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Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17444.1 vs. uniprot
Match: D8LN12_ECTSI (Protein YIPF n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN12_ECTSI) HSP 1 Score: 391 bits (1005), Expect = 1.120e-130 Identity = 206/209 (98.56%), Postives = 208/209 (99.52%), Query Frame = 2
Query: 56 MAEAMAMAEFDGGIGMQTAERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVICLVLSLFNLMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH 682
MAEAMAMAEFDGGIGMQTAERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAV+CL+LSLFN MNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH
Sbjct: 1 MAEAMAMAEFDGGIGMQTAERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH 209
BLAST of mRNA_E-siliculosus-1a_M_contig94.17444.1 vs. uniprot
Match: A0A7S1UDR8_9STRA (Protein YIPF n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDR8_9STRA) HSP 1 Score: 265 bits (676), Expect = 1.210e-81 Identity = 136/190 (71.58%), Postives = 163/190 (85.79%), Query Frame = 2
Query: 110 AERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVICLVLSLFNLMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 679
A+ +M TLDEPVSETIMRDLR V KLK+VL PR DQ+GV+ KLKDWDLWGPL+VCLTLS++LSV+AP Q ALVFA+VF V+WCGAA+VTLNAQLLGGTISFFQSVCVLGYCVFPL ++A++C+ LSL L ++ VR VV++GFVWATRAS VFI++II ERK+LAVYPVFFFYTF+SWMI++
Sbjct: 2 ADNMVTAMPTTLDEPVSETIMRDLRQVADKLKVVLLPREDQEGVVQKLKDWDLWGPLLVCLTLSLLLSVTAPESQKALVFASVFFVIWCGAAVVTLNAQLLGGTISFFQSVCVLGYCVFPLTIAAIVCVFLSLIGLGHIAVRCIVVVLGFVWATRASVVFIAKIIKAERKILAVYPVFFFYTFLSWMILL 191
BLAST of mRNA_E-siliculosus-1a_M_contig94.17444.1 vs. uniprot
Match: A0A836CPM4_9STRA (Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPM4_9STRA) HSP 1 Score: 258 bits (658), Expect = 7.900e-79 Identity = 136/201 (67.66%), Postives = 167/201 (83.08%), Query Frame = 2
Query: 83 FDGGIGMQTAERTPQSMM--NTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVICLVLSLFNLMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 679
+DG +G P +M NTLDEPVSETIMRDLR VG+KLKIVL P+GDQ+GVL KLK+WDLWGPL+VCL LSI+LS +APA+QGALVFA+VFVVVWCGAA+VT+NAQLLGG ISFFQSVCVLGYCVFPL++++ CL+ + F+R +V+VGF+W+TRAS VFI +IIS ERK+LAVYPVFFFY F+SWM+++
Sbjct: 7 YDGRLG-----GAPGNMAYYNTLDEPVSETIMRDLRQVGSKLKIVLMPKGDQEGVLKKLKEWDLWGPLLVCLVLSIMLSSTAPANQGALVFASVFVVVWCGAAMVTVNAQLLGGGISFFQSVCVLGYCVFPLVLASAACLIAKALTGLF-FIRALLVVVGFMWSTRASVVFIKQIISPERKVLAVYPVFFFYAFLSWMVLL 201
BLAST of mRNA_E-siliculosus-1a_M_contig94.17444.1 vs. uniprot
Match: A0A7S2V1N2_9STRA (Protein YIPF n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1N2_9STRA) HSP 1 Score: 256 bits (654), Expect = 2.800e-78 Identity = 135/180 (75.00%), Postives = 156/180 (86.67%), Query Frame = 2
Query: 140 TLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVICLVLSLFNLMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 679
TLDEPVSETIMRDL+ V KLK+VL PR +Q GVL KLK+WDLWGPLMVCLTLS++L +APADQ ALVFAAVFVVVW GAA+VTLNAQLLGGTISFFQSVCVLGYCVFPL V A++ L++ L N+FV++ +V +GF WATRAS VFI++IIS +RK+LAVYPVFFFYTFISWMIVI
Sbjct: 19 TLDEPVSETIMRDLKQVYGKLKVVLLPRENQQGVLHKLKEWDLWGPLMVCLTLSMLLCATAPADQTALVFAAVFVVVWVGAAIVTLNAQLLGGTISFFQSVCVLGYCVFPLTVVALVLLLVRLLIFNNIFVKLVLVAIGFAWATRASVVFIAQIISPQRKILAVYPVFFFYTFISWMIVI 198
BLAST of mRNA_E-siliculosus-1a_M_contig94.17444.1 vs. uniprot
Match: I2CPI6_NANGC (Protein YIPF n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPI6_NANGC) HSP 1 Score: 235 bits (600), Expect = 3.450e-70 Identity = 120/180 (66.67%), Postives = 154/180 (85.56%), Query Frame = 2
Query: 140 TLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVICLVLSLFNLMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 679
TLDEPV +T+ RDL VG+KL++VL PR +QDGVL KLKDWDLWGPL+VCLTLSI+LS++AP +QGALVFAAVF VVW GAA+VT+NAQLLGGTISFFQS+C+LGYCVFPL ++A+ L++ L ++ V+ VV VGF WATRAS VFI ++I+ ERK+LA++PVFFFYTF++W+++I
Sbjct: 28 TLDEPVWQTVKRDLTQVGSKLQVVLLPRENQDGVLKKLKDWDLWGPLLVCLTLSILLSITAPEEQGALVFAAVFFVVWFGAAVVTMNAQLLGGTISFFQSLCILGYCVFPLDIAALANLLIGL-AFQSLVVKAVVVAVGFAWATRASVVFIGQVIAPERKVLALFPVFFFYTFLAWLVLI 206
BLAST of mRNA_E-siliculosus-1a_M_contig94.17444.1 vs. uniprot
Match: A0A1V9Z1I2_9STRA (Protein YIPF n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1I2_9STRA) HSP 1 Score: 225 bits (574), Expect = 1.550e-66 Identity = 113/183 (61.75%), Postives = 149/183 (81.42%), Query Frame = 2
Query: 131 MMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVICLVLSLFNLMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 679
++NTLDEPVSETIMRD+R VG+KLK+VL P+ D L L+DWDLWGPLMVCLTLSI+LS++AP +Q A+VF +VFVVVW GAA+VT+NAQLLG TISFFQS+CVLGYCVFPL+++ + C + + + +V +R+ V +GF+W+TRAS VF+S+++ ++K L VYPV FY FISWMI+I
Sbjct: 13 VVNTLDEPVSETIMRDVRLVGSKLKVVLAPKNTSDETLQALRDWDLWGPLMVCLTLSIMLSMTAPTNQSAMVFTSVFVVVWVGAAVVTINAQLLGSTISFFQSICVLGYCVFPLVIATIACFLTRVVS-SHVAIRLVFVGIGFIWSTRASVVFMSQLVPPKKKALTVYPVLLFYIFISWMILI 194
BLAST of mRNA_E-siliculosus-1a_M_contig94.17444.1 vs. uniprot
Match: F0Y2B8_AURAN (Protein YIPF n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2B8_AURAN) HSP 1 Score: 225 bits (573), Expect = 1.960e-66 Identity = 124/180 (68.89%), Postives = 144/180 (80.00%), Query Frame = 2
Query: 140 TLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVICLVLSLFNLMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 679
TLDEPV ETIMRDLR VGAKLK+V+ PR Q+GVL +LK+WDLWGPL VCL LSIVLSVSAP Q ALVFAAVFVVVW GAA+VTLNAQLLGG ISFFQSVC+LGY +FPL V A++CLVL ++ +R VV V F W+TR S VF EII +R+ LA+YPVF FY+FI+WMI+I
Sbjct: 12 TLDEPVRETIMRDLREVGAKLKLVILPRVSQEGVLDRLKEWDLWGPLAVCLALSIVLSVSAPEAQRALVFAAVFVVVWVGAAIVTLNAQLLGGRISFFQSVCILGYSIFPLNVGALLCLVLHPVT-KSLLLRALVVGVCFAWSTRVSVVFFGEIIEAKRRALAIYPVFGFYSFIAWMILI 190
BLAST of mRNA_E-siliculosus-1a_M_contig94.17444.1 vs. uniprot
Match: A0A485KII9_9STRA (Protein YIPF n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KII9_9STRA) HSP 1 Score: 225 bits (573), Expect = 2.550e-66 Identity = 113/185 (61.08%), Postives = 147/185 (79.46%), Query Frame = 2
Query: 125 QSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVICLVLSLFNLMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 679
Q TLDEPVSETI+RD+R VG+KLK+VL P+ D L L+DWDLWGPL+VCL LSI+LS++AP +Q A+VF VFVVVW GAA+VT+NAQLLG TISFFQS+CVLGYCVFPL+++ ++ V L +L +V VR+ +V VGF+W+TRAS VF+S+++ +R+ L VYPV FY FI+WMI+I
Sbjct: 15 QKKETTLDEPVSETILRDVRLVGSKLKVVLMPKNTSDQTLQALRDWDLWGPLLVCLVLSIMLSITAPTNQSAMVFTGVFVVVWAGAAVVTVNAQLLGSTISFFQSICVLGYCVFPLVIATLVNTVFRLASLGHVAVRIVIVAVGFIWSTRASVVFMSQLVPPKRQALTVYPVLLFYLFIAWMILI 199
BLAST of mRNA_E-siliculosus-1a_M_contig94.17444.1 vs. uniprot
Match: A0A067CCZ0_SAPPC (Protein YIPF n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CCZ0_SAPPC) HSP 1 Score: 224 bits (570), Expect = 5.970e-66 Identity = 115/181 (63.54%), Postives = 148/181 (81.77%), Query Frame = 2
Query: 137 NTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVICLVLSLFNLMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 679
NTLDEPVSETI+RD+R VG+KLK+VL PR D L L+DWDLWGPLMVCL LSI+LS++APA+Q A+VF +VFVVVW GAA+VT+NAQLLG TISFFQS+CVLGYCVFPL+++ + C + + + +V +R+ +V VGFVW+TRAS VF+S+++ ++K L VYPV FY FISWMI+I
Sbjct: 15 NTLDEPVSETILRDVRLVGSKLKVVLMPRNTSDETLQALRDWDLWGPLMVCLMLSILLSLTAPANQSAMVFTSVFVVVWVGAAVVTVNAQLLGSTISFFQSICVLGYCVFPLVIATLACFLTRVVS-SHVTIRLILVGVGFVWSTRASVVFMSQLVPPKKKALTVYPVLLFYIFISWMILI 194
BLAST of mRNA_E-siliculosus-1a_M_contig94.17444.1 vs. uniprot
Match: A0A8J2SB60_9STRA (Protein YIPF n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SB60_9STRA) HSP 1 Score: 220 bits (561), Expect = 1.210e-64 Identity = 122/180 (67.78%), Postives = 138/180 (76.67%), Query Frame = 2
Query: 140 TLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVICLVLSLFNLMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 679
TLDEPVSETI RDLR VGAKLK+VL PR Q GVL +LK+WDLWGPL VCLTLSI LS AP Q ALVFAAVFVVVW GAA+VTLNAQLLGG ISFFQSVCVLGY +FPL A CL+L + +R+AVV F W+TR S VF SEII +R+ LA+YPVF FY F++WMI+I
Sbjct: 13 TLDEPVSETIRRDLREVGAKLKLVLLPRASQHGVLDRLKEWDLWGPLAVCLTLSIALSAGAPESQRALVFAAVFVVVWAGAAIVTLNAQLLGGRISFFQSVCVLGYSIFPLDCGAFACLLLHALT-RSFLLRLAVVGTCFAWSTRVSVVFFSEIIEAKRRALAIYPVFGFYAFLAWMILI 191
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 630 |
| Model size | 1916 |
| Exons | 6 |
| Ec32 ortholog | Ec-27_000980.1 |
| Ec32 ortholog description | terbinafine resistance locus protein (yip1) |
| Hectar predicted targeting category | other localisation |
| Best eggNOG OG | NA|NA|NA |
| Best tax level | Eukaryota |
| COG Functional cat. | U |
| EggNOG OGs | COG5080@1,KOG2946@2759 |
| EggNOG free text desc. | intestinal epithelial cell development |
| GOs | GO:0000138,GO:0002064,GO:0002065,GO:0002066,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005795,GO:0005797,GO:0005798,GO:0005801,GO:0005802,GO:0007275,GO:0008150,GO:0009888,GO:0009987,GO:0012505,GO:0030134,GO:0030135,GO:0030154,GO:0030855,GO:0031410,GO:0031982,GO:0031984,GO:0031985,GO:0032501,GO:0032502,GO:0035295,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0048468,GO:0048565,GO:0048731,GO:0048856,GO:0048869,GO:0055123,GO:0060429,GO:0060575,GO:0060576,GO:0097708,GO:0098791 |
| Preferred name | YIPF6 |
| Seed eggNOG ortholog | 2880.D8LN12 |
| Seed ortholog evalue | 2.1e-106 |
| Seed ortholog score | 391.7 |
| Taxonomic scope | Eukaryota |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936504.0371277-UTR-E-siliculosus-1a_M_contig94:504780..506011 | 1622936504.0371277-UTR-E-siliculosus-1a_M_contig94:504780..506011 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig94 504781..506011 - |
| 1696251107.9571087-UTR-E-siliculosus-1a_M_contig94:504780..506011 | 1696251107.9571087-UTR-E-siliculosus-1a_M_contig94:504780..506011 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig94 504781..506011 - |
| 1622936504.2207377-UTR-E-siliculosus-1a_M_contig94:513180..513235 | 1622936504.2207377-UTR-E-siliculosus-1a_M_contig94:513180..513235 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig94 513181..513235 - |
| 1696251108.0370169-UTR-E-siliculosus-1a_M_contig94:513180..513235 | 1696251108.0370169-UTR-E-siliculosus-1a_M_contig94:513180..513235 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig94 513181..513235 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936504.0583584-CDS-E-siliculosus-1a_M_contig94:506011..506121 | 1622936504.0583584-CDS-E-siliculosus-1a_M_contig94:506011..506121 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 506012..506121 - |
| 1696251107.9761066-CDS-E-siliculosus-1a_M_contig94:506011..506121 | 1696251107.9761066-CDS-E-siliculosus-1a_M_contig94:506011..506121 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 506012..506121 - |
| 1622936504.1089253-CDS-E-siliculosus-1a_M_contig94:508072..508224 | 1622936504.1089253-CDS-E-siliculosus-1a_M_contig94:508072..508224 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 508073..508224 - |
| 1696251107.9878092-CDS-E-siliculosus-1a_M_contig94:508072..508224 | 1696251107.9878092-CDS-E-siliculosus-1a_M_contig94:508072..508224 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 508073..508224 - |
| 1622936504.1525154-CDS-E-siliculosus-1a_M_contig94:509173..509336 | 1622936504.1525154-CDS-E-siliculosus-1a_M_contig94:509173..509336 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 509174..509336 - |
| 1696251107.9978523-CDS-E-siliculosus-1a_M_contig94:509173..509336 | 1696251107.9978523-CDS-E-siliculosus-1a_M_contig94:509173..509336 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 509174..509336 - |
| 1622936504.1656556-CDS-E-siliculosus-1a_M_contig94:510376..510467 | 1622936504.1656556-CDS-E-siliculosus-1a_M_contig94:510376..510467 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 510377..510467 - |
| 1696251108.0077708-CDS-E-siliculosus-1a_M_contig94:510376..510467 | 1696251108.0077708-CDS-E-siliculosus-1a_M_contig94:510376..510467 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 510377..510467 - |
| 1622936504.1824806-CDS-E-siliculosus-1a_M_contig94:511922..511993 | 1622936504.1824806-CDS-E-siliculosus-1a_M_contig94:511922..511993 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 511923..511993 - |
| 1696251108.017843-CDS-E-siliculosus-1a_M_contig94:511922..511993 | 1696251108.017843-CDS-E-siliculosus-1a_M_contig94:511922..511993 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 511923..511993 - |
| 1622936504.2030573-CDS-E-siliculosus-1a_M_contig94:513137..513180 | 1622936504.2030573-CDS-E-siliculosus-1a_M_contig94:513137..513180 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 513138..513180 - |
| 1696251108.027834-CDS-E-siliculosus-1a_M_contig94:513137..513180 | 1696251108.027834-CDS-E-siliculosus-1a_M_contig94:513137..513180 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 513138..513180 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig94.17444.1 >prot_E-siliculosus-1a_M_contig94.17444.1 ID=prot_E-siliculosus-1a_M_contig94.17444.1|Name=mRNA_E-siliculosus-1a_M_contig94.17444.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=210bp
MAEAMAMAEFDGGIGMQTAERTPQSMMNTLDEPVSETIMRDLRSVGAKLK
IVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAA
VFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVICLVLS
LFNLMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYT
FISWMIVIH* back to topmRNA from alignment at E-siliculosus-1a_M_contig94:504781..513235- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig94.17444.1 ID=mRNA_E-siliculosus-1a_M_contig94.17444.1|Name=mRNA_E-siliculosus-1a_M_contig94.17444.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8455bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:504781..513235- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTGCGCATACGACACAGAGAAAAAAACTCTAGCAGGGGAGCGTGCGCAAG
CGAAGATGGCGGAAGCTATGGCAATGGCAGAGTTTGATGGTGGCATCGGT
GAGTGAAACCTGTTTGTTCCAATTAATAGCATCTACTGCGGCATATCTGG
AGTGAAGAACAGCGTGTGTTGGGACTTACCGCAGTCTATGCCATGGCCCA
AGAGTTGCGCGAGGGTCAAGCGAGAGAGAGGGAGAGAGCAGAGAGGGCTT
GTGTGGTAGATTGCGTTACAAGCGCATGCATGTGCTCACACTTTGTTTCG
TGCTCTCTAAGGCGTGTGTGCAGAATTTTGAACCGGACATTTTCCGGACA
GAGGTTTGCGGACAGAGGCAGCATACCAAAGCGGGTCGTTACACAGCAGA
GCCTTGGCTCTGAGGGCACGACCAACACACGCGAGGTCACGCAGCCGCAC
AACCCGATAGATAACAGTTTTAAAACTCCAACACAGTTGATGGACCTGCG
AGCTCTTGGGGCTCTGCTCTTGGAGCATTGGAATTGCTATAGACACAAGA
ACAGCGCTGAATAGCGCGAAGCAACCGACTGACAGCACTTAGGGTGACCG
CCGAGCTTACCGCGGGCGAGTGAGTTCTCTGCAGTGCTTGCTGCACATGA
CTTTCGGCTATTGTACATCCGGCGGTGGGACGTTTTTGTTACGCTAGTTT
GAACAAAGAGCCTGCGGCGTATCTATGTTGCGTACATCAGAGTGCGGCCG
GCTGTACTTGTACCAAGCGTGAGACCCAACCGACCGAGCTTTTAAGAGTC
AGAAACTCTCTTAGGACAGTCGTGTGTCCTGCTTCGTCTCACGTGTCAGC
AGCTTCGCACCCTACGATCGATACCGCCGTGTGCAGCGCAGCACCGCCGT
TCAAAGTGGATGTTATGTATAAGATACTAGCATTTACCTCGGAAAGAAAA
CCGCGGCAGAACCCTATGTAAATTTACCGTCCGTAGCTTGTGTTGTTGGT
CGTATGCATAGGTATGCGTATGTAGCCACGTCGCAACGACTACGGTAGAT
AGTGTAGACCTACGCCTGCGACACATAAACGTGATCAACTAACTGGAGCC
CATCTTGACATGTATACGCACTTGTTGTGGAGTGTTGCGGGAACATGTTT
GGGACATGGCAGGCTTTGTTGAATCCCCCACCCCCCTTTTCGCTCCTCGC
CTCCTTTTCGCACGCTCTTCGCCTCCTTTTTTTCGCACGCAGGTATGCAA
ACAGCAGAACGAACACCGCAGAGCATGATGAACACGTTGGATGAGCCAGT
CTCCGAAACCATTGTGAGAGTCACAGCATTGAAATAGTTCACGCTTGGTC
TTTCCCGTAACCTCTTCTCGGGGTGTGCTTTAGCGAGGGTCCCCGAATAA
CGCGGTCTGGATGTGCAGGTCGTCCTTTTTGTGTGTGGCTGGTGAAAGTG
ACTGGCATAGCCGGAACAATCAAGTTGTTCTACACATTGAATACGGCATC
TGCCCCATTGCAAGGCGACCATTTTCAGCTGCCCCACCACCGCCTTATTC
GTGGACACCTCGCTGTACTGTAAGTCAGCCTGCACCAACCAACGATTTGG
TCATTGCACTTGTTTCTGCAGTCTCCACGCCTGCCCATCGTGCATGCCCT
ACGGCCTTAGCAACCGCTATCACACCATGGGACCAGTCATGGCTGGCTGG
TTTAGTTTCGGTTGGTAAAGGCTTGGCTGCGGGTACGATCGCATTATTGT
ACTCGCATGCGGACGGTCCACGATCTACGCATGTGCCACAATGGTATTGG
CATGATGTTGCGCTCTATACACCCTATAGGGCCGGGGAGAGTTCACCGTA
AGAAAGGGGATGGCCAGTTTTCGGGAGGGTGTACTCATAGCCGTGCAATT
TTCGGAGTGGGGGTAGGGGGACCCCACGGTAGGGTTGAGGCCCGCCGGTT
ACCCGGGTTATCCGGATACCCGGCCTACCCGGGTACCCGGCTATTTTCCG
GAGGTGAGGCCCGAACCCGGTTTGGGTATTTTGAGAGCGGGCATGCCCGC
CGGGTAGACGGGTACCCGTCCAACGGACCTCAACCCTACCCCACGGACAG
CTATCTACAACTGTGTTTGATTGTGTTCGCGTTGTTTTTTCCCAGCAGAT
CGCGCTGACGTCGTGTGGGCCGTGTTGTTACGAGGCATACATTTCATTCC
GTGGCATGGTGTATTTTCGAGGGAAGCAGGAATACGCCGTTCCGGACATA
TTTTCACATTTTTTTTGGAAGACACGGGCTGTGGTGCGCCAACAGTTGAC
AACCATGTGTTTGCCCCCTCGTTGTTTCGAACGAGTCATTTGTGGTTCCG
AAACGAAAGAGCTCAAAGCGGTGCGGAGGCGGCTTAGCCACTTTTGAGGG
AGGTAGACGCTCGACCGCACTCCCTTCGGGCTGTGCAGCATCCGTTCGCA
ACGCGGAAGAGCTGAGGTGTTCGCTTGGGTGAGGCACTATTCATGGTGTG
AAGCCAACGAAGAAACAGGATTCAACCAGCAACAACCCACCACCACTACC
ACCACAACAACAACAGAAATAAGAGCGACTCACAACCAAACCTGTGCAAC
ATCTGTTCGCAACGCGGAAGAGCTGAGGTGTTCGCCTGGGGGAGGCACTA
TTCACCGTGCGAAGCCAACCAAGAATACAGGATTAAACCAACCCACCAAC
AACAGAAACAACAGCGACTCAACAACCAAACCTCTTTTCCCTTTGTCACC
ATCGGCGGTCGCTTTCAGATGCGAGACTTGCGATCCGTGGGAGCTAAGCT
AAAGATCGTTCTCAACCCCAGGGGGGACCAAGACGGGGTGCTCACCAAGC
TCAAGGACTGTGAGTGCCGTGTTAGCCTGCCTTTGAACTCACAAGGCCCC
TCTGATTGTTTTTCGGACTATCGTGCCTACCCTCAGCCCGCAACAGCCCA
CGTTCATACCCGGACACGGTAGCATGGCCTCATAATTGTGCGGCAGCACA
GCCCTTGGGGGGGGGGGTGCCGCTTGAGCCAATCTTCCCCTCGCCGTGTC
GCGAAATTGGCTGGGTCGCATGGGGTGGTGCGGTTGCTTGCAGGTTTGGC
GCGTCGAGCTACTAGTTCTTCTCTTCTCTCTCGGAAATCACTTTCTATCT
CGATCATAGACTCTTTGCGTGTCTGATGTACCCTGATGTCGTGATTGCCT
CGGGGTGCCTTGCCCTGTATCCGAAAATGTCCCGCCGAATGATAGAGCGA
GCGTGCCCAACGAAGGTGGCACATCGTGTTATCATCAGGTATTTTTGTTG
TGTTCAAATGAACCCAGAGGGTCAATTCGATCGGCCGCTTTTATAGATCT
ATGTTGTGTTGTCTCGTCAAGATTTGTTTCGACCCCTTTCGTTAGGAGTG
GCCTCCATGGTAAAGATGCCAGGAACTGTGCTACGATCGGTGAGAATTTT
TGCCGGCGGTCTCGACGGAGGGAAGGGCAAAAACATTGAGTGAGTAAGTG
ATTGAGTGACCCCCCCTGCTGGATGATCGGCCAAAACCGGATACTCCCAG
TGCCCTGGCTGTTGAACAGTGAACAGTGCGGGCATATGCATACCGTATAT
GACACAAGATAACACACCCCCTTGACCGATTTTCAAAGCTCGATTTCTCA
ACAGCAGGAAGACTCACAGCGCCGAAAACGGCGGCGTTGGAACCGACTCG
TTGAGAGCTTTTCGAAAATGTATCATTTCGTTTATGTATCCTCTTCGTCG
TCGAGTAATCGAGTTTTGAAAATCGGGCCAGGGGGTGTGTTATCTTGTGT
CATATACGGTACTTACGGCGGCACGCCCCGGCGCGGTCTGGTGCACGATA
CTGACCGCCACCGCTCCCCCCCAAAAAAACTGCGCTCTTTCGTCGCCAGG
GGACTTGTGGGGACCGCTGATGGTGTGCCTGACGCTGTCGATCGTTCTGA
GCGTTTCGGCCCCAGCGGACCAGGGAGCGTTAGTGTTCGCGGCGGTTTTT
GTCGTGGTATGGTGTGGGGCGGCCCTGGTGACACTCAATGCTCAGCTGCT
GGGGGGAACAATGTGAGTTGTACGAGGGATGGGACGAAATGACATAAAAT
GCAGACAAAGAGAGATAGGGTAGGTGGAGGGAAAGACTGAAGCTAGAGAG
AGAGAGGGGGGGGACGGTAGATGGACGGAGAGATCGAGGTTTTTACGAGA
ACAAGAGACGCAAAGAGTGAGCAGAAACACCCAAGGAGCTTGAATACCGA
AGTACAAGACACATGGATAGAGAGAGGGCGGCAAACACATCCGGCCTATT
TTTGGTAGAGAGATGTGAGTAGCGAAAAGCAGCACAGCGCCATGTCCAGG
AAAGAAGGTGCGGCGAACGCAAATACTCGGCGAACAACAGCAGCTATTTG
GTCCAGAGGGCTATGTATGTCCTCAGCATACCTGGTGTGTGCAGTGTTCG
CAGCTGTACATTATCCGTGGTGGTTATACTGAAGATTGGGGCGGAACGGA
GCCTTGATTGGCACGTCGTACCGCGCAGTTCTTTTGGAGAGGGGAGGCGC
CGCGTGAGAGGAGATGCTCATTGTATCAGGGTACAACACCCCGTGTCCCC
CCCCGGGTCTCTACTGTGTGGCCGTTTGCGCAATTGGCCACGACAAGGAA
GAGGCGGCCGGGCAACTATATACAACACGAGTAATTGCGCAGCCGCAGCA
TACTACTGTTGGATCATTTCGCCAGCAGCTCGTTTGGAGCCGGGGGGGGG
GGATGACGTCGAAGAGGGGCAAAGCGGTGGGTGGGTGGGAACAGCTGACT
GATTGACTTGGTGGAGCTGTGGGCATCGGTGGCATAACGAACGATAAGTT
GGAAGGACGGTCGGTAGTGGTGCAGGGGAGACTGTTCCACCGTCGACCAA
AAAACAAATACTTCGTGATGAGCTTTGCATGTCTTGTGGACCATGTTTTG
TGAAACAGGCGCCAGACTCCTCGTCATATACCCCCGTTCCCCCCGCCGCC
CGCGTGCGCAGCTCCTTCTTCCAGAGCGTGTGCGTGCTGGGTTACTGCGT
GTTCCCGCTGCTGGTGTCGGCGGTGATCTGCCTCGTCCTGAGCCTCTTTA
ATTTGATGAACGTCTTCGTACGTGTGGCCGTTGTGCTGGTAGGCTTCGTC
TGGGCAACCCGAGGTATGCATGCGTCCTGCGCGTTGCGTCCATCATCTCT
CAGCGCGTGTGCGCGAAATAGTTAAAAAAGACATTGTGGGCACCGAGTAT
GTCCGCGAGTCTTGCTCGCCTGCTGTGTGTGTGTGTACTCCGTGTGTTGA
TTCAGTTGGCGTCGATCGCGCTCCCGGGCCGAGCGCCGAGCATACGCCTT
GTCTGGTCGGAGGGGGTGTACTCATAGTCGTGCATGCCGTAGTCGTTAGA
CCATTGACCTCGCATCCCTACAAAGCCGGGACGGAGCACGCCGGGTTCTC
ACCGGACCAGGCTCTCACATCACCAAGCGCGAAGCGCCGTGAGGTATTCG
GCGAGTCGCATGAAGGGTGAGCTGCATCCTGCTAAGGGTGTTCGGCATCT
TGTGCTTACTTTCTTGCGTACGGATGACAGCTGCGTATGACTTAGTTTGT
TTTCTGGTGCTTTCACTTCCAGACACAGTTGTAAGCATTGTGTAACTGTC
TCGAGGATGCTTTACCATTTTAACACAACGTGGTGCGATCATCCCCCTTG
CGCGGAGTGAGGGTTCTCCACTCCACACAACATGATCTACTCGACCACCA
TTATGGTTACCGCCAAAAAAAAAACCAGACGTAAAAAAAAAAACGGTAAC
CTGGTTGCCGTGGTCGGAGGGGGGGGGGGGTACTCATAGTCGTGCATGCC
GTAGTCGTTAGACCATTGACCTCGCATCCCTACAAAGCCGGGACGGAGTA
CGCCGGGTTCTCACCGGACCAGGCTCTCACATCACCAAGCGCGAAGCGCC
GTGAGGTATTCGGCGAGTCGCACGAAGGGTGCGCCGCATCCTGCTAAGGG
TCGGAGGGGGGTGGTCGTATTGTGCGTGGCCCCTTGGTGGTTGCTTGCTG
GTAGGCTCGCGTTGTCTGGGGAACCGAAGTGCCAGCCTATCTTGACTTGT
TGATTCGCCGCGCACATGACGCGGGATGCTCCAGAGGTATTGCGTGCGGA
TGTGGGACGATCACACACCGGTGACTGCTTTGTGGGCTTTGTGGAGGGGC
AACACCGTGCAGCACCTTTGAAGGCGCTCGTGGTCTGTGTTCTTGACTTG
TTTTTTGTGGAATGGAAATCCCCATAACACTGACTCGAAGACGCACATGG
GTTCATTCCACTGTTACCCCCTCATTCCCTGGCGGTAACACGTCCGTCTG
TCCCGTTGTATGTGGTTTTACTGTTAACACCGTCCATCTGACGTTCCGAA
AGCGTTCCCTTGGGTAGTAGTCGCGGCGGAGAGTCTGCAAGGCGACTTGG
TTTGGTTTTGTCTTGATCTCTCGAGCTGACTCCCCTAACAATTCAGGGGT
GACGACTGCCTAAAATCAAGCACCATGTGTCCATGGTATGATTTTTCTCC
GCCGAAGAGCGCTCAAATCGACACGCAGAACGCCTTATTTATGTTTTTTT
CCCTCTTCCACCGCACTTTCTTCCGCGAGTACTCGAGACAGCCGTGTCTT
TTTTCTGGATTTCGATTCTCAATATTGTTTCAAATCAAACAAAGTGTTTG
TTGCCTGCGAGCCAGTCCCCGACCCCTCTCTCTTCTCACGAAGGAAGGGA
ATTTACATAAAAGAAATTGCTTGAGTTCATCTCAGACATCGTTGCAAAGC
CCCACACGCTATCATGTGTCGTTTCTGTTGGCCATCCTGTCGTCGCTTGT
GTTATGCTCTTTGTCGCACACAAGCATGCTTTGCTCTGTTTTCTGCGCCC
CGCCCCGACCCCGAAGCGGGGGGTTCGTGAAGTTTTTATGTTTGTTCTTG
CCTCCCTACAACCGTTGTGTTTCTCCGACTCTATTTTGCTTGCCGAGTTC
CTTTTGCTACTCCCCCCTCTACTTCTCCTAAGCCATTGACCAACGACATG
ACATACCTCCTTGTTTTGCGTTTCTGTTGCGGGTCTCTGTTCGTTACCTT
GCTCCCAATGACAGCGTCGAAGGTGTTCATCTCGGAGATCATCTCAGACG
AGCGCAAGATGCTGGCCGTGTACCCAGTGTTCTTCTTCTACACCTTCATC
AGTTGGATGATTGTTATACACTGAAGATGTGATCTGACGAATTTTTCGTT
CGCTCTCTCTCGGACTGCGGCAGTGTGCAATGTTCGCCCGTGGTTGTATC
ATCGACCGGTCGCTTGTCTTGCAACACCACCTCAGAGACATGGCGTGCGA
CGGTAGAGCAGACTGAGGGGAGGGTGACAGTGGAACGTCTGGAACCCCTG
AACCGGTGAATGTGAAGACGATCGTTGTGGCTCAACTCTTTTTTCGTCGA
ATCACTGTGTTGCAGTGCGGGGAGGGTTGCACATGTTAGTTTAACCCATG
GTCGCCCAGCATTTCCGCACGGGGCAACCCTCTCCATACTGCTATTTTCA
TGGTAGAGGCACCTCTTGGGCGCGCCTTTACGATAGCGTGACGGGACCGT
GCATCTGGGTGTCTGTACGACACCTGCCTGCGCACCAGCGCGTGGTGTTT
TCGTTTGTTGTTCTCGGTCTCGGGGGTATGTTGATTTCCGTTGTCGTAGA
CGTTGTGTCTATTCTATAGCGTGTGTTTGTGTTTGTGCCACTGCTGTGTG
TTGCATACTTCTTGATATTCCGCTGATTTGAGAGCGTAGTTTAAGGGACA
CACGTTCGGGTGGTTAGGGGAGGGGCAAGGCGAGAGGTGGCTCGTCGCAT
CGCTCCGGATAATGAATGAACGCAATACGTTTCACGTAATTAATGAATGA
ACGCTATACGTTTCACGTAAACGTTTCGCGTGGTTGAAACGCTGCTCTAC
AACGACGCCGGTGCTGTTCTCTGCTTCGCTCCGTCACCTGTACCGTATAT
GCGCAGCAGAGAGAGGGTTGGGAAGCATTTCGTGAAGTCTACTTCCCGAC
CGAAGACTAAATCTTTTTTTTGCTACTTGAAACGATGTTCCCGCGGTAGA
TCAAGAGTCGGCGACATCTTTAACCCGTGGACTTGCGTTTTGTACGAGCC
GTGGATATCGTCGCCTCAAATGATTCCACGTTGGCAAAGGTTTTTAGTTT
CGTGCGTCGTCAAAGTAACACATTCGTTTTCTTGCTAGGCAGAAATGGGA
GGTGTTTGTTCACTCAAGAGCTGGAAGGGGTGGATGAGACATTGCACCGA
CCGGTGAAGCACACGCACGCAGGACATTGGCGATGGACGGAGACTTCGTC
TGAGTGAGCTAGGTCCGTTCTCCTTACCTACATAGTCGTCTGCACGCGCA
CCAGAGAGGCTTGACGAGAGGGTCCGAGAGAAGAGAGAGAGAGAAATCGA
AACCC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:504781..513235- >mRNA_E-siliculosus-1a_M_contig94.17444.1 ID=mRNA_E-siliculosus-1a_M_contig94.17444.1|Name=mRNA_E-siliculosus-1a_M_contig94.17444.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1260bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:504781..513235- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCGGAAGCTATGGCAATGGCAGAGTTTGATGGTGGCATCGATGGCGG
AAGCTATGGCAATGGCAGAGTTTGATGGTGGCATCGGTATGCAAACAGCA
GAACGAACACCGCAGAGCATGATGAACACGTTGGATGAGCCAGTCTCCGA
AACCATTGTATGCAAACAGCAGAACGAACACCGCAGAGCATGATGAACAC
GTTGGATGAGCCAGTCTCCGAAACCATTATGCGAGACTTGCGATCCGTGG
GAGCTAAGCTAAAGATCGTTCTCAACCCCAGGGGGGACCAAGACGGGGTG
CTCACCAAGCTCAAGGACTATGCGAGACTTGCGATCCGTGGGAGCTAAGC
TAAAGATCGTTCTCAACCCCAGGGGGGACCAAGACGGGGTGCTCACCAAG
CTCAAGGACTGGGACTTGTGGGGACCGCTGATGGTGTGCCTGACGCTGTC
GATCGTTCTGAGCGTTTCGGCCCCAGCGGACCAGGGAGCGTTAGTGTTCG
CGGCGGTTTTTGTCGTGGTATGGTGTGGGGCGGCCCTGGTGACACTCAAT
GCTCAGCTGCTGGGGGGAACAATGGGACTTGTGGGGACCGCTGATGGTGT
GCCTGACGCTGTCGATCGTTCTGAGCGTTTCGGCCCCAGCGGACCAGGGA
GCGTTAGTGTTCGCGGCGGTTTTTGTCGTGGTATGGTGTGGGGCGGCCCT
GGTGACACTCAATGCTCAGCTGCTGGGGGGAACAATCTCCTTCTTCCAGA
GCGTGTGCGTGCTGGGTTACTGCGTGTTCCCGCTGCTGGTGTCGGCGGTG
ATCTGCCTCGTCCTGAGCCTCTTTAATTTGATGAACGTCTTCGTACGTGT
GGCCGTTGTGCTGGTAGGCTTCGTCTGGGCAACCCGAGCTCCTTCTTCCA
GAGCGTGTGCGTGCTGGGTTACTGCGTGTTCCCGCTGCTGGTGTCGGCGG
TGATCTGCCTCGTCCTGAGCCTCTTTAATTTGATGAACGTCTTCGTACGT
GTGGCCGTTGTGCTGGTAGGCTTCGTCTGGGCAACCCGAGCGTCGAAGGT
GTTCATCTCGGAGATCATCTCAGACGAGCGCAAGATGCTGGCCGTGTACC
CAGTGTTCTTCTTCTACACCTTCATCAGTTGGATGATTGTTATACACTGA
CGTCGAAGGTGTTCATCTCGGAGATCATCTCAGACGAGCGCAAGATGCTG
GCCGTGTACCCAGTGTTCTTCTTCTACACCTTCATCAGTTGGATGATTGT
TATACACTGA back to top
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