prot_E-siliculosus-1a_M_contig96.17617.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig96.17617.1
Unique Nameprot_E-siliculosus-1a_M_contig96.17617.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length212
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17617.1 vs. uniprot
Match: A0A6H5L4M4_9PHAE (Resolvase/invertase-type recombinase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M4_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 1.600e-36
Identity = 85/202 (42.08%), Postives = 123/202 (60.89%), Query Frame = 0
Query:    1 FYATITENRAFLPATPVDIKTSRVCSLDMGERTFGTLYDPDGTIAFLGTDANTKVKNRLRVIYQKRNGLKTKLSYNKRLRVLNACRRSSAKLKNMIKDMHNRLADWLVGQYDLIIIGKLGIGVMKTK--RRGKRVLQSLSHFSFRRTLLQKATLARKVVKVVSEAYTTKQCNRCGYMNWTIGSSEVFSCKNCKIVCHRDVHS 200
            +YAT+T+ R   P TP      RV SLDMG R FG+ Y  DG+I F+G +A  K+      + +KR  LK KL  +K  ++    R+ S ++ N++ +MHN++A +LV  YD+I++G+L  GVMKTK  R  K +  SL H+ FR+ L+       K V +V E  TTK C+RCG++NW + + EVF+C  CK  C RD+HS
Sbjct:  382 YYATVTKTR---PVTPKS-DGLRVVSLDMGSRKFGSFYSSDGSIGFIGEEAGEKLSR----LIKKREYLK-KLKESKS-KLTKGWRKVSKRIANLVNEMHNKVALYLVRNYDIIMVGRLSNGVMKTKSHRNQKLLHASLKHYQFRQRLINNGNDHGKKVAIVPEQLTTKLCDRCGFINWKMKAEEVFTCPKCKHSCDRDIHS 573          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17617.1 vs. uniprot
Match: A0A845YEN4_9CYAN (Transposase n=2 Tax=Symploca sp. SIO2G7 TaxID=2607798 RepID=A0A845YEN4_9CYAN)

HSP 1 Score: 94.0 bits (232), Expect = 4.030e-19
Identity = 59/194 (30.41%), Postives = 108/194 (55.67%), Query Frame = 0
Query:   22 SRVCSLDMGERTFGTLYDPDGTIAFLGTDANTKVKNRLRVIYQKRNGLKTKLSYNKRLRVLNACRRSSAKLKNMIKDMHNRLADWLVGQYDLIIIGKLGIG--VMKTKRR-GKRVLQSL---SHFSFRRTLLQKATLARKVVKVVSEAYTTKQCNRCGYMNWTIGSSEVFSCKNCKIVCHRDVHSGRGIFIRSM 209
            +RV +LD G RTF T YD + +I  +G+    +++     + +  + +    +  +R  +  A  R   K++N++KD+HN+ A +LV  Y ++ +        V+K+KR+  K+  +++   SHF F++ LLQ A   R +V + +E+YT+K C  CG+++  +G ++ F C  C    HRD +  R I IR++
Sbjct:  155 TRVIALDPGVRTFLTGYDGE-SIVEIGSGDIGRIQRLCAYLDKLMSRIDLSSAKRQRRAMRKASHRIRRKIQNLVKDLHNKAARFLVDNYKVVFLPTFDTSEMVVKSKRKLAKKTARNMLTWSHFKFKQHLLQMAQRERVIVVLCNESYTSKTCPECGHIHSKLGGNKKFQCPQCGYSAHRDWNGARNIMIRAL 347          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17617.1 vs. uniprot
Match: A0A6P0HQ39_9CYAN (Transposase n=3 Tax=unclassified Okeania TaxID=2634635 RepID=A0A6P0HQ39_9CYAN)

HSP 1 Score: 93.2 bits (230), Expect = 8.400e-19
Identity = 56/200 (28.00%), Postives = 105/200 (52.50%), Query Frame = 0
Query:   16 PVDIKTSRVCSLDMGERTFGTLYDPDGTIAFLGTDANTKVKNRLRVIYQKRNGLKTKLSYNKRLRVLNACRRSSAKLKNMIKDMHNRLADWLVGQYDLIIIGKLGIGVM------KTKRRGKRVLQSLSHFSFRRTLLQKATLARKVVKVVSEAYTTKQCNRCGYMNWTIGSSEVFSCKNCKIVCHRDVHSGRGIFIRSM 209
            P+  + S+V +LD G RTF T +D +  + F   D   K++     +    + +   ++  +R  +  A  R   K+++++KD+HN++A +LV +Y +I +       M      K  +R  R + S SH+ F++ L+Q A     +V + +E+YT+K C  CG+++  +G ++ F C  C    HRD +  R I +R++
Sbjct:  159 PIPTEQSKVIALDPGVRTFLTGFDSEKIVEFGNGDMG-KIQRLCSHLDNLMSRIDLSVAKRQRRAMRKASYRIRGKIQSLVKDLHNKVAQFLVKEYKVIFLPTFSTSEMVVKSGRKLNKRTARNMLSWSHYKFQQHLIQMANRHNVLVVLCNESYTSKTCPECGHVHKQLGGNKQFHCPKCGYSAHRDWNGARNIMLRAL 357          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17617.1 vs. uniprot
Match: A0A6M0BGJ5_9CYAN (Transposase n=10 Tax=unclassified Moorena TaxID=2683338 RepID=A0A6M0BGJ5_9CYAN)

HSP 1 Score: 92.4 bits (228), Expect = 1.450e-18
Identity = 68/199 (34.17%), Postives = 106/199 (53.27%), Query Frame = 0
Query:   20 KTSRVCSLDMGERTFGTLYDPDGTIAFLGTDANTKVKNRLRVIYQKRNGLKTKLSYNK-RLRVLNACRRSSAKLKNMIKDMHNRLADWLVGQYDLIIIGKLGIGVM------KTKRRGKRVLQSLSHFSFRRTLLQKATLARKVVKVV--SEAYTTKQCNRCGYMNWTIGSSEVFSCKNCKIVCHRDVHSGRGIFIRSM 209
            K  RV +LD G R F T YD +  +  +G     ++ NRL     +     TK  + + R ++  A  R   K++ ++KD+H+++A +L+G+Y LI +       M      K  R+  R + S SH+ F + L Q A  ARK V VV  +E+YT+K C  CG+ +  +G S++F C  CK+   RD+  GR I IRS+
Sbjct:  153 KQERVIALDPGNRAFLTGYDGENVLE-IGKGDIGRI-NRLCSHLDQLLSRATKSPFKRQRHKMRKAADRIREKIQCLVKDLHSKVASFLIGKYKLIFLPTFATSKMVLKSSRKINRKTVRNMLSWSHYKFAQHLTQMA--ARKNVLVVRCNESYTSKTCTNCGHRHNKLGGSKIFRCPECKMELPRDIGGGRNIMIRSL 347          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17617.1 vs. uniprot
Match: A0A6P0XDS6_9CYAN (Transposase (Fragment) n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0XDS6_9CYAN)

HSP 1 Score: 88.2 bits (217), Expect = 9.100e-18
Identity = 54/200 (27.00%), Postives = 104/200 (52.00%), Query Frame = 0
Query:   16 PVDIKTSRVCSLDMGERTFGTLYDPDGTIAFLGTDANTKVKNRLRVIYQKRNGLKTKLSYNKRLRVLNACRRSSAKLKNMIKDMHNRLADWLVGQYDLIIIGKLGIGVM------KTKRRGKRVLQSLSHFSFRRTLLQKATLARKVVKVVSEAYTTKQCNRCGYMNWTIGSSEVFSCKNCKIVCHRDVHSGRGIFIRSM 209
            PV    S+V +LD G RTF T +D +  + F   D   K++     + +  + +   ++  +R  +  A  R   ++++++KD+HN++A +LV +Y +I +       M      K  ++  R + S SH+ F++ L+Q A     +V + +E+YT+K C  CG+++  +  ++ F C  C    HRD +  R I +R++
Sbjct:   23 PVPTSQSKVIALDPGVRTFLTGFDGEKIVEFGNGDMG-KIQRLCSHLDRLMSRIDLSVAKRQRRAMRKASYRIRERIQSLVKDLHNKVARFLVKEYKVIFLPTFSTSEMVVKSGRKLNKKTARNMLSWSHYKFQQHLIQMAQRHNVLVVLCNESYTSKTCPECGHIHKKLSGNKKFQCPQCGYTAHRDWNGARNIMLRAL 221          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17617.1 vs. uniprot
Match: UPI001F5D8911 (transposase n=2 Tax=Phormidium TaxID=1198 RepID=UPI001F5D8911)

HSP 1 Score: 89.7 bits (221), Expect = 2.040e-17
Identity = 63/202 (31.19%), Postives = 105/202 (51.98%), Query Frame = 0
Query:   16 PVDIKTSRVCSLDMGERTFGTLYDPDGTIAFLGTDANTKVKNRLRVIYQKRNGLKTKLSYNKRLR--VLNACRRSSAKLKNMIKDMHNRLADWLVGQYDLIIIGKLGIGVM------KTKRRGKRVLQSLSHFSFRRTLLQKATLARKVVKVVSEAYTTKQCNRCGYMNWTIGSSEVFSCKNCKIVCHRDVHSGRGIFIRSM 209
            P   +  RV +LD G RTF T YD + TI  +G +   ++      + Q  +  K  LS NKR R  +  A  R  +K++N++KD+HN+ A +LV  Y LI +       M      K + +  R + + SH+ F + L Q A     +V   +E++T+K C+ CG+++  +G +++F C  C     RD + GR + +RS+
Sbjct:  197 PTPTQQERVIALDPGVRTFLTGYDGE-TILEIGQNDIGRINRLCTHLDQLMS--KIALSSNKRQRYKMRKAATRMRSKIQNLVKDLHNKSASFLVNNYKLIFLPTFETSQMVERQTRKIRSKTARNMLTWSHYKFAKHLEQIAVRNGVMVVRCNESFTSKTCSECGHIHEKLGGNKIFRCPECGYEAPRDWNGGRSVMLRSL 395          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17617.1 vs. uniprot
Match: A0A6P0U237_9CYAN (Transposase n=6 Tax=unclassified Okeania TaxID=2634635 RepID=A0A6P0U237_9CYAN)

HSP 1 Score: 89.0 bits (219), Expect = 2.870e-17
Identity = 56/199 (28.14%), Postives = 100/199 (50.25%), Query Frame = 0
Query:   17 VDIKTSRVCSLDMGERTFGTLYDPDGTIAFLGTDANTKVKNRLRVIYQKRNGLKTKLSYNKRLRVLNACRRSSAKLKNMIKDMHNRLADWLVGQYDLIIIGKLGIGVM------KTKRRGKRVLQSLSHFSFRRTLLQKATLARKVVKVVSEAYTTKQCNRCGYMNWTIGSSEVFSCKNCKIVCHRDVHSGRGIFIRSM 209
            +  K S+  ++D G RTF T YD +  + F   D   K++     +    + +   +   +R  +  A  R   ++++ IKD+HN++A +LV  Y +I +       M      K  RR  R + S SH+ F++ L+Q A     +V + +E+YT+K C  CG+++  +G ++ F C  C    HRD +  R I +R++
Sbjct:  160 IPTKKSKAIAVDPGVRTFLTGYDGEKIVEFGNGDMG-KIQRLCSHLDNLMSRIDLSVVKRQRRAMRKASYRIRERIQSHIKDLHNKVAQFLVNHYKIIFLPTFSTSGMVVKSGRKLNRRTARNMLSWSHYKFQQHLIQMANRHNVLVVLCNESYTSKTCPECGHVHKQLGGNKKFQCPKCGYTAHRDWNGARNIMLRAL 357          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17617.1 vs. uniprot
Match: A0A1V0S8G3_9VIRU (Transposase n=1 Tax=Catovirus CTV1 TaxID=1977631 RepID=A0A1V0S8G3_9VIRU)

HSP 1 Score: 89.4 bits (220), Expect = 4.070e-17
Identity = 44/132 (33.33%), Postives = 77/132 (58.33%), Query Frame = 0
Query:   86 RRSSAKLKNMIKDMHNRLADWLVGQYDLIIIGKLGIGVMKTKRRG------KRVLQSLSHFSFRRTLLQKATLARKVVKVVSEAYTTKQCNRCGYMNWTIGSSEVFSCKNCKIVCHRDVHSGRGIFIRSMSE 211
            RR + ++KNM+ ++H +  ++LV  YD I+IG + +  + +K         KR+  SLS + F++ L  K  L +K    V+E YT++ C+ CG+ N  +G  ++F CK CK    RDV+  RGI+++ + +
Sbjct:  395 RRLNTRIKNMVNELHWKTINYLVNNYDNILIGDMSVKSIVSKNESTLARITKRIGYSLSLYLFKQRLEYKCKLNKKRYSEVNERYTSRMCSVCGWYNEKLGGDKIFECKECKRTIDRDVNGARGIYLKHLQK 526          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17617.1 vs. uniprot
Match: A0A349JKJ7_9CYAN (Transposase n=3 Tax=unclassified Microcoleaceae TaxID=2053578 RepID=A0A349JKJ7_9CYAN)

HSP 1 Score: 87.0 bits (214), Expect = 4.070e-17
Identity = 59/210 (28.10%), Postives = 105/210 (50.00%), Query Frame = 0
Query:   15 TPVDIKTSRVCSLDMGERTFGTLYDPDGTIAFLGTDANTKVKNRLRVIYQKRNGLKTKLSYNK-------RLRVLNACRRSSAKLKNMIKDMHNRLADWLVGQYDLIIIGKLGIGVMKTKRRGK------RVLQSLSHFSFRRTLLQKATLARKVVKVVSEAYTTKQCNRCGYMNWTIGSSEVFSCKNCKIVCHRDVHSGRGIFIRSMSE 211
            TP   ++  V +LD G RTF T +D    +     D       R+  + +  + L +++  NK       R R+  A      K+KN++ ++HN+ A++LV +Y LI +       M  K + K      R + +LSH+ F++TL  +AT    VV  V+E YT+K C++CG+++  +  S+ F C  C     RD++    I ++++ +
Sbjct:   36 TPTPTQSDLVIALDPGVRTFMTGFDGQNVLELGRGDIG-----RIYRLARHLDKLMSRIGLNKGGQFKQLRYRMRKAASAIRIKIKNLVSELHNKTANYLVSKYKLIFLPTFETQQMVNKGKRKLTTKTARAMVTLSHYRFKQTLKHQATKYGCVVVDVTEEYTSKTCSKCGHVHRKLSGSKTFKCPECGHTLDRDLNGAFNILLKALRD 240          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17617.1 vs. uniprot
Match: K9TEL7_9CYAN (Transposase, IS605 OrfB family, central region n=1 Tax=Oscillatoria acuminata PCC 6304 TaxID=56110 RepID=K9TEL7_9CYAN)

HSP 1 Score: 88.2 bits (217), Expect = 1.120e-16
Identity = 68/204 (33.33%), Postives = 105/204 (51.47%), Query Frame = 0
Query:   16 PVDIKTSRVCSLDMGERTFGTLYDPDGTIAFLGTDANTKVKNRLRVIYQKRNGLKTKLSYNKRLR--VLNACRRSSAKLKNMIKDMHNRLADWLVGQYDLIIIGKLGIGVM------KTKRRGKRVLQSLSHFSFRRTLLQKATLARKVVKVV--SEAYTTKQCNRCGYMNWTIGSSEVFSCKNCKIVCHRDVHSGRGIFIRSM 209
            P   +  RV +LD G RTF T YD + TI  +G     ++      + Q  +  K  LS NKR R  +  A  R   K++N++KD+HN+ A +LV  Y LI++       M      K + R  R + + SH+ F + L QKA  AR  V VV  +E++T+K C  CG+++  +G ++ F C  C     RD +  R I +R++
Sbjct:  414 PTPTQEERVIALDPGVRTFLTGYDGE-TILEIGQKDIGRINRLCTHLDQLMS--KIALSSNKRQRYKMRKAATRMRCKIQNLVKDLHNKSASFLVNNYKLILLPTFETSQMVERHKRKIRSRTARNMLTWSHYKFAKHLEQKA--ARNGVMVVRCNESFTSKTCPECGHIHEKLGGNKTFRCPECGYEAPRDWNGARNILLRAL 612          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4M4_9PHAE1.600e-3642.08Resolvase/invertase-type recombinase catalytic dom... [more]
A0A845YEN4_9CYAN4.030e-1930.41Transposase n=2 Tax=Symploca sp. SIO2G7 TaxID=2607... [more]
A0A6P0HQ39_9CYAN8.400e-1928.00Transposase n=3 Tax=unclassified Okeania TaxID=263... [more]
A0A6M0BGJ5_9CYAN1.450e-1834.17Transposase n=10 Tax=unclassified Moorena TaxID=26... [more]
A0A6P0XDS6_9CYAN9.100e-1827.00Transposase (Fragment) n=1 Tax=Okeania sp. SIO2D1 ... [more]
UPI001F5D89112.040e-1731.19transposase n=2 Tax=Phormidium TaxID=1198 RepID=UP... [more]
A0A6P0U237_9CYAN2.870e-1728.14Transposase n=6 Tax=unclassified Okeania TaxID=263... [more]
A0A1V0S8G3_9VIRU4.070e-1733.33Transposase n=1 Tax=Catovirus CTV1 TaxID=1977631 R... [more]
A0A349JKJ7_9CYAN4.070e-1728.10Transposase n=3 Tax=unclassified Microcoleaceae Ta... [more]
K9TEL7_9CYAN1.120e-1633.33Transposase, IS605 OrfB family, central region n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010095Transposase IS605, OrfB, C-terminalPFAMPF07282OrfB_Zn_ribboncoord: 140..201
e-value: 8.0E-13
score: 48.1
IPR001959Probable transposase, IS891/IS1136/IS1341PFAMPF01385OrfB_IS605coord: 20..125
e-value: 3.3E-7
score: 30.5
NoneNo IPR availableSUPERFAMILY57889Cysteine-rich domaincoord: 164..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig96contigE-siliculosus-1a_M_contig96:559172..559807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig96.17617.1mRNA_E-siliculosus-1a_M_contig96.17617.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig96 559172..559807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig96.17617.1 ID=prot_E-siliculosus-1a_M_contig96.17617.1|Name=mRNA_E-siliculosus-1a_M_contig96.17617.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=212bp
FYATITENRAFLPATPVDIKTSRVCSLDMGERTFGTLYDPDGTIAFLGTD
ANTKVKNRLRVIYQKRNGLKTKLSYNKRLRVLNACRRSSAKLKNMIKDMH
NRLADWLVGQYDLIIIGKLGIGVMKTKRRGKRVLQSLSHFSFRRTLLQKA
TLARKVVKVVSEAYTTKQCNRCGYMNWTIGSSEVFSCKNCKIVCHRDVHS
GRGIFIRSMSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001959Transposase_2
IPR010095Transposase_IS605_OrfB_C