   ++ D  PGN Y+      NP+WC+ GL +R A  + QDGTI + Q W    DL+  +D  +
Sbjct:   23 ALAELDPASQLSSGCFGLPEKGFGLQSNIAQVDADGEAVWVSRAAGDSAVDFTLYDL-AGNEVTLSTLLED------KPVALIWGMWTCPAFQGLRSD---YPFDQNSRWEEWDVVEKYKDVVTFLHLVGPEPHPLAPDQNFDKGYVWMESWSTVRQPTNYDERLVLANKVAEYVHPDATVLADLYPGNSYAAADVSSNPVWCTMGLHSRSALLVDQDGTITFSQSWFRKDDLSAAIDALV 253
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17671.1 vs. uniprot
Match: A0A7S3K7C6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K7C6_9STRA)

HSP 1 Score: 188 bits (477), Expect = 5.850e-51
Identity = 96/239 (40.17%), Postives = 136/239 (56.90%), Query Frame = 1 
Query:  115 LTSNCFDFPRSNFDRQRSIMGVFGQSPKLLLETG---SGAIDFTSHDYPAGERWNLREHLEGVGGD-AGKPVVLIWGMFTCPAFQGMGDQPPIPPWDKCGYRDEYDLVETYKDR-VAFVHLYGPEPHPTTPATNFDHGVVVNSYWSTVHQPESYEQRLAMVDRVKDLMHPAQAIIPDYMPGNPYSELIN-------PLWCSYGLGARPATAIAQDGTIFYQQEWLHTGDLADELDVFLE 795
            + ++CFDFP+ +F     +   +G SP + +  G   S  +   +    +G  W      + +G + +GK  VLIWGM+TCPAFQG+G     PP+D+C YRDEYDLVETY ++ V F+HL GPEPHP TP  NFD G  + +YWST+ QP++++ RL +  R   L+HP    + D +   P             P WC+ GLGAR A  I Q GT+ + Q+W    DLA+ LD  L+
Sbjct:   21 IEADCFDFPKRSFSTTNCVKCTYGASPHIPVSVGDNISPQLQALTLSTASGSSW------KSLGTETSGKISVLIWGMWTCPAFQGLGTG-GSPPFDECSYRDEYDLVETYANKGVRFIHLIGPEPHPITPDVNFDSGKQLMNYWSTIAQPKTWDDRLQVAQRTAALIHPRSLTLVDPLADAPTQHKEGTEGFKNQPTWCTLGLGARTAILIDQHGTVQFTQDWFRKSDLANALDTLLK 252
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BLAST of mRNA_E-siliculosus-1a_M_contig97.17671.1 vs. uniprot
Match: D7FZ87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ87_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 1.100e-49
Identity = 88/106 (83.02%), Postives = 91/106 (85.85%), Query Frame = 1 
Query:  613 QAIIPDYMPGNPYSELINPLWCSYGLGARPATAIAQDGTIFYQQEWLHTGDLADELDVFLEGGGDPNAVT------------RDQHGSLGSASRSSVLPAQGLKRT 894
            QA+IPDYMPGNPYSELINPLWCSYGLGARPATAIAQDGTIFYQQEWLHTGDLADELDVFLEGGGDP+A              + QHGSLGSASRSSVLPAQGLKRT
Sbjct:    3 QALIPDYMPGNPYSELINPLWCSYGLGARPATAIAQDGTIFYQQEWLHTGDLADELDVFLEGGGDPDAAXXXXXXXXXXXXXQHQHGSLGSASRSSVLPAQGLKRT 108
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig97.17671.1 vs. uniprot
Match: A0A7S2C362_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C362_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.140e-31
Identity = 84/245 (34.29%), Postives = 116/245 (47.35%), Query Frame = 1 
Query:   88 AVNLRPESELTSNCFDFPRSNFDRQRSIMGVFGQSPKLLLETGSGAIDFTSHDYPAGERWNLREHLEGVGGDAGKPVVLIWGMFTCPAFQGMGDQPPIPPWDKCGYRDEYD---LVETYKDRVAFVHLYGPEPHPTTPATNFDHGVVVNSYWSTVHQPESYEQRLAMVDRVKDLMHPAQAIIPDYMPGNPYSEL-------INPLWCSYGLGARPATAIAQDGTIFYQQEWLHTGDLADELDVFL 792
            A  L+  S L   CF+FP S+FD   SI   +   P  L+  G  AIDF          + LR+ +        KPVV+++GM TCPAFQG+  +       K  +  +YD   LV+ Y     FV+LY  EPHP  P  NFD G  V   WST  QP +Y  R      + + +H    ++ D +      EL        NP+WC+YG G+R A  I QDG ++  Q W H   +A  ++  L
Sbjct:   49 AERLQNTSNLIGKCFNFPSSDFDYDNSINAYYPNDPTPLVARGGFAIDFALPSLDDNVYY-LRDLIRT------KPVVMVYGMLTCPAFQGLYLED-----HKESHFSKYDQWALVDKYHKDFHFVNLYSVEPHPMAPDKNFDTGGHVEYAWSTFRQPRTYRDRGYFAQNLAEELHEKSILLVDNLGNEKLPELKENNIPEYNPVWCTYGPGSRMAFLIGQDGKLYNVQGWFHATTMAGAMEEHL 281
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5L0M4_9PHAE2.030e-18185.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKN7_9PHAE2.150e-8555.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCJ3_ECTSI4.930e-8555.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSG9_9PHAE5.440e-6745.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z1L4_9STRA6.860e-6446.31Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D8LC80_ECTSI3.900e-5945.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2RV85_9STRA4.480e-5241.49Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3K7C6_9STRA5.850e-5140.17Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
D7FZ87_ECTSI1.100e-4983.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2C362_9STRA1.140e-3134.29Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig97contigE-siliculosus-1a_M_contig97:525218..532140 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size897
Model size2281
Exons5
Ec32 orthologEc-06_008920.1
Ec32 ortholog descriptionhypothetical protein
Hectar predicted targeting categorysignal peptide
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig97.17671.1prot_E-siliculosus-1a_M_contig97.17671.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig97 525218..530756 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936553.4808218-CDS-E-siliculosus-1a_M_contig97:525217..5253811622936553.4808218-CDS-E-siliculosus-1a_M_contig97:525217..525381Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 525218..525381 +
1696251128.0882425-CDS-E-siliculosus-1a_M_contig97:525217..5253811696251128.0882425-CDS-E-siliculosus-1a_M_contig97:525217..525381Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 525218..525381 +
1622936553.5011046-CDS-E-siliculosus-1a_M_contig97:526326..5265851622936553.5011046-CDS-E-siliculosus-1a_M_contig97:526326..526585Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 526327..526585 +
1696251128.098791-CDS-E-siliculosus-1a_M_contig97:526326..5265851696251128.098791-CDS-E-siliculosus-1a_M_contig97:526326..526585Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 526327..526585 +
1622936553.5234385-CDS-E-siliculosus-1a_M_contig97:528971..5291631622936553.5234385-CDS-E-siliculosus-1a_M_contig97:528971..529163Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 528972..529163 +
1696251128.1099293-CDS-E-siliculosus-1a_M_contig97:528971..5291631696251128.1099293-CDS-E-siliculosus-1a_M_contig97:528971..529163Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 528972..529163 +
1622936553.5429661-CDS-E-siliculosus-1a_M_contig97:529512..5295501622936553.5429661-CDS-E-siliculosus-1a_M_contig97:529512..529550Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 529513..529550 +
1696251128.1202304-CDS-E-siliculosus-1a_M_contig97:529512..5295501696251128.1202304-CDS-E-siliculosus-1a_M_contig97:529512..529550Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 529513..529550 +
1622936553.562145-CDS-E-siliculosus-1a_M_contig97:530512..5307561622936553.562145-CDS-E-siliculosus-1a_M_contig97:530512..530756Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 530513..530756 +
1696251128.13101-CDS-E-siliculosus-1a_M_contig97:530512..5307561696251128.13101-CDS-E-siliculosus-1a_M_contig97:530512..530756Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 530513..530756 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936553.579859-UTR-E-siliculosus-1a_M_contig97:530756..5321401622936553.579859-UTR-E-siliculosus-1a_M_contig97:530756..532140Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 530757..532140 +
1696251128.150487-UTR-E-siliculosus-1a_M_contig97:530756..5321401696251128.150487-UTR-E-siliculosus-1a_M_contig97:530756..532140Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 530757..532140 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig97.17671.1

>prot_E-siliculosus-1a_M_contig97.17671.1 ID=prot_E-siliculosus-1a_M_contig97.17671.1|Name=mRNA_E-siliculosus-1a_M_contig97.17671.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=299bp
MAMRALVLASTVTAAAAAAAAAAADASSAAVNLRPESELTSNCFDFPRSN
FDRQRSIMGVFGQSPKLLLETGSGAIDFTSHDYPAGERWNLREHLEGVGG
DAGKPVVLIWGMFTCPAFQGMGDQPPIPPWDKCGYRDEYDLVETYKDRVA
FVHLYGPEPHPTTPATNFDHGVVVNSYWSTVHQPESYEQRLAMVDRVKDL
MHPAQAIIPDYMPGNPYSELINPLWCSYGLGARPATAIAQDGTIFYQQEW
LHTGDLADELDVFLEGGGDPNAVTRDQHGSLGSASRSSVLPAQGLKRT*
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mRNA from alignment at E-siliculosus-1a_M_contig97:525218..532140+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig97.17671.1 ID=mRNA_E-siliculosus-1a_M_contig97.17671.1|Name=mRNA_E-siliculosus-1a_M_contig97.17671.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6923bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:525218..532140+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCCATGAGGGCTCTGGTGCTAGCCTCTACCGTTACTGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCCGACGCATCATCAGCGGCGGTCAACTTGA
GGCCGGAGTCTGAGCTAACGAGCAACTGCTTCGATTTCCCCCGCAGCAAC
TTCGACAGGCAAAGGTGGGCGGGGAGCTATAATAGCTGTGGGCGAAGACC
CCTCGGACGGTGATACGTGTCGTGTCGTGTCGTGCCCGGTCTGCCATGGA
TGCACATTGAGCGTACATGGCACATTTTTTAGGTTTACAAGGGTGTGTTC
GGTAGGGTACGGTTACGCTGTGGGTAGGGTATGGAGGGCTACCGAGGCGT
ACCGAGATTTTCGGTAGGTATGGAAGCCTGCACCGAAGGGTACCGAGACG
CTCGGTATGGTATGATACCGGTGGAAATACCGGCGGTACACCTCGGTACG
TACCCGACCGAACACACCCTTGCAGTTGATTTTTATTTTTGCGAGTAACC
AAAGTTGGTTTTGATCAGAAAAACCCTCACGGGGGCTGAATGGGTGCGTT
ATTCCTAACGTTTTAGTGGCGAGAAAGCAAGAAGTGTACACACGCAAGTT
TGGCACCCTGCATCGCGTTAGAAGAGGCCGAGGTTTACATGTAGAGCCTT
CTTGTTTCCTCCTCTAGGCCGAGGCGAGAAAAAGGTGACGGCTTCGCCCC
TATATTACATGCTAAGTACATACAGTGAGTGGGAGAGATGGCACCCCCGT
GTTACGCGTTTTTGTACAGCGTATTTCTCCACAACCATGGGGGCTACTGT
ACCACTGCCGAAAAGGGAAGTTTTGGAAACATCTCGTCGAGAGCTCTCCT
GAGAGGTATCGGTTGGTGTTCGCACCCTCTTAGTTGTGGAGAAATACGCC
ACAAAAAAACGCCAACACGGGGATGCCATCTCTCCGACTCTTACGGTACG
GTACAGCAGCAGTGAGGGCGGGGTTATTAAATTGTCACCCGCGGTAACTC
GGAACATTAGTCGTCGTATAAACAGGCCCTTTGCAAGCGAGAGCATTGTT
CAAAAAGCAAACACATTCCACTGCTGCTGCTGCTGCATGCATACAACAAC
ACGTGCCAGATCCATAATGGGGGTTTTCGGGCAGTCCCCCAAGCTTCTCC
TCGAGACCGGGAGCGGCGCGATCGACTTCACCTCGCACGACTACCCCGCG
GGGGAGCGGTGGAATCTGCGCGAGCACCTGGAGGGGGTCGGCGGCGACGC
GGGGAAGCCGGTAGTGCTGATCTGGGGGATGTTTACGTGCCCGGCATTTC
AGGGGATGGGCGACCAGCCCCCGATCCCTCCATGGGACAAGTGCGGGTAC
AGAGACGAGTACGATTTGGTGAGTGTAGCGAGAGTACTGCTGTAACGAGG
GAGGGGGGGGGGGCGTTGTTTGGACCCTTGGGCCGGCGAGGAACCGTGTG
ATGAAAGATACGTCCTCTTCTCAAAACAAAGAGTTAAAAAACACACACAC
AGCAGCAGCATTGAGATTATAATTTACTGTTTTTATTTATTGTCTTCTTG
CCGCGGGTTCTTGTACGATGCCAACCAACCGTGCGGGGAGTGTTCTCTAT
GCTCTATGGCGAGTCTGCAGGCACGGGTTTACGCGGGGGCACACCGCTTG
TCCAGATGCTGCCGAGAGGGTTCGAAGCTTTTGAGTTACCCGCCACCATA
GCAGTTACCCGCTACCACGCTTGGTTGCTGTTGACGCCCATTGGGCGACG
CTCTCCTCTCCCCGTTTCATTTTTTCGTGGTACGGTATTCTACGGTTGTT
GTCGCGGAATGGGTCGGTCAATCAGCTCCTGGCCTCCGCTGTCTTTCGAG
TTCGACGAATTTATGCGGGGCCTACACGGGGCGAAACCCCCGCAAACACG
CCGCCCCGCACCAAGAAGAGCACCGACCCCTGTGCGTAAGATTCAGACGT
CGATGCTGTCTCGGTACGGCCGTCCGTACAAAGCCGAACCCGCCCTCGGG
CGCCTCGCCGCAGAACGAACGTACAGCGCGCGCTGCCGCGGGTGCCTCTC
CCCATCCCCCCCAACCCGCAGTAGCAGCAGTAGCAGCAGTAGCAGCAGCA
GCAGCAGCAGCAGCAGTAGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGC
AGTAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAATAAATGCGGGCG
CTGAAGATCTGCCCCATCTCGCCATCGCATGAGCAACCCCTTTCTCCAAG
ACGACGGGGATGGCGGACCCGGCGGCTCCGGCTCGGTTCCCCCGGAAGAA
ATCGTCTATCGCCCCTGGCGAATATTCCGCCAGCGGTTGCTGGGGGAAGG
CGATTGGTTCGGCCGGAGCGTCTGCTGGAGCCTCCGCTCCCGCAGCGTCT
GTGGCCCGCCAAAGAAAGTTCCCATGGCACCTCCCACGGGACACAGTCCT
GCTTCGCCAGGTCAGGCGTTGGTGGCATGTCGAGTATGACAGTGGACAAG
CCACCAACACCTGACTTGGCGAAGCAGGACCTTCTCTTTTGGTAGCTGCC
CTGAAAATTTTCTTTTGGCGGGACGCAGATGCCGTGGGAGTGGAGGAGTC
TTCAGCAGCCGCTCCGGCAGAACCAATCGCCTTCCCCCAGCAACCGCGGT
GGAATCACCAGCGGCGATAGACGACTTCTTCGGGGGGGGAACCAAGTTTC
CCGCGCGAACCAAGGATAGACCTATCCTCCTACACGTGTGCACATTGCTC
TACCCGCTGTGTAAGCTGCTGCATGTGCCTGGTCGCTGTGTCGGGTTTCC
TGCCGAGAGCCCCATCCCTACAATGTGCACTTCTAGCTACTTTGCTGTTG
CCCGGTTTTGTGCTGCCGCATGTATCTGTTCGTCGTGTCGTCGAGTACAG
TTTGTCGGGTTTCCTGCGGAGCAGAGGCAGGTGTAGATCGGAGACCCCCC
TCCCACGAGAATTGGGGGTCTTGGGGGCCGACACGCACATGCTTTTCTGA
TTTTAACGTTTTGTCCGCGATGAACGCCGGGGTCACCCGGTATACCAGTT
ACAGGAAGGAGGGAGAGCCTTTCTTTCTCTCTGGCAACTCTTACGTAGAG
AGGTGCGGGAAGGGCTTGCAAGAGTCCGTTTACTAAATACCCTCGACAGT
CATGCTATAGTTTAGGTTTTACTTTCTTCAGATGGATGTTGCTGTTTCTC
AGTATGCGAAATACGTCCCCCCCAGGGTGGGCTAGGTGATCGACAACACA
AACAACCACATGCGAGAGGCAACGCGCGTGTATCGGTAAATCTAGGGAAG
CGGGCAGCCTGGGGTCACGAACGTCGCGGGTTGAAAGTCGCAAAGAGGCC
CGAAGGCCCCAAGGCCCTAAAGGCCCTACATGTCAGTACCCCTTTGATGT
ATGCACAATACAATTCTTGCCCAAGCATGCCTAGGCTCTGCTGCGAGACT
CGTGTTTTGCAAAGAAAGCGATACAGCGAACCATGCCCCAGCTTCTTGAC
GGCAGGAGGCCGAAGATATGAAACATTGGACCCTGCATTTCGCGGCGCGT
TTTTTCTTGCCTTCTTTTTCATCAATCCAACGCACGAAAGTTACAGGAAA
GACACCTATTCACACACACCCACACCCACTCCCCGGCATTACAGGGATGC
AAGGTCTATATGTCCTCCCGATTACGGCATGCTTTGACATTGTATCCCCC
CCCCCCGGCCGCGGTCGCCCCCACGAACCGTTCCGCGAACCGTTCCGCGA
ACAGGTGGAGACGTACAAGGACCGCGTGGCCTTCGTGCACTTGTACGGGC
CAGAGCCGCATCCGACCACACCGGCCACCAATTTCGACCACGGCGTGGTG
GTGAACAGCTACTGGAGCACGGTGCATCAGCCCGAGTCCTACGAGCAGCG
GTTGGCCATGGTGGACAGGGTCAAGGACCTGATGCACCCGGCACAGGTGT
GTATTCTGTGTGTGCGTGTGTGTCTCTTTGTTCGTTGTTATCGACCGCCG
CGCTAGCCGTCTGACCAATGAAATGACGGCTGTGCCAATGGGTGAAACCA
AATTCCCTGGAAGTGTGTGTATCTGTTGGCTCGCATACGTGCTCGGGAAG
GAACGGATCTAGATGTACCTAGGAATTGGCGATAACACCCAGCTCTTGCT
CCAAGAGCAGCAACGTCCGAGCCATGAGCGATGCCTATCGGAGACGATTT
TTCTCACATACCATGTAACCCTACAACACTACAACACTACGCGTACCCCG
TTCGCCTCGACACGCCCCGCCCCCCCCCCCCCGTATATGCCACAGGCGAT
CATTCCGGACTACATGCCGGGGAACCCCTACAGGTGTGCATACCAAAAGG
ACTGACTTGTGACCTGCTGTGGTGTTTGACTTGTGATGGGAGCTTTCTCG
CTGTTCTGTGGTGTTTGACTTGTGACGGAGCCTTCTCGCTGTTTTTTTTA
TTATTATTTCGGGCACCATCCCGTTCTGTCAGAGAGGCGCCCCTCGCAGT
TTCTGCTCTATTCAGGTATCTCCTCTCCGGTGCCCTGCTGTGCCTCTCTG
TTATGCGACAGAATAGTTGAGAGTCGTGTGTACGGGGGGGGGGCTTGTGC
ATCCGTTTGTTCTCTTGCGAGCACCAACACCTACACTTGCCAGCCGGCTG
ATGATTAAAAATGGCACGAGTGCGAGCGGAAAATAAAAACTCCCCCGCGC
GGGAGCGAGTGTGTGGTGTGTGCACGTGTGCATGACAAATAGTCGGCCGT
ACGAGGAACATTTTGAGCGCTACAGACTGGCCAACGTCGTGCTACAATTA
CTTGTACCGCACTACAGCTGTTTTTCCACGTTGTGCAAGGAGTCCTTCTG
CTGCAGCAGCGAAAAACGTTACGCGTCGTTTGTGTGCTCCTTCCCTTCCC
GGCCGGCTCCTCAGCCCGTTTTCCTCTACCCCCCCCCCCAACCGGTCGTC
ATGCCACCCACCCCTCCAGCAATATTTTCATTCGCCGGCCCCCCCTTTTT
TGTTTCACCCCCTCCTCGGGTACGCACACATCATCATCATCATCATTGTC
ATCATCGTCATCCGATGTGCTTTCATTCTCACTGCTGTTGTTGTTGCCGT
CTGTCTGCACCGCAGCGGCTTGATCAATCCGCTCTGGTACTCCTCGTGGC
CTCTCACGACATGCTGTTGTTGCTGCCATCTGCACCGCTGCAAGCGACTT
GATCAAATCCGCTCTGGTACTCCTACGGCCTCCTGATGCGCTCCCACGTT
CACTACTGCTGTCGTTGTTTTGTGCCGCCGCCTGCACCGCCGCAGCGAAC
TGATCAACCCGCTCTGGTGCTCCTACGGTCTCGGGGCGAGGCCGGCTACG
GCGATCGCCCAGGACGGCACGATATTCTACCAGCAGGAGTGGCTGCACAC
GGGTGACCTGGCGGACGAGCTTGACGTGTTCCTGGAGGGCGGGGGCGACC
CCAATGCCGTGACGCGAGATCAACACGGCTCGTTGGGTTCTGCGAGTCGA
TCTTCGGTTCTTCCTGCCCAGGGGTTGAAAAGGACGTGACGCGCCACCAC
CGTGGTTTGTCGAGAAAGAGATCAGTAGTTTCACGTGAACGTTTTTTTTT
TCTCGACTTGTTGCTGTTGTGTCGCTTGATCCTCTTGTTTGTGGACTTTT
TTCACGGCCACCACATGATCAAATATGTTTCCTGCCCTTGAAAGTGTTTA
GGTAGGAGTCGACCGGAAACGGCCCGGGTTAGGGAATGCAGTTGGACCGA
CTGCCGCGTTGTCGTGTGCGGTAGGGGCACAGCAACGAGGCCGGACTCTT
CCGCTCTTTTTTTTTTTTTTTTGTGTCGTGTTCGTGTCCACAGCTGCCGC
TCGGTGTGGCGGGAGTAGCATAGCAATACGCCCGCGCGGGTGATGGGTAA
TCTTGAGAGGTACGCAGCCCCCCTGGGTGTTGAGGAGATCGGTCCCCCGG
CAGGACGGTGGAAAAAAAAAGACGACGGCACGCTGCTACATAGCCGTGTA
ACTTGACGGTTTTTGCTGATTTTCTTTTTGAAGCGGAAGCTGCCGTCGGA
CGTAAAATCAAACAAGTGTTAATGATGCTAACGACGCTAAGGCAGCGGCA
TACATCGAGGAAGAAGAGCGAACGGCGGTAGTGGTTCTTGTGAGCGCCGC
CGGTGGGAATAACGTGGGATGGATGGCGGCAAATCTGGACTGTTCGAACA
TTTTTGCCTTTCTTTTGTGTGAAGTGCTGCTGTAAGAGTTAATGTATCCA
TGTATCTCCCTTCGCGAAATGAAAGTCCAGGATGAATTCGTGATGGAAAT
CATAGCGTTTGCCTATACTCTGCTCTTCTCTTGTGAACCTCGCGCGACAT
GCTAACAGAGGTAGATAGCCCTGCCTTGGTCAGTACCATTGGCATGGAGG
CGTGCGGAGTAGGGCGGGGGGGGGGCGTGCAAGATGTTTTTGTTTCGCGT
CGTGTCTCGCGCGAGGAGTTTCTGCTGTAGTTTGGATGTGGTGCCCGACG
CCAGAAAGGGCTCGCACCCCGAGCTTCGTCCCTCGTCCTGATTGTCTCCC
AGCTAAGACAAGCCTGCAAGCGCTTGCGGTTAAGGTGGTGGCGTGGTGGA
GTCTGCCGTTGTCTTGTGTATAGTCTATCGTTGTGTTGATTTGTGTGCTT
GTTGCGATCTCGTCAGCTAGGTAGGCGCTGAGAAGCCTTGTACGGGGAAG
AGGGGGTGACGAGTTGCCCGCAGTTTTTTGTAGAACCCTGGTATTTGAGT
TTTAAGCCTATTCGTGCATGTAGCAGGTGCTACCGAACATTTCTTGATGG
ACACGACACCGACACCTAACAGCTCATCGATTTATTTTTCTTTTGCGCCA
CACCACTTGGGGCTGGGAATGAAAGGGAAACGTGCTGTGGCAACAAGAGA
AGAGATCAAAGTAAGTTTGTCAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:525218..532140+

>mRNA_E-siliculosus-1a_M_contig97.17671.1 ID=mRNA_E-siliculosus-1a_M_contig97.17671.1|Name=mRNA_E-siliculosus-1a_M_contig97.17671.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1794bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:525218..532140+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCCATGAGGGCTCTGGTGCTAGCCTCTACCGTTACTGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCCGACGCATCATCAGCGGCGGTCAACTTGA
GGCCGGAGTCTGAGCTAACGAGCAACTGCTTCGATTTCCCCCGCAGCAAC
TTCGACAGGCAAAGATGGCCATGAGGGCTCTGGTGCTAGCCTCTACCGTT
ACTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGACGCATCATCAGC
GGCGGTCAACTTGAGGCCGGAGTCTGAGCTAACGAGCAACTGCTTCGATT
TCCCCCGCAGCAACTTCGACAGGCAAAGATCCATAATGGGGGTTTTCGGG
CAGTCCCCCAAGCTTCTCCTCGAGACCGGGAGCGGCGCGATCGACTTCAC
CTCGCACGACTACCCCGCGGGGGAGCGGTGGAATCTGCGCGAGCACCTGG
AGGGGGTCGGCGGCGACGCGGGGAAGCCGGTAGTGCTGATCTGGGGGATG
TTTACGTGCCCGGCATTTCAGGGGATGGGCGACCAGCCCCCGATCCCTCC
ATGGGACAAGTGCGGGTACAGAGACGAGTACGATTTGATCCATAATGGGG
GTTTTCGGGCAGTCCCCCAAGCTTCTCCTCGAGACCGGGAGCGGCGCGAT
CGACTTCACCTCGCACGACTACCCCGCGGGGGAGCGGTGGAATCTGCGCG
AGCACCTGGAGGGGGTCGGCGGCGACGCGGGGAAGCCGGTAGTGCTGATC
TGGGGGATGTTTACGTGCCCGGCATTTCAGGGGATGGGCGACCAGCCCCC
GATCCCTCCATGGGACAAGTGCGGGTACAGAGACGAGTACGATTTGGTGG
AGACGTACAAGGACCGCGTGGCCTTCGTGCACTTGTACGGGCCAGAGCCG
CATCCGACCACACCGGCCACCAATTTCGACCACGGCGTGGTGGTGAACAG
CTACTGGAGCACGGTGCATCAGCCCGAGTCCTACGAGCAGCGGTTGGCCA
TGGTGGACAGGGTCAAGGACCTGATGCACCCGGCACAGGTGGAGACGTAC
AAGGACCGCGTGGCCTTCGTGCACTTGTACGGGCCAGAGCCGCATCCGAC
CACACCGGCCACCAATTTCGACCACGGCGTGGTGGTGAACAGCTACTGGA
GCACGGTGCATCAGCCCGAGTCCTACGAGCAGCGGTTGGCCATGGTGGAC
AGGGTCAAGGACCTGATGCACCCGGCACAGGCGATCATTCCGGACTACAT
GCCGGGGAACCCCTACAGGCGATCATTCCGGACTACATGCCGGGGAACCC
CTACAGCGAACTGATCAACCCGCTCTGGTGCTCCTACGGTCTCGGGGCGA
GGCCGGCTACGGCGATCGCCCAGGACGGCACGATATTCTACCAGCAGGAG
TGGCTGCACACGGGTGACCTGGCGGACGAGCTTGACGTGTTCCTGGAGGG
CGGGGGCGACCCCAATGCCGTGACGCGAGATCAACACGGCTCGTTGGGTT
CTGCGAGTCGATCTTCGGTTCTTCCTGCCCAGGGGTTGAAAAGGACGTGA
CGAACTGATCAACCCGCTCTGGTGCTCCTACGGTCTCGGGGCGAGGCCGG
CTACGGCGATCGCCCAGGACGGCACGATATTCTACCAGCAGGAGTGGCTG
CACACGGGTGACCTGGCGGACGAGCTTGACGTGTTCCTGGAGGGCGGGGG
CGACCCCAATGCCGTGACGCGAGATCAACACGGCTCGTTGGGTTCTGCGA
GTCGATCTTCGGTTCTTCCTGCCCAGGGGTTGAAAAGGACGTGA
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