prot_E-siliculosus-1a_M_contig95.17521.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17521.1
Unique Nameprot_E-siliculosus-1a_M_contig95.17521.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length264
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17521.1 vs. uniprot
Match: A0A6H5KTQ0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTQ0_9PHAE)

HSP 1 Score: 357 bits (916), Expect = 3.010e-122
Identity = 195/208 (93.75%), Postives = 198/208 (95.19%), Query Frame = 0 
Query:    1 MKLSVFLVLLPSVSAFVSPKPVVLNNHLQRQXXXXXXXX--SSTPTAVGAWKQANGEGPWSVATLWRDMVGSAMNKAKVDSTAAEAYHELKKKVLVKKERQSLEGQLCSLIRIEGNSMSCKKQDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSSAACEGNGGGRGGDRLTTIEDISYVSENYRLSHSGEQDDLRVYKRVSPP 206
            MKLSVFLVLLPSVSAFVSPKPVVLNNHLQR XXXXXXXX  SSTPTAVGAWKQANGEGPWS+ATLWRD+VG AMNKAKVDSTAAE YHELKKKVLVKKERQSLEGQL SLIRIEGNSMSCKKQDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYS AACEG GGGRGGDRL TIE ISYVSENYRLSHSGE+DDLRVYKRVSPP
Sbjct:    1 MKLSVFLVLLPSVSAFVSPKPVVLNNHLQRXXXXXXXXXXXSSTPTAVGAWKQANGEGPWSIATLWRDVVGPAMNKAKVDSTAAEVYHELKKKVLVKKERQSLEGQLSSLIRIEGNSMSCKKQDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSRAACEGKGGGRGGDRLPTIEVISYVSENYRLSHSGEEDDLRVYKRVSPP 208
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17521.1 vs. uniprot
Match: D7G1W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W5_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 2.090e-60
Identity = 137/149 (91.95%), Postives = 140/149 (93.96%), Query Frame = 0 
Query:  116 MSCKKQDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSSAACEGNGGGRGGDRLTTIEDISYVSENYRLSHSGEQDDLRVYKRVSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGG-RRGVSKLPLRRRTFFGFLRRQ 263
            +  +K+DCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSSAACEGNGGGRGGDRLTTIEDISYVSENYRLSHSGEQDDLRVYKRVSPP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     RRGVSKLPLRRRTFFGFLRRQ
Sbjct:    5 LDSQKRDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSSAACEGNGGGRGGDRLTTIEDISYVSENYRLSHSGEQDDLRVYKRVSPPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGVSKLPLRRRTFFGFLRRQ 153
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig95.17521.1 vs. uniprot
Match: D7G1W6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W6_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 5.700e-37
Identity = 75/96 (78.12%), Postives = 79/96 (82.29%), Query Frame = 0 
Query:    1 MKLSVFLVLLPSVSAFVSPKPVVLNNHLQRQXXXXXXXXSSTPTAVGAWKQANGEGPWSVATLWRDMVGSAMNKAKVDSTAAEAYHELKKKVLVKK 96
            MKLSVFLVLLPSVSAFVSP+PVVLNNHLQRQ        SSTPTAVGAWKQANGEGPWSVATLWRD+VGSAMNKAKVDSTA +     +KK   KK
Sbjct:    1 MKLSVFLVLLPSVSAFVSPRPVVLNNHLQRQQQQQR---SSTPTAVGAWKQANGEGPWSVATLWRDVVGSAMNKAKVDSTARKPTTNSRKKGWSKK 93
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KTQ0_9PHAE3.010e-12293.75Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G1W5_ECTSI2.090e-6091.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1W6_ECTSI5.700e-3778.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..144
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..263
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.847

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:510693..514325 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17521.1mRNA_E-siliculosus-1a_M_contig95.17521.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig95 509172..514398 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig95.17521.1 ID=prot_E-siliculosus-1a_M_contig95.17521.1|Name=mRNA_E-siliculosus-1a_M_contig95.17521.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=264bp
MKLSVFLVLLPSVSAFVSPKPVVLNNHLQRQQRQQRQQRSSTPTAVGAWK
QANGEGPWSVATLWRDMVGSAMNKAKVDSTAAEAYHELKKKVLVKKERQS
LEGQLCSLIRIEGNSMSCKKQDCVRRLATELESLQDNAAEFGSQKSGLTG
SWKLIYSSAACEGNGGGRGGDRLTTIEDISYVSENYRLSHSGEQDDLRVY
KRVSPPPARGDDTSAAMVGGAGGRKKATGRAAAAAAAVGAGGRRGVSKLP
LRRRTFFGFLRRQ*
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