prot_E-siliculosus-1a_M_contig95.17520.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17520.1
Unique Nameprot_E-siliculosus-1a_M_contig95.17520.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length853
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17520.1 vs. uniprot
Match: A0A6H5KU59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU59_9PHAE)

HSP 1 Score: 769 bits (1986), Expect = 7.460e-268
Identity = 596/724 (82.32%), Postives = 606/724 (83.70%), Query Frame = 0
Query:  134 GAPPATAVDGNEVHSVSDIESGRVVISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVLALAGPENYEQFPQPFSCLDVPVRPYERSASRSSGGXXXXXXXXXFGDTEAGGGLERQDDGGFMSNGGGQEGEEFGGGREEGWVRPEIDVADLVMDNNEFYTPHGKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSNRSDSCRRPRFDTAADEGSVARGGLTPAADVDDNDRPSFPRKDDRLEAAAKAGGXXXXXXXXXSTGLSAGLFRDETPPRPPGHGVTTPGKDSMGVWRPSAGNNPTNFRDNRAAGGGLGAGPQAAAAAPVASTPVPPTPRSLPGLLSMSFDNNMMVEEGLRQSQPRLSPPSVLERSQERRASEQHKAWQQQXXXXXXXXXXXXXXXXXXXXXXXXXXSSGSHDFDDCFYDGGANDDRVGRHQQRIAARE-RGAGDCTLRPFLSYASIMSSCGGGGSSGEFAPGDSPTLPSTLNSNRNDAATAPPTEGANNGSXXXXXXXX----ATGKDEAETPPPLQADNFDTGRLTATVGWEGSPKSRGGVGDGVGDKARVVDRANFDTAPFFACGDKAPTTVSRPRGAGARGGAGMTGAPTGLFDSTKKWFDSVGKGVVEGGGRREVVGAVDNGTNAQLGSPLEGTE 852
            GAPPATAVDGNEVHSVSDIESGRVV+SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +LALAGPENYE FPQPFS LDVPVRPY RSASRSS  XXXXXXXXXFGDTEAGGGLERQDDGGF+S      GEE GGGREEGWVRPEIDVADLVMDNNEFYTPHGKSGXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSNRSDSCRRPRFDTAADEGSVARGGL   ADVDDN  PS PRKD +LEAAAKA  XXXXXXXXX  GLSAGLFRDETPP PPG GVTTPGKDS GVWR SAGNNPTN RDNRAAGGGL AG QAAAA PVASTP+PPTPRSLPGLLSMSFDNNMMVEEGLRQSQPRLSPPSVL RSQE             XXXXXXXX                  SSGSHDFDDCFYDGGANDDRVGRHQQRIAA+E RGAGDCTLRPFLSYASIMSSCGGGGSSGE APGDSPTLPS LN                   XXXXXXXX    ATGKDEA+TPP LQAD+FDTGRLT TVGWEGSPKSRGGVGDGV  KARVVDRANFDTAP  ACGDKA TTVSRP GAGARGGAG+TGAPT LFDSTKKWF S+GKG VEGGGRREVVG VDNG NAQLGS LEGTE
Sbjct:    3 GAPPATAVDGNEVHSVSDIESGRVVVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLALAGPENYEHFPQPFSGLDVPVRPYARSASRSSXXXXXXXXXXXFGDTEAGGGLERQDDGGFVSXXXXXXGEELGGGREEGWVRPEIDVADLVMDNNEFYTPHGKSGXXXXXXXXXXXXXXXXXXXXXXXXXHTISTNKALRDAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSNRSDSCRRPRFDTAADEGSVARGGLNSVADVDDNGHPSLPRKDGKLEAAAKAXXXXXXXXXXXXXGLSAGLFRDETPPLPPGGGVTTPGKDSTGVWRSSAGNNPTNVRDNRAAGGGLSAGSQAAAA-PVASTPLPPTPRSLPGLLSMSFDNNMMVEEGLRQSQPRLSPPSVLRRSQEXXXXXXXXXXXXXXXXXXXXXLCSSSVGSSGVSTITSGSSSGSHDFDDCFYDGGANDDRVGRHQQRIAAKEERGAGDCTLRPFLSYASIMSSCGGGGSSGELAPGDSPTLPSALNXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGATGKDEAKTPPSLQADSFDTGRLTDTVGWEGSPKSRGGVGDGVSGKARVVDRANFDTAPLLACGDKASTTVSRPGGAGARGGAGVTGAPTELFDSTKKWFGSMGKGDVEGGGRREVVGVVDNGGNAQLGSQLEGTE 725          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17520.1 vs. uniprot
Match: D7G1W4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W4_ECTSI)

HSP 1 Score: 644 bits (1661), Expect = 2.370e-218
Identity = 572/855 (66.90%), Postives = 579/855 (67.72%), Query Frame = 0
Query:    1 MEAALATPAPTPDAAAAIDATDQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAEARAESTMTIAAVVDEEATPVSAPXXXXXXXXXXXXXXXXXXXXXXXAEHDGAPPATAVDGNEVHSVSDIESGRVVISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVLALAGPENYEQFPQPFSCLDVPVRPYERSASRSSGGXXXXXXXXXFGDTEAGGGLERQDDGGFMSNGGGQEGEEFGGGREEGWVRPEIDVADLVMDNNEFYTPHGKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSNRSDSCRRPRFDTAADEGSVARGGLTPAADVDDNDRPSFPRKDDRLEAAAKAGGXXXXXXXXXSTGLSAGLFRDETPPRPPGHGVTTPGKDSMGVWRPSAGNNPTNFRDNRAAGGGLGAGPQAAAAAPVASTPVPPTPRSLPGLLSMSFDNNMMVEEGLRQSQPRLSPPSVLERSQERRASEQHKAWQQQXXXXXXXXXXXXXXXXXXXXXXXXXXSSGSHDFDDCFYDGGANDDRVGRHQQRIAARERGAGDCTLRPFLSYASIMSSCGGGGSSGEFAPGDSPTLPSTLNSNRNDAATAPPTEGANNGSXXXXXXXX--ATGKDEAETPPPLQADNFDTGRLTATVGWEGSPKSRGGVGDGVGDKARVVDRANFDTAPFFACGD-KAPTTVSRPRGAGARGGAGMTGAPTGLFDSTKKWFDSVGKGVVEGGGRREVVGAVDNGTNAQLGSPLEGTE 852
            MEA  ATPAPTPDAAAAIDATDQA XXXXXXXXXXX                        XXXXXXXXXXXXXXXX    LAEARAESTMTIAAVVDEEATPVSA       XXXXXXXXXXXXXXX  AEHDGAPPATAVDGNEV SV DIESGRVV+SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVLALAGPENYEQFPQPFSCLDVPVRPYERSASRSS  XXXXXXXXXFGDTEAGGGLERQ DGGFMSNGGGQEGEEFGGGREEGW   +  V  + + + E      K  XXXXXXXXXXXXX                                                        SNRSD CRRPRFDTAADEGSVARGGLTPAADV DND PS PRKD RLEAAAKA  XXXXXXXXX  GLSAGLFRDETP  PPG GVTTPGKDS GVWRPSAGNNP NF  N AAGGGL AGPQAAA APVASTPVPPTP SLPGLLSMSFDNNMMVEEGLRQSQPRLSPPSVLERSQE                                                                                      SIMSSCG                                        XXXXXXXX  ATGKDEAETPPPLQADNFDTGRLT TVGWEGSPKSRGGVGDGV  KARVVDRANFDTAPFFACGD KA TTVSRP GAGARGGAGMTGAPTGLFDSTKKWFDSVGK VVE GG+REVVG VDNG+NAQLGSPLEGTE
Sbjct:   45 MEATSATPAPTPDAAAAIDATDQAPXXXXXXXXXXXDGHWVLALGLGAVVGLLVLGACWCXXXXXXXXXXXXXXXXRAS-LAEARAESTMTIAAVVDEEATPVSAHPPNRPSXXXXXXXXXXXXXXXPPAEHDGAPPATAVDGNEVRSVFDIESGRVVVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVLALAGPENYEQFPQPFSCLDVPVRPYERSASRSSXXXXXXXXXXXFGDTEAGGGLERQADGGFMSNGGGQEGEEFGGGREEGWALRDA-VVIVAVASAEMKALQRKXXXXXXXXXXXXXXX--------------------------------------------------------SNRSDFCRRPRFDTAADEGSVARGGLTPAADVYDNDHPSLPRKDGRLEAAAKAXXXXXXXXXXXXXGLSAGLFRDETPTPPPGGGVTTPGKDSAGVWRPSAGNNPANFWHNGAAGGGLSAGPQAAAVAPVASTPVPPTPMSLPGLLSMSFDNNMMVEEGLRQSQPRLSPPSVLERSQE--------------------------------------------------------------------------------------SIMSSCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGKDEAETPPPLQADNFDTGRLTDTVGWEGSPKSRGGVGDGVSGKARVVDRANFDTAPFFACGDGKASTTVSRPGGAGARGGAGMTGAPTGLFDSTKKWFDSVGKCVVEAGGQREVVGVVDNGSNAQLGSPLEGTE 755          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU59_9PHAE7.460e-26882.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1W4_ECTSI2.370e-21866.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..852
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:500056..504235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17520.1mRNA_E-siliculosus-1a_M_contig95.17520.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig95 499646..504235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig95.17520.1 ID=prot_E-siliculosus-1a_M_contig95.17520.1|Name=mRNA_E-siliculosus-1a_M_contig95.17520.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=853bp
MEAALATPAPTPDAAAAIDATDQAPASSSGGGGGDDGHWALALGLGAAVG
LLVLGVCWCCCYARYRRKTREKSKERASATLAEARAESTMTIAAVVDEEA
TPVSAPPPNRPSSSGGGEDDDLPPAAVPPAEHDGAPPATAVDGNEVHSVS
DIESGRVVISSAAAAAPASSSSVPATFAPAATAAGGGGGTSASGGVVAPS
SSPTAAGASSSSSVLSSAAVLALAGPENYEQFPQPFSCLDVPVRPYERSA
SRSSGGAGAGGSGSGFGDTEAGGGLERQDDGGFMSNGGGQEGEEFGGGRE
EGWVRPEIDVADLVMDNNEFYTPHGKSGGGGGDYNNDNNNNGGYDDDSST
YSSHTITTNKALRDAVVIVAVASAEMRALQRKNSCSGGGGSSGGGNGSNR
SDSCRRPRFDTAADEGSVARGGLTPAADVDDNDRPSFPRKDDRLEAAAKA
GGAAAAAGASSSTGLSAGLFRDETPPRPPGHGVTTPGKDSMGVWRPSAGN
NPTNFRDNRAAGGGLGAGPQAAAAAPVASTPVPPTPRSLPGLLSMSFDNN
MMVEEGLRQSQPRLSPPSVLERSQERRASEQHKAWQQQQQQRLRRLRSSS
VGSSGVSTITSGSSSSGSHDFDDCFYDGGANDDRVGRHQQRIAARERGAG
DCTLRPFLSYASIMSSCGGGGSSGEFAPGDSPTLPSTLNSNRNDAATAPP
TEGANNGSGGGGGAGAATGKDEAETPPPLQADNFDTGRLTATVGWEGSPK
SRGGVGDGVGDKARVVDRANFDTAPFFACGDKAPTTVSRPRGAGARGGAG
MTGAPTGLFDSTKKWFDSVGKGVVEGGGRREVVGAVDNGTNAQLGSPLEG
TE*
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