mRNA_E-siliculosus-1a_M_contig95.17505.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17505.1
Unique NamemRNA_E-siliculosus-1a_M_contig95.17505.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17505.1 vs. uniprot
Match: D7G1U8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U8_ECTSI)

HSP 1 Score: 647 bits (1670), Expect = 9.610e-232
Identity = 355/444 (79.95%), Postives = 364/444 (81.98%), Query Frame = 1 
Query:    1 MVDTNGATAGNTGARRPNAGSGGNGGASQAKPRHAAVAKPISNSKNVTAGGAKVTTVAGEHHSSSKEPENVTIQADPATSLGLSFAVGGVVRQASPSYPLY-----EVAPKGQVAALGVREGWRLTNIGKTDFTVTATSTPKHILEALAAARKRGTTYTLGFSTGGVNEAPNGVVRAEEQSTVEACDGSRVDNAVSETASGEAATAVPASGGETGNSDQVFVEGKELEEEDRKKGTSAGVEIGEDGETKETEGKCEGQVCEGKDVPSCKAETGRGDGEVTLKYEMYDEKFPIKDGCISAAEIDETYCLSFVMPNCTLHLGPLGPADRYARENGGELVPYLEENPSGTFHGLEDGEVYWVYVSRDEEEEKQDRERMKQARARFSVVQGMKQDVPEDGELVNRKDDGRNGLESCSCVYGNPCVDEYGCKDWHSRYAVAKANGWKGF 1317
            MVDTNGATAGN   RRPNAGSGGNGGASQAKPRHAAVAKPISNSK                                            +V+    S+P       +VAPKGQVAALGVREGWRLTNIGK DFTVTATSTPKHILEALAAARKRGTTYTLGFSTGG +EAPNG VRAEEQS VEACDGSRVDNAVSETA GEAATA PASGGETGNSDQV VEGKELE+ DRKKG SAGVEIGE+GETKETEGK EGQV  GKDVPSCKAETGRGDGEVTL YEMYDEKFPIKDG ISAAEIDETYCLSFVMPNCTLHLGPLGPADRYAREN GELVPYLEENPSGTFHGLEDGEVYWVYVSRD+EEEKQDRERMKQ      VVQGMKQD+PEDGE VNRKDDGRNGLESCSCVYGNPCVDEYGCKDWHSRYAVAKANGWKGF
Sbjct:    1 MVDTNGATAGN---RRPNAGSGGNGGASQAKPRHAAVAKPISNSK--------------------------------------------LVKPLCHSWPALHLLHIQVAPKGQVAALGVREGWRLTNIGKNDFTVTATSTPKHILEALAAARKRGTTYTLGFSTGGADEAPNGAVRAEEQSIVEACDGSRVDNAVSETAGGEAATAGPASGGETGNSDQVCVEGKELEQ-DRKKGASAGVEIGENGETKETEGKGEGQVFGGKDVPSCKAETGRGDGEVTLMYEMYDEKFPIKDGSISAAEIDETYCLSFVMPNCTLHLGPLGPADRYARENEGELVPYLEENPSGTFHGLEDGEVYWVYVSRDDEEEKQDRERMKQ------VVQGMKQDLPEDGEFVNRKDDGRNGLESCSCVYGNPCVDEYGCKDWHSRYAVAKANGWKGF 390
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17505.1 vs. uniprot
Match: A0A6H5JDM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDM1_9PHAE)

HSP 1 Score: 455 bits (1171), Expect = 1.120e-156
Identity = 253/347 (72.91%), Postives = 262/347 (75.50%), Query Frame = 1 
Query:  283 SPSYPLYEVAPKGQVAALGVREGWRLTNIGK-TDFTVTATSTPKHILEALAAARKRGTTYTLGFSTGGVNEAPNGVVRAEEQSTVEACDGSRVDNAVSETASGEAATAVPASGGETGNSDQVFVEGKELEEEDRKKGTSAGVEIGEDGETKETEGKCEGQVCEGKDVPSCKAETGR-GDGEVTLKYEMYDEKFPIKDGCISAAEIDETYCLSFVMPNCTLHLGPLGPADRYARENGGELVPYLEENPSGTFHGLEDGEVYWVYVSRDEEEEKQDRERMKQARARFSVVQGMKQDVPEDGELVNRKDDGRNGLESCSCVYGNPCVDEYGCKDWHSRYAVAKANGWKGF 1317
            +P   + +VAPKGQVAALGVREGWRLTNIGK TDFTVTA STPK ILEALAAARKRGTTYTLGFSTGG  EAPNGVV  EEQS VEA DGSRVD AVSE                 GNSD V VEGKE +EEDRKKG SAGVEIG+ GETKETEG  EGQV EGKD PS KAETGR GDGEVTL YEMYDE FPIK+GCISAAEIDETYCLSFVMPNCTLHLGPLGPADRYAREN GELVPYLE    GT                                    VVQGMK+D+PEDGELVNRKDDGRNGLESCSCVYGNPCVDEYGCK+WHSRYAVAKANGWKGF
Sbjct:   29 TPGAHVNKVAPKGQVAALGVREGWRLTNIGKKTDFTVTAMSTPKRILEALAAARKRGTTYTLGFSTGGAYEAPNGVVGTEEQSDVEARDGSRVDTAVSEXXXXXXXXXXXXXXXXXGNSDGVRVEGKE-QEEDRKKGASAGVEIGDGGETKETEGNGEGQVFEGKDAPSSKAETGRRGDGEVTLMYEMYDENFPIKNGCISAAEIDETYCLSFVMPNCTLHLGPLGPADRYARENEGELVPYLEALVHGT-----------------------------------QVVQGMKRDLPEDGELVNRKDDGRNGLESCSCVYGNPCVDEYGCKNWHSRYAVAKANGWKGF 339
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17505.1 vs. uniprot
Match: A0A3R6VPD3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VPD3_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.400e-49
Identity = 87/172 (50.58%), Postives = 113/172 (65.70%), Query Frame = 1 
Query:  805 RGDGEVTLKYEMYDEKFPIKDGCISAAEIDETYCLSFVMPNCTLHLGPLGPADRYARENGGELVP-YLEENPSGTFHGLEDGEVYWVYVSRDEEEEKQDRERMKQARARFSVVQGMKQDVPEDGELVNRKDDGRNGLESCSCVYGNPCVDEYGCKDWHSRYAVAKANGWKGF 1317
            R +G V LKYEMY E+F I +G  +A  +DE YCLSFVMP+C +HL    P  + A+E+       Y+ E+P+GTFHGLE G+ Y+VY+ ++ E+  QD+ +M+   A     Q  K D         +KDDGR G ESCSC+ GNPCVDEYGCKDWH+RYA+A  NGWKGF
Sbjct:   82 RQNGHVVLKYEMYSEQFEIANGSTTATVVDEAYCLSFVMPHCRIHLSEWDPPTKVAKESQSATNSVYVLEDPAGTFHGLESGKTYYVYIEQEAEQLAQDQAKMRAIAATMDGAQPSKAD---------KKDDGR-GFESCSCIEGNPCVDEYGCKDWHNRYAIAMKNGWKGF 243
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17505.1 vs. uniprot
Match: A0A024U0G6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0G6_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.770e-48
Identity = 87/172 (50.58%), Postives = 113/172 (65.70%), Query Frame = 1 
Query:  805 RGDGEVTLKYEMYDEKFPIKDGCISAAEIDETYCLSFVMPNCTLHLGPLGPADRYARENGGELVP-YLEENPSGTFHGLEDGEVYWVYVSRDEEEEKQDRERMKQARARFSVVQGMKQDVPEDGELVNRKDDGRNGLESCSCVYGNPCVDEYGCKDWHSRYAVAKANGWKGF 1317
            R +G V LKYEMY E+F I +G  +A  +DE YCLSFVMP+C +HL    P  + A+E+       Y+ E+P+GTFHGLE G+ Y+VY+ ++ E+  QD+ +M+   A     Q  K D         +KDDGR G ESCSC+ GNPCVDEYGCKDWH+RYA+A  NGWKGF
Sbjct:  153 RQNGHVVLKYEMYSEQFEIANGSTTATVVDEAYCLSFVMPHCRIHLSEWDPPTKVAKESQSATNSVYVLEDPAGTFHGLESGKTYYVYIEQEAEQLAQDQAKMRAIAATMDGAQPSKAD---------KKDDGR-GFESCSCIEGNPCVDEYGCKDWHNRYAIAMKNGWKGF 314
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17505.1 vs. uniprot
Match: A0A7S0SXS3_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXS3_9STRA)

HSP 1 Score: 166 bits (421), Expect = 7.610e-46
Identity = 88/172 (51.16%), Postives = 111/172 (64.53%), Query Frame = 1 
Query:  814 GEVTLKYEMYDEKFPIKDGCISAAEIDETYCLSFVMPNCTLHLGPLGPADRYARENGGELVP----YLEENPSGTFHGLEDGEVYWVYVSRDEEEEKQDRERMKQARARFSVVQGMKQDVPEDGELVNRKDDGRNGLESCSCVYGNPCVDEYGCKDWHSRYAVAKANGWKGF 1317
            G V L YE YDE FPI DG  +   IDE Y LSFVMPNC +HL    P  +   E   EL P    Y+EENP+G +HGL   EVY+VY+ +D  + + ++E          V++ +K D     E + +KDDGR  +ESCSC+YGNPCVDEYGCKDW++RYA+AKANGWKGF
Sbjct:   38 GLVKLIYETYDELFPITDGSTTHENIDEVYALSFVMPNCRIHLSKYDPKQKRQLEI--ELKPLNEIYIEENPTGVYHGLIADEVYYVYIEQDSIQLELEKEN------NAKVIEILKND-----EEIIKKDDGRV-IESCSCIYGNPCVDEYGCKDWNNRYAIAKANGWKGF 195
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17505.1 vs. uniprot
Match: A0A485L7F0_9STRA (Aste57867_16892 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7F0_9STRA)

HSP 1 Score: 169 bits (427), Expect = 2.260e-45
Identity = 82/168 (48.81%), Postives = 111/168 (66.07%), Query Frame = 1 
Query:  814 GEVTLKYEMYDEKFPIKDGCISAAEIDETYCLSFVMPNCTLHLGPLGPADRYARENGGELVPYLEENPSGTFHGLEDGEVYWVYVSRDEEEEKQDRERMKQARARFSVVQGMKQDVPEDGELVNRKDDGRNGLESCSCVYGNPCVDEYGCKDWHSRYAVAKANGWKGF 1317
            G+VTLKYEMY E+F I +G + AA ID+ YCLSFVMP C +HL    P  +   E  G+   ++ ENP GT+HGL+    Y+VY+ ++ ++  +D+ RM++  A    ++G  +  P       + DDGR G ESCSCV GNPCVDEYGCKDWH+R+A+A  NGWKGF
Sbjct:  147 GQVTLKYEMYSEQFAIANGSMVAAAIDDAYCLSFVMPQCLIHLSLHDPPTKLELETAGQRNLFVYENPLGTYHGLDADSTYYVYIEQEADQLARDQARMREIAA---TMEGANRGKP------MKMDDGR-GFESCSCVEGNPCVDEYGCKDWHNRFAIATKNGWKGF 304
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17505.1 vs. uniprot
Match: W2RJ32_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2RJ32_PHYPN)

HSP 1 Score: 166 bits (421), Expect = 8.710e-45
Identity = 84/174 (48.28%), Postives = 108/174 (62.07%), Query Frame = 1 
Query:  808 GDGEVTLKYEMYDEKFPIKDGCISAAEIDETYCLSFVMPNCTLHLGPLGPADRYARENGGELVPYLEENPSGTFHGLEDGEVYWVYVSRDEEEEKQDRERMKQARARFSVVQGMKQDVPEDGELVNRK----DDGRNGLESCSCVYGNPCVDEYGCKDWHSRYAVAKANGWKGF 1317
            G+G V L YE YDE FPI+DG  + A IDE YCLSFVMPNC + L      +R+ RE  G     + E+P GT+H LE  + Y+V + ++ ++ ++D+E  K                  DGEL  +K    DDGR G ESCSC+YGNPCVDEYGC+DWHSR+A+A  NGWKGF
Sbjct:  122 GNGMVKLIYESYDELFPIEDGSTTQANIDEIYCLSFVMPNCLVRLSRHPNPERFQREESGIFDSLVREDPRGTYHDLEKDQTYYVIIEQEADQLRRDQEATK---------------ALWDGELQKQKKADKDDGR-GFESCSCIYGNPCVDEYGCRDWHSRFAIATKNGWKGF 279
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17505.1 vs. uniprot
Match: A0A8K1C6C9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6C9_PYTOL)

HSP 1 Score: 167 bits (424), Expect = 1.480e-44
Identity = 87/171 (50.88%), Postives = 107/171 (62.57%), Query Frame = 1 
Query:  805 RGDGEVTLKYEMYDEKFPIKDGCISAAEIDETYCLSFVMPNCTLHLGPLGPADRYARENGGELVPYLEENPSGTFHGLEDGEVYWVYVSRDEEEEKQDRERMKQARARFSVVQGMKQDVPEDGELVNRKDDGRNGLESCSCVYGNPCVDEYGCKDWHSRYAVAKANGWKGF 1317
            RG+G V L YE YDE FPI DG  + A IDE YCLSFVMPNC + L     A+R+ REN G     + E+P G +  L   E Y+V V ++ ++ ++D+E  K   A            PE  +    KDDGR G ESCSC+YGNPCVDEYGCKDWHSR+A+A ANGWKGF
Sbjct:  181 RGNGMVKLIYEQYDELFPIVDGSTTQANIDEVYCLSFVMPNCLVRLSYHPNAERFERENTGTFDSLVREDPRGVYQDLIKDETYYVVVEQEADQLRRDQEATKVKWA------------PEIKQDKLSKDDGR-GFESCSCIYGNPCVDEYGCKDWHSRFAIATANGWKGF 338
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17505.1 vs. uniprot
Match: A0A662YFV4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFV4_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.570e-44
Identity = 84/170 (49.41%), Postives = 106/170 (62.35%), Query Frame = 1 
Query:  808 GDGEVTLKYEMYDEKFPIKDGCISAAEIDETYCLSFVMPNCTLHLGPLGPADRYARENGGELVPYLEENPSGTFHGLEDGEVYWVYVSRDEEEEKQDRERMKQARARFSVVQGMKQDVPEDGELVNRKDDGRNGLESCSCVYGNPCVDEYGCKDWHSRYAVAKANGWKGF 1317
            G G V L YE YDE FPI+DG  + A IDE YCLSFVMPNC + L      +R+ RE  G+    + E+P GT+H LE  +VY+V V +  ++ ++D++  K   A     QG              K+DGR G ESCSC+YGNPCVDEYGC+DWHSR+AVA  NGWKGF
Sbjct:   83 GSGMVKLIYEHYDELFPIEDGSTTQANIDEVYCLSFVMPNCLVRLSRHPNPERFQREESGQFDSLVSEDPRGTYHDLEKDQVYYVVVEQASDQLRRDQDATKARWASEGNDQGHA-----------GKNDGR-GFESCSCIYGNPCVDEYGCRDWHSRFAVATKNGWKGF 240
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig95.17505.1 vs. uniprot
Match: A0A329SR06_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SR06_9STRA)

HSP 1 Score: 166 bits (420), Expect = 4.410e-44
Identity = 86/174 (49.43%), Postives = 106/174 (60.92%), Query Frame = 1 
Query:  808 GDGEVTLKYEMYDEKFPIKDGCISAAEIDETYCLSFVMPNCTLHLGPLGPADRYARENGGELVPYLEENPSGTFHGLEDGEVYWVYVSRDEEEEKQDRERMKQARARFSVVQGMKQDVPEDGELVNRK----DDGRNGLESCSCVYGNPCVDEYGCKDWHSRYAVAKANGWKGF 1317
            G G V L YE YDE FPI+DG  + A IDE YCLSFVMPNC + L      +R+ RE  G     + E P GT+H LE    Y+V V ++ ++ ++D+E  K               V  DGEL  +K    DDGR G E+CSC+YGNPCVDEYGC+DWHSR+AVA  NGWKGF
Sbjct:  171 GTGMVKLIYESYDELFPIEDGSTNQANIDEVYCLSFVMPNCLVRLSRHPNPERFQREESGIFDSLVREGPRGTYHDLEKDHTYYVVVEQEADQLRRDQEATK---------------VLWDGELQKQKKADKDDGR-GFETCSCIYGNPCVDEYGCRDWHSRFAVATKNGWKGF 328
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17505.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U8_ECTSI9.610e-23279.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDM1_9PHAE1.120e-15672.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3R6VPD3_9STRA2.400e-4950.58Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A024U0G6_9STRA1.770e-4850.58Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A7S0SXS3_9STRA7.610e-4651.16Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A485L7F0_9STRA2.260e-4548.81Aste57867_16892 protein n=1 Tax=Aphanomyces stella... [more]
W2RJ32_PHYPN8.710e-4548.28Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A8K1C6C9_PYTOL1.480e-4450.88Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662YFV4_9STRA1.570e-4449.41Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A329SR06_9STRA4.410e-4449.43Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:378993..384236 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1320
Model size1320
Exons6
Ec32 orthologEc-07_004050.1
Ec32 ortholog descriptionconserved unknown protein
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2B80G@1,2S0QQ@2759
Seed eggNOG ortholog2880.D7G1U8
Seed ortholog evalue2.1e-185
Seed ortholog score655.2
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17505.1prot_E-siliculosus-1a_M_contig95.17505.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig95 378993..384236 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936517.7655637-CDS-E-siliculosus-1a_M_contig95:378992..3791271622936517.7655637-CDS-E-siliculosus-1a_M_contig95:378992..379127Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 378993..379127 +
1696251113.6881106-CDS-E-siliculosus-1a_M_contig95:378992..3791271696251113.6881106-CDS-E-siliculosus-1a_M_contig95:378992..379127Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 378993..379127 +
1622936517.7802978-CDS-E-siliculosus-1a_M_contig95:379941..3801121622936517.7802978-CDS-E-siliculosus-1a_M_contig95:379941..380112Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 379942..380112 +
1696251113.6987216-CDS-E-siliculosus-1a_M_contig95:379941..3801121696251113.6987216-CDS-E-siliculosus-1a_M_contig95:379941..380112Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 379942..380112 +
1622936517.7940285-CDS-E-siliculosus-1a_M_contig95:380563..3811211622936517.7940285-CDS-E-siliculosus-1a_M_contig95:380563..381121Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 380564..381121 +
1696251113.7088032-CDS-E-siliculosus-1a_M_contig95:380563..3811211696251113.7088032-CDS-E-siliculosus-1a_M_contig95:380563..381121Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 380564..381121 +
1622936517.812862-CDS-E-siliculosus-1a_M_contig95:381740..3818851622936517.812862-CDS-E-siliculosus-1a_M_contig95:381740..381885Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 381741..381885 +
1696251113.7191966-CDS-E-siliculosus-1a_M_contig95:381740..3818851696251113.7191966-CDS-E-siliculosus-1a_M_contig95:381740..381885Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 381741..381885 +
1622936517.83578-CDS-E-siliculosus-1a_M_contig95:382809..3829341622936517.83578-CDS-E-siliculosus-1a_M_contig95:382809..382934Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 382810..382934 +
1696251113.7293522-CDS-E-siliculosus-1a_M_contig95:382809..3829341696251113.7293522-CDS-E-siliculosus-1a_M_contig95:382809..382934Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 382810..382934 +
1622936517.8543627-CDS-E-siliculosus-1a_M_contig95:384050..3842361622936517.8543627-CDS-E-siliculosus-1a_M_contig95:384050..384236Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 384051..384236 +
1696251113.7480376-CDS-E-siliculosus-1a_M_contig95:384050..3842361696251113.7480376-CDS-E-siliculosus-1a_M_contig95:384050..384236Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 384051..384236 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig95.17505.1

>prot_E-siliculosus-1a_M_contig95.17505.1 ID=prot_E-siliculosus-1a_M_contig95.17505.1|Name=mRNA_E-siliculosus-1a_M_contig95.17505.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=440bp
MVDTNGATAGNTGARRPNAGSGGNGGASQAKPRHAAVAKPISNSKNVTAG
GAKVTTVAGEHHSSSKEPENVTIQADPATSLGLSFAVGGVVRQASPSYPL
YEVAPKGQVAALGVREGWRLTNIGKTDFTVTATSTPKHILEALAAARKRG
TTYTLGFSTGGVNEAPNGVVRAEEQSTVEACDGSRVDNAVSETASGEAAT
AVPASGGETGNSDQVFVEGKELEEEDRKKGTSAGVEIGEDGETKETEGKC
EGQVCEGKDVPSCKAETGRGDGEVTLKYEMYDEKFPIKDGCISAAEIDET
YCLSFVMPNCTLHLGPLGPADRYARENGGELVPYLEENPSGTFHGLEDGE
VYWVYVSRDEEEEKQDRERMKQARARFSVVQGMKQDVPEDGELVNRKDDG
RNGLESCSCVYGNPCVDEYGCKDWHSRYAVAKANGWKGF*
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mRNA from alignment at E-siliculosus-1a_M_contig95:378993..384236+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig95.17505.1 ID=mRNA_E-siliculosus-1a_M_contig95.17505.1|Name=mRNA_E-siliculosus-1a_M_contig95.17505.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5244bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:378993..384236+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGTAGACACCAATGGAGCTACAGCTGGAAATACAGGGGCTCGTCGTCC
AAATGCGGGAAGCGGCGGAAATGGCGGCGCTTCGCAGGCTAAACCAAGAC
ATGCTGCTGTTGCCAAGCCCATCTCCAATTCAAAGGTGAGGCAAAAGGTC
AAAGGCGAGCGATGGCATGGTGGCATCAGTTGGTTAGGCCTCTGTGTCAT
TCGTTGCCTGCTCTGCACCTTCTCCATATACAGGTGAATAGACAAAGGGT
AACTGGTGCACTGCGGGTCACATGTAGTTTGTACTTTAGGCAGTCTGTAG
CTCCGCACACCCGATAGACCGGCCGAGGAAAACGGTCTGGCGTCCCCATG
GACATGTTTTTGGGTCTGCTTCTCTGAAGCCGTTGCGATTGCCGCAGAAT
GACGTGTCGACGACACTTTTTGACATGGAACAATGCGAGCAGGATTACGA
CTCAAGTATTGCAAGAGGCAGCGAATGCACTTGTATGTGAAACTATGCGT
GCTTTTAGGTACGTCCCCACAATACTGAAATATATCCAGTTCATCAATAT
ACACATGCAATTGACTGTGAACATAGTAAAACAAAAATGAAACGAACATA
CCGTTCCCGACATCCTTTCGTATTGGTAGTCGGGAGTTGCGAGGCACCGA
GCTACACAGTAAAGTGTTTTCCGGGGAAAAGTTTTCGGGAACATCTCTAC
TGCAGAGCGTTCGCCGACCGGTGTCGATATTACTGCATATTTGCAGCGCC
CGGGGTGCGGCGCGTCCGCTTCGCTGATTGGCTGGAACTACATAGTTGGA
CAATAGATTGCTTCCACTATTGATGCGGAGCGAAACAAAAACACGATTAA
GTACTGAAACGATAGAGTGGACTGGAGAAATTCACAATCATTTAGCACAC
CATGCAAGACGCATACATCGACGCCCCACCCGCTGGCGCCTCAACAAAGA
ATGTCACAGCTGGGGGCGCGAAGGTCACAACAGTTGCTGGAGAGCACCAC
AGCTCGTCGAAGGAACCAGAAAACGTGACTATCCAGGCGGATCCCGCGAC
TTCTCTTGGACTGTCTTTCGCTGTTGGCGGTGTTGTTCGGCAGGCAAGTC
CAAGCTACCCATTGTATGAAGTGACTGAACATACCGCGTATGTATCTGCA
ATTCGACAGAAGAACCTCTCCAGATAATTAAATGGTTAGATCATTCCCCA
TGGTTCTCTATGAACAAGACCTTCACGTACCCGGCACATAATTACGTTGT
CCCATCCTTGAAACGTTAAACGTTTTAGCAAGGCGTACAGACTCATATAT
ATGTTGAAAAGGCCTGGGCGACGCAGGTGGAGCGGTATGAACGGCGTTAA
GTACTGTGTAGTCCTACGTCAGCCTGACTAACTATGTGGCCAAGAATGAA
CTCAAAGTACGAAACTTTTCGAAGTTTTCGCGTACCGACACGGTGTGAGC
GTGCTCTATGTGACGACATGTAGACACTACATAATGTGTACATAGCGACA
AGCCAAAGACACTGGCCCGCTCTTCCATCTCTCCCGCCCCCTTTTTCACA
CCCGGCGCGCACATGAACAAGGTGGCGCCCAAAGGACAAGTGGCCGCTCT
TGGCGTTCGTGAAGGCTGGCGTTTGACGAACATCGGCAAAACTGATTTTA
CGGTAACGGCGACGTCAACACCAAAGCACATTCTCGAAGCCCTCGCTGCT
GCCCGCAAGAGGGGCACCACGTACACGCTTGGGTTTTCGACAGGGGGTGT
AAATGAGGCGCCGAACGGAGTAGTACGTGCCGAGGAACAATCAACTGTAG
AGGCTTGTGACGGCAGTAGGGTGGACAATGCGGTCAGCGAGACAGCCAGT
GGTGAGGCAGCTACGGCTGTGCCGGCGTCAGGGGGTGAAACAGGAAATAG
TGACCAAGTGTTCGTGGAGGGCAAGGAACTAGAAGAAGAAGACCGGAAAA
AGGGTACCTCTGCCGGCGTGGAGATAGGCGAAGATGGTGAGACGAAGGAG
ACTGAAGGAAAATGTGAAGGACAGGTCTGCGAGGGGAAAGATGTTCCATC
CTGCAAGGCCGAGACGGGAAGAGGCGATGGAGAGGTGACGCTCAAGTACG
AGATGTACGACGAAAAGTTTCCCATCAAGGTACAGAGTAAGTAAGTTGGC
AAGCGTAGACATGTGATGTACGCCCCTCTCTCAGAAAATAAACATATGCC
CATCAAAGTGGAATGAATCAGGCGAGCCTCGATTAAAATGTCCTTCCGAC
CATCAAAACGCTCTAATATTTCAAGGAGAGCTTGCTGCACATCCTTGTGG
CGACGCGCGTTGTGCGCGATCTACAGAGCCTGTCGATATTTTCTTTTATT
TGGGGCTCCCACAACTGTCCCGGTTCAATCACCTGTCAATATTTCATTGG
CAAGGTTTACCATCTGATACTTTGCCTAGAAAAAAAGACCGAACGCAGAC
CTAATGGCTCGCTCAACGTTCGTTCCGCGAACTTTGAATGTACCGGGACA
GAGCTTTTACGAGTTTAAATTCGCGGGCGAAGCCCGCCATTACACGGTGA
AACCCATTCATCTGCGGGCCACACGCTTTCAAAATGTTGCACCTCACTCA
ATGAATCAATGAAGGAAAGGAGACACCGGAGCAGAGGTGCCGTCACCGGG
GCAGCAAAGAAATCAAGTTAAATGGAGACAGCTGATTGGCGGACGCCAAG
TTAAATCTGTCCCGGTGGCTTTTTTTGCTGCCGTTCGTTCTTCAACAGGA
TGGCTGCATCAGTGCCGCCGAAATTGACGAGACCTACTGCCTGAGCTTCG
TGATGCCGAACTGCACACTTCACCTTGGGCCGTTGGGCCCGGCGGACCGA
TATGCTCGAGAAAATGGAGGGGAGCTTGTGCCCTACCTTGAAGGTAAAGG
GCTTCATCTCCTATACGTGGGAACACGCAACGTTAGAATTGTTAGCTGTT
CGTATGTCCTACGTAGTGGAGGACCTTCGTATGACAGGTTTCCGAGAAAA
TAGACCGCTACACACCAGGAAAATTTCCTTGTGTAAGATGTTTCGCTTGA
CGTGTTTCGTTCGAGGGTGCAATCAGCAAAATACCTAATTGTTGTCCATT
CCTAACTGCGTTGTATGAAGGACTTGGAGGTACTTGTACCGGCAAGAGCT
TTCGAAAACGGTGAGGCACCCGGATTCTAACCCATAGCTACGATACCACC
GCCAAGAGTTACATTTTTATTGCATTTTTGTCCATGAAACGCAGGTAAGT
CTCCGAGGCACATACATTTCCGCTGGGCACCGTACGAACCGGTTCCGCCT
GTAGGATGATGGGTTTTGTTGTTGCAAAATCTGTGCACAACCAAGGCAAT
CAAGCCAACGTTCTGTTTGCACCGCCCTTTCGAGCTCCTGCGGCTGCCGG
ACGGTGCAACATCGAGAACCGTTTGCGTTGCCTGCGCGAGACCTTAGAAT
TAATGCAAACAAAAAATTGATGGATTTAGTGGCGTCATCCCCGTTCTTTC
TGTTGCTCCAAGATACAGCTACAGAGTACCTACCGTGACTTTCCCCTCTT
GACTGAAGAGCTTCGATCCGGGGTCTCACAGCAGAATTCCTCTACCACGG
TGGCATATGTCAGCAATTCCTCGACGAGTTCAGTCGTCGTTGCCTCATTG
TATGAATGCACGACACGTTTTTGCAATAGTCTCCCTCTACCTGTACGCCA
TGAAGTTGGGCATAGATCGCGGGGGATTAGCGGGATATGCCAAACTTGAG
GTCGCACTTCCAGCGCCGTCCCTGCCATAACCTCTTCCTCTGTACCACCG
CTGCATGATTCCGCCAGAGAATCCTTCAGGAACTTTTCACGGGCTGGAGG
ACGGGGAGGTTTATTGGGTGTACGTTTCAAGGGACGAAGAGGAGGAGAAG
CAAGACAGAGAGAGAATGAAACAGGCAAGAGCCCGCTTCAGCGTATTTGT
TGCAGCCCTACTACACTGCAGTGACGGTGTAGGTGTACAGTAGATATATG
GCAATACAAAGGTTGGAGGACCTTCGATGAGCTGGATAGACAACACCAGG
TAACCTACACACAGAAAGGCGACCGGGAGAAAGGGCCTGCGCGACAAGCT
CCAGTGAATTTCAAGAATGATTCCATGATGAAGTGCCTGGGTAGAGTGAA
CAGGTGCATGGTTGAGACAAGGATATATCAATGTGTCTATGAAAACGAAC
CCCATCATCGAAGCCAGGCATACGACGGCGTCCACTCGAAAAATACCTAA
CCATGTCGTAAGACGCCCGGCAGTGGAATCAAGACGCGACGACAATGAAG
TAAAATATTTATCGACCTTCCCTGCCATTCCTCAAGTTCAGTTATCTGTG
CATCGAAACCTACTCAAACATCGACGATAAGAATTGTCATAGTTTTTTCT
TTCCCGGAGTATGTTTGGGACTCAAGGTCATGCAGTCGCTGCGCAAAGCC
CAAGGCCCCACCAAAAAGTACAACAGAAAATGAACACCTGACAAGGTAGC
ATTCCGCAGCGCTTGTTAGAAATCGGGGTTCCATTTTCATAATGAGACAC
ACACATTAACATTTACATCATTGTATGTAGCGAATTTCGGATAAGAAATC
AATCAGGATTTTGGAATAACGAATGTTGGGGAAAATAAAAATTGTTTTCG
TGAGAGCACGGAATTGAACGGGACGGTTCGGCAGAAAATTAAAAAAACAG
CTGCTTGGGGCGTCGAAGCAACACACACCTCCCCAGGCGCGGTGCTGTGC
ATTCTGCACCACGTCAAAGCAGGTTGTTGATGAGGATATTGACATATCAT
TGCTCTGTCTTGTGTGTAGTGCTGACCACAGTTTACACGAGCATATGGCT
CTGCATGCACTGTGCAACATAGGAGGAGCCAAGATTTCTTGAAAGGAAAG
GGCAGGCGAGGCAAGACCGAGGATAGCACTATGGTTCCTCGAGGACTTAT
CTTTCTGTTCTCAACCGATTGAAAAGTCACTGGCTCACTCGAATAAACGC
CGCGGCACTTGTGTGAAATGATTCCGACGAGAGACCGAACACCACAACAA
CCAACCAGGTGGTGCAAGGCATGAAGCAAGACGTACCGGAAGATGGCGAA
TTGGTCAACCGGAAAGATGACGGGCGGAACGGTCTCGAGAGTTGCAGTTG
CGTGTATGGTAACCCTTGCGTTGACGAATATGGCTGCAAGGACTGGCATT
CACGCTATGCAGTGGCAAAGGCGAACGGATGGAAGGGCTTCTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:378993..384236+

>mRNA_E-siliculosus-1a_M_contig95.17505.1 ID=mRNA_E-siliculosus-1a_M_contig95.17505.1|Name=mRNA_E-siliculosus-1a_M_contig95.17505.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2640bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:378993..384236+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGTAGACACCAATGGAGCTACAGCTGGAAATACAGGGGCTCGTCGTCC
AAATGCGGGAAGCGGCGGAAATGGCGGCGCTTCGCAGGCTAAACCAAGAC
ATGCTGCTGTTGCCAAGCCCATCTCCAATTCAAAGATGGTAGACACCAAT
GGAGCTACAGCTGGAAATACAGGGGCTCGTCGTCCAAATGCGGGAAGCGG
CGGAAATGGCGGCGCTTCGCAGGCTAAACCAAGACATGCTGCTGTTGCCA
AGCCCATCTCCAATTCAAAGAATGTCACAGCTGGGGGCGCGAAGGTCACA
ACAGTTGCTGGAGAGCACCACAGCTCGTCGAAGGAACCAGAAAACGTGAC
TATCCAGGCGGATCCCGCGACTTCTCTTGGACTGTCTTTCGCTGTTGGCG
GTGTTGTTCGGCAGGCAAGTCCAAGCTACCCATTGTATGAAAATGTCACA
GCTGGGGGCGCGAAGGTCACAACAGTTGCTGGAGAGCACCACAGCTCGTC
GAAGGAACCAGAAAACGTGACTATCCAGGCGGATCCCGCGACTTCTCTTG
GACTGTCTTTCGCTGTTGGCGGTGTTGTTCGGCAGGCAAGTCCAAGCTAC
CCATTGTATGAAGTGGCGCCCAAAGGACAAGTGGCCGCTCTTGGCGTTCG
TGAAGGCTGGCGTTTGACGAACATCGGCAAAACTGATTTTACGGTAACGG
CGACGTCAACACCAAAGCACATTCTCGAAGCCCTCGCTGCTGCCCGCAAG
AGGGGCACCACGTACACGCTTGGGTTTTCGACAGGGGGTGTAAATGAGGC
GCCGAACGGAGTAGTACGTGCCGAGGAACAATCAACTGTAGAGGCTTGTG
ACGGCAGTAGGGTGGACAATGCGGTCAGCGAGACAGCCAGTGGTGAGGCA
GCTACGGCTGTGCCGGCGTCAGGGGGTGAAACAGGAAATAGTGACCAAGT
GTTCGTGGAGGGCAAGGAACTAGAAGAAGAAGACCGGAAAAAGGGTACCT
CTGCCGGCGTGGAGATAGGCGAAGATGGTGAGACGAAGGAGACTGAAGGA
AAATGTGAAGGACAGGTCTGCGAGGGGAAAGATGTTCCATCCTGCAAGGC
CGAGACGGGAAGAGGCGATGGAGAGGTGACGCTCAAGTACGAGATGTACG
ACGAAAAGTTTCCCATCAAGGTGGCGCCCAAAGGACAAGTGGCCGCTCTT
GGCGTTCGTGAAGGCTGGCGTTTGACGAACATCGGCAAAACTGATTTTAC
GGTAACGGCGACGTCAACACCAAAGCACATTCTCGAAGCCCTCGCTGCTG
CCCGCAAGAGGGGCACCACGTACACGCTTGGGTTTTCGACAGGGGGTGTA
AATGAGGCGCCGAACGGAGTAGTACGTGCCGAGGAACAATCAACTGTAGA
GGCTTGTGACGGCAGTAGGGTGGACAATGCGGTCAGCGAGACAGCCAGTG
GTGAGGCAGCTACGGCTGTGCCGGCGTCAGGGGGTGAAACAGGAAATAGT
GACCAAGTGTTCGTGGAGGGCAAGGAACTAGAAGAAGAAGACCGGAAAAA
GGGTACCTCTGCCGGCGTGGAGATAGGCGAAGATGGTGAGACGAAGGAGA
CTGAAGGAAAATGTGAAGGACAGGTCTGCGAGGGGAAAGATGTTCCATCC
TGCAAGGCCGAGACGGGAAGAGGCGATGGAGAGGTGACGCTCAAGTACGA
GATGTACGACGAAAAGTTTCCCATCAAGGATGGCTGCATCAGTGCCGCCG
AAATTGACGAGACCTACTGCCTGAGCTTCGTGATGCCGAACTGCACACTT
CACCTTGGGCCGTTGGGCCCGGCGGACCGATATGCTCGAGAAAATGGAGG
GGAGCTTGTGCCCTACCTTGAAGGATGGCTGCATCAGTGCCGCCGAAATT
GACGAGACCTACTGCCTGAGCTTCGTGATGCCGAACTGCACACTTCACCT
TGGGCCGTTGGGCCCGGCGGACCGATATGCTCGAGAAAATGGAGGGGAGC
TTGTGCCCTACCTTGAAGAGAATCCTTCAGGAACTTTTCACGGGCTGGAG
GACGGGGAGGTTTATTGGGTGTACGTTTCAAGGGACGAAGAGGAGGAGAA
GCAAGACAGAGAGAGAATGAAACAGGCAAGAGCCCGCTTCAGCAGAATCC
TTCAGGAACTTTTCACGGGCTGGAGGACGGGGAGGTTTATTGGGTGTACG
TTTCAAGGGACGAAGAGGAGGAGAAGCAAGACAGAGAGAGAATGAAACAG
GCAAGAGCCCGCTTCAGCGTGGTGCAAGGCATGAAGCAAGACGTACCGGA
AGATGGCGAATTGGTCAACCGGAAAGATGACGGGCGGAACGGTCTCGAGA
GTTGCAGTTGCGTGTATGGTAACCCTTGCGTTGACGAATATGGCTGCAAG
GACTGGCATTCACGCTATGCAGTGGCAAAGGCGAACGGATGGAAGGGCTT
CTAGGTGGTGCAAGGCATGAAGCAAGACGTACCGGAAGATGGCGAATTGG
TCAACCGGAAAGATGACGGGCGGAACGGTCTCGAGAGTTGCAGTTGCGTG
TATGGTAACCCTTGCGTTGACGAATATGGCTGCAAGGACTGGCATTCACG
CTATGCAGTGGCAAAGGCGAACGGATGGAAGGGCTTCTAG
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