prot_E-siliculosus-1a_M_contig94.17449.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17449.1
Unique Nameprot_E-siliculosus-1a_M_contig94.17449.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length346
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17449.1 vs. uniprot
Match: D8LN17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN17_ECTSI)

HSP 1 Score: 578 bits (1491), Expect = 1.420e-206
Identity = 333/338 (98.52%), Postives = 335/338 (99.11%), Query Frame = 0
Query:    1 MREEQALLAGLVAVCAXXXXXXXXXXXXXXXXXXXXQQQQSFTNGNLGREEERRHLQATDADRVASSRVIVPSLLFHVLVFLCLAVEVPVYACRWLSSSGIAVGLVQGDRSLYALHMTSYLLLFMAFSVVVTLWNDVAVFEPNECTALMNRSMVALCVCYVLVTGIAVSVCLGVGNVKNFLSSFAFLLFCAYSIAVLLLLGASFLVLGCLLQQRICRVLVTGSCTARLTARIVRLNVVMLACFTCFTMRALMLAGLIQAQAEGEESGNYASGWKRREQDMRLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTPAGKDYGGDERTGFSGAVVEDGYG 338
            MREEQALLAGLVAVCAXXXXXXXXXXXXXXXXXXXXQQQQSFTNGNLG+EEERRHLQATDADRVASSRVIVPSLLFHVLVFLCLAVEVPVYACRWLSSSGIAVGLVQGDRSLYALHMTSYLLLFMAFSVVVTLWNDVAVFEPNECTALMNRSMVALCVCYVLVTGIAVSVCLGVGNVK FLSSFAFLLFCAYSIAVLLLLGASFLVLGCLLQQRICRVLVTGSCTARLTARIVRLNVVMLACFTCFTMRALMLAGLIQAQAEGEESGNYASGWKRREQDMRLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTPAGK+YGGDE TGFSGA VEDGYG
Sbjct:    1 MREEQALLAGLVAVCAXXXXXXXXXXXXXXXXXXXXQQQQSFTNGNLGQEEERRHLQATDADRVASSRVIVPSLLFHVLVFLCLAVEVPVYACRWLSSSGIAVGLVQGDRSLYALHMTSYLLLFMAFSVVVTLWNDVAVFEPNECTALMNRSMVALCVCYVLVTGIAVSVCLGVGNVKYFLSSFAFLLFCAYSIAVLLLLGASFLVLGCLLQQRICRVLVTGSCTARLTARIVRLNVVMLACFTCFTMRALMLAGLIQAQAEGEESGNYASGWKRREQDMRLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTPAGKEYGGDESTGFSGADVEDGYG 338          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17449.1 vs. uniprot
Match: A0A836C8B0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B0_9STRA)

HSP 1 Score: 179 bits (454), Expect = 3.520e-49
Identity = 117/289 (40.48%), Postives = 158/289 (54.67%), Query Frame = 0
Query:   55 HLQATDADRVASSRVIVPS-LLFHVLVFLCLAVEVPVYACRWLSSSGIAVGLVQGDRSLYALHMTSYLLLFMAFSVVVTLWNDVAVFEPNECTALMNRSMVALCVCYVLVTGIAVSVCL-GVGNVKNFLSSFAFLLFCAYSIAVLLLLGASFLVLGCLLQQRICRVL------------------------------------------VTGSCTARLTARIVRLNVVMLACFTCFTMRALMLAGLIQAQAEGEESGNYASGWKRREQDMRLEWALHVIPCVAMLYLMR 299
            H  AT    +     ++P   +FHVLVFLCLAVEVPVYA  +++  G  V    G R LYALH+TSYLLL  AF ++V LW+ VA FEP+    L NR ++ LCV Y LVT +AV  CL    + +++ +S  F+ FCA+SI  LLLL A FLVLGCL+QQRIC  L                                                  LT  ++RLN V+L CF CF+ RAL+L  L++ +  G ++     GW R +Q++ +EW  +V+PC+A+LYLMR
Sbjct:   60 HHYATQDQTLPQEESLLPQRAMFHVLVFLCLAVEVPVYAYHYVTLRGQDVSFEVG-RDLYALHLTSYLLLCAAFCIIVMLWSSVASFEPSAWLLLANRLLLVLCVLYFLVTAVAVGRCLCEASSSQSYFTSLPFITFCAFSIGALLLLAACFLVLGCLMQQRICSALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTGTVLRLNAVVLTCFVCFSARALLLVRLLRLETAGADA---LGGWTRWQQEVYVEWIPNVVPCLALLYLMR 344          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17449.1 vs. uniprot
Match: A0A7S3XM64_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM64_HETAK)

HSP 1 Score: 112 bits (281), Expect = 7.300e-25
Identity = 84/255 (32.94%), Postives = 130/255 (50.98%), Query Frame = 0
Query:   69 VIVPSLLFHVLVFLCLAVEVPVYACRWLSSSGIAVGLVQGDRS--------LYALHMTSYLLLFMAFSVVVTLWNDVAVFEPNECTAL-MNRSMVALCVCYVLVTGIAVSVCLGVGNVKNFLSSFAFLLFCAYSIAVLLLLGASFLVLGCLLQQRICRVLVTGSC-TARLTARIVRLNVVMLACFTCFTMRALMLAGLIQAQAEGEESGNYASGWKRREQDMRL-----EWALHVIPCVAMLYLMRKAGEPSSSS 308
            V+   LLFH L+ L L +++P+Y C  ++ S       QG+          LY +++ SY LLF AF +V+ LW  + +F       L + RS+VA+C+ Y L +  A   C+   ++ ++L S  ++LF    I VL  L  +FL++GC+LQ RICR L        R  A + RLN V+  C   F MRA +L   + A A   ++ + A+        +       EW  H+ PC+A++YL+R A  P  SS
Sbjct:   64 VVQQKLLFHQLILLSLMLQIPLYVCYAIAGS-------QGEEDSSERYFEYLYPVNIMSYWLLFCAFCLVINLWASLVIFNTGSRWILVLRRSLVAICILYALASMYACLDCIFSSSLWSWLESGTYVLFDFCCIGVLTFLSGAFLIVGCMLQGRICRALAPQERGRPRFWATVARLNGVIFVCTISFAMRAALLLASLAAGAPYADTVSPAAAAPPAALSVETWLVLAEWVPHLAPCIALMYLLRNASGPEVSS 311          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17449.1 vs. uniprot
Match: A0A6H5KRT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRT8_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.500e-23
Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 0
Query:  280 MRLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTPAGKDYGGDERTGFSGAVVEDGYG 338
            M LEWALHVIPCVAMLYLMRKAGEPSSSSSSTATT AGKDYGG+ERTGF+GA VEDGYG
Sbjct:    1 MMLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATT-AGKDYGGNERTGFTGADVEDGYG 58          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LN17_ECTSI1.420e-20698.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8B0_9STRA3.520e-4940.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XM64_HETAK7.300e-2532.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5KRT8_9PHAE1.500e-2391.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 208..236
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 299..345
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 262..280
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 237..261
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 176..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 281..298
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 135..153
NoneNo IPR availableTMHMMTMhelixcoord: 6..28
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 154..176
NoneNo IPR availableTMHMMTMhelixcoord: 189..211
NoneNo IPR availableTMHMMTMhelixcoord: 232..251
NoneNo IPR availableTMHMMTMhelixcoord: 112..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:538072..541969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17449.1mRNA_E-siliculosus-1a_M_contig94.17449.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig94 536890..542054 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17449.1 ID=prot_E-siliculosus-1a_M_contig94.17449.1|Name=mRNA_E-siliculosus-1a_M_contig94.17449.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=346bp
MREEQALLAGLVAVCAVSAAALVRLVAVLRIFRRHRQQQQSFTNGNLGRE
EERRHLQATDADRVASSRVIVPSLLFHVLVFLCLAVEVPVYACRWLSSSG
IAVGLVQGDRSLYALHMTSYLLLFMAFSVVVTLWNDVAVFEPNECTALMN
RSMVALCVCYVLVTGIAVSVCLGVGNVKNFLSSFAFLLFCAYSIAVLLLL
GASFLVLGCLLQQRICRVLVTGSCTARLTARIVRLNVVMLACFTCFTMRA
LMLAGLIQAQAEGEESGNYASGWKRREQDMRLEWALHVIPCVAMLYLMRK
AGEPSSSSSSTATTPAGKDYGGDERTGFSGAVVEDGYGGGGGYTG*
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