mRNA_E-siliculosus-1a_M_contig97.17633.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig97.17633.1
Unique NamemRNA_E-siliculosus-1a_M_contig97.17633.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17633.1 vs. uniprot
Match: A0A6H5JJQ0_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ0_9PHAE)

HSP 1 Score: 770 bits (1988), Expect = 4.570e-271
Identity = 389/456 (85.31%), Postives = 405/456 (88.82%), Query Frame = 3
Query:  195 MSDEEAWEPLTMVDYTMLGFVGTVQAFALGVCVHLLSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRTEGDILAKCPLERFLAWSALCTHIFAFFIRVYRMWRILVKHDDSMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLW----------------------------FVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTDVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVDAAELEQRENRLLRAGGFLPPGSPPSPC 1478
            MSDEE WEPLTMVDY MLGFVGTVQAFALGVCVHLLSWR+WPPYVTKNVDIVIVMTF GF WTI+ AL+NGL RR+EGDILAKC LER LAW ALCTH+FAFFIRVYRMWRILVKHD++MWPAKYQIMLLSSISL P LVALLVPGAYVFDETVN C TTSTSR V LAMN VGFYT+CY+W                            FVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLD QHV VRRVAIVYPALTTH VLWGSIGEPV+KKWT D+EYLWSFTKGFS++PSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILST VTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIV+A+ELEQRENRLLRAGGFLPP +PPS C
Sbjct:    1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLLSWRHWPPYVTKNVDIVIVMTFGGFGWTISVALDNGLFRRSEGDILAKCYLERLLAWPALCTHMFAFFIRVYRMWRILVKHDENMWPAKYQIMLLSSISLTPALVALLVPGAYVFDETVNLCTTTSTSRTVTLAMNAVGFYTICYIWWRQSYVHVPATGLMRAVCALVSLAAKTRFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDGQHVIVRRVAIVYPALTTHTVLWGSIGEPVLKKWTRDEEYLWSFTKGFSDLPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTHVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVEASELEQRENRLLRAGGFLPPDTPPSLC 456          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17633.1 vs. uniprot
Match: D7FTZ9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ9_ECTSI)

HSP 1 Score: 673 bits (1736), Expect = 2.240e-233
Identity = 330/430 (76.74%), Postives = 369/430 (85.81%), Query Frame = 3
Query:  195 MSDEEAWEPLTMVDYTMLGFVGTVQAFALGVCVHLLSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRTEGDILAKCPLERFLAWSALCTHIFAFFIRVYRMWRILVKHDDSMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDNQH-VYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTDVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVDAAELEQRENRLLRAGGFLPPGSPPSPCV 1481
            MSDEE WEPLTMVDY MLG VGT QA ALGVCVHL  WRNWPPYVTKNVDIVI+MTFAGFAWT A AL+ G + R++GD+LA+C LE+ L WS LC H+FAFFIRVY MWRI+V+HD+ +   K QI LLSSISLVPPL+ALLVPGAYVFDET+NSCNTTSTSR V L MN VGFYT+C+LWFVC RQLR VRKQFNEYE +KWTLSCL LL+ SY V V ++LDN+H V  RR+AIVYP LTTH +LWGSIGEP++KKW GD EYLWSFT+GFSEMPSPAQLKASLAEQLSVEQLR EFR Y+ TKVAQELV+FYLDSLDREEI  +F RQA TMRIVA+YIR+GAP+QVNIS  CREEI+ST+VTAYDIFDRAR EVL VME  F+ EFVETEGFRRI +A+ELEQRE RLLRAGGFLPP +PP PCV
Sbjct:    1 MSDEELWEPLTMVDYLMLGIVGTFQALALGVCVHLFLWRNWPPYVTKNVDIVIIMTFAGFAWTFANALDVGFVHRSKGDLLAECSLEKLLTWSTLCIHMFAFFIRVYLMWRIMVRHDEDVGSPKGQIFLLSSISLVPPLIALLVPGAYVFDETINSCNTTSTSRTVGLGMNAVGFYTICFLWFVCGRQLRRVRKQFNEYEAIKWTLSCLILLVLSYTVGVNIILDNKHHVLARRLAIVYPVLTTHTLLWGSIGEPLLKKWEGDREYLWSFTRGFSEMPSPAQLKASLAEQLSVEQLRDEFRGYMRTKVAQELVNFYLDSLDREEIHGFFGRQAATMRIVARYIRDGAPEQVNISEACREEIVSTNVTAYDIFDRARAEVLAVMEAEFKAEFVETEGFRRIANASELEQREKRLLRAGGFLPPSTPPGPCV 430          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17633.1 vs. uniprot
Match: D7FTZ7_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI)

HSP 1 Score: 616 bits (1588), Expect = 1.400e-210
Identity = 312/446 (69.96%), Postives = 343/446 (76.91%), Query Frame = 3
Query:  195 MSDEEAWEPLTMVDYTMLGFVGTVQAFALGVCVHLLSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRTEGDILAKCPLERFLAWSALCTHIFAFFIRVYRMWRILVKHDDSMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTDVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVDAAELEQRENRLLRAGGFLPPGSPPSPCV*RRPLPL-SRRGLLLDA 1529
            MSDEE WEPLT VDY MLG VG  QAFALGVC+HL+ WR WPPYVTKNVDIVI+MT AGFAWT A ALE G+I R+EGD LA C  E   +WS L  H+ +F +RVYRMWRIL+KHDD MWPAK                                        NVVLAMN +GFY +CYLWFVC RQLRWVRKQFNEYE MKWTLSCLTLLLFSYA VV +VL+NQHVYVRRVAIVYP LTT+ +LWGSIGEP+ +K  GD EYL+SFTKGFSEMPSPAQLKASLAEQLSV+QLR EFR+Y+ET VAQELVDFYLDSLDREEIK YF RQA TMRIV QYIREG+PDQVNISGECREEILSTDVTAYDIFDRAR EVL VMETNFQR+F+ETEGFRRIVDA+ELEQR+ RLLRA G L P +  +P     P  + S RG LLD+
Sbjct:    1 MSDEEPWEPLTFVDYVMLGMVGAFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTLAGFAWTFASALETGIIERSEGDFLANCYFEVIFSWSTLLAHMMSFAVRVYRMWRILIKHDDHMWPAK----------------------------------------NVVLAMNALGFYAICYLWFVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIVLNNQHVYVRRVAIVYPVLTTYTLLWGSIGEPIKRKLAGDTEYLYSFTKGFSEMPSPAQLKASLAEQLSVQQLRVEFRKYVETMVAQELVDFYLDSLDREEIKGYFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMETNFQRDFIETEGFRRIVDASELEQRQMRLLRAEGVLVPSASTTPVRLAAPPSIFSPRGRLLDS 406          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17633.1 vs. uniprot
Match: D7FTZ6_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ6_ECTSI)

HSP 1 Score: 607 bits (1566), Expect = 4.080e-208
Identity = 295/367 (80.38%), Postives = 325/367 (88.56%), Query Frame = 3
Query:  243 MLGFVGTVQAFALGVCVHLLSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRTEGDILAKCPLERFLAWSALCTHIFAFFIRVYRMWRILVKHDDSMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTDVTAYDIFDRARVEVLTVME 1343
            MLG VGT QAFALGVC+HL+ WR WPPYVTKNVDIVI+MT AGFAWT A AL++GLI R EGD LA C ++  L+WS L  HI +F +RVYRMWRIL+KHDDSMWPAKYQ+M++SSISL P L A+LVP  + FDETVNSCNTT+ SRNVVLAMN +GFY +CYLWFVCTRQLRWVRKQFNEYE MKWTLSCLTLLLFSYA VV ++L+NQHV VRRVAIVYP L+T+ +LWGS+GEPV+KK+TGD+ YLWSFTKGFSEMPSPAQLKASLAEQLSVEQLR EFRRYIETKVAQELVDFYLDSLDREEIK YF RQA TMRIV QYIREG+PDQVNISGECREEILSTDVTAYDIFDRAR EVL VME
Sbjct:    1 MLGMVGTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTLAGFAWTFASALQSGLIPRNEGDFLAICYIDTTLSWSTLAVHIMSFAVRVYRMWRILIKHDDSMWPAKYQVMVMSSISLGPLLAAVLVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYLICYLWFVCTRQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNQHVLVRRVAIVYPVLSTYTLLWGSVGEPVVKKFTGDEGYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRVEFRRYIETKVAQELVDFYLDSLDREEIKGYFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVME 367          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17633.1 vs. uniprot
Match: D7FTZ5_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ5_ECTSI)

HSP 1 Score: 527 bits (1358), Expect = 1.720e-175
Identity = 287/468 (61.32%), Postives = 328/468 (70.09%), Query Frame = 3
Query:  195 MSDEEAWEPLTMVDYTMLGFVGTVQAFALGVCVHLLSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRTEGDILAKCPLERFLAWSALCTHIFAFFIRVYRMWRILVKHDDSMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTDVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVDAAELEQRENRLLRAGGFLPPGSPPSPCV*RRPLPLSRRGLLLDARFMLACPRWTRAVGTQPPRGNRS 1598
            M D+E WEPL  VDY MLG V T QAFALGVC+HL+ WR WPPYVTKNVDIVI+MTFAGFAWT A A+ +GLI+R+E D LA C  E   A  A  T +F                       + Q++LLSS  L+P L+A+L P  + FDET NSC T++ +  VVL M+  GF  +  LW VC RQLRWVRKQFNEYE MKWTLSCLT+LLFSYA+VV ++LD  H YVRRVAI +              EP   K TG+ EYL+SFT+GFSEMPSPAQLKA+LA+QLSVEQLR EFRRYIE KVA ELVDFYLDSLDREEI EYFARQA TMRIV QYIREGAPDQVNISGECR+EILST VTAYDIFDRAR EVL VMETNFQ +FVETEGFRRIV+AAELEQR+ RLL+A GFL P +  SP       P S  G+L   R +    R   +    P R + S
Sbjct:    1 MPDKEPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWTFAAAVGHGLIQRSEDDFLANCYFESTDAVPACPTRLF-----------------------RVQVLLLSSTGLIPLLLAILDPDLFFFDETANSCGTSTGATRVVLGMDAFGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTILLFSYAIVVAIILDGHHCYVRRVAIAW--------------EPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYIEAKVAHELVDFYLDSLDREEIMEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIVNAAELEQRQIRLLQAEGFLLPNTGTSPTDTEVLSPSSPDGVLGPFRRLSLVGRMLFSSSVGPARTSLS 431          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17633.1 vs. uniprot
Match: A0A6H5KAT5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE)

HSP 1 Score: 539 bits (1389), Expect = 3.900e-173
Identity = 273/427 (63.93%), Postives = 326/427 (76.35%), Query Frame = 3
Query:  195 MSDEEAWEPLTMVDYTMLGFVGTVQAFALGVCVHLLSWRNWPPYVTKNVDIVIVMTFAGFAWTIAGALENGLIRRTEGDILAKCPLERFLAWSALCTHIFAFFIRVYRMWRILVKHDDSMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTDVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVDAAELEQRENRLLRAGGFLPPGSPPSP 1475
            M+++E WEPL+  D+ +LGFV T Q  AL VC HLL WR WPPYVTKNVD+VI+          A  L      R  GDILA C  ERFL+WS LC H  AFFIRVYRMWRIL+KHDD MW   +QI+ +SS+SL+P +    VP    FDE  N+C+TT+ S  VVL M+ +GF  +CYLWFVC RQL+WVRKQFNEYETMK TL  +T+ L SY V+VV +L +  V  RRV++ YP LTT+ +LWGSI EP M K  GDDEYLWS+TKGF+++PSPAQLKASLAEQLSV+QLR EFRRYI+TKVAQEL+DFYLDSLDREE+ ++F RQA TMRIV QYI+EGA DQVN+SG CRE+IL+TDVTA+DIFD AR EVL VMETNF+R+FV TEGFRRI++A++ EQRE RLLRAGG L P   PSP
Sbjct:    1 MAEDEVWEPLSTPDFWVLGFVATFQTVALLVCAHLLRWRKWPPYVTKNVDVVIIS---------AARLPTRQPGR-PGDILAACDFERFLSWSTLCVHTVAFFIRVYRMWRILIKHDDQMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEVANTCSTTTFSTIVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYETMKRTLLYMTITLASYGVIVVYLLADNLVLGRRVSVFYPLLTTYILLWGSIREPFMMKILGDDEYLWSYTKGFAQLPSPAQLKASLAEQLSVDQLRDEFRRYIKTKVAQELIDFYLDSLDREEVADFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLLPLGTPSP 417          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17633.1 vs. uniprot
Match: A0A6H5K0N5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0N5_9PHAE)

HSP 1 Score: 509 bits (1311), Expect = 1.040e-169
Identity = 266/355 (74.93%), Postives = 292/355 (82.25%), Query Frame = 3
Query:  519 MWRILVKHDDSMWPAKYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSEMPSPAQ-----------------LKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTDVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVDAAELEQRENRLLRAGGFLPPGSPPSPCV*RRPLPL-SRRGLLLDA 1529
            MWRIL+KHDD MWPAKYQ++L+SSISL P L A+LVP  + FDETVNSCNTT+ SRNVVLAMN +GFY +CYLWFVC RQLRWVRKQFNEYE MKWTLSCLTLLLFSYA VV ++L+N+HVYVRRVAIVYP LTT+ +LWGSIGEP+ +K  GD EYL SFTKGFSEMPSPAQ                 LKASLAEQLSV+QLR EFRRY+ET VAQELVDFYLDSLDREEIK YFARQA TMRIV QYIREG PDQVNISGECREEILSTDVTAYDIFDRAR EVL VMETNFQR+FVETEGFRRIVDA+ELEQRE RLLRA G L P +  +P     P  + S RG L+D+
Sbjct:    1 MWRILIKHDDHMWPAKYQVLLMSSISLGPLLAAILVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYVICYLWFVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNRHVYVRRVAIVYPVLTTYTLLWGSIGEPIKRKLGGDTEYLNSFTKGFSEMPSPAQVRKLPPAARDSSNDLVLLKASLAEQLSVQQLRVEFRRYVETMVAQELVDFYLDSLDREEIKGYFARQAATMRIVEQYIREGGPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMETNFQRDFVETEGFRRIVDASELEQREMRLLRAEGVLVPSASTTPVRLAAPRSIFSPRGRLVDS 355          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17633.1 vs. uniprot
Match: A0A6H5K025_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K025_9PHAE)

HSP 1 Score: 504 bits (1298), Expect = 8.910e-168
Identity = 270/408 (66.18%), Postives = 275/408 (67.40%), Query Frame = 3
Query:  195 MSDEEAWEPLTMVDYTMLGFVGTVQAFALGVCVHLLSWRNWPPYVTKNVDIVIVM-----------------------------------------------------------------------------------------------------TFAGFAWTIAGALENGLIRRTEGDILAKCPLERFLAWSALCTHIFAFFIRVYRMWRILVKHDDSMWPAK--------------------------YQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSEMPSPAQ 1037
            MSD+E WEPL MVDY MLGFVGTVQ FALGVC+HLLSWR+WPPYVTKNVDIVIVM                                                                                                     TFAGFAWTIAGALENGLIRR+EGD+LAKC LERFLAWSALCTHIFAFFIRVYRMWRILVKHDDSMWPAK                          YQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSY VVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSEMPSPAQ
Sbjct:    1 MSDKEVWEPLAMVDYIMLGFVGTVQTFALGVCIHLLSWRHWPPYVTKNVDIVIVMVGGQRSVDILGKAVTVLKGRTADSHSFGRQTAHKVEKVNICPKKGRSRFVCHKQRSYIPFRLLLGPFAPFPLPSSNPPRLPPPLALFVLLPSSIPLAAFLQTFAGFAWTIAGALENGLIRRSEGDLLAKCYLERFLAWSALCTHIFAFFIRVYRMWRILVKHDDSMWPAKFLSVTFALDKVDLSRSTSPVLTTPVRYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYVVVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSEMPSPAQ 408          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17633.1 vs. uniprot
Match: D7FU00_ECTSI (Regulator of G-protein signaling 13 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU00_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 4.350e-131
Identity = 219/318 (68.87%), Postives = 251/318 (78.93%), Query Frame = 3
Query:  564 KYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDNQH-VYVRRVAIVYPALTTHAVLWGSIG-------------EPVMKKWTGDDEYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTDVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVDAAELEQRENRLLRAGGFLPPGSPPSP 1475
            +YQIMLLSS  LVP LV LLVPGAYVFDE VN CNTTSTSR VVLAMN  G   +C+LWFVC RQLRWVRKQFNEY+ M  TL C+TL+  SYA+VVVV LDN H V  RR+AIV+   ++  +  G +               P++KKW GD+EYLWSFTKGFSE+PSPAQLKASLAEQLSVEQLR EFR Y++TKVA+ELVDFYL+SLDREEI  +F RQAVTMRIVA+YIREGAP+QVNISG CRE+ILSTDVTAYDIFDRAR EVL +ME +F+  FVETEGFRRI  A+ LE RENRLL+AGG LP  + P+P
Sbjct:   11 RYQIMLLSSPCLVPLLVTLLVPGAYVFDEAVNLCNTTSTSRTVVLAMNAFGCCIICFLWFVCVRQLRWVRKQFNEYKEMTRTLLCVTLISVSYALVVVVALDNSHQVLARRLAIVWRGKSSGEIAGGDLHLVSLYLGQERLAERPLVKKWEGDEEYLWSFTKGFSELPSPAQLKASLAEQLSVEQLRIEFRGYMQTKVARELVDFYLESLDREEIHGFFGRQAVTMRIVARYIREGAPEQVNISGACREDILSTDVTAYDIFDRARAEVLALMEGDFKAGFVETEGFRRIAVASYLEDRENRLLQAGGLLPADTLPAP 328          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17633.1 vs. uniprot
Match: D7FIS3_ECTSI (Similar to retinally abundant regulator of G-protein signaling hRGS-r n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS3_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 7.060e-119
Identity = 196/257 (76.26%), Postives = 219/257 (85.21%), Query Frame = 3
Query:  696 LAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTDVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVDAAELEQRENRLLRAGGFLPPGSP 1466
            L MN +G Y +CYLWFVC R+L+ VRKQFNEY+TMK TL  LTL L SYA+VVVV+L  QHV VRRVAI+YP +TT+ +LWGSI EP MKK  GDDEYLWS+TKGFSE+PSPAQLKASLAEQLSVEQLR EFR+YI+TKVAQEL+DFYLDSLDREE+  +F RQA TMRIV +YIRE APDQVNIS ECRE+IL+TDVTAYDIFD AR EVL VMETNFQREFV TEGFRRI DA+E+E RE RLLRAGG LP  SP
Sbjct:    5 LGMNALGMYGICYLWFVCIRRLKSVRKQFNEYQTMKRTLLYLTLALLSYALVVVVLLAGQHVTVRRVAILYPVITTYILLWGSIREPFMKKILGDDEYLWSYTKGFSELPSPAQLKASLAEQLSVEQLRDEFRQYIKTKVAQELIDFYLDSLDREEVMGFFERQAATMRIVERYIREDAPDQVNISEECREKILATDVTAYDIFDEARAEVLVVMETNFQREFVTTEGFRRIADASEVEHREIRLLRAGGMLPSASP 261          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJQ0_9PHAE4.570e-27185.31RGS domain-containing protein n=3 Tax=Ectocarpus T... [more]
D7FTZ9_ECTSI2.240e-23376.74RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTZ7_ECTSI1.400e-21069.96Similar to regulator of G-protein signaling 16 n=1... [more]
D7FTZ6_ECTSI4.080e-20880.38Similar to regulator of G-protein signaling 16 n=1... [more]
D7FTZ5_ECTSI1.720e-17561.32Signal transducer, putative n=1 Tax=Ectocarpus sil... [more]
A0A6H5KAT5_9PHAE3.900e-17363.93RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K0N5_9PHAE1.040e-16974.93RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K025_9PHAE8.910e-16866.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU00_ECTSI4.350e-13168.87Regulator of G-protein signaling 13 n=1 Tax=Ectoca... [more]
D7FIS3_ECTSI7.060e-11976.26Similar to retinally abundant regulator of G-prote... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig97contigE-siliculosus-1a_M_contig97:27457..35655 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1290
Model size2826
Exons11
Ec32 orthologEc-11_003450.1
Ec32 ortholog descriptionRegulator of G protein signaling (RGS) domain
Hectar predicted targeting categoryother localisation
BRITEko00000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2CNEE@1,2QVMV@2759
EggNOG free text desc.Regulator of G protein signaling domain
GOsGO:0001101,GO:0003674,GO:0004888,GO:0004930,GO:0005096,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005886,GO:0006950,GO:0007154,GO:0007165,GO:0007186,GO:0008047,GO:0008150,GO:0009414,GO:0009415,GO:0009628,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009746,GO:0009749,GO:0009756,GO:0009987,GO:0010008,GO:0010033,GO:0010035,GO:0010182,GO:0012505,GO:0016020,GO:0023052,GO:0030234,GO:0030695,GO:0031090,GO:0031410,GO:0031982,GO:0033993,GO:0034284,GO:0038023,GO:0042127,GO:0042221,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051336,GO:0051345,GO:0051716,GO:0060089,GO:0060589,GO:0065007,GO:0065009,GO:0070887,GO:0071310,GO:0071322,GO:0071944,GO:0097305,GO:0097708,GO:0098588,GO:0098772,GO:0098805,GO:1901700,GO:1901701
KEGG koko:K16449
Preferred nameRGS1
Seed eggNOG ortholog2880.D7FU04
Seed ortholog evalue1.8e-197
Seed ortholog score695.3
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936542.458442-UTR-E-siliculosus-1a_M_contig97:27456..275621622936542.458442-UTR-E-siliculosus-1a_M_contig97:27456..27562Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 27457..27562 +
1696251123.1256208-UTR-E-siliculosus-1a_M_contig97:27456..275621696251123.1256208-UTR-E-siliculosus-1a_M_contig97:27456..27562Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 27457..27562 +
1622936542.4735956-UTR-E-siliculosus-1a_M_contig97:29194..292821622936542.4735956-UTR-E-siliculosus-1a_M_contig97:29194..29282Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 29195..29282 +
1696251123.139637-UTR-E-siliculosus-1a_M_contig97:29194..292821696251123.139637-UTR-E-siliculosus-1a_M_contig97:29194..29282Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 29195..29282 +
1622936542.7358425-UTR-E-siliculosus-1a_M_contig97:34313..356551622936542.7358425-UTR-E-siliculosus-1a_M_contig97:34313..35655Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 34314..35655 +
1696251123.2655952-UTR-E-siliculosus-1a_M_contig97:34313..356551696251123.2655952-UTR-E-siliculosus-1a_M_contig97:34313..35655Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig97 34314..35655 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936542.4876096-CDS-E-siliculosus-1a_M_contig97:29282..294471622936542.4876096-CDS-E-siliculosus-1a_M_contig97:29282..29447Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 29283..29447 +
1696251123.1506553-CDS-E-siliculosus-1a_M_contig97:29282..294471696251123.1506553-CDS-E-siliculosus-1a_M_contig97:29282..29447Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 29283..29447 +
1622936542.5063524-CDS-E-siliculosus-1a_M_contig97:29990..300861622936542.5063524-CDS-E-siliculosus-1a_M_contig97:29990..30086Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 29991..30086 +
1696251123.1611264-CDS-E-siliculosus-1a_M_contig97:29990..300861696251123.1611264-CDS-E-siliculosus-1a_M_contig97:29990..30086Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 29991..30086 +
1622936542.5223083-CDS-E-siliculosus-1a_M_contig97:30526..306361622936542.5223083-CDS-E-siliculosus-1a_M_contig97:30526..30636Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 30527..30636 +
1696251123.1713283-CDS-E-siliculosus-1a_M_contig97:30526..306361696251123.1713283-CDS-E-siliculosus-1a_M_contig97:30526..30636Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 30527..30636 +
1622936542.5396593-CDS-E-siliculosus-1a_M_contig97:31073..312471622936542.5396593-CDS-E-siliculosus-1a_M_contig97:31073..31247Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 31074..31247 +
1696251123.1817453-CDS-E-siliculosus-1a_M_contig97:31073..312471696251123.1817453-CDS-E-siliculosus-1a_M_contig97:31073..31247Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 31074..31247 +
1622936542.6074653-CDS-E-siliculosus-1a_M_contig97:31453..316201622936542.6074653-CDS-E-siliculosus-1a_M_contig97:31453..31620Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 31454..31620 +
1696251123.1921203-CDS-E-siliculosus-1a_M_contig97:31453..316201696251123.1921203-CDS-E-siliculosus-1a_M_contig97:31453..31620Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 31454..31620 +
1622936542.6270397-CDS-E-siliculosus-1a_M_contig97:32090..322211622936542.6270397-CDS-E-siliculosus-1a_M_contig97:32090..32221Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 32091..32221 +
1696251123.2037797-CDS-E-siliculosus-1a_M_contig97:32090..322211696251123.2037797-CDS-E-siliculosus-1a_M_contig97:32090..32221Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 32091..32221 +
1622936542.6645796-CDS-E-siliculosus-1a_M_contig97:32759..329091622936542.6645796-CDS-E-siliculosus-1a_M_contig97:32759..32909Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 32760..32909 +
1696251123.2157578-CDS-E-siliculosus-1a_M_contig97:32759..329091696251123.2157578-CDS-E-siliculosus-1a_M_contig97:32759..32909Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 32760..32909 +
1622936542.6852999-CDS-E-siliculosus-1a_M_contig97:33045..330991622936542.6852999-CDS-E-siliculosus-1a_M_contig97:33045..33099Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 33046..33099 +
1696251123.232884-CDS-E-siliculosus-1a_M_contig97:33045..330991696251123.232884-CDS-E-siliculosus-1a_M_contig97:33045..33099Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 33046..33099 +
1622936542.7047284-CDS-E-siliculosus-1a_M_contig97:33306..334081622936542.7047284-CDS-E-siliculosus-1a_M_contig97:33306..33408Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 33307..33408 +
1696251123.2440412-CDS-E-siliculosus-1a_M_contig97:33306..334081696251123.2440412-CDS-E-siliculosus-1a_M_contig97:33306..33408Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 33307..33408 +
1622936542.7227194-CDS-E-siliculosus-1a_M_contig97:34172..343131622936542.7227194-CDS-E-siliculosus-1a_M_contig97:34172..34313Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 34173..34313 +
1696251123.2555332-CDS-E-siliculosus-1a_M_contig97:34172..343131696251123.2555332-CDS-E-siliculosus-1a_M_contig97:34172..34313Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig97 34173..34313 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig97.17633.1prot_E-siliculosus-1a_M_contig97.17633.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig97 29283..34313 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig97.17633.1

>prot_E-siliculosus-1a_M_contig97.17633.1 ID=prot_E-siliculosus-1a_M_contig97.17633.1|Name=mRNA_E-siliculosus-1a_M_contig97.17633.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=430bp
MSDEEAWEPLTMVDYTMLGFVGTVQAFALGVCVHLLSWRNWPPYVTKNVD
IVIVMTFAGFAWTIAGALENGLIRRTEGDILAKCPLERFLAWSALCTHIF
AFFIRVYRMWRILVKHDDSMWPAKYQIMLLSSISLVPPLVALLVPGAYVF
DETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYE
TMKWTLSCLTLLLFSYAVVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGS
IGEPVMKKWTGDDEYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRAEFR
RYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQV
NISGECREEILSTDVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIV
DAAELEQRENRLLRAGGFLPPGSPPSPCV*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig97:27457..35655+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig97.17633.1 ID=mRNA_E-siliculosus-1a_M_contig97.17633.1|Name=mRNA_E-siliculosus-1a_M_contig97.17633.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8199bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:27457..35655+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CATACGTCCGCCGTTCTGATTTCTGAAGGTCCGCCACCGCCCGCGGATAC TTACAACGACGAGCGAGGCTACCACGTGCGGTCGTTCGGAGATGCTTACG AGAAAGGTCAGCACGTTTGATACCACATGGGCCCACCTCTCTCGCTTGCT CTCGGACGGGGACCTGTCGGAAGGGACCCGTCCCTGTGTCACAAAAAAAT TATGCGAGCTTCTCGCTTTATTTTTCACGTTTTTCGGAGAGAATGCTGTC GAAGCCGCCAGGCTACACGTCTGCACGTGGGTCTTTATGGAAATACTCAG GTGTAGGACGCCTGCTGTGCTAGGAACGCCTGCACGTCTGTTGGTGCTTT CGGTCACTGCCGAGGCAACTGCAATGTACAATGTATCGAGAAGGCCCCAT AAACTCTCTGCACACAATGGTTGACGGATGATATTTCATGTCCGTCATGC CGTTCATGACGCAGAGGTAGCGAGTGGCTGCTGTACAACGGGCGTGACAC GGGCGAGGCTTATACCCCGTAGCACGGTCATTAGAATACTGTGTAGCTAT GCTATTCTATCATCTGCGTGCGTGCGAGCGGTCTCTCGGCATCGATACTT TTCTTTGCGGGACAACACCGTCTCTCGTGTTCTGGTTGGGCATTCCGAGC AAACGATGGAGTTGGATGAAGTTGTAATCGTTGTGACTGCGCGTCCTCGG CGTGGCAATTAACCGCAGACCAGGGCACAGGGCATGCGCATGTTGCACAG TAAGTACCCAAGTGAGCGGCACCGACGTATGCCTACGCACCTCCCTACAG CCAAAGCAGTACGTGTGGAAACTCGAAAAAAAAACACCTCGACACCTCGA CCAGTCTGCCTCCACGAAACTCGATGTTCCAACGCTCCAACAACGTGTCG GGTTACGTCTCGGGGCGATGCACGATGACACGCGGGCAGCAGGGCCAAAC CTGCACCCGGCTGCCAGCTGCCAGTTGCGATGTTTCCCACTTTTTTCTCC AAAGCAATTGCTGCGTGCGTACGGCGCCCACCCATGTCTGCTCGGCACAT CTTGAACGAAGTACCTTGAAGTAAAGTAGTAGCATTCGAACCCCGGTCGC AACATTTCCCAACTGATCAAGATCGTCCCAAAAACCTAACGCCTGGTATC AAACAGCGGTTGGTTTCAGACGCCTCCGGCATTCGTGGATTACCATCTCG GCAAATACGCACCCGTTCCATGTTGAGTACTGTATGGCCATTGTCGTCGT CGTCGTCATTGTTTTTTTTTATGGTGGCGGTGAAATACTTGTACAGCACG AACATTGGATGCCCGTAGGGTAGAACTACTGTAGTCGATGTCCCAACCGA GGGAGGGCTGCTGAATCCGGAAGGAAAATGCGTAAGTTTTACACCAACCC TAAGAAAGTAGCGGCTGGAGTCTCGATGTGCGTGTTTGTGTTATAAAAGA TTTGGAGACGCCGCCTCACTGATTTGCTGCCCCAGCGTTTTGGAGGTTCT CCGCCCTGATGCCTTACCTCGCTCTCGAACAAACAGAACCGGCCCACTCT CCCGCTTGCCCCCCCCCCCCTACAACAGCAGTAACATGTAGAATAGAAAG GGAAACGCATAGGTGCAATTAAATATGCCGAATGCCGAACCGTGTGGGAC TCCTCTGCAGGCCTGCCGTAGGACAATACGCACACCAACCCCTCCCTACC CTGCTTCTCCGCCGCTGCTGCCGTCTCGCGCGTGGCAGAATTCCTCTCAA GGTTCATCATCAGCCTTAGCAGCCGCAAAGAGTCTTGACTGTACCGCTCA CGCTTGGAGGGAGGCTTCCGCAGAACATGTCGGACGAAGAAGCCTGGGAG CCCTTGACCATGGTGGACTACACCATGCTGGGGTTCGTGGGGACCGTCCA AGCCTTTGCCCTGGGCGTTTGCGTCCACCTGTTGAGCTGGCGGAATTGGC CGCCGTACGTGACGAAGAATGTCGACATCGTCATCGTCATGGTGTGTGGG CAGTAGACGAAGCTGCACACACCTTGCTGCCTGCTTGCTGTTACTGTTGT TGGTTGCTCGCTTCGACACTCGCCCCATGTCTAGGTAGTGTTTCGTTCGC GATCTTCGGAACGGCTGGGTCCACGTCGGCTCTCACGTTCCAAGGTTGGG TGATTCGTTGTTGCCCATTCCCACGCGGTGATGAAAACGACGACTTCCGC CGCACCTGGTGCTCGCGCTGATTGCAAGTTGGTGGTAGTTCTGCAGGGAG AGTGTTTTCCTGCTTGGTGTTTCCGTCGGGAGAATCTTTCACTATGAGTT GCCCTTAGTGAAGCAACAACGACCGGCCCGCGGTCTCTGTCTGTCTGTCT GTCTGTCTGTCTGTCTGTCTGCCTCTCTTCTCTATCTCCCCGTACAACCG TCTCCGTCTACTAATCGACCCCTTAGTGCTTCTCCCTCTGTTTCCTTTGA CCCACCCACTCGGCTTTCGCCGTCTCTTGCGCTGTCCGTGCTTCTCCCGC CCCGCCCTCGATCCCGCTGGCTACATTCCCCCAGACGTTCGCTGGATTCG CGTGGACAATTGCGGGCGCTCTGGAAAACGGGCTAATCCGGAGGACCGAG GGCGACATTCTTGCGAAGTGCCCCCTCGAGGTGCGCGACCGCCTCTCTCT CTCGGAGGGTCACCGAAGAGGCATGCAGCGGGAGAAACTAGTCTTGTGCG ACTTTCCTCCTGTGTTTCCCCAACGGACACGCCGCAACAACCGAATGAAA AACTGACGCCCACGGTAGACGGGACGACTTGCGCCTCGCCCACAAAATTT TGAGTTGTTTGTGCCTGAAGGCAGGCGTGTCGCGGGTGGAGTTGCTATGT GGTATTGGCGACTGCTTGGTTGATGATTCGAGGCAAGGTAGCTGTGTGTT CATGGTTGCGTCCACGTTGTGTCCCGATTGTGATTTCACGAGCCGGTGGC TTGGTCGGCCGGTCCCTCATGGAGCGTTTGTAACTCTGGTCTCGTTCGTT CACCCTTTTTTCTTCTTTTTGTCTGCAACCGCCCCTCCTGCCCTTTCGCC CACTTTGTCTGACGCCCCAGAGATTCCTAGCGTGGTCGGCGCTGTGCACG CACATCTTTGCGTTTTTCATCCGGGTGTACCGCATGTGGAGGATTTTGGT CAAGCACGACGATAGCATGTGGCCCGCAAAGTGAGCTCCGGCGCCGTTGT TGGTCGCGGCATTGCTAGGGTACCTACACAGCGGAAGTAGGAGGGCCTTC GAGTCTCATCGTCGATGCTTTAGGGCAGGGGTGCTGACTTTTGTGGACAG GGATTGTATCTTGTGAACAAAGCAAGGTGTCACACATCCTTGTGGGCCGT TTTTCAGCATTGGTTATCCCCACACACCTTGGAGGCGTCGAGAACAGCCG GGGGTTAGGGTAATTATGCTACGTTGTATGAGCTAGCTAGGCCACCGCCG ACGCGAAACGTTTGGAGAATGGGGCATCCAGCTTGCACAGAGTAGAGGAA CGTAGATATACCGAGGCGCAGATTTTCTCTCTGAGCTGCTATGCTTGTCA CGTTTGTGTTGAGACAAGGTCGACTTGACCCGCCCTACCTCACCCGTATT GACAACACCTCTTTCAGGTACCAGATCATGTTGCTTTCGAGCATCAGCCT GGTTCCACCGCTGGTTGCCCTGCTTGTTCCCGGTGCCTACGTCTTCGACG AGACTGTCAACTCGTGCAACACCACGAGCACGTCGAGAAACGTGGTTTTG GCAATGAACGTCGTGGGGTTCTACACCATGTGCTATCTTTGGTGAGATGG GGGCAAGAGAGGGTACGGTTGATGCTGACATCGGTGGTTCGACTTGTGAG GTATTTTTTGTCGTCGTCATTGTTGCTGTTGTTGCCGTTGGTGGTGGTGG TGGTGATGTCGAAGGTGGCGCCCATCTTACCTGCACGTTCCTGCAACAGG TCTCATGTGTCCCGTGTGCCCTCTATGTCTCTTGCCGCCACGATCAGGTT TGTGTGCACCCGTCAGCTGAGATGGGTCCGGAAGCAGTTCAACGAGTACG AGACGATGAAGTGGACCCTGTCATGCCTGACTTTGCTCCTGTTCAGCTAT GCGGTCGTGGTGGTCGTTGTCCTGGACAACCAACATGTTTACGTCAGAAG GGTGGCCATCGTGTGTGAGTCACGGCACCGGTTCGAGATTATCTTGGAGT TGTTGTTGGACAGGCAGGCAGAGTCGTTGGCGTTACCCTTGCTGCTGGTG CTGGTGCTGCTGTCGTCGTCGTCGTCGTCGTTGTCGTTGTCGTTGTCAAT CGTTTTTCTTTCATATGGTTGGCCATTTTGTCGTCGTCGTGCACCCAACA TGAGGTGTTGTTCTGTGGAGCGTGGGACGCTGAAGGCAGCGCCACGTCTG TGCGGGGCGGACTTGATAAATTGTGTTTGGCAACGGCGTGCGGAGGAGGA AGCCGCCTGGAGACCGTGTACCCGCGCGTTTAATGGCCTGGACACGTTTG CCCTGTGTGAGACAAGAACGGAAGGGCGGTTCGTCGAGACCGTAAGAAGA AAAAGAGACACAAAGCCCCGCTACCGCCACACCTGATGCGGGTCTTATCT CACCCCCCCCCGGCAACATCCCGTTACCGTGCAGACCCTGCGCTAACGAC GCACGCGGTGTTGTGGGGTTCCATCGGGGAGCCTGTGATGAAGAAGTGGA CTGGAGACGACGAGTACCTGTGGTCGTTCACCAAGGGCTTCTCGGAGATG CCTTCGCCGGCGCAGGTATTTTATCAACGGCATCGAACTGATTCCGACGG TTTGTAGCACAATATGTAGTGCAAGCTAGATACCAGGCGGAGTGTTTGCG TCATGCAGTAAGAAGATACCAAGAATGATCAAAAGCTCACTCCGCGTTCA CCATGGCTTGGTTTTTCGTGGAATCCTCCTCAGAGTCCTGCACAAAACTG GGAAAGCATATCCCCGCGAGAAAGCCCTTGACAGACAGGGGTATTGGTCG TTGGCGGGGGGAGGGGTTCACGTCATCATGCCCCCCCGGCCCCAGGACGC AAATCGTTCCTTCACACGTTAAGAAGCTTCTCGTACCACGACCGCGAGAG ACGTTGCAGCTGACTGCAATAAAAAAGGCGATGCCAAACCCGCCCCTCGT GCGTACGTCGAACCATTGTATTGTGGCATCTTGGATGTGTTGACCCCCTA CCTCCCCGTCTTTCCCCTGTTTCGGTGTCTCGGGTGTGCTGACCTCCTCA CTCCCTGCTCTTCCCTGCCCCTCCCTGCCCCTCCGTGCTGAACCCCCCAA AAGCTCAAGGCTAGCCTCGCAGAGCAGCTGTCCGTAGAGCAACTCCGGGC CGAGTTTCGGAGATATATCGAGACAAAGGTGGCCCAAGAGCTGGTGGACT TTTACCTTGACTCGCTAGACAGGGAGGAGATCAAGGAATACTTTGCCAGA CAGGTAACGAACCACTAGACATCCTTCACCCTTCGCATGCCATGAGAGAC GGAGGTGCGATCAAAGGTGGCTTTAACAGACAGGCCTGCCGTCCGTTCAT GACACCCTCTCTTCCCCCTTTTTTTCGTTCTTTTGTCAGGCGGTAACGAT GCGTATCGTGGCGCAGTATATCAGAGAAGGGGCCCCTGACCAGGTGGGTG TTGTTCTCGTTTTTGGTTTGCCACTGAATACCAGTATTCGTCTTACAAGA TGCAAAGCATTGGGTTAACTAGTGACGGAAATCTAAACTGCTGCTTGCAA AATGCGTTGCTTCTATTGTGCTGCGAGTACACCATTAGCAAGATCCACCC CACCCGTCTTTGTAACGATATTTGGCGTGTGTCATTTGTCGCGGCGGCAG GTGAACATTTCGGGGGAGTGCCGGGAGGAGATTTTGTCGACGGACGTGAC GGCCTACGACATCTTCGACCGCGCTAGAGTAGAGGTTCTGACCGTTATGG AGGTAAGAATGAAGAGGGGGAGGGTTCGACATCGCCTCTGGCTATCGCTC GACTCAAGACCCGTTTTTTTTTTTCGTTGGCCGTTAAAAAGAGATTGTGC ATTGTCTTGTGGTGAGCCTTGATGGCCTTTTCGACAGCCACGCTTTGATC ATCTGATAGTACAAGAAAAGGAATGATGGACCTGAAACGTGCTGCGTTGT ATTTTCATTGCTTTGATTGGTGCGCCGTTCAGAGCGGGAGGGCGTTCTTC GTGCGATCTACCGAACAACGGTGTCACACCCAAACCACACGCTACCACTG CCCAGTCTTGCACCCCGGCGCCGTCCAATAGCCAAGCTCACAGCCGTGTT TTGCAAGGTTTTGTTGCGCTTTTTTTTTTTCTTCACTTCGAATCAACGCT CACAGCCTTTGTGCTGTTTACTCCAACCCGTGGTGACACAGGGTGCGTCT CCTGAGGCTCCCTACCCACCCGTCCTGTGGTGATTTGCCTTCGTTTTCTT TTTACGAGAAGAGTGCAACACTCTCTTCCCTCTGTGTACACGCGAACTAG CGCTTTCTAACCAGATGAGGAACGGAAGCGAGAGAAGAACTCACTTTGCA AAAATATCTTGCTTACGCCGGGATTCCTGGCCCTGTCCACTGGAGGGTAT TCGAGGACATCAGCTAGACTACCGGGACGACCGGCTTTACTACTGCCATA TTCCAGTTGTTCAGTCTTCGTGCCGTCTTTTCGCCGCCCCGACAAACTTG AAATCGACGACCGCAGACCAACTTCCAGAGGGAGTTCGTAGAGACGGAGG GGTTCCGCCGAATCGTCGATGCGGCCGAGCTGGAGCAGCGAGAGAACCGC CTCCTGCGGGCAGGGGGCTTCTTGCCGCCGGGCTCCCCGCCTTCGCCCTG CGTGTGACGACGTCCGCTTCCTCTTTCCCGACGGGGTCTCCTATTGGACG CTCGCTTCATGCTTGCTTGCCCCCGTTGGACAAGAGCTGTCGGCACTCAG CCCCCCCGCGGGAACCGCTCACGCTTCTTTGCCTACTGTGACGGTACGCA ATGTCGATGGGGCTGTTGTGGAGCGGGGAAGTGGTGGTGGTGTGCAAGAG GTCGATGCTGCTACTGTTGATGCTGACGCAGGCGGTAATGGTGGGAATGG GGAGAAGCCCCACTCGGGTGTGGGCGTCCACTGACTGTGCCTCCGCGAGT GGTCATGTCGGTGGAGCGAAAGGGCCACGACAGGGATGGCGATCTGGTTG CTGGTACTGACGGCAGCGATGGAGCGTGGTGGCGGTGACGGCAAACTCGA GGTGATGCTCTGTGCACGAGAGGTACTCCTGTGGCAAATGTTGGTGATGA AGCCACCGCTGGCAGCATGTATCGGACTGGCGCCTCCGACGGCGAGTGGA AGGTGCTGACACGACCGCGTCTTTCTCCCTAAGGAAGGGTCGATGGTGCC TAAGGGAGGGTCGATGGTGTCCTTTGAAAACGAAGGGATGGCGTCCCTGG TGCATGCAGGGGTCTGTACGCAGGATGAGTCACACACGTTAACACTAATC GCCGGGGCGTTGTTGGTGGCCCAATGTATTCATTCTATAGGTGTCATGGT TGGCTTTCTTTTTTTTCGCATGGGCCGGCAGCGGTGACCGGATGACCAAT GAAAAGCTCGGGTCAGGAAGGGAAGTGAGAACTCCTTTTTTGTTGGTGCC CCCCGACAGGTGCCGGTAGATGTGGTGGAGACCGCTGGACAGACTGTTCG GCCTCCGGATTCAGAGCATGAAAGCGTCACACACATCTCCAGGCTCTTTC CATCTCCAGGCGCCCGATATCTACCGGAAGGATGACTCGAGGTTGATGAT CGTTGTTTGTTAGTACGAGCGTGTTTACATTGTTGGGTGGCTGTGATCTC AGTTTTGTTTTGTTTGTTCGTGGATGCGCCTCTTACGCGCGCGTGTGTGT GCGGAAGGTTGCGATGTCATTCACGTCGTCCGGGAAAAATACGGCGTTCT TTACGAAGGCGATATGCCTAATGTGCATACTAGTTTGGGAGGTTCTTGTG GACGATTCATTGGCTCATCGATGTGTATTGGTTGTGCTTGTGTGGGAGGT TTTGGGTTCGAGACGCTTGCGGGGTTCCGGCAAGGCACGCGGTGTTATTC GTGTAAGAAGTCATTCTGGCGTCCACACTCCAGGCGGTTTGGTGCGCTGC TGTTCGTCCTGCTACTAGGTACATCAAGTTCGGGAAGGTTTGAATGGGG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:27457..35655+

>mRNA_E-siliculosus-1a_M_contig97.17633.1 ID=mRNA_E-siliculosus-1a_M_contig97.17633.1|Name=mRNA_E-siliculosus-1a_M_contig97.17633.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2580bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:27457..35655+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTCGGACGAAGAAGCCTGGGAGCCCTTGACCATGGTGGACTACACCAT
GCTGGGGTTCGTGGGGACCGTCCAAGCCTTTGCCCTGGGCGTTTGCGTCC
ACCTGTTGAGCTGGCGGAATTGGCCGCCGTACGTGACGAAGAATGTCGAC
ATCGTCATCGTCATGATGTCGGACGAAGAAGCCTGGGAGCCCTTGACCAT
GGTGGACTACACCATGCTGGGGTTCGTGGGGACCGTCCAAGCCTTTGCCC
TGGGCGTTTGCGTCCACCTGTTGAGCTGGCGGAATTGGCCGCCGTACGTG
ACGAAGAATGTCGACATCGTCATCGTCATGACGTTCGCTGGATTCGCGTG
GACAATTGCGGGCGCTCTGGAAAACGGGCTAATCCGGAGGACCGAGGGCG
ACATTCTTGCGAAGTGCCCCCTCGAGACGTTCGCTGGATTCGCGTGGACA
ATTGCGGGCGCTCTGGAAAACGGGCTAATCCGGAGGACCGAGGGCGACAT
TCTTGCGAAGTGCCCCCTCGAGAGATTCCTAGCGTGGTCGGCGCTGTGCA
CGCACATCTTTGCGTTTTTCATCCGGGTGTACCGCATGTGGAGGATTTTG
GTCAAGCACGACGATAGCATGTGGCCCGCAAAAGATTCCTAGCGTGGTCG
GCGCTGTGCACGCACATCTTTGCGTTTTTCATCCGGGTGTACCGCATGTG
GAGGATTTTGGTCAAGCACGACGATAGCATGTGGCCCGCAAAGTACCAGA
TCATGTTGCTTTCGAGCATCAGCCTGGTTCCACCGCTGGTTGCCCTGCTT
GTTCCCGGTGCCTACGTCTTCGACGAGACTGTCAACTCGTGCAACACCAC
GAGCACGTCGAGAAACGTGGTTTTGGCAATGAACGTCGTGGGGTTCTACA
CCATGTGCTATCTTTGGTACCAGATCATGTTGCTTTCGAGCATCAGCCTG
GTTCCACCGCTGGTTGCCCTGCTTGTTCCCGGTGCCTACGTCTTCGACGA
GACTGTCAACTCGTGCAACACCACGAGCACGTCGAGAAACGTGGTTTTGG
CAATGAACGTCGTGGGGTTCTACACCATGTGCTATCTTTGGTTTGTGTGC
ACCCGTCAGCTGAGATGGGTCCGGAAGCAGTTCAACGAGTACGAGACGAT
GAAGTGGACCCTGTCATGCCTGACTTTGCTCCTGTTCAGCTATGCGGTCG
TGGTGGTCGTTGTCCTGGACAACCAACATGTTTACGTCAGAAGGGTGGCC
ATCGTGTGTTTGTGTGCACCCGTCAGCTGAGATGGGTCCGGAAGCAGTTC
AACGAGTACGAGACGATGAAGTGGACCCTGTCATGCCTGACTTTGCTCCT
GTTCAGCTATGCGGTCGTGGTGGTCGTTGTCCTGGACAACCAACATGTTT
ACGTCAGAAGGGTGGCCATCGTGTACCCTGCGCTAACGACGCACGCGGTG
TTGTGGGGTTCCATCGGGGAGCCTGTGATGAAGAAGTGGACTGGAGACGA
CGAGTACCTGTGGTCGTTCACCAAGGGCTTCTCGGAGATGCCTTCGCCGG
CGCAGACCCTGCGCTAACGACGCACGCGGTGTTGTGGGGTTCCATCGGGG
AGCCTGTGATGAAGAAGTGGACTGGAGACGACGAGTACCTGTGGTCGTTC
ACCAAGGGCTTCTCGGAGATGCCTTCGCCGGCGCAGCTCAAGGCTAGCCT
CGCAGAGCAGCTGTCCGTAGAGCAACTCCGGGCCGAGTTTCGGAGATATA
TCGAGACAAAGGTGGCCCAAGAGCTGGTGGACTTTTACCTTGACTCGCTA
GACAGGGAGGAGATCAAGGAATACTTTGCCAGACAGCTCAAGGCTAGCCT
CGCAGAGCAGCTGTCCGTAGAGCAACTCCGGGCCGAGTTTCGGAGATATA
TCGAGACAAAGGTGGCCCAAGAGCTGGTGGACTTTTACCTTGACTCGCTA
GACAGGGAGGAGATCAAGGAATACTTTGCCAGACAGGCGGTAACGATGCG
TATCGTGGCGCAGTATATCAGAGAAGGGGCCCCTGACCAGGCGGTAACGA
TGCGTATCGTGGCGCAGTATATCAGAGAAGGGGCCCCTGACCAGGTGAAC
ATTTCGGGGGAGTGCCGGGAGGAGATTTTGTCGACGGACGTGACGGCCTA
CGACATCTTCGACCGCGCTAGAGTAGAGGTTCTGACCGTTATGGAGGTGA
ACATTTCGGGGGAGTGCCGGGAGGAGATTTTGTCGACGGACGTGACGGCC
TACGACATCTTCGACCGCGCTAGAGTAGAGGTTCTGACCGTTATGGAGAC
CAACTTCCAGAGGGAGTTCGTAGAGACGGAGGGGTTCCGCCGAATCGTCG
ATGCGGCCGAGCTGGAGCAGCGAGAGAACCGCCTCCTGCGGGCAGGGGGC
TTCTTGCCGCCGGGCTCCCCGCCTTCGCCCTGCGTGTGAACCAACTTCCA
GAGGGAGTTCGTAGAGACGGAGGGGTTCCGCCGAATCGTCGATGCGGCCG
AGCTGGAGCAGCGAGAGAACCGCCTCCTGCGGGCAGGGGGCTTCTTGCCG
CCGGGCTCCCCGCCTTCGCCCTGCGTGTGA
back to top