mRNA_E-siliculosus-1a_M_contig95.17471.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17471.1
Unique NamemRNA_E-siliculosus-1a_M_contig95.17471.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 462 bits (1190), Expect = 3.820e-159
Identity = 356/387 (91.99%), Postives = 365/387 (94.32%), Query Frame = 1
Query:   97 MLGNNRNIAERNKAAKETLKGEEERVLDLMFDTRCPQEMSEWLAAPLESAVARGDEGLARKLVQAGAKIGGVALHEAVRRGYVAIAGLLLENGASVHDEEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEPGDGERARSLLTRAPADRAWRRRGLLVLCHAHPDRLQLGGDLAGLVARVFGLEEVGVFRTIVVYL 1257
            MLG+NRNIAE+NKAAKETLKGEEERVLDLM DTRCP EMSEWLAAPLESAVARGDEGLA+KLVQAGAKIGGVALHEAVRRG++AIA LLLENGASVHD+EDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRL EFDMS LDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKAN ANAIDVLVGAGADIQAR MSGS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A VG+RR SVQVV LLLRWGADETIV K GKTAADRIGTRR   TEPGD ERARSLLTRAPADRAWRRRGLLVLCHA+PDRLQLGGDLAGLV RV GLEEVGVFRTIV+YL
Sbjct:    1 MLGSNRNIAEKNKAAKETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQLGGDLAGLVDRVLGLEEVGVFRTIVLYL 387          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 1.400e-109
Identity = 301/381 (79.00%), Postives = 318/381 (83.46%), Query Frame = 1
Query:  118 IAERNKAAKETLKGEEERVLDLMFDTRCPQEMSEWLAAPLESAVARGDEGLARKLVQAGAKIGGVALHEAVRRGYVAIAGLLLENGASVHDEEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAAAFG-TALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEPGDGERARSLLTRAPADRAWRRRGLLVLCHAHPDRLQLGGDLAGLVARVFGLEEVGVFRTIVVYL 1257
            +AE NKAAKET+KGE +RVLDLMFDTR P EMSEWLAAPLESAV  G EGLARKLVQAGAK+GGVALHE VRRG++A+A LLLENGASVHD+EDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEF++S LDFAA S  VEI+RMLIDHGMEV+ A + G TAL                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A VG+R  S QVVDLLLRWGADETIVSK G+TAAD IGTRR  RT+P D ERARSLL RAPADRAWRRRGLLVLC AHPDRLQLGGDLAGLVA V GLEEVGVFRTIV+YL
Sbjct:   11 LAENNKAAKETMKGEGQRVLDLMFDTRWPHEMSEWLAAPLESAVVSGHEGLARKLVQAGAKVGGVALHETVRRGHIAMAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFEVSALDFAALSDHVEIVRMLIDHGMEVHRANSDGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQLGGDLAGLVAGVGGLEEVGVFRTIVLYL 391          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 3.880e-43
Identity = 184/378 (48.68%), Postives = 228/378 (60.32%), Query Frame = 1
Query:  130 NKAAKETLKGEEERVLDLMFDTRCPQEMSEWLAAPLESAVARGDEGLARKLVQAGAKIGGVALHEAVRRGYVAIAGLLLENGASVHDEEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAAAFGTA-LHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTE-PGDGERARSLLTRAPADRAWRRRGLLVLCHAHPDRLQLGGD-LAGLVARVFGLEEVGVFRTIV 1248
            N+ A+  L+GEEER+ DL  +T  P++ +  +   LE A  RG E L RKLV+AGA+IG  A+H AVR G+  I   LLE+GAS    +++  TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +  R  + ++S LD  A    V+ +R LI+HG +V+     G A LH A   N   A+DVL+ AGA+ ++ + SG +                                         AT   ++  V+VVDLLLRWGADET V+ +G  AAD IG +       P + E  R LL  APADRAWRRR  LVLC A PD++QL  D +A L ARV GL E G+FRTIV
Sbjct:    3 NECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIG-TAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSDRIARLEARVLGLVEEGIFRTIV 379          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 4.320e-19
Identity = 193/405 (47.65%), Postives = 231/405 (57.04%), Query Frame = 1
Query:  172 VLDLMFDTRCPQEMSEWLAAPLESAVARGDEGLARKLVQAGAKIGGVALHEAVRRGYVAIAGLLLENGASVHDEEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTR-----RLFRTEPGDGERARSLLTRAPADRAWRRRGLLVLCHAHPDRL--------------------------------------QLGGDLAGLVARVFGLEEVGVFRTIVVYL 1257
            ++D +F+    Q+++E L A LE A A+G++ LA++LV+AGA+IG  ALH AV  G+  I   LLE+ AS+   + D  TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T+R T+F       AA    VEILR +I+HG +V+   A                                    XXXXXXXXXXXXXXXXXXXXXXXXXXXX          A     R+ + +VV+ LLR GADETI +  G  A D IG       RL  TE  D ER R LL  APADRAWRRRG L++C A PDR+                                        GG+ A +V++V  L+E G+FRTIV YL
Sbjct:    1 MVDFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGD-ALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRL--TE--DVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 2.400e-18
Identity = 187/368 (50.82%), Postives = 215/368 (58.42%), Query Frame = 1
Query:  142 KETLKGEEERVLDLMFDTRCPQEMSEWLAAPLESAVARGDEGLARKLVQAGAKIGGVALHEAVRRGYVAIAGLLLENGASVH--DEEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAA-AFGTALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEPGD---GERA---RSLLTRAPADRAWRRRGLLVLCHAHPDRLQL----GGDLAGLVAR 1206
            ++ L+G   RVLDL+     P+E + WL  PLE AV  GD  LA  LV+ GA+ G  A++EA+  G   +  LLL+NGASV   D E      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL         S                       VN     F  ALH A   N   A+ VL+ AGADIQ  + S S+                XXXXXXXXXXXXXXXXXXXXXXAA+   R+ S ++VDLLLR GADET   ++G+  ADR+G       E GD   G        LL  APADRAWRRRGLLVLC A   R +L    GGD  G ++R
Sbjct:    6 RKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAG-TAVNEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVG----HCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSR 368          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 2.060e-17
Identity = 71/192 (36.98%), Postives = 92/192 (47.92%), Query Frame = 1
Query:  589 RLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEP---GDGERARSLLTRAPADRAWRRRGLLVLCHA 1155
            R+     S+LDFAA   D  +LR ++ HG++VN      T+LH AA  N   AIDVLV AGA ++       +                                      A   GR+  +  +VD+LLR GADET ++  G+TAA+ +G    +   P    D ER R LL  APADRAWRRRGLLVLC A
Sbjct:  151 RIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTA-IVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 8.250e-16
Identity = 68/192 (35.42%), Postives = 89/192 (46.35%), Query Frame = 1
Query:  589 RLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEP---GDGERARSLLTRAPADRAWRRRGLLVLCHA 1155
            R+     S+LD AA   D  +LR ++ HG++VN      T+LH AA  N   AIDVLV AGA ++       +                                      A   GR+  +  +VD+LLR GADET ++  G+TAA+ +G    +   P    D ER R LL  AP DRAWRRRG LVLC A
Sbjct:  102 RIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTA-IVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 6.810e-13
Identity = 74/198 (37.37%), Postives = 94/198 (47.47%), Query Frame = 1
Query:  670 HGMEVNLAAAFG-TALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEPGDG-----ERARSLLTRAPADRAWRRRGLLVLCHAH--PDRLQLG-----GDLAGLVARVFGLEE 1224
            HG +VN     G TAL  A+  + A AIDVL  AGA+I+A+  +GS+                                      AA  G    + ++VDLLLR GADET VS++G TAAD +    + +TE  D      +R R LL RAPADRAWRRRG L+L  AH    R+Q G        AG+  R    EE
Sbjct:  546 HGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQA-NGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSP-GTAEMVDLLLRRGADETAVSENGHTAADMV----VLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEE 737          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D8LP48_ECTSI (EsV-1-8 n=2 Tax=root TaxID=1 RepID=D8LP48_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.020e-12
Identity = 52/112 (46.43%), Postives = 62/112 (55.36%), Query Frame = 1
Query:  958 VVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEPGDGERARSLLTRAPADRAWRRRGLLVLCHAH------------PDRLQLGGDLAGLVARVFGLEEVGVFRTIVVYL 1257
            VVDLLLRWGADET+  + GKT AD +G  R+   +P   ER R LL  AP DRAWRRRG LV+  AH            P +   GG +  L   V  L E  VFR +V +L
Sbjct:  362 VVDLLLRWGADETMKDERGKTPADYLG--RIRNLDPAVAERVRHLLVNAPKDRAWRRRGWLVMLRAHTLAAGEPVDIPEPKKRGGGGGVCPLKF-VLSLNEDAVFREVVAFL 470          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.690e-12
Identity = 67/207 (32.37%), Postives = 94/207 (45.41%), Query Frame = 1
Query:  601 FDMSLLDFAASSQDVEILRMLIDHGMEVNLAA--AFG-TALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDS--VQVVDLLLRWGADETIVSKHGKTAAD---RIGTRRLFRTEPGDGERARSLLTRAPADRAWRRRGLLVLCHAHPDRLQLGGDLAGL 1197
            F  + ++ A     V +++  ++HG++ +  A  A G TALH AA  N A A++VL+ AGAD    ++ GS                                              +    ++VVDLLLRWGA ET V+KHG T A+   R+   R   TE   G  A  LL RAPADRAWRRRG +V+  A  +  ++     GL
Sbjct:  166 FPNAEINVATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAG--ALVLLARAPADRAWRRRGWVVMLRARSETERIAAQRRGL 370          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G137_ECTSI3.820e-15991.99Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G1U1_ECTSI1.400e-10979.00Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FKL4_ECTSI3.880e-4348.68Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5KXK5_9PHAE4.320e-1947.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYD0_ECTSI2.400e-1850.82Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5KNU3_9PHAE2.060e-1736.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI8.250e-1635.42Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JHY9_9PHAE6.810e-1337.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP48_ECTSI1.020e-1246.43EsV-1-8 n=2 Tax=root TaxID=1 RepID=D8LP48_ECTSI[more]
D7FSI6_ECTSI1.690e-1232.37Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:49966..52478 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size1260
Model size1260
Exons3
Ec32 orthologEc-07_003220.1
Ec32 ortholog descriptionAnkyrin-repeat protein similar to EsV-1-8
Hectar predicted targeting categorymitochondrion
BRITEko00000,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
EggNOG OGsCOG0666@1,KOG4177@2759
EggNOG free text desc.response to abiotic stimulus
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
KEGG koko:K21440
Seed eggNOG ortholog2880.D7G137
Seed ortholog evalue1.8e-128
Seed ortholog score466.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17471.1prot_E-siliculosus-1a_M_contig95.17471.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig95 49966..52478 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936510.2517805-CDS-E-siliculosus-1a_M_contig95:49965..500391622936510.2517805-CDS-E-siliculosus-1a_M_contig95:49965..50039Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 49966..50039 +
1696251110.6034594-CDS-E-siliculosus-1a_M_contig95:49965..500391696251110.6034594-CDS-E-siliculosus-1a_M_contig95:49965..50039Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 49966..50039 +
1622936510.266106-CDS-E-siliculosus-1a_M_contig95:50473..505961622936510.266106-CDS-E-siliculosus-1a_M_contig95:50473..50596Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 50474..50596 +
1696251110.6177661-CDS-E-siliculosus-1a_M_contig95:50473..505961696251110.6177661-CDS-E-siliculosus-1a_M_contig95:50473..50596Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 50474..50596 +
1622936510.2808676-CDS-E-siliculosus-1a_M_contig95:51415..524781622936510.2808676-CDS-E-siliculosus-1a_M_contig95:51415..52478Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 51416..52478 +
1696251110.6281726-CDS-E-siliculosus-1a_M_contig95:51415..524781696251110.6281726-CDS-E-siliculosus-1a_M_contig95:51415..52478Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 51416..52478 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig95.17471.1

>prot_E-siliculosus-1a_M_contig95.17471.1 ID=prot_E-siliculosus-1a_M_contig95.17471.1|Name=mRNA_E-siliculosus-1a_M_contig95.17471.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=420bp
RWFTPNATVGTCRCCWVALPSRLNRKGAAPLNMLGNNRNIAERNKAAKET
LKGEEERVLDLMFDTRCPQEMSEWLAAPLESAVARGDEGLARKLVQAGAK
IGGVALHEAVRRGYVAIAGLLLENGASVHDEEDDYGTPLHAAAEGGSVEA
ARLLLLNGADIDYQDCDHTTPLSRAITGGHISMVEALLAAGADLTVRLTE
FDMSLLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANSANAI
DVLVGAGADIQARTMSGSSALHCAAEEASPKASLALLNLGAEVNAQTDSG
ETALHHAAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRL
FRTEPGDGERARSLLTRAPADRAWRRRGLLVLCHAHPDRLQLGGDLAGLV
ARVFGLEEVGVFRTIVVYL*
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mRNA from alignment at E-siliculosus-1a_M_contig95:49966..52478+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig95.17471.1 ID=mRNA_E-siliculosus-1a_M_contig95.17471.1|Name=mRNA_E-siliculosus-1a_M_contig95.17471.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2513bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:49966..52478+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
AGGTGGTTCACTCCTAACGCGACTGTTGGTACTTGTCGGTGCTGCTGGGT CGCGCTTCCCTCTCGCCTGAATAGGTGTGTCGAAACGTAGGTAAGGTTTT CCTTTCGTTCATTCGGGTTTCCGCCGCCACGCCCATCTGTATTTTGGTTG TGGACGGCTACCGCCAGCGCTATCGATTTTTTCCTGGCTGCCGTCGTCGC GCGCGTTTGATCGCCTTGGTGGATGCCATGTGGTGCACTGGGGAGGAAGA GTGGTCGCGCTTCACCATTGTAATGCGGGATTTTCGGGCACAGGGCTGTC CTACGATGCGCCTTTGCAATGTCTCTCTCGCCTACTTTCTTCTTTCCTTG ACAGTGTTTCAGCAGCGTAGTCGAAGTTTCTAACTGACCAAAGGAAGTGT AGACGCGCCTTTTCATTTATCGACTGCCCGCTATGGTTCATTCTCTCTTG TCTTTGTCTCTATCTCTCTCTCTCCACCCCCTTTTTCTCTCACATTCACA CACACAAGGAAAGGCGCCGCCCCTCTCAACATGCTCGGCAACAATAGAAA TATTGCCGAGAGAAACAAAGCGGCGAAAGAAACGCTGAAAGGGGAAGAGG AGCGAGTGCTCGACCTCATGTTCGACACCAGGTCAGCTGTCCTATCCAGC GACCCTCTCTCTCGCTGCGGGGGGGTCGGATTAACGATGTAGCCTCAGAC AGAATATGAGGGCTGGCTCTCGCCTGATGATGTGGCTCGTGGCTGTGGCT TTGTCACACAGTGTAGTTTTCTCTCTGCATGAACAGAAAAGAGCCTGAGT TGTTGTTAGTCAGGGTAGCTGGAGGCAAAGTATTGATGTCAGCGCATCTT CTGGAACGTGTGCATTGTTCCTCAGATAGGAATCCCAGGCTGTCTCAGTT ACTGAGAGCATGAGATGAGGGAAACTTGGAAGTGGGCCCGGTGGGGCTCG TGTCACCTCGTGATCTCGCTAGGTACTGTTAAGAAGCACCATGACCACTA GGCAGCACTGACTAGCAATCTAGTGGTCATCGTGCTTTTTTAACAGATAC CCACCAATCAGTTATTCCCTAGTGCTCCTCGCTCATACTCGTCGCTTCAA TATCACCGTGAGGTCGTCGTACCATCCGTGACTTGTCACACCGCGTCTAC GTAGTATCGTTGTATCCAGCAACCATACATGCGCATCGTCTATGCTTACT GCACATATTCTACAGCAGTACTGCGCAGTATTCAACAGCCCCCTCTCCCG ACGGCGGTAGAAGTGGTAGTCGCGGTTGGGGTTGCATCTTGGCTGGTGGG GTCGGAAACAAGCGAACTCTCCGTTTCTAGCTTTTCCTACGTAGGTCCGC GCTCCCCGATTCATGGTGCTCTAGATAGACATGCTCCCACCGAGCAATAC ACCGAGCCTACCTCAAACGCTATATTTCAAATGGCTGCTTGTAATCACAG GTGCCCCCAAGAGATGTCCGAGTGGCTGGCGGCTCCACTTGAGAGCGCAG TGGCACGGGGGGATGAAGGTCTGGCGCGGAAGCTTGTGCAAGCGGGAGCA AAGATCGGGGGAGTCGCGTTGCATGAGGCTGTTCGAAGAGGATATGTCGC GATAGCGGGGTTGCTGTTGGAAAATGGAGCATCTGTTCATGACGAAGAGG ACGACTATGGCACCCCCCTACATGCCGCTGCTGAAGGTGGTAGCGTGGAG GCGGCGCGGTTGTTGTTACTCAATGGGGCTGATATCGACTACCAGGATTG CGATCACACCACGCCACTCAGCCGCGCAATAACCGGAGGGCATATCTCTA TGGTGGAAGCTCTCTTGGCCGCAGGAGCCGACCTCACCGTTCGCTTGACC GAGTTTGACATGTCCTTACTCGACTTCGCCGCTTCATCTCAGGATGTGGA AATCTTGCGAATGCTAATCGATCACGGGATGGAAGTAAACCTTGCGGCTG CTTTCGGCACGGCTCTTCATTGGGCAGCGAAAGCCAACAGTGCGAACGCC ATTGATGTGCTCGTCGGAGCTGGAGCCGATATCCAAGCAAGGACGATGTC GGGCTCCAGTGCTCTGCACTGCGCTGCCGAAGAGGCGAGCCCCAAGGCTT CCCTCGCCCTCTTGAATCTCGGTGCTGAGGTCAACGCCCAGACAGATTCC GGAGAAACAGCGCTGCACCATGCAGCAGCCACAGTCGGACGACGACGCGA CTCCGTCCAGGTGGTGGACCTTCTGCTCAGGTGGGGTGCGGACGAGACGA TCGTTTCTAAGCATGGAAAAACGGCAGCGGATAGGATCGGGACCCGAAGG TTGTTTAGGACCGAACCCGGGGATGGTGAGCGCGCGCGGAGCCTATTGAC GCGAGCTCCGGCCGACAGGGCATGGCGTCGTCGTGGTTTGCTGGTCTTGT GCCACGCTCATCCCGACCGACTGCAGCTGGGTGGCGACTTGGCTGGTTTG GTGGCGAGGGTTTTCGGTTTGGAGGAAGTTGGCGTGTTCCGGACGATCGT GGTTTATCTTTGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:49966..52478+

>mRNA_E-siliculosus-1a_M_contig95.17471.1 ID=mRNA_E-siliculosus-1a_M_contig95.17471.1|Name=mRNA_E-siliculosus-1a_M_contig95.17471.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2520bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:49966..52478+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
AGGTGGTTCACTCCTAACGCGACTGTTGGTACTTGTCGGTGCTGCTGGGT
CGCGCTTCCCTCTCGCCTGAATAGAGGTGGTTCACTCCTAACGCGACTGT
TGGTACTTGTCGGTGCTGCTGGGTCGCGCTTCCCTCTCGCCTGAATAGGA
AAGGCGCCGCCCCTCTCAACATGCTCGGCAACAATAGAAATATTGCCGAG
AGAAACAAAGCGGCGAAAGAAACGCTGAAAGGGGAAGAGGAGCGAGTGCT
CGACCTCATGTTCGACACCAGGAAAGGCGCCGCCCCTCTCAACATGCTCG
GCAACAATAGAAATATTGCCGAGAGAAACAAAGCGGCGAAAGAAACGCTG
AAAGGGGAAGAGGAGCGAGTGCTCGACCTCATGTTCGACACCAGGTGCCC
CCAAGAGATGTCCGAGTGGCTGGCGGCTCCACTTGAGAGCGCAGTGGCAC
GGGGGGATGAAGGTCTGGCGCGGAAGCTTGTGCAAGCGGGAGCAAAGATC
GGGGGAGTCGCGTTGCATGAGGCTGTTCGAAGAGGATATGTCGCGATAGC
GGGGTTGCTGTTGGAAAATGGAGCATCTGTTCATGACGAAGAGGACGACT
ATGGCACCCCCCTACATGCCGCTGCTGAAGGTGGTAGCGTGGAGGCGGCG
CGGTTGTTGTTACTCAATGGGGCTGATATCGACTACCAGGATTGCGATCA
CACCACGCCACTCAGCCGCGCAATAACCGGAGGGCATATCTCTATGGTGG
AAGCTCTCTTGGCCGCAGGAGCCGACCTCACCGTTCGCTTGACCGAGTTT
GACATGTCCTTACTCGACTTCGCCGCTTCATCTCAGGATGTGGAAATCTT
GCGAATGCTAATCGATCACGGGATGGAAGTAAACCTTGCGGCTGCTTTCG
GCACGGCTCTTCATTGGGCAGCGAAAGCCAACAGTGCGAACGCCATTGAT
GTGCTCGTCGGAGCTGGAGCCGATATCCAAGCAAGGACGATGTCGGGCTC
CAGTGCTCTGCACTGCGCTGCCGAAGAGGCGAGCCCCAAGGCTTCCCTCG
CCCTCTTGAATCTCGGTGCTGAGGTCAACGCCCAGACAGATTCCGGAGAA
ACAGCGCTGCACCATGCAGCAGCCACAGTCGGACGACGACGCGACTCCGT
CCAGGTGGTGGACCTTCTGCTCAGGTGGGGTGCGGACGAGACGATCGTTT
CTAAGCATGGAAAAACGGCAGCGGATAGGATCGGGACCCGAAGGTTGTTT
AGGACCGAACCCGGGGATGGTGAGCGCGCGCGGAGCCTATTGACGCGAGC
TCCGGCCGACAGGGCATGGCGTCGTCGTGGTTTGCTGGTCTTGTGCCACG
CTCATCCCGACCGACTGCAGCTGGGTGGCGACTTGGCTGGTTTGGTGGCG
AGGGTTTTCGGTTTGGAGGAAGTTGGCGTGTTCCGGACGATCGTGGTTTA
TCTTTGAGTGCCCCCAAGAGATGTCCGAGTGGCTGGCGGCTCCACTTGAG
AGCGCAGTGGCACGGGGGGATGAAGGTCTGGCGCGGAAGCTTGTGCAAGC
GGGAGCAAAGATCGGGGGAGTCGCGTTGCATGAGGCTGTTCGAAGAGGAT
ATGTCGCGATAGCGGGGTTGCTGTTGGAAAATGGAGCATCTGTTCATGAC
GAAGAGGACGACTATGGCACCCCCCTACATGCCGCTGCTGAAGGTGGTAG
CGTGGAGGCGGCGCGGTTGTTGTTACTCAATGGGGCTGATATCGACTACC
AGGATTGCGATCACACCACGCCACTCAGCCGCGCAATAACCGGAGGGCAT
ATCTCTATGGTGGAAGCTCTCTTGGCCGCAGGAGCCGACCTCACCGTTCG
CTTGACCGAGTTTGACATGTCCTTACTCGACTTCGCCGCTTCATCTCAGG
ATGTGGAAATCTTGCGAATGCTAATCGATCACGGGATGGAAGTAAACCTT
GCGGCTGCTTTCGGCACGGCTCTTCATTGGGCAGCGAAAGCCAACAGTGC
GAACGCCATTGATGTGCTCGTCGGAGCTGGAGCCGATATCCAAGCAAGGA
CGATGTCGGGCTCCAGTGCTCTGCACTGCGCTGCCGAAGAGGCGAGCCCC
AAGGCTTCCCTCGCCCTCTTGAATCTCGGTGCTGAGGTCAACGCCCAGAC
AGATTCCGGAGAAACAGCGCTGCACCATGCAGCAGCCACAGTCGGACGAC
GACGCGACTCCGTCCAGGTGGTGGACCTTCTGCTCAGGTGGGGTGCGGAC
GAGACGATCGTTTCTAAGCATGGAAAAACGGCAGCGGATAGGATCGGGAC
CCGAAGGTTGTTTAGGACCGAACCCGGGGATGGTGAGCGCGCGCGGAGCC
TATTGACGCGAGCTCCGGCCGACAGGGCATGGCGTCGTCGTGGTTTGCTG
GTCTTGTGCCACGCTCATCCCGACCGACTGCAGCTGGGTGGCGACTTGGC
TGGTTTGGTGGCGAGGGTTTTCGGTTTGGAGGAAGTTGGCGTGTTCCGGA
CGATCGTGGTTTATCTTTGA
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