prot_E-siliculosus-1a_M_contig96.17578.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig96.17578.1
Unique Nameprot_E-siliculosus-1a_M_contig96.17578.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length401
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17578.1 vs. uniprot
Match: A0A6H5KKZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ7_9PHAE)

HSP 1 Score: 607 bits (1566), Expect = 1.910e-216
Identity = 318/345 (92.17%), Postives = 323/345 (93.62%), Query Frame = 0 
Query:   56 QEASDTLDLIDQLLWALGPADSGEAGFVFFDLDETLITRDTCLVDGLGSTSALMARLEAKLGPSSETLRVIRQEMERDYYNADPRLVDPLLARVIRALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLHNARRAVSEHVGAKTAGDAARGGLSEPGGVKVGDVESSGGRTALAGSLSPKRPRKCVLVDNTSKKCERAAETFARHAAAAGGGLELHTLHFTEAENMVDSPEALRQLRIILARLKERGLIGVDLIAEDILVTPVGGVRRGAGDKVKAAAAAACGPDGKGDRGG 400
            +EASDTLDLIDQLLWALGPADSGE GFVFFDLDETLITRDTCLVDGLGSTSALMARLEAKLGPSSETLRVIRQEMERDYYNAD RLVDPLLARVIR+LKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLL          VG KTAGDAARGGLSEPGGVKVGD ESSGGRTALAGSLSP+RPRKCVLVDNTSKKCERA ETFARHAA AGGGLELHTLHFTEAENMVDSPEALRQLR+ILARL+ERGLIGVDLIAEDILVTPVGGVRRGAGDKVKAAA  AC PDGK  R G
Sbjct:   54 REASDTLDLIDQLLWALGPADSGETGFVFFDLDETLITRDTCLVDGLGSTSALMARLEAKLGPSSETLRVIRQEMERDYYNADLRLVDPLLARVIRSLKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLXXXXXXXXXXVGEKTAGDAARGGLSEPGGVKVGDGESSGGRTALAGSLSPRRPRKCVLVDNTSKKCERAVETFARHAAMAGGGLELHTLHFTEAENMVDSPEALRQLRVILARLQERGLIGVDLIAEDILVTPVGGVRRGAGDKVKAAAEVACVPDGKSGRSG 398
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17578.1 vs. uniprot
Match: D8LQ97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ97_ECTSI)

HSP 1 Score: 507 bits (1305), Expect = 9.580e-179
Identity = 264/271 (97.42%), Postives = 265/271 (97.79%), Query Frame = 0 
Query:  130 MERDYYNADPRLVDPLLARVIRALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLHNARRAVSEHVGAKTAGDAARGGLSEPGGVKVGDVESSGGRTALAGSLSPKRPRKCVLVDNTSKKCERAAETFARHAAAAGGGLELHTLHFTEAENMVDSPEALRQLRIILARLKERGLIGVDLIAEDILVTPVGGVRRGAGDKVKAAAAAACGPDGKGDRGG 400
            MERDYYNADP+LVDPLLARVIRALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLHNARRAVSEHVGAKTAGDAARGGLSEPGGVKVGD ESSGGRTALAGSLSPKRPRKCVLVDNTSKKCERAAETFARHAAAAGGGLELHTLHFTEAENMVDSPEALRQLRIILARLKERGLIGVDLIAEDILVTPVGGVRRGAGDKVKAAAA AC PDG   RGG
Sbjct:    1 MERDYYNADPKLVDPLLARVIRALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLHNARRAVSEHVGAKTAGDAARGGLSEPGGVKVGDGESSGGRTALAGSLSPKRPRKCVLVDNTSKKCERAAETFARHAAAAGGGLELHTLHFTEAENMVDSPEALRQLRIILARLKERGLIGVDLIAEDILVTPVGGVRRGAGDKVKAAAATACVPDGNRGRGG 271
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17578.1 vs. uniprot
Match: A0A835YVM2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM2_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.070e-36
Identity = 79/153 (51.63%), Postives = 103/153 (67.32%), Query Frame = 0 
Query:   59 SDTLDLIDQLLWALGPADSGEAGFVFFDLDETLITRDTCLVDGLGSTSALMARLEAKLGPS-------SETLRVIRQEMERDYYNADPRLVDPLLARVIRALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMV 204
            +DT DLID LL  +G A   +  ++FFD+DETL+TRDTCLV G   T+ L+ RL  +L  +       SE +R I+ EMER+YY++D +LVDPLLAR++R LK+QGH VFGLTSN     H+   +  LA+YKIRFS P +RGELP    L V
Sbjct:   36 ADTDDLIDMLL-TVGTA---KPAWIFFDIDETLVTRDTCLVHGFQHTTYLLERLRTRLAETGSSGARASEVVRKIQAEMEREYYDSDIKLVDPLLARLVRGLKVQGHHVFGLTSNEPFSEHSITTVAALAQYKIRFSDPWIRGELPLCALLFV 184
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KKZ7_9PHAE1.910e-21692.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ97_ECTSI9.580e-17997.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVM2_9STRA1.070e-3651.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022565Protein of unknown function DUF2608PFAMPF11019DUF2608coord: 82..197
e-value: 7.2E-5
score: 22.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig96contigE-siliculosus-1a_M_contig96:221145..223887 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig96.17578.1mRNA_E-siliculosus-1a_M_contig96.17578.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig96 220281..223914 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig96.17578.1 ID=prot_E-siliculosus-1a_M_contig96.17578.1|Name=mRNA_E-siliculosus-1a_M_contig96.17578.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=401bp
MQKKVREKTLSQRRKTTAKSKKNRNPAHAYRNHLFAAMFHPRAILLYNLT
FHPFHQEASDTLDLIDQLLWALGPADSGEAGFVFFDLDETLITRDTCLVD
GLGSTSALMARLEAKLGPSSETLRVIRQEMERDYYNADPRLVDPLLARVI
RALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSG
ALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLHNARRAVSEHVGA
KTAGDAARGGLSEPGGVKVGDVESSGGRTALAGSLSPKRPRKCVLVDNTS
KKCERAAETFARHAAAAGGGLELHTLHFTEAENMVDSPEALRQLRIILAR
LKERGLIGVDLIAEDILVTPVGGVRRGAGDKVKAAAAAACGPDGKGDRGG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022565DUF2608