prot_E-siliculosus-1a_M_contig94.17432.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig94.17432.1
Unique Name	prot_E-siliculosus-1a_M_contig94.17432.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	863

Homology

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17432.1 vs. uniprot
Match: D8LL21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL21_ECTSI)

HSP 1 Score: 1025 bits (2649), Expect = 0.000e+0
Identity = 761/878 (86.67%), Postives = 765/878 (87.13%), Query Frame = 0

Query:    1 MRMENSPGPVEVPPVTPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXPP--GAGMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXGGMRFGXXXXXXXXXXXXXXXXXXXXXXXMMAGARGGMQMXXXXXXXXXXXQHGMGQQMMGMNANHPQQAAAPAPA--AGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQPAGSAPRGEGYGGGGAAGESKKKSDRSRREKGADRPSSDDSKARGGEEKPGRADPAAATAGAKSKDASNDSGAAGXXXXXXXXXXXXXXXXXXEGAPPRPTRGWEKPEVSQQKQRGLSAGSDAGNRGSKATSAKSAGSSAGTDKKSVSAATAPISGDDGVGDSP----AAAFSAGESSEGGGASADGGGRHPTSSGSKGAKAKEGSASGGTDAXXXXXXXXAGNGEDAAKAPEDGKAPAAAPPAASQWGGKKSFL--------DVVKAPGNLPXXXXXXXXXXXXXXXXXSMMGNKAKGGGRIKSPLRGRPEPPSGESRDMKRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGGGSREKGAWA 862
            MRMENSPGPVEVPPVTPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVT DGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXX    GAGMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXX    GMRF XXXXXXXXXXXXXXXXXXX    MMAGARG M  XXXXXXXXXX QHGMGQQMMGMNANHPQQAAAPAPA  AGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQ AGSAPRGEG+GG    GESKKKSDRSRREKGADRPSSDDSKARGGEEKPGRADPA ATAGAKSKDAS DSGA  XXXXXXXXXXXXXXXX  E APPRPTRGWEKPEV+QQKQRGLSAGSDAGNRG KATSAKSAGSSAGTDKKS+SAATAPISGDDGVGDS     AA+FSA  SSEGGG S                             XXXXXXXX       AKAPEDGKA                          DVVKA     XXXXXXXXXXXXXXXXX   GNKAKGGGRIKSPLRGRPEPPSGESRDMKRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGGGSREKGAWA
Sbjct:    1 MRMENSPGPVEVPPVTPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTSDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXXXAGAGMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXX----GMRFXXXXXXXXXXXXXXXXXXXXRGGGMMAGARGXMXXXXXXXXXXXXQQHGMGQQMMGMNANHPQQAAAPAPAPAAGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQQAGSAPRGEGHGGXXXXGESKKKSDRSRREKGADRPSSDDSKARGGEEKPGRADPAVATAGAKSKDASKDSGAXXXXXXXXXXXXXXXXXXAGEWAPPRPTRGWEKPEVTQQKQRGLSAGSDAGNRGGKATSAKSAGSSAGTDKKSISAATAPISGDDGVGDSATAAVAASFSAEGSSEGGGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXAKAPEDGKAAXXXXXXXXXXXXXXXXXXXXXXXXXDVVKAXXXXXXXXXXXXXXXXXXXXXXXXXGNKAKGGGRIKSPLRGRPEPPSGESRDMKRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGGGSREKGAWA 871

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17432.1 vs. uniprot
Match: A0A6H5KRS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS0_9PHAE)

HSP 1 Score: 823 bits (2127), Expect = 1.120e-282
Identity = 709/1171 (60.55%), Postives = 726/1171 (62.00%), Query Frame = 0

Query:    3 MENSPGPVEVPPVTPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----EGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXPPGAGMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXGGMRFGXXXXXXXXXXXXXXXXXXXXXXXMMAGARGGMQMXXXXXXXXXXXQHGMGQQMMGMNANHPQQAA----------------------------------------------------------------------------------------------------------------------------------------APAPAAGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQPAGSAPRGEGYGGGGAAGESKKKSDRSRREKGADRPSSDDSKA--------RGGEE---------------------------------------------------------KPGRADPAAATA--------------------------------------GAKSKDASNDSGAAGXXXXXXXXXXXXXXXXXXEG------------------------------------APPRPTRGWEKPEVSQQKQRGLSAGSDAGNRGSKATSAKSAG------------------------SSAGTDKKSVSAATAPISGDDGVGDSPAAA--FSAGESSEGGGAS--ADGGGRHPTSSGSKGAKAKEGSASGGTDAXXXXXXXXAGNGEDAAKAPEDGKAPAAAPPAAS---QWGGKKSFLDVVKAPGNLPXXXXXXXXXXXXXXXXXSMMGNKAKGGGRIKSPLRGRPEPPSGESRDMKRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGGGSREKGAWA 862
            ME+SPGPVEVP VTPEA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      EGT+PP+VPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPS+TPQEKIR+IFTGDGVAPIKSIRSDVGDTWFVTMESEDDAL TILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAA              P GAGMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXMMAGARGGMQMXXXXXXXXXXXQHGMGQQMMGMNANHPQQ                                                                                                                                          APAPA GGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREH+LAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQ A S PRGEG+G              SRREKG DRPS              RG                                                            KP  A P+A                                          AKS  A + + A  XXXXXXXXXXXXXXXXXX                                      APPRPTRGWEKPEV+QQKQRGLSAGSDAG RG KATSAK+AG                        SSAGT+KKSVSAATAPI       DS AAA  FSA  SSEGGG S  + G G+HPTS                TDA         G+GEDAAKAPE GKA            QWGGKKSFLDVVKAPGNLP      XXXXXXXXXXX   GNKAKGGGR+KSPLRGRPE P GESRD KRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGG SREKGAWA
Sbjct:    1 MESSPGPVEVPRVTPEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTTPPVVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSDTPQEKIRKIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAAAAAAPYGLGAG--PAGAGMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXMMAGARGGMQMXXXXXXXXXXXQHGMGQQMMGMNANHPQQGGGYGGANGGAGAPYSGQHQXXXXXXXXXXXXXXXXKKGDRGNSAQQGXXXXXXXXXXXXXXXXSGGRDMLSAANFPPLPGTDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAASTDDMVTTGEADASSPAADVPEAPAPAPGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHALAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQQAVSVPRGEGHGXXXXXXXXXXXXXXSRREKGTDRPSXXXXXXXXXXXXXXRGKSXXXXXXXXXXXXXPMGAYAAXLLKNPRPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSAKPSAKERKGDKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSAKSPPAKSSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPRPTRGWEKPEVTQQKQRGLSAGSDAGKRGGKATSAKAAGASYGLYIFAASGPAHPHSGEQSVGSSAGTEKKSVSAATAPIXXXXXXXDSAAAAASFSAEGSSEGGGVSDGSGGSGKHPTSXXXXXXXXXXXXXXXXTDAAAPAG----GDGEDAAKAPEGGKAXXXXXXXXXXXXQWGGKKSFLDVVKAPGNLPPPIATAXXXXXXXXXXXXXXGNKAKGGGRMKSPLRGRPEHPFGESRDTKRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGGVSREKGAWA 1163

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17432.1 vs. uniprot
Match: A0A836CHL1_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL1_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.230e-64
Identity = 114/176 (64.77%), Postives = 143/176 (81.25%), Query Frame = 0

Query:   65 KLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSETPQEK-------IREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPV 233
            +L+GKEL+ AL++QVEFYFSK NLQSDGFLVS+M+A  CVP++VIAQF K++ LT+D   I  +V +S+VCTVTP GI+P++K ER+TIILREIPS+TP  K       +RE+F G+G+API+ +RSDVG TWFVT  SE DA+ TILALR +TFEGK +KARLK ENLLRSFFPV
Sbjct:   47 RLEGKELVDALRQQVEFYFSKANLQSDGFLVSRMDASGCVPISVIAQFAKVRALTTDEGAIAAAVANSSVCTVTPQGIRPNLKAERHTIILREIPSDTPPAKASCCCTCVRELFAGEGMAPIRGVRSDVGATWFVTCASEADAMATILALRSRTFEGKPVKARLKGENLLRSFFPV 222

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17432.1 vs. uniprot
Match: A0A7S4DKN7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKN7_HETAK)

HSP 1 Score: 223 bits (567), Expect = 2.340e-63
Identity = 114/176 (64.77%), Postives = 141/176 (80.11%), Query Frame = 0

Query:   66 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQP 241
            L+G+ L  A+KKQ+EFYFS+QNLQ+DGFLVSKMNA M VP+ VIA+F KI+ LT +  +I  +++ S VC VT D IKP+ K ERNTIILREIPS TP+EK+REIFTG+G+API +IRSDVGDTWFVT+ SE  A+   LALR + FEG+ +KARLKSENLLR+F+PVP AA   P
Sbjct:   31 LEGEALREAVKKQIEFYFSRQNLQTDGFLVSKMNANMEVPITVIAEFAKIRALTREPDVIRAALEGSKVCIVTEDAIKPNFKTERNTIILREIPSNTPEEKVREIFTGEGMAPITNIRSDVGDTWFVTLGSEAAAVAACLALRERAFEGRPVKARLKSENLLRAFYPVPQAAADAP 206

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17432.1 vs. uniprot
Match: A0A2P4XI52_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XI52_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.280e-60
Identity = 159/447 (35.57%), Postives = 222/447 (49.66%), Query Frame = 0

Query:   66 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTV--TPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXPPGAGMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXGGMRFGXXXXXXXXXXXXXXXXXXXXXXXMMAGARGGMQMXXXXXXXXXXXQHGMGQQMMGMNANHPQQAAAPA---PAAGGLGYPGA-------------FIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGE 494
            L+G EL  A+K+QVEFYFS+ NL +D +LVS+MN+QM VPV VI  F KI+QLT +TAL+VE+V+DST+C++  + D IKP+IK ER TIILREIPS T  E++  IF G G   + S+RSDVGDTWFVTM SE +A++T+LALR KTF G AIKARLKSEN+L+SF+P   A  V   +A                      G PYG      +P M    NYG          Y    +                      R G                       + A +    Q            +     Q     +++ ++A+ PA   P      +P                  Y  +DI++IV  + ++D  +  G  D   H  A  A+A+  L+  QR+ SI++ R+ +R+GRP+  + V  G++DY + MYGE
Sbjct:    9 LEGAELKQAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDNTALLVEAVQDSTICSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVEAIFEGCG--KVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAAIKARLKSENVLKSFYPTQPAENVIAPSA----------------------GAPYGGRGYYASPNMGYYDNYGVQ--------YNT--VNPRQHNNYSQSAENGRYAGNNQRGGSTAGRGQGRQNRGNGAQHHQQKDVRAKSGSFEQRGPGSSRKNKDKRSKAASQQQTNGSSNGKKASTPAERQPVLNAANFPPLPTAQEEDRTSNVITYSYAHEDIMEIVKNMDENDCMLPEGKMDYAVHPAALTAEAHPDLLRNQRTYSIEQARDAMRQGRPIRSDSV--GSIDYESMMYGE 419

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17432.1 vs. uniprot
Match: A0A8K1FJK8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJK8_PYTOL)

HSP 1 Score: 225 bits (573), Expect = 2.180e-60
Identity = 180/440 (40.91%), Postives = 231/440 (52.50%), Query Frame = 0

Query:   65 KLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTV--TPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXPPGAGMPG--GIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXGGMRFGXXXXXXXXXXXXXXXXXXXXXXXMMAGARGGMQMXXXXXXXXXXXQHGMGQQMMGMNANHPQQAAA---PAPAAGGLGYPGAFI---QYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGE 494
            KL G+EL  A+K+QVEFYFS+ NL +D +LVS+MN+QM VPV  I  F KI+QLT   AL+VE+V DSTV ++  T D IKP+IK ERNTIILREIPS T  E+++ IF G G   + ++RSDVGDTWFVTM SEDDA+ T+LALR KTF    IKARLKSENLLRSF+P     +V+P  A               P  G     G  YG   G  A     Q N G  G GA+                               R  XXXXXXXXXXXXXX           A  +   +              G  ++  G     P   +A   P PA G        +   QY  +DIL+IV  + + D  +  G  D   HS+A    A+  L+  QR+ SI++ RE +R+GRP+  + +  G++DY + MYGE
Sbjct:    9 KLVGEELKKAIKQQVEFYFSRANLANDAYLVSQMNSQMYVPVDTIIAFGKIKQLTESAALLVEAVADSTVVSLNETKDAIKPTIKSERNTIILREIPSATQPEEVKAIFEGSG--EVVNVRSDVGDTWFVTMASEDDAVKTLLALRSKTFNNAPIKARLKSENLLRSFYPT---QQVEPVVAASGVSAYARGYYATGPAGGYYDNYGAQYGQQRGAYANGAGNQRNQGGRGQGAQ------------------------------FRQXXXXXXXXXXXXXXXAKSNSFDQQRPASRKAKDKKGKGQQAAAQQQNSGNAKRASGTAERQPVLNSANFPPLPANGEKPVAAPEVIKYQYAHEDILEIVKHMDEDDCKLPEGKMDYEAHSVALTPIAHPDLLRNQRTYSIEQAREAMRQGRPIRSDSI--GSIDYESMMYGE 411

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17432.1 vs. uniprot
Match: A0A024TXK9_9STRA (HTH La-type RNA-binding domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXK9_9STRA)

HSP 1 Score: 222 bits (565), Expect = 6.930e-60
Identity = 181/431 (42.00%), Postives = 227/431 (52.67%), Query Frame = 0

Query:   66 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDG--IKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXPPGAGMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXGGMRFGXXXXXXXXXXXXXXXXXXXXXXXMMAGARGGMQMXXXXXXXXXXXQHGMGQQMMGMNANHPQQAAAPAPAAGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGE 494
            L G  L  ALK QVEFYFSK NL +D FLVS+MN+QM VPV VI  F KI+ LT+D AL+V+S+KDSTVC+++P+G  IKP+IK ERNTIILREIPS T  + +  IF G G   + S+RSDVGDTWFVTM +E+DA+NT+LALR KTF    IKARLKSEN+LRSF P     E  P+A                         PY   NG    +    P Y  + P A G  Y   G                    G         XXXXXXXXXXXXX        A A G               +H   Q ++  +AN P     P P     G    + +Y  DDI++IV  +  +D  +  G  D   H  A    A+  L+  QR+ SI++ RE LR+GRP+  + V  G+VDY + MYGE
Sbjct:    7 LSGDALKEALKSQVEFYFSKANLVNDTFLVSQMNSQMYVPVDVIVGFSKIKALTTDVALVVDSIKDSTVCSLSPEGDAIKPNIKSERNTIILREIPSATDPKDVEAIFEGCGT--VASVRSDVGDTWFVTMATEEDAVNTLLALRSKTFHDAPIKARLKSENVLRSFLP-----ESTPSANT----------------------TPYQPTNGS---IYGNAPYYSQAVPNAFGVQYA--GRTPIAKTVKVGKGKKGQSITGAAVMAAPTTXXXXXXXXXXXXXDLSAAATPAAASG----------PKSAGKHSERQPILN-SANFP-----PLPLVSANGADITY-KYSHDDIMEIVKHMDDTDCVLPAGKMDFETHESALTPVAHPDLLKNQRTYSIEQAREALRQGRPIRSDSV--GSVDYESLMYGE 384

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17432.1 vs. uniprot
Match: D0NY71_PHYIT (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=D0NY71_PHYIT)

HSP 1 Score: 221 bits (564), Expect = 3.990e-59
Identity = 164/450 (36.44%), Postives = 224/450 (49.78%), Query Frame = 0

Query:   66 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTV--TPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXPPGAGMPGGIPYGMMNGMGAPMMNGQPNYG--YSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXGGMRFGXXXXXXXXXXXXXXXXXXXXXXXMMAGARGGMQMXXXXXXXXXXXQHGMGQQMMGMNANHPQQAAA---------------PAPAAGGLGYPGAFIQYQ--PDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGE 494
            L+G EL  A+K+QVEFYFS+ NL +D +LVS+MN+QM VPV VI  F KI QLT +TAL+VE+V++STVC++  + D IKP+IK ER TIILREI S T  E++  IF G G   + S+RSDVGDTWFVTM SE +A++T+LALR KTF G AIKARLKSEN+L+SF+P   A  V   +                       G PYG      +P M    NYG  Y+    R G +                        G  + G                    XXX      G  +            +    ++    ++N  + AAA               P P A   G     I Y+   +DI++IV  +   D  +  G  D   H  A  A+A+  L+  QR+ SI++ R+ +R+GRP+  + V  G++DY + MYGE
Sbjct:    9 LEGAELKEAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKITQLTDNTALLVEAVQESTVCSLNSSKDAIKPNIKSERTTIILREISSSTKPEEVEAIFEGCG--KVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAAIKARLKSENVLKSFYPTQPAENVIAPSV----------------------GAPYGGRGYYASPNMGYYDNYGVQYNTVNPRAGQH-----------HNYSNGAENSRYAGNNQRGGAVAGRGQGRQNRSNGAGVQXXXXXRAKSGSFEQRGPGSARKSKDKRSKAEKHANNSSNGKKTAAAAPAERQPVMNAANFPPLPTAQEKGEVSNVITYKYAHEDIMEIVKNMDDKDCTLPEGKMDYAVHPAALTAEAHPDLLRNQRTYSIEQARDAMRQGRPIRSDSV--GSIDYESMMYGE 421

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17432.1 vs. uniprot
Match: A0A0W8C538_PHYNI (La-related protein 4 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C538_PHYNI)

HSP 1 Score: 224 bits (570), Expect = 3.420e-58
Identity = 168/449 (37.42%), Postives = 230/449 (51.22%), Query Frame = 0

Query:   67 DGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTV--TPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXPPGAGMPGGIPYGMMNGMGAPMMNGQPNYG--YSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXGGMRFGXXXXXXXXXXXXXXXXXXXXXXXMMAGARGGMQMXXXXXXXXXXXQHGMGQQMMGMNANHPQQAAA---------------PAPAAGGLGYPGAFIQYQ--PDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGE 494
            +G EL  A+K+QVEFYFS+ NL +D +LVS+MN+QM VPV VI  F KI+QLT D AL+V++V+DSTVC++  + D IKP+IK ER TIILREIPS T  E++  IF G G   + S+RSDVGDTWFVTM SE +A++T+LALR KTF G  IKARLKSEN+L+SF+P   A  V   +                       G PYG      +P M    NYG  Y+    R G +                        G  + G               XXXXXXXX      G  +            +    ++    ++N  + AAA               P P A   G     I Y+   +DI++IV  + + D  ++ G  D   H  A  A+A+  L+  QR+ SI++ R+ +R+GRP+  + V  G++DY + MYGE
Sbjct:  265 EGAELKEAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDDKALLVDAVQDSTVCSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVGAIFEGCG--KVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAPIKARLKSENVLKSFYPTQPAENVIAPSV----------------------GAPYGGRGYYASPNMGYYDNYGVQYNTVNPRAGQH-----------HNYSNGAENSRYAGNNQRGGAVAGRGQGRQNRSNXXXXXXXXXXXAKSGSFEQRGPSSSRKNKDKRSKAEKQANNSSNGKKTAAAAPAERQPVLNAANFPPLPTAQEKGEVSKVITYKYAHEDIMEIVKNMDEKDCMLLEGKMDYAVHPAALTAEAHPDLLRNQRTYSIEQARDAMRQGRPIRSDSV--GSIDYESMMYGE 676

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17432.1 vs. uniprot
Match: W4GF54_9STRA (HTH La-type RNA-binding domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GF54_9STRA)

HSP 1 Score: 216 bits (551), Expect = 5.930e-58
Identity = 186/431 (43.16%), Postives = 238/431 (55.22%), Query Frame = 0

Query:   66 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDG--IKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXPPGAGMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXGGMRFGXXXXXXXXXXXXXXXXXXXXXXXMMAGARGGMQMXXXXXXXXXXXQHGMGQQMMGMNANHPQQAAAPAPAAGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGE 494
            L G  L  ALK QVEFYFSK NL +D FLVS+MN+Q+ VPV VI  F KI+QLT+D AL+++S+KDS VC+ +P+G  IKP+IK ERNTIILREIPS T  + +  IF G G   + S+RSDVGDTWFVTM +E+DA+NT+LALR KTF    IKARLKSEN+LRSF P  +AA   P+A                         PY   NG    +    P Y  + P A G  Y                           +  XXXXXXXXXXXXXXXXXXXXXX  ++ A     +           +H   Q ++  +AN P     P P     G    + +Y  DDI++IV  +  +DV +  G  D   H  A    A+  L+  QR+ SI++ RE LR+GRP+  + V  G+VDY + MYGE
Sbjct:    7 LSGDALKEALKSQVEFYFSKANLINDTFLVSQMNSQLYVPVDVIVGFSKIKQLTTDVALVIDSIKDSKVCSSSPEGDAIKPNIKSERNTIILREIPSATEPKDVEAIFEGCGT--VASVRSDVGDTWFVTMATEEDAVNTLLALRSKTFHDAPIKARLKSENVLRSFLPDASAA---PSATA----------------------TPYQPTNGS---IYGNTPYYNQAVPNAFGVQY----------AGRTPLTKPVKAAKAASKXXXXXXXXXXXXXXXXXXXXXXXXKDVSTAPASKSVG----------KHSERQPILN-SANFP-----PLPLTSSNGADITY-KYSHDDIMEIVKHMDDTDVLLPAGKMDFETHESALTPVAHPDLLKNQRTYSIEQAREALRQGRPIRSDSV--GSVDYESLMYGE 378

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig94.17432.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig94.17432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LL21_ECTSI	0.000e+0	86.67	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KRS0_9PHAE	1.120e-282	60.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CHL1_9STRA	1.230e-64	64.77	HTH La-type RNA-binding domain-containing protein ...	[more]
A0A7S4DKN7_HETAK	2.340e-63	64.77	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A2P4XI52_9STRA	1.280e-60	35.57	Uncharacterized protein n=1 Tax=Phytophthora palmi...	[more]
A0A8K1FJK8_PYTOL	2.180e-60	40.91	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A024TXK9_9STRA	6.930e-60	42.00	HTH La-type RNA-binding domain-containing protein ...	[more]
D0NY71_PHYIT	3.990e-59	36.44	Uncharacterized protein n=9 Tax=Phytophthora TaxID...	[more]
A0A0W8C538_PHYNI	3.420e-58	37.42	La-related protein 4 n=4 Tax=Phytophthora TaxID=47...	[more]
W4GF54_9STRA	5.930e-58	43.16	HTH La-type RNA-binding domain-containing protein ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 69..149 e-value: 8.3E-18 score: 75.2
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 75..130 e-value: 7.1E-18 score: 64.4
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 65..154 score: 19.387
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 153..225 e-value: 6.4E-5 score: 25.1
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 62..152 e-value: 1.3E-23 score: 84.5
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 70..231
None	No IPR available	PANTHER	PTHR22792:SF48	LA-RELATED PROTEIN 4	coord: 70..231
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 151..224 score: 10.036
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 68..155
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 138..224

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig94	contig	E-siliculosus-1a_M_contig94:390997..400161 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig94.17432.1	mRNA_E-siliculosus-1a_M_contig94.17432.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig94 388628..400393 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17432.1 ID=prot_E-siliculosus-1a_M_contig94.17432.1|Name=mRNA_E-siliculosus-1a_M_contig94.17432.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=863bp
MRMENSPGPVEVPPVTPEAAAAAAAGEVAAATVIAKVAGASDEVAASSAA
PPAEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNA
QMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQER
NTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDA
LNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAAAAAAP
YGLGAGAGPPGAGMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYG
RGGMMMQQQQPGGAGGGGGGGGAGGMRFGGGMQQQQHVGMVQGGGGGGRG
GGMMAGARGGMQMGGMGGGMHQGQQHGMGQQMMGMNANHPQQAAAPAPAA
GGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADAN
LGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQ
PAGSAPRGEGYGGGGAAGESKKKSDRSRREKGADRPSSDDSKARGGEEKP
GRADPAAATAGAKSKDASNDSGAAGGKGKGSGTATAAAGGGAGEGAPPRP
TRGWEKPEVSQQKQRGLSAGSDAGNRGSKATSAKSAGSSAGTDKKSVSAA
TAPISGDDGVGDSPAAAFSAGESSEGGGASADGGGRHPTSSGSKGAKAKE
GSASGGTDAPAPAPAPAAGNGEDAAKAPEDGKAPAAAPPAASQWGGKKSF
LDVVKAPGNLPPPIAAAPSATKQPPSSSSMMGNKAKGGGRIKSPLRGRPE
PPSGESRDMKRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRS
GGGGSREKGAWA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR036390	WH_DNA-bd_sf
IPR000504	RRM_dom
IPR036388	WH-like_DNA-bd_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR006630	La_HTH