mRNA_E-siliculosus-1a_M_contig97.17654.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17654.1 vs. uniprot
Match: D7FTQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ2_ECTSI) HSP 1 Score: 693 bits (1788), Expect = 1.770e-237 Identity = 396/416 (95.19%), Postives = 403/416 (96.88%), Query Frame = 1 Query: 703 MLHHQHQQQQSEVVDRGLRELSAAIVRVETKLSLDSSEASQLREALRMLRSEKEAYVREKASTAARMEAVSREYDILNRRVAVAEAELGRRSGRLRKAEVDREKTQAALSVRAQQLATGFGMEKERFSREMQSAEAQQGTGGPVAVAAEKHKIDRGYRDRLRVLSDGLASTQLQLATLKSNRSKLAALEVEARKDLATQVARLEAQLKRAGEGIEKEKADMEKLLLNLSNALSGVDVQLTQSAGMTPSRETSRALRRAKEDFRLNQRRVKLLLEKQRQRYDATSSVVEEEAQRLKSKTNELVSLRAELIEREGKEKDLKSNVAVLGKRVSSLDHDLWKTRSALAHEQRLRHEAQAALVKSEEEREKQTKRLWSELRATRDSATSARQVYEGTVEQREDWRKAIEEEKRAKIEAAER 1950
MLHHQHQQQQSE VDRGLRELSAAIVRVETKLSLDSSEASQLREALRMLRSEKEAYVREK STAARMEAVSREYDILNRRVAVAEAELGRRSGRLRKAEVDREKTQA LSVRAQQLATGFGMEKE+FSREMQSAEAQQGTGGP AVAAEKHKIDRGYR+RLRVLSDGLASTQLQLATLKSNRSKLAALEVEARKDL TQVARLEAQLKRAG+GIEKEK DMEKLLLNLSNALSGVD QLTQSAGMTPSRETSRALRRAKEDFRLNQRRVKL LEKQRQRYDATSSVVEEEAQRLKSKTNELVSLRAE+IEREGKEKDLKSNVAVLGKRVSSLDHDLWK RSALAHEQRLRHEAQAALVKSEEE EKQTK LWSELRATRD+ATS RQVYEGTV+QR+DWRKAIEE KRAKIEAAER
Sbjct: 1 MLHHQHQQQQSEAVDRGLRELSAAIVRVETKLSLDSSEASQLREALRMLRSEKEAYVREKTSTAARMEAVSREYDILNRRVAVAEAELGRRSGRLRKAEVDREKTQATLSVRAQQLATGFGMEKEKFSREMQSAEAQQGTGGPAAVAAEKHKIDRGYRERLRVLSDGLASTQLQLATLKSNRSKLAALEVEARKDLTTQVARLEAQLKRAGDGIEKEKTDMEKLLLNLSNALSGVDFQLTQSAGMTPSRETSRALRRAKEDFRLNQRRVKLHLEKQRQRYDATSSVVEEEAQRLKSKTNELVSLRAEVIEREGKEKDLKSNVAVLGKRVSSLDHDLWKNRSALAHEQRLRHEAQAALVKSEEEWEKQTKSLWSELRATRDAATSTRQVYEGTVKQRDDWRKAIEEGKRAKIEAAER 416 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17654.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig97.17654.1 >prot_E-siliculosus-1a_M_contig97.17654.1 ID=prot_E-siliculosus-1a_M_contig97.17654.1|Name=mRNA_E-siliculosus-1a_M_contig97.17654.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1233bp MARSCRPNVGIGVALVVVFQFFGAETSAFSTAGCLRSTDAHATAARLPSLback to top mRNA from alignment at E-siliculosus-1a_M_contig97:272679..282398- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig97.17654.1 ID=mRNA_E-siliculosus-1a_M_contig97.17654.1|Name=mRNA_E-siliculosus-1a_M_contig97.17654.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=9720bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:272679..282398- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:272679..282398- >mRNA_E-siliculosus-1a_M_contig97.17654.1 ID=mRNA_E-siliculosus-1a_M_contig97.17654.1|Name=mRNA_E-siliculosus-1a_M_contig97.17654.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=7398bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:272679..282398- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |