mRNA_E-siliculosus-1a_M_contig95.17501.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17501.1
Unique NamemRNA_E-siliculosus-1a_M_contig95.17501.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17501.1 vs. uniprot
Match: D7G1U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U5_ECTSI)

HSP 1 Score: 618 bits (1594), Expect = 1.100e-219
Identity = 303/307 (98.70%), Postives = 305/307 (99.35%), Query Frame = 2
Query:   29 MDADEEETKTMQAVKLPEQALELAFHPHRDVLATGLVNGSVCLHTYSPEGHQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQEMAHSWPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNEDSDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEED 949
            MDADEEETKTMQAVKLPEQALELAFHPHRDVLATGLVNGSVCLHTYSPEGHQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQ+MAH WPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNE+SDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNG RVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEED
Sbjct:    1 MDADEEETKTMQAVKLPEQALELAFHPHRDVLATGLVNGSVCLHTYSPEGHQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQQMAHDWPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNEESDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGRRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEED 307          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17501.1 vs. uniprot
Match: A0A067CE70_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CE70_SAPPC)

HSP 1 Score: 347 bits (889), Expect = 1.220e-113
Identity = 162/292 (55.48%), Postives = 208/292 (71.23%), Query Frame = 2
Query:   74 LPEQALELAFHPHRDVLATGLVNGSVCLHTYSPEGHQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQEMAHSWPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNEDSDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEED 949
            L      L FHP R+++ATGL+NGSV    Y+PEGH   L LSHHQ +CR V+FSEDG  LYTAS D+SI     TG V W +  AH+ PVN++H +S  I  SGDDQG IK+WD R    V +++ + D+IS   TN+  D LLAT GD  L+V+DL++     +    +DELLS++IVK G +VVCG+Q+GVLV + WGTWGD S RF GHP SV+T+L +DEDT+LTGSSDGIIRVV I P+K LGL+GDHEDFPVE ++FS D+  +GSVSH + ++FW  GYLF+ED
Sbjct:   17 LDSDVFTLDFHPQRNIVATGLINGSVQAFAYAPEGHASVLSLSHHQDACRKVMFSEDGNTLYTASTDKSIRAYDTTGGVMWAELNAHAHPVNSMHQISNNIFTSGDDQGCIKMWDVRQHRCVVEWNEHTDYISDMTTNDAKDTLLATGGDGRLSVYDLKKNAFVRKSDELDDELLSVRIVKGGKKVVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVETILKVDEDTILTGSSDGIIRVVQIHPNKLLGLIGDHEDFPVEVLEFSHDRRIVGSVSHSDKVQFWDVGYLFDED 308          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17501.1 vs. uniprot
Match: A0A6G0XX68_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX68_9STRA)

HSP 1 Score: 337 bits (863), Expect = 9.630e-110
Identity = 155/294 (52.72%), Postives = 208/294 (70.75%), Query Frame = 2
Query:   68 VKLPEQALELAFHPHRDVLATGLVNGSVCLHTYSPEGHQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQEMAHSWPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNEDSDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEED 949
            ++LP    +L FHP  +++A G+++G V  + YSPEG+   L L+HHQ +CR V+FSEDG ALYTAS D+SI      G V W +  AH  PVN LH +S  I+ SGDDQG +K+WD R +  V +++ + D+IS   TN+  D LL T GD  L+V+DL++ +   +    +DELLS++I+KNG +VVCG+Q+GVLV + W TWGD S RF GHP SV+T+L +DEDT+LTGSSDGIIRVV I P+K LGL+GDHED PVE ++FS DK  +GSVSH N + FW  GYL++ED
Sbjct:   13 IELPSDVFDLDFHPTGNIVAAGMIDGKVQAYQYSPEGNTSVLSLNHHQDACRIVMFSEDGNALYTASSDKSIRAYDTHGGVLWAELNAHLHPVNQLHRISNNIITSGDDQGCVKMWDVRQRRCVVEWNEHTDYISDMTTNDAKDTLLVTGGDGRLSVYDLKKNKFVQKSDELDDELLSVKIIKNGRKVVCGSQDGVLVIFSWDTWGDMSDRFPGHPDSVETILKVDEDTILTGSSDGIIRVVQIHPNKLLGLIGDHEDMPVEVLKFSHDKRIVGSVSHTNKVHFWDVGYLYDED 306          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17501.1 vs. uniprot
Match: A0A6A3F0F6_9STRA (ANAPC4_WD40 domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F0F6_9STRA)

HSP 1 Score: 337 bits (863), Expect = 1.030e-109
Identity = 157/286 (54.90%), Postives = 204/286 (71.33%), Query Frame = 2
Query:   92 ELAFHPHRDVLATGLVNGSVCLHTYSPEGHQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQEMAHSWPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNEDSDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEED 949
            ++ FHP  D++A G ++G V ++ YS E +   LEL HHQ + R++LFS DG  LYTAS D+SI      G  TW +  AH  PVN LH +S  + ASGDDQG +K+WDTR    +++F  + D+IS FATN   D LLATSGD  L+ +DLR+  L G+    +DELLS+ ++KNG ++VCG+Q+GVLV + WGTWGD S RF GHP SV+ LL +DEDTVLTGSSDGI+RVV + P+K LGL+GDHEDFPVE+++FS DK  IGSVSH N + FW  GYLF+ED
Sbjct:   20 DIDFHPLADIVAVGSIDGIVEVYKYSEEANTKVLELKHHQEAVRALLFSPDGQTLYTASADKSIRAFDTLGNPTWAEMRAHDHPVNRLHELSANVFASGDDQGCVKIWDTRQHRCLSEFKEHTDYISGFATNPAQDHLLATSGDGRLSAYDLRKNVLAGKSDELDDELLSVAVIKNGRKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPESVEALLKVDEDTVLTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVENMKFSHDKKIIGSVSHTNKVHFWDVGYLFDED 305          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17501.1 vs. uniprot
Match: A0A024UWC0_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024UWC0_9STRA)

HSP 1 Score: 333 bits (854), Expect = 1.990e-108
Identity = 154/294 (52.38%), Postives = 207/294 (70.41%), Query Frame = 2
Query:   68 VKLPEQALELAFHPHRDVLATGLVNGSVCLHTYSPEGHQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQEMAHSWPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNEDSDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEED 949
            V LP    +L FHP R+V+A G+++G V  +TY+PEG+   L L+HHQ +CR V F+EDG AL+TAS D+SI      G V W +  AH  PVN LH +S  + ASGDDQG +K+WD R    + +++ + D+IS  ATN+    LL T GD  L+V+DL++ +   +    +DELLS++I+KNG +VVCG+Q+GVLV + W TWGD S RF GHP SV+T+L +DEDT+LTGSSDGIIRVV I P+K LGL+GDHED PVE ++FS DK  +GSVSH N + FW  GYL+++D
Sbjct:   12 VLLPSDVFDLDFHPTRNVVAAGMIDGKVQAYTYTPEGNDCVLSLNHHQDACRVVKFAEDGNALFTASSDKSIRAFDVHGGVLWAELNAHLNPVNHLHTISNNVFASGDDQGCVKMWDVRQHRCIVQWNEHTDYISDMATNDSKSTLLVTGGDGRLSVYDLKKNKFVQKSDELDDELLSVRIIKNGRKVVCGSQDGVLVIFSWDTWGDMSDRFPGHPDSVETILKVDEDTILTGSSDGIIRVVQIHPNKLLGLIGDHEDMPVEVLKFSHDKRIVGSVSHSNKVHFWDVGYLYDDD 305          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17501.1 vs. uniprot
Match: A0A3M6VF45_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF45_9STRA)

HSP 1 Score: 333 bits (854), Expect = 2.590e-108
Identity = 158/289 (54.67%), Postives = 202/289 (69.90%), Query Frame = 2
Query:   83 QALELAFHPHRDVLATGLVNGSVCLHTYSPEGHQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQEMAHSWPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNEDSDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEED 949
            Q  ++ FHP  +++A G ++G V ++ YS E +   LEL +HQ + R++LF+ DG  LYTAS D+SI      G  TW +  AH  PVN LH +S  + ASGDD G IK+WDTR    +A+F  + D+IS FATN   D LLATSGD  L  +DLR+  L G+    +DELLS+ ++KNG ++VCG+QNGVLV + W TWGD S RF GHP SVD LL +DEDTVLTGSSDGI+RVV + P+K LGL+GDHEDFPVE+++FS DK  IGSVSH N + FW  GYLFEED
Sbjct:   17 QVFDIDFHPLTNIVAVGCIDGIVQIYKYSEETNSKVLELKNHQEAVRALLFAPDGQTLYTASADKSIRAFDTLGNPTWAEMRAHDHPVNRLHELSANVFASGDDLGCIKIWDTRQHRCLAEFKEHTDYISGFATNPAQDHLLATSGDGRLTAYDLRKNVLAGKSDELDDELLSVAVIKNGRKIVCGSQNGVLVIFSWDTWGDMSDRFPGHPDSVDALLKVDEDTVLTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVENLKFSYDKKIIGSVSHTNKVHFWDVGYLFEED 305          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17501.1 vs. uniprot
Match: K3WEM9_GLOUD (ANAPC4_WD40 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEM9_GLOUD)

HSP 1 Score: 332 bits (852), Expect = 5.350e-108
Identity = 155/288 (53.82%), Postives = 206/288 (71.53%), Query Frame = 2
Query:   83 QALELAFHPHRDVLATGLVNGSVCLHTYSPEGHQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQEMAHSWPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNEDSDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEE 946
            +  ++ FHP ++++A G ++G V ++ YS E +   LEL HHQ + R+VLF+ DG  LYTAS D+SI      G VTW +  AH   VN +H +S  + +SGDDQG +K+WDTR    +A+F  + DFIS FATN   D LLATSGD  L+V+DLR+  L G+    +DELLS+ ++KNG +VVCG+Q+GVLV + WGTWGD S RF GHP SV+T+L +DEDT+LTGSSDGIIRVV + P+K LGL+GDHEDFPVE ++FS DK  +GSVSH N + FW  GYLF++
Sbjct:   18 EVFDIDFHPTQNIVALGTIDGIVQVYKYSEETNTQVLELKHHQDAVRAVLFNPDGQTLYTASADKSIRAFDTLGNVTWAELRAHDNCVNRMHELSANVFSSGDDQGCVKIWDTRQHRCLAEFKEHTDFISGFATNLAGDHLLATSGDGRLSVYDLRKNVLTGKSDELDDELLSVSVIKNGKKVVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVETVLKVDEDTILTGSSDGIIRVVQVHPNKLLGLIGDHEDFPVEMLKFSHDKRLVGSVSHTNKVHFWDVGYLFDD 305          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17501.1 vs. uniprot
Match: A0A5D6XKA4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKA4_9STRA)

HSP 1 Score: 332 bits (851), Expect = 8.090e-108
Identity = 154/287 (53.66%), Postives = 202/287 (70.38%), Query Frame = 2
Query:   83 QALELAFHPHRDVLATGLVNGSVCLHTYSPEGHQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQEMAHSWPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNEDSDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFE 943
            +  ++ FHP  D++A G ++G V ++ YS E +   LEL HH  + R V+F+ DG  LYTAS D+SI      G V+W +  AH  PVN LH +S+ + +SGDD G +K+WDTR    +A+F  + DFIS FATN   D LLATSGD  L+V+DLR+  L G+    +DELLS+ ++KNG +VVCG+Q+GVLV + WGTWGD S RF GHP SVD +L +DEDT+LTGSSDGIIRVV + P+K LGL+GDHEDFPVE ++FS DK  +GSVSH N + FW  GYLF+
Sbjct:   18 EVFDIDFHPAADIVALGTISGVVQVYKYSEEANTQVLELKHHLDAVRGVIFAPDGQTLYTASADKSIRAFDTLGNVSWAELRAHDHPVNQLHQLSQHVFSSGDDMGCVKIWDTRQHRCLAEFKEHTDFISGFATNPAQDHLLATSGDGRLSVYDLRKNVLAGKSDELDDELLSVAVIKNGKKVVCGSQDGVLVVFSWGTWGDMSDRFPGHPDSVDAMLKIDEDTILTGSSDGIIRVVQLHPNKLLGLIGDHEDFPVEVLKFSHDKKLVGSVSHTNKVHFWDVGYLFD 304          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17501.1 vs. uniprot
Match: A0A0P1A5F6_PLAHL (Transducin family protein wd-40 repeat family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5F6_PLAHL)

HSP 1 Score: 331 bits (849), Expect = 1.210e-107
Identity = 153/289 (52.94%), Postives = 205/289 (70.93%), Query Frame = 2
Query:   83 QALELAFHPHRDVLATGLVNGSVCLHTYSPEGHQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQEMAHSWPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNEDSDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEED 949
            Q  ++ FHP  +++A G ++G V ++ YS E +   LEL +H  + R++LF+ DG  LYTAS D+SI      G+ TW +  AH  PVN LH +SE +  SGDDQG IK+WDTR    +A+F  + D+IS FATN   D LLATSGD  L+ ++LR+  L G+    +DELLS+ ++KNG +VVCG+Q+GVLV + WGTWGD S RF GHP SV+TLL +DEDTVLTGSSDGI+RVV + P+K LGL+GDHED PVE+++FS D+  IGSVSH N + FW  G+LFE++
Sbjct:   17 QVFDIDFHPQTNIVAVGCIDGIVQVYKYSEEANVKILELKNHMEAVRALLFAPDGQTLYTASADKSIRAFDALGKPTWAEMRAHEHPVNRLHELSENVFVSGDDQGCIKIWDTRQHRCLAEFKEHSDYISGFATNPSQDHLLATSGDGRLSAYNLRKNALVGKSDELDDELLSVTVIKNGRKVVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVETLLKVDEDTVLTGSSDGIVRVVQVHPNKLLGLIGDHEDLPVENLKFSHDRKMIGSVSHTNKVHFWDVGFLFEDE 305          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17501.1 vs. uniprot
Match: A0A8K1CJS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJS9_PYTOL)

HSP 1 Score: 330 bits (847), Expect = 2.270e-107
Identity = 154/298 (51.68%), Postives = 206/298 (69.13%), Query Frame = 2
Query:   56 TMQAVKLPEQALELAFHPHRDVLATGLVNGSVCLHTYSPEGHQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQEMAHSWPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNEDSDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEED 949
            T + +    Q  ++ FHP +DV+A G +NG V ++ YS + +   LEL HHQ +CR+++F+ DG  LYTAS D+SI      G  +W +  AH  PVN LH +S  I+ASGDDQG IK+WDTR    V ++  + D+IS FATN   D L+AT GD  L+ +DLR+  L G+    +DELLS+ ++KNG ++VCG+Q+GVLV + WGTWGD S RF GHP SVD +L +DEDTVLTGSSDGI+RVV + P+K LGL+GDHEDFPVE+++ S D+  IGSVSH N + FW   YLF +D
Sbjct:    8 TPEEIHCDAQVFDIDFHPSQDVVALGDINGVVQIYKYSEQANTKVLELKHHQDTCRALVFAPDGQTLYTASTDKSIRAFDAHGNASWAELRAHDAPVNRLHVLSNDIIASGDDQGCIKIWDTRQHRCVVEWKEHTDYISGFATNPAVDHLIATGGDGRLSAYDLRKNVLAGKSDELDDELLSVSVIKNGRKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPESVDAILKVDEDTVLTGSSDGIVRVVQVHPNKLLGLIGDHEDFPVENLKLSHDQKIIGSVSHTNKVHFWDVSYLFNDD 305          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U5_ECTSI1.100e-21998.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A067CE70_SAPPC1.220e-11355.48Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A6G0XX68_9STRA9.630e-11052.72Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6A3F0F6_9STRA1.030e-10954.90ANAPC4_WD40 domain-containing protein n=19 Tax=Phy... [more]
A0A024UWC0_9STRA1.990e-10852.38Uncharacterized protein n=6 Tax=Aphanomyces TaxID=... [more]
A0A3M6VF45_9STRA2.590e-10854.67Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
K3WEM9_GLOUD5.350e-10853.82ANAPC4_WD40 domain-containing protein n=1 Tax=Glob... [more]
A0A5D6XKA4_9STRA8.090e-10853.66Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1A5F6_PLAHL1.210e-10752.94Transducin family protein wd-40 repeat family prot... [more]
A0A8K1CJS9_PYTOL2.270e-10751.68Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:345249..353231 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1281
Model size1309
Exons12
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03016,ko03019,ko03041
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EC3.6.4.13
EggNOG OGsKOG2444@1,KOG2444@2759
EggNOG free text desc.ribosomal large subunit biogenesis
GOsGO:0000003,GO:0000741,GO:0001654,GO:0001889,GO:0002376,GO:0002520,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0006997,GO:0007275,GO:0007389,GO:0007423,GO:0008150,GO:0008152,GO:0009553,GO:0009559,GO:0009561,GO:0009605,GO:0009607,GO:0009617,GO:0009790,GO:0009791,GO:0009793,GO:0009799,GO:0009855,GO:0009888,GO:0009960,GO:0009987,GO:0010154,GO:0010197,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022414,GO:0022613,GO:0030154,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0035295,GO:0040007,GO:0042254,GO:0042273,GO:0042274,GO:0042742,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048229,GO:0048284,GO:0048316,GO:0048513,GO:0048534,GO:0048536,GO:0048538,GO:0048565,GO:0048589,GO:0048608,GO:0048731,GO:0048732,GO:0048794,GO:0048856,GO:0048869,GO:0050829,GO:0050896,GO:0051704,GO:0051707,GO:0055123,GO:0060322,GO:0060465,GO:0061008,GO:0061458,GO:0070013,GO:0071704,GO:0071840,GO:0080186,GO:0090304,GO:0098542,GO:1901360
KEGG ModuleM00393
KEGG Pathwayko03018,map03018
KEGG koko:K12598,ko:K13109
Preferred nameWDR55
Seed eggNOG ortholog2880.D7G1U5
Seed ortholog evalue2.8e-174
Seed ortholog score618.2
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936516.930025-CDS-E-siliculosus-1a_M_contig95:345248..3455141622936516.930025-CDS-E-siliculosus-1a_M_contig95:345248..345514Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 345249..345514 -
1696251113.3484743-CDS-E-siliculosus-1a_M_contig95:345248..3455141696251113.3484743-CDS-E-siliculosus-1a_M_contig95:345248..345514Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 345249..345514 -
1622936516.9480317-CDS-E-siliculosus-1a_M_contig95:346134..3463151622936516.9480317-CDS-E-siliculosus-1a_M_contig95:346134..346315Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 346135..346315 -
1696251113.362268-CDS-E-siliculosus-1a_M_contig95:346134..3463151696251113.362268-CDS-E-siliculosus-1a_M_contig95:346134..346315Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 346135..346315 -
1622936516.9665923-CDS-E-siliculosus-1a_M_contig95:346759..3468351622936516.9665923-CDS-E-siliculosus-1a_M_contig95:346759..346835Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 346760..346835 -
1696251113.3722904-CDS-E-siliculosus-1a_M_contig95:346759..3468351696251113.3722904-CDS-E-siliculosus-1a_M_contig95:346759..346835Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 346760..346835 -
1622936516.991475-CDS-E-siliculosus-1a_M_contig95:347424..3475031622936516.991475-CDS-E-siliculosus-1a_M_contig95:347424..347503Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 347425..347503 -
1696251113.3834667-CDS-E-siliculosus-1a_M_contig95:347424..3475031696251113.3834667-CDS-E-siliculosus-1a_M_contig95:347424..347503Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 347425..347503 -
1622936517.0098524-CDS-E-siliculosus-1a_M_contig95:347739..3478301622936517.0098524-CDS-E-siliculosus-1a_M_contig95:347739..347830Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 347740..347830 -
1696251113.394389-CDS-E-siliculosus-1a_M_contig95:347739..3478301696251113.394389-CDS-E-siliculosus-1a_M_contig95:347739..347830Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 347740..347830 -
1622936517.0263193-CDS-E-siliculosus-1a_M_contig95:348443..3485431622936517.0263193-CDS-E-siliculosus-1a_M_contig95:348443..348543Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 348444..348543 -
1696251113.4067597-CDS-E-siliculosus-1a_M_contig95:348443..3485431696251113.4067597-CDS-E-siliculosus-1a_M_contig95:348443..348543Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 348444..348543 -
1622936517.066949-CDS-E-siliculosus-1a_M_contig95:349538..3495941622936517.066949-CDS-E-siliculosus-1a_M_contig95:349538..349594Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 349539..349594 -
1696251113.4182007-CDS-E-siliculosus-1a_M_contig95:349538..3495941696251113.4182007-CDS-E-siliculosus-1a_M_contig95:349538..349594Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 349539..349594 -
1622936517.0873477-CDS-E-siliculosus-1a_M_contig95:350184..3502351622936517.0873477-CDS-E-siliculosus-1a_M_contig95:350184..350235Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 350185..350235 -
1696251113.4294333-CDS-E-siliculosus-1a_M_contig95:350184..3502351696251113.4294333-CDS-E-siliculosus-1a_M_contig95:350184..350235Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 350185..350235 -
1622936517.134198-CDS-E-siliculosus-1a_M_contig95:350716..3508181622936517.134198-CDS-E-siliculosus-1a_M_contig95:350716..350818Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 350717..350818 -
1696251113.442822-CDS-E-siliculosus-1a_M_contig95:350716..3508181696251113.442822-CDS-E-siliculosus-1a_M_contig95:350716..350818Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 350717..350818 -
1622936517.1536837-CDS-E-siliculosus-1a_M_contig95:351414..3514701622936517.1536837-CDS-E-siliculosus-1a_M_contig95:351414..351470Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 351415..351470 -
1696251113.4538915-CDS-E-siliculosus-1a_M_contig95:351414..3514701696251113.4538915-CDS-E-siliculosus-1a_M_contig95:351414..351470Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 351415..351470 -
1622936517.1718652-CDS-E-siliculosus-1a_M_contig95:352152..3522471622936517.1718652-CDS-E-siliculosus-1a_M_contig95:352152..352247Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 352153..352247 -
1696251113.4648046-CDS-E-siliculosus-1a_M_contig95:352152..3522471696251113.4648046-CDS-E-siliculosus-1a_M_contig95:352152..352247Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 352153..352247 -
1622936517.1921277-CDS-E-siliculosus-1a_M_contig95:353075..3532031622936517.1921277-CDS-E-siliculosus-1a_M_contig95:353075..353203Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 353076..353203 -
1696251113.4779973-CDS-E-siliculosus-1a_M_contig95:353075..3532031696251113.4779973-CDS-E-siliculosus-1a_M_contig95:353075..353203Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 353076..353203 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936517.204161-UTR-E-siliculosus-1a_M_contig95:353203..3532311622936517.204161-UTR-E-siliculosus-1a_M_contig95:353203..353231Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig95 353204..353231 -
1696251113.488133-UTR-E-siliculosus-1a_M_contig95:353203..3532311696251113.488133-UTR-E-siliculosus-1a_M_contig95:353203..353231Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig95 353204..353231 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17501.1prot_E-siliculosus-1a_M_contig95.17501.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig95 345249..353203 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig95.17501.1

>prot_E-siliculosus-1a_M_contig95.17501.1 ID=prot_E-siliculosus-1a_M_contig95.17501.1|Name=mRNA_E-siliculosus-1a_M_contig95.17501.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=427bp
MDADEEETKTMQAVKLPEQALELAFHPHRDVLATGLVNGSVCLHTYSPEG
HQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQEM
AHSWPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAF
ATNEDSDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGSR
VVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDG
IIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHA
GYLFEEDEDDDDEEEEAEQTAGASSSHATGGAGQGGGGAASATDNLDMDT
DSDGHGGDGGRKGAGGADDGDDDDSDDEDSDDSDMGGGGGGVKGGRKGGG
GNGDGGGGGGGRGKLPTANEAFFADL*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig95:345249..353231-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig95.17501.1 ID=mRNA_E-siliculosus-1a_M_contig95.17501.1|Name=mRNA_E-siliculosus-1a_M_contig95.17501.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7983bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:345249..353231- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
AGAGCAGCAACCCACAGCAGCAGCTACGATGGACGCCGACGAGGAGGAAA CGAAGACCATGCAAGCCGTTAAGCTCCCGGAACAAGCTCTGGAGCTCGCC TTCCACCCTCATCGGGACGTGCTGGCCACCGGGCTCGTAAATGGCAGCGT TTGCCTGTGAGTATTTTGTGGTGGATCAGGCCGCCGTCGCGTGTGGAGGT TGATGTTTCGAGACAGCCGTAGACGCAAAATAAACATGCGCTCCGGGATC ACGGGCGCTTGCCATCCTCTGGGACGAGACCTTGTGTCTTCGACTCTCCG AACCGATTTTCAGCTCAGGTTGGCAGTTGGTTGATGTACCCTCATGGTTG AACTACTACTGCTGTGTTGACCTGTCGACGCTCCGACAACAAGCACCGGC GCAGCAGTGACAACACGTGCTGCCGTCGATAGCTGTACTCTCCGTACCTA CTGTTGTTCTTACCGGCAACGTCCTCTCTGTTGCGGTCCTCGGGCCGGCG TGGCGTCTCTGATGCATCCATATTAGGTGTATGATTCGATTGACCAAGTG CACGAACATATAGCACACGCGTAGCCCTGTGAGACCGCCGGCAACAGCAA TAACAAACCCCCGAGGGGTGGGGCAAGATTGAAGGCTCCCAGAGATTCAG CACGACGTCAACCTTTGTCATACAAACCTGCAGCTTGCGCCGGCACGCGT TGCCTCTTTTTTTCTCTGCCGCTGTCTGTCTGTCTGTCTATCTGACTGAC TGACTGTCTCTCGTGACTGCCAAGGCGCGACGACCTAATACCACCCCGAA CAGCACGTTTGGTGCAACGACGGCCACTCTTCAATTCCCGCAAACAACAG CTGCATACACTAACGTGAAACACCCACAAGCTGTTCAAACAAGCTCGACG CATATTCCTACTCCTGTTTCGCAGGAACAACCCCCCCCCGCCTGACCCTT GGTATCATACGTACACGCGGTGATGGTGCGGCAGGCATACCTACTCGCCA GAGGGGCACCAGCTGGCTCTCGAGCTGTCGCACCACCAGGCCTCGTGCCG AAGCGTCCTCTTCTCCGAGGATGGTGCCGGTGAGCAGCCCCGGGCCGAAA CCCTCAACCCTCTTCCAGTGTACTGCGGCAGGACAAGGGTTGTCGTTGTC GCCTCGTCGTTGTCGTTGTCGTCGTTTTGGGCTGGAAAAGGAGTTGGGGT GTTGGCATAGGCGCTTATGCTGGCGCGATAGGCCCGGCTGTTGCTCTGCC TCTGGCTGGTTGGAGGGCCGCGTTTTTTCCCGCTTGCTCACTTGTGTCCC CCCCAACTCACAGGCCCTACATGTCGTCTAGAAGAGAGGATAGAAGGGCA TTCTTCTTGTCGGGCAATGGAGGACAATCTTTCCACCTAGAACGTCACAC CGAGAGACAGTGTGCCTCTTCCAACACGATGAATTCGTTTGGAAATGCTC ACCGCGTTCAATCCCCCCGCCCCACGCATTGCGAAGACAACCACACGGCG CCCAACGACAGCGTAGCCCTGGTCCTTGGATACTCTTCTTGTTCATGCTA TGTGTATGATAGTTTAGTCTTGAAAACCGGGTGTCAACCTAGAGTCTCTG TCCCCTTCAAAGAGCGAAAGGCGTTCCCTTTTCAGCCCTTCCCGAAGTAT TACATTTTGTTCCTGTATTCCCTTAGCATGTGGAATCGCGCCCGCCCTGA CTGACCCGCAGCTTCCCCGCCCGTCTGTCCACTCCCCTCTCTCCCGTGCG CGTCCTCCCAGCGCTGTACACGGCTTCGAAGGACAGGTCCATCGCACAGG CAGGAGAAACAGGACAGGTGAGCAGCCCGCCCGTCCCCCCGCCACCCCGC TACCGCGGCGGCTTGGCACCCGACTGCGTCCCATGCCCTCTTCGCGTACG CTTACACCCTTCAGCGAACACGCTGAACCAACCCTGCCGGCCGTAGCTGT TTATCTGAACATGTCGGGGTTCCAATGCCACACACACCCTTTCGTACTTA GGTTCAACGCACCTCTGCTTGCCACTGCTGTTGAACCCAAACCAAGGGTG CGCCCCCCTCTCCAAATGATTCGAATTATGCATACGTCACACCGAACCCT GCGTGCTCTGCGTCTGCATCGTGTTTCCCCCCCTAGTCTTGGCAATTACA ACGCCATGCTTTATGTCAAACGCCATGCTTTATATCAGTTGAGGTCTGCT TGGAAGACGGCCCAACACCTTCTCCTTCTTCTTCTCAGCGTAGTATGACC TTAACCAAAAAAATAGTTCTTGCCCAACGCTTGTTATCCGTGTAGCAATA GTTCGTTCCTTCGATTCTGGACGACTAAACACACAGGGAAATAGATCCCG TCCTTCACCCCTTCGTACCGGCGTTTGTGTTTGTCGATTCGTTTTGTTCA CCTATTTTTTCAGGTCACCTGGAGGCAAGAAATGGCTCACAGCTGGCCGG TCAACGCACTGCACAACGTGTCTGAAGGAATCCTGGCCAGCGGAGACGAC CAGGGAGTCATCAAGGTTTGACGATCGACTTTTGTTCCCAGCACATTTTG CATACAACGTCTTACCTTTGCTCTACTACCGCTGGTGATTGCATGCCGGT CCCTTTATGGAGCTGCTTGCCGAAGGTCTGCTGGTGATGCACGACCGGCG GCGCTGCTCTAGGTGGCGTTTTTCTGTTGGGTCTCCTACCTCTAGCGGTG GCATTTGCTATGGTTCAAGGGCGCTACAAGAGTATGTTGACACGTCGTGT CTTCACCATGGAGGTGTTGGGAACACAGCTAGTTTTCTACCAGCGCGGTA TCATCGCATGTTGTTCGTTGTAAGTCCATGGGCCGTACATGCATGGGAAT GTCGAAAATACCGTAGCCAAACCTCAACCTTGAGTTCGACCGTGCCGAAT ATCTCCTGCAAGCGGACCCCCAGTGCATCTGCTTGCTGTGCCACCCCGAG ATCTTCTAACGCGCGCCCGTTGTTTGTGCCCGACATGCTGCGGCAGCTTT GGGACACGAGAGCCAAGAATGAGGTTGCCAAGTTCGACGTGAACGAGGTG GGTTTCGAGCTCCATTGAGCGCCCAACACACGTAGATCGCTTGGGAACTG TGTGCTGAACCAGTCGCTCTAGTGTGAGAGACCGAAGCTAGGAGCAAAAG CGGGGATTAGATGGGTTGGGCCTTGCAGTGGAAGAAACGAATGATGGCCA GAGCTTCAGGTTTCGTGCCGTAGCTGTTTGTCTGGGAAGTGTCAAACAGC TACGTATGCATAGCTTTCTTATCTAGGCACCGACGAGTGGGGTCTTCCTT CCTTGTTGTTGCCGTTTTGTTGTTGATCTTGTCAAGCTTGGATCCTTGAG TCTCAGTGTTGCTGCTGCTACCGCGGTTTGATGCCCGCCCTCTCTCGCTG TGTGCCGTAGTACTTGTGTTTATTGTTTCTTGCAATGCGTTAAAGGCAAC GAATGACAATGTATGTGTTGGTTGTTTTATGTTCAGTTGTGTTTGACTTT GTTGGAATTCAGTCCTGTTCACCTCCACGTAGCGCCTCTATAGTGAAGCT GTACCGCGCCGTCAAGACAGAAAATCGAAGTAAGCCTCCCCCCACCCATA CCACGGTCATTTTCCCGCCCCTCCTTGACCCACGCAGGACTTCATTTCGG CCTTCGCCACCAACGAGGACAGCGACAAGCTGCTAGCCACAAGGTGATGC CGTGCGTCCGCGCCTTTGTTGTGTTGTCTTTGGGAAGAAAATATACGAGT GAACGTGGTGGCGGTGGCGGCGGTGTGCGGACGGGCCTACAGGCGTCCGA TTTGCCAAGGGAAGGAACAAGTGTTGTGGTCCAGCCGATGAAGTTGATGG GAAGACCTCGGTGGCGGGCGGCGACTGTGGTTGACGCTGCCACGGGCGAT AGGCATGCTGTTCAGCGAATGTTTTCGTCGTTGGACGTGTCTCTGGCTTT GTCCTCGATGCTGCTGAACTTGTCGTGTTTCTGTTGTTTATTGTCCTCGA TGCAGCACGTACTTGTCAAGCCTGTCCACGCGTGCGCGCGTGCGCTGTGA GTCTGCTTTTCATTGCACCGTTTGCTCTCTCGGAGCTTGTGGCGTGGTCT TGGGGCACGTAGTAGACGTCCTCTCTTTTTGTTGTTGATTTTTTTTGTGT ACTATCGCGGGGCGCAGAAGACAGAGGTGCAGGCTGAATGTTTCGCGCTT TCCTTCCCCGTGGTTGTTTGTTTCCGACTTTGCGCGCACCATCGTGCTGT TGTCCGGAATGCTGGGTACAACCAATCGCTCTAGATATCCGTTAGCCATG TTATGTCGCTTTGTTTTCATTCGCCTTCTACATTGTTAAGGTTGGCCGGC CCCGCCGTGTTGCCGACCACTTCAATGGCCCCATCCTTGCTGCATTTCGG CTCCCAAAGGACGCCGCGCGTTCGATGTCCTTGTGTCTCTTCTTGTCATG GGTCGACCCTCTCGACACAATTATCAATCGCGTTGCATTGCCATCTGTTA TTTTTCGTTTGTTTGTTCCTGGTCTATCGTTAGCGCACACAGTCTTGCAC GGTGCCACGAAACGCTCGGTGTGCCGACAGACCCAGTCCCTTTCGTCCAA TATGTTTCGTTTCAACCCCTCTGGCTCTGCCCTCGCCCTTGCCGCCGACG CCGCGGCGCGTGCTTGTTCCCGACGCGTCCGAAAACAGCGGAGACGCTAC CCTGGCGGTGTTCGACCTTCGGCAAAAGAGGCTGGAAGGGAGGGTCACCA ACCAGGAGGATGAGCTGCTCTCGATCCAGATTGTCAAGGCGAGTGAGAAG GGGAACGGGCACCGCCACACACACCCGCACGTGAAGTGTCTATTGCTGTA GCGCGCCGGGTGTTTTGTGTGTTGTCGACCGGAACGTTTAGCTGGTGGGA GGTGCGGGAAAAGGCCGGTATTTTGTAGGTATGGTATATATATGTATTAA TGATTTCTCGCTAGAAGGGCGAGCGGTGTTGACAATCGCCCCAATGGCAA CAAGGTGGGTTTGTAATCATCACCGTGCTTGACGTGATGGGAAACAAAGC GGGAATACCGGTCGATTCGCTCGTTGCGTGGCTCCGGTATGGGAAGCAAA GATACGCGGCCGTGCAGAAGCGAGTAGAAATCGCTCGGCCGGGGGACGTG AGCTACATCAAGGAGCCGGGGGGACTTGAGTATTGTCCCCAAGTTGGGGG ACATATCTATCGGTGATTCGCTCTGAAACTCTTGCCTGCGTGGCAAGTCC AACGGGGGCAAGCAGCAAGTGAGTAACCCCTCGCCGTCCCCTCATCGCAG AATCCCTCTATCTTCCAACGCGTTGGTTTGTATTGTACCCCCCGCCGTGG CTATTTGGCTCGTGCGTCCCTCTCGCCTCCTCGTTTTGTTTTCGCTGGCA GAATGGCAGCAGGGTAGTGTGCGGCACTCAAAACGGCGTTCTCGTCTCGT GGCCCTGGGGGACGTGGGGGGACCGTTCCAGCAGATTTCGGGGTGAGGGG ACGTACGTGCCGGGAGCAGACGCAGAGGGTCAAAGCACGGCCACGTAGAG AGTCAAAGCACGGCCACCGATGCTCATTCGTTCCATCCACGCTCATCCTC CCGTCGCTCGGTCCCCGGTTAAACCCGTTCGTTCGCGTTGGATTGCACCG GGTTTGCTCGCTCCTCCTTTTCCGGTCTGTACGCTCAAAACCATCGTGCT GCTTGGTCGGCTTGTTGTTTTTCGTCAGGCCATCCGCACTCGGTCGACAC GCTTCTCACGCTCGACGAAGACACCGTGCTCACGGGCTCAAGCGACGGGA TCATCAGGCAAGGGCAACAAAGATAGATTGCCTACCCGAACATGATGGGG TAGAGAATACGCTTGAAAGCGCCACGTGCAGGCGCATCCGAATCGCTCAT CGTTTTCAACGATTTTCTTGTAGCATTGCCGAAATCTTGTACACGCGCCA CGGCAAAGAAAGGGTGTCGATGGGCGTTTCAAGCGATTCGTATAGCTGTC TGTCTGGATGTTCATTTAACTCGGAAAACATTGCGTAGTCCTCCTCCCTC TTGGCATGCCCCCTACCACCGTCCGTATTAGCATGCCGTTCAAGCTCCAT CGGCCCTGATTGACGGCAGCAAATCAAAATTATTGGGCGCGCGGAGTTTC ATATGCGGTTGGGGAAATTGTGCCAACGAAACTTTTTTTGGCCATGTGTT GACAGCTAGATGCTCCAAAGGAATCTAGTCGCCGAAAAAGCGACAACACG TCGTGTTCCGCAGTACATACAGAGGAAACAATCTCAGGAGTCAACCAGCT GATTATGTACGATTTCATCCCGCATTTCCCCCCTGCCCCTACGTCCCCCG CCACCCCCCCCCCAAACTTTCTTTGGTGCGGTGATGCGCCAACCAGGGTG GTGAGCATCCAGCCAGATAAATTCCTGGGGCTGTTGGGGGATCACGAAGA TTTTCCGGTGGAGTCTATCCAGGTGAAGGGAGAGAAAATACAAGTGCTCG TCGGGATTATAGTTCGGTGCCCATGCTTCCAAAAGAACGCAATTTTGTTG TAGTAGTTGTGTGATGTGCCTGTGACAACGGAAGGCGTCGGCGTCAATTA AAGGTACTGAGCAGAGATCGGACCGGTGTGTCATGTGAAGACAACAAGGA CAGCATTCAAACTGCGGGTCTAAGTCCTGTTTGTGGTGTTCCCCCGGCAT ACTTTGGCTGCGGTTGCCTCCGTTTTCTTCTGCCCCCCCGCGTCCCCTCT GATTGTTCAGTTTTGTTTCCTTGCTGTTTGGTTTTGTGGTCGTTCCAGCT CCCTGTCGCTTCTTCGTGCATGGCCTACTTCCTTCGTCTGAGCATATATT TGCTTGCCATCCCCCCCCCCCCCCGCGCGCGCGTTTTTTACTACCATGCG TGGTTTTTGAATCAAGTTCTCACGGGACAAGATGTGGATTGGCAGCGTCT CCCACGACAACAACATCCGGTTCTGGCACGCCGGGTACCTCTTCGAGGAG GACGAGGACGACGACGACGAAGAAGAAGAGGCGGAGCAGACCGCCGGTGC GAGCAGCAGCCATGCTACCGGGGGGGCAGGACAGGGGGGAGGAGGAGGTA AGCAGGCGGGCAACCCTTGGTTGTCTTTTTCGGCTCTTGCCAGAGCTGGT GAAGGAATTTCCAGCAAATGGACCGGGGTATATATACCGCCGCTTTAACG TTCGCGTGACACGTGTGGGGAAGACGAGAGAGTTGGCGGGCGGAGGATTT TTTGGTGTCGGCTGTTGGAAGTGCGAAATCTCGTCTGTACGAAAGACGCG GGAAGGTGAAACAACTGCAGCGGGACCTGCTGCATGTATTCTGGGTACGG CGCTAGTGGTCCTGTTGGCTTTCAACGGATTATTTACAGCCTCAACCGAG AGCCCCCCCCCTCCCCACATCTTCATTGGTAAGTAGTCCTTGCTACGGCC GGTGAAATCGCGTGGCACCGAAGGAGTATCCAAGCTGTGGTCTGCCTTGT TAATCCGCAAAGTGACGGGTGCCCGGGTATAAAAGACTGGCCAAATCCCT TGGCCATATTTCAACGTTTGAAACATACTGGCCCTACCCTCCCCCTCTTC TCGAGGACGCGTGGTCAATGGTGTAACCGCTAAGGCATGCAAAAGATATG AGTACGCCCGCCCCCGCTCGCTGCCCTCCCTGCCCTTCCTGGCCTCCCTG CCCTCCCTTTCTTGCAGCAGCATCAGCAACCGATAACCTCGACATGGACA CCGATTCAGACGGGCACGGGGGCGACGGCGGCAGAAAAGGCGCTGGGGGG GCCGACGACGGAGATGATGACGACAGCGACGACGAAGACAGCGACGACAG CGATATGGGTGGTGGGGGCGGGGGGGTAAAGGGGGGAAGGAAAGGTGGTG GCGGCAACGGTGACGGCGGCGGCGGAGGCGGCGGGCGGGGCAAGCTTCCG ACGGCGAATGAGGCGTTCTTTGCGGACTTGTAG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:345249..353231-

>mRNA_E-siliculosus-1a_M_contig95.17501.1 ID=mRNA_E-siliculosus-1a_M_contig95.17501.1|Name=mRNA_E-siliculosus-1a_M_contig95.17501.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2562bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:345249..353231- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGACGCCGACGAGGAGGAAACGAAGACCATGCAAGCCGTTAAGCTCCC
GGAACAAGCTCTGGAGCTCGCCTTCCACCCTCATCGGGACGTGCTGGCCA
CCGGGCTCGTAAATGGCAGCGTTTGCCTATGGACGCCGACGAGGAGGAAA
CGAAGACCATGCAAGCCGTTAAGCTCCCGGAACAAGCTCTGGAGCTCGCC
TTCCACCCTCATCGGGACGTGCTGGCCACCGGGCTCGTAAATGGCAGCGT
TTGCCTGCATACCTACTCGCCAGAGGGGCACCAGCTGGCTCTCGAGCTGT
CGCACCACCAGGCCTCGTGCCGAAGCGTCCTCTTCTCCGAGGATGGTGCC
GGCATACCTACTCGCCAGAGGGGCACCAGCTGGCTCTCGAGCTGTCGCAC
CACCAGGCCTCGTGCCGAAGCGTCCTCTTCTCCGAGGATGGTGCCGCGCT
GTACACGGCTTCGAAGGACAGGTCCATCGCACAGGCAGGAGAAACAGGAC
AGCGCTGTACACGGCTTCGAAGGACAGGTCCATCGCACAGGCAGGAGAAA
CAGGACAGGTCACCTGGAGGCAAGAAATGGCTCACAGCTGGCCGGTCAAC
GCACTGCACAACGTGTCTGAAGGAATCCTGGCCAGCGGAGACGACCAGGG
AGTCATCAAGGTCACCTGGAGGCAAGAAATGGCTCACAGCTGGCCGGTCA
ACGCACTGCACAACGTGTCTGAAGGAATCCTGGCCAGCGGAGACGACCAG
GGAGTCATCAAGCTTTGGGACACGAGAGCCAAGAATGAGGTTGCCAAGTT
CGACGTGAACGAGCTTTGGGACACGAGAGCCAAGAATGAGGTTGCCAAGT
TCGACGTGAACGAGGACTTCATTTCGGCCTTCGCCACCAACGAGGACAGC
GACAAGCTGCTAGCCACAAGGACTTCATTTCGGCCTTCGCCACCAACGAG
GACAGCGACAAGCTGCTAGCCACAAGCGGAGACGCTACCCTGGCGGTGTT
CGACCTTCGGCAAAAGAGGCTGGAAGGGAGGGTCACCAACCAGGAGGATG
AGCTGCTCTCGATCCAGATTGTCAAGCGGAGACGCTACCCTGGCGGTGTT
CGACCTTCGGCAAAAGAGGCTGGAAGGGAGGGTCACCAACCAGGAGGATG
AGCTGCTCTCGATCCAGATTGTCAAGAATGGCAGCAGGGTAGTGTGCGGC
ACTCAAAACGGCGTTCTCGTCTCGTGGCCCTGGGGGACGTGGGGGGACCG
TTCCAGCAGATTTCGGGAATGGCAGCAGGGTAGTGTGCGGCACTCAAAAC
GGCGTTCTCGTCTCGTGGCCCTGGGGGACGTGGGGGGACCGTTCCAGCAG
ATTTCGGGGCCATCCGCACTCGGTCGACACGCTTCTCACGCTCGACGAAG
ACACCGTGCTCACGGGCTCAAGCGACGGGATCATCAGGCCATCCGCACTC
GGTCGACACGCTTCTCACGCTCGACGAAGACACCGTGCTCACGGGCTCAA
GCGACGGGATCATCAGGGTGGTGAGCATCCAGCCAGATAAATTCCTGGGG
CTGTTGGGGGATCACGAAGATTTTCCGGTGGAGTCTATCCAGGGTGGTGA
GCATCCAGCCAGATAAATTCCTGGGGCTGTTGGGGGATCACGAAGATTTT
CCGGTGGAGTCTATCCAGTTCTCACGGGACAAGATGTGGATTGGCAGCGT
CTCCCACGACAACAACATCCGGTTCTGGCACGCCGGGTACCTCTTCGAGG
AGGACGAGGACGACGACGACGAAGAAGAAGAGGCGGAGCAGACCGCCGGT
GCGAGCAGCAGCCATGCTACCGGGGGGGCAGGACAGGGGGGAGGAGGAGT
TCTCACGGGACAAGATGTGGATTGGCAGCGTCTCCCACGACAACAACATC
CGGTTCTGGCACGCCGGGTACCTCTTCGAGGAGGACGAGGACGACGACGA
CGAAGAAGAAGAGGCGGAGCAGACCGCCGGTGCGAGCAGCAGCCATGCTA
CCGGGGGGGCAGGACAGGGGGGAGGAGGAGCAGCATCAGCAACCGATAAC
CTCGACATGGACACCGATTCAGACGGGCACGGGGGCGACGGCGGCAGAAA
AGGCGCTGGGGGGGCCGACGACGGAGATGATGACGACAGCGACGACGAAG
ACAGCGACGACAGCGATATGGGTGGTGGGGGCGGGGGGGTAAAGGGGGGA
AGGAAAGGTGGTGGCGGCAACGGTGACGGCGGCGGCGGAGGCGGCGGGCG
GGGCAAGCTTCCGACGGCGAATGAGGCGTTCTTTGCGGACTTGTAGCAGC
ATCAGCAACCGATAACCTCGACATGGACACCGATTCAGACGGGCACGGGG
GCGACGGCGGCAGAAAAGGCGCTGGGGGGGCCGACGACGGAGATGATGAC
GACAGCGACGACGAAGACAGCGACGACAGCGATATGGGTGGTGGGGGCGG
GGGGGTAAAGGGGGGAAGGAAAGGTGGTGGCGGCAACGGTGACGGCGGCG
GCGGAGGCGGCGGGCGGGGCAAGCTTCCGACGGCGAATGAGGCGTTCTTT
GCGGACTTGTAG
back to top