mRNA_E-siliculosus-1a_M_contig94.17420.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17420.1
Unique NamemRNA_E-siliculosus-1a_M_contig94.17420.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17420.1 vs. uniprot
Match: A0A6H5JA57_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA57_9PHAE)

HSP 1 Score: 959 bits (2480), Expect = 0.000e+0
Identity = 526/538 (97.77%), Postives = 528/538 (98.14%), Query Frame = 1
Query:  262 MATFSNLSSLGDHIEKDDDRLQVGHSSSGGDERLRGPEAMAGGGDNSKVKAGDPLAQAAXXXXXXXXXXXXXXXXXXXXXXXXXGGAKLDESADVLKPPESSSVDIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVNQVDAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRNKSRNDDPTMPIRESDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRVALRRSTFRKGMVAIDGQDDPRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVIN 1875
            MATFSNLSSLGDHIEKD DRLQVGHSS+GGDERLRGP AMAGGGDNSKVKAGDPLAQAAXXXXXXXXXXXXXXXXXXXXXXX  GG KLDES DVLKPPESSSVDIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDV   DAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRNKSRNDDP+MPIRESDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRVALRRSTFRKGMVAIDG DDPRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVIN
Sbjct:    1 MATFSNLSSLGDHIEKDHDRLQVGHSSAGGDERLRGPAAMAGGGDNSKVKAGDPLAQAAXXXXXXXXXXXXXXXXXXXXXXXGAGGPKLDESVDVLKPPESSSVDIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDV---DAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRNKSRNDDPSMPIRESDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRVALRRSTFRKGMVAIDGHDDPRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVIN 535          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17420.1 vs. uniprot
Match: A0A7S2WNE9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNE9_9STRA)

HSP 1 Score: 613 bits (1582), Expect = 8.870e-206
Identity = 307/438 (70.09%), Postives = 371/438 (84.70%), Query Frame = 1
Query:  562 SSSVDIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVNQVDAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRNKSRNDDPTMPIRESDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRV-ALRRSTFRKGMVAIDGQDDPRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVI 1872
            + S ++R+AMIGNVDSGKSTLIGVL+S+ LDDGRG ARS++LRHRHEQENGRTSAV++E+MGY +DG+QVVP AR H QRW E+V +SDR+++LIDLCGHE+YLKTTVFGLTG+MPDF LLVVGANMGVQRMT+EHISIACALQ+PIAVVVTKVDICP  VLKQTRQ LAKYLR N+KMPYP+K ++QVDAAA+++ASDRITPVFA+S+VTG GL LL+AF+ARLRRN          +    +P +HFPIDGVYEV GVGIV GGT+ RG V VNQTLL+GPDR G +I VTVRSIE KRQ V EA  G SATFA+R++ R+   L+RSTFRKGMV +  +D+PRA R+FEA VVILHHSTT++ GYQPV+HCGVVRQ+A+++++ GTES    LRTGQ A V FRF+Y++EY++ G+TFLFREGRAKGIGKI R+I
Sbjct:   36 AESGEVRVAMIGNVDSGKSTLIGVLTSASLDDGRGLARSVMLRHRHEQENGRTSAVSVELMGY-RDGEQVVPQARHHHQRWTEIVENSDRAISLIDLCGHERYLKTTVFGLTGMMPDFALLVVGANMGVQRMTREHISIACALQLPIAVVVTKVDICPQPVLKQTRQDLAKYLRSNRKMPYPVKQLDQVDAAADAVASDRITPVFAISSVTGQGLELLKAFLARLRRNSRNFIAEAEQVAPGSMPGIHFPIDGVYEVHGVGIVAGGTLTRGHVKVNQTLLLGPDRTGSYIPVTVRSIESKRQGVSEATPGISATFAIRAIGRKTEGLKRSTFRKGMVLLGEKDEPRAVRQFEATVVILHHSTTISEGYQPVVHCGVVRQSASMVAIHGTES----LRTGQRAQVHFRFLYFAEYVLPGATFLFREGRAKGIGKITRLI 468          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17420.1 vs. uniprot
Match: A0A7S2BKI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKI3_9STRA)

HSP 1 Score: 612 bits (1579), Expect = 1.000e-205
Identity = 312/436 (71.56%), Postives = 370/436 (84.86%), Query Frame = 1
Query:  574 DIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVNQVDAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRNKSRNDDPT-MPIRESD--LPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRVALRRSTFRKGMVAIDGQDDPRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVI 1872
            D+R+AMIGNVDSGKSTLIGVL+S+ LDDGRG ARSLVLRHRHEQENGRTSAVT+E+MGY KDG+QVVP AR H QRWAEVV+ SDR++TLIDLCGHEKYLKTTVFGLTG+MPD  LLVVGANMGVQ MTKEH++IACALQ+PIAVVVTKVDICP  +LKQTRQ++AK LRQN+KMPYP+KD +QV+AAA+++ SDR+TPVFA+S+VTGMGL LL+ F+ +L RN      PT  P  +S+  LP +HFPIDG+YEVRGVG+VVGGT+ RG+V VNQTLL+GPDR G F+ VTVRSIE KRQSV E + GQSATFA+R L RR ALRRS+FRKGMV +   D P A R FEA V+ILHHSTT++ GYQPV+HCGVVRQAA++ ++ G+ES    LRTGQ A VRFRFMYY E+++ G+TFLFREGRAKGIGKI + +
Sbjct:   83 DVRVAMIGNVDSGKSTLIGVLTSACLDDGRGLARSLVLRHRHEQENGRTSAVTVELMGY-KDGEQVVPQARQHNQRWAEVVDQSDRAITLIDLCGHEKYLKTTVFGLTGMMPDLALLVVGANMGVQIMTKEHVAIACALQLPIAVVVTKVDICPQPILKQTRQSIAKCLRQNRKMPYPVKDSSQVEAAAQAVISDRVTPVFAISSVTGMGLKLLKDFLGKLSRNPRNFLAPTNQPADKSNIPLPDIHFPIDGIYEVRGVGMVVGGTLTRGNVKVNQTLLLGPDRVGVFVPVTVRSIESKRQSVPEVHSGQSATFAIRVLGRRPALRRSSFRKGMVMVHEADKPMAVRHFEAAVIILHHSTTISEGYQPVVHCGVVRQAASMEAIHGSES----LRTGQRAQVRFRFMYYGEFLLPGATFLFREGRAKGIGKITKTV 513          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17420.1 vs. uniprot
Match: A0A7R9UAM3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAM3_9STRA)

HSP 1 Score: 600 bits (1547), Expect = 3.310e-200
Identity = 304/435 (69.89%), Postives = 367/435 (84.37%), Query Frame = 1
Query:  574 DIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVNQVDAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRNKSRNDDPTMPIRESDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRVALRRSTFRKGMVAIDGQDDPR--ATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVI 1872
            D+R+AMIGNVDSGKSTLIGVL+S+GLDDGRG+ARSLVL+HRHEQ+NGRTSAVT+E+MGY +DG+QVV TAR H QRWA+VV  +DRSVTLIDLCGHEKYLKTTVFGLTG+ PDFC++VVGANMGVQRMT+EHISIACAL IP+ V VTK+DI P  VLKQTR+ LAK+LR   KMPYP+K+ +QV+AAA+S+ASDRITPVFA+S+VTG+GLPLLR FV+++RR+ +        I   DLP  +FPIDGVYEV+GVGIVVGGTM+RGSV+VN T+L+GPDRAG ++ VTVRSIECKRQ+ +    GQ+ATFA+RSL+RRVALRR+ FRKGM  I   D+ R  A R+FEA VVILHHSTT+A GYQPVIHCG VRQAA ++S+ G ES    LRTGQ   V FRF+Y++E ++ GSTFLFREGRAKG+GK+ R+I
Sbjct:  150 DVRVAMIGNVDSGKSTLIGVLTSAGLDDGRGSARSLVLKHRHEQDNGRTSAVTVEVMGY-RDGEQVVATARQHSQRWAQVVKEADRSVTLIDLCGHEKYLKTTVFGLTGMCPDFCIVVVGANMGVQRMTREHISIACALSIPLVVCVTKIDIAPQPVLKQTRRTLAKFLRACGKMPYPVKESSQVEAAAQSVASDRITPVFAISSVTGLGLPLLREFVSKIRRSFNLYRPAVPAISGQDLPEKYFPIDGVYEVKGVGIVVGGTMIRGSVSVNDTMLLGPDRAGAWLPVTVRSIECKRQATENVKTGQAATFAIRSLSRRVALRRAFFRKGMALIGELDNERVKAVRDFEASVVILHHSTTIATGYQPVIHCGTVRQAAQLVSVEGGES----LRTGQRDLVTFRFLYFTELILPGSTFLFREGRAKGLGKVTRLI 579          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17420.1 vs. uniprot
Match: A0A6V2X5T2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2X5T2_HETAK)

HSP 1 Score: 596 bits (1537), Expect = 3.560e-200
Identity = 306/451 (67.85%), Postives = 369/451 (81.82%), Query Frame = 1
Query:  526 LDESADVLKPPESSSVD--IRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVNQVDAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRNKSRNDDPTMPIRESDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRVALRRSTFRKGMVAIDGQDDPRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVI 1872
            L +    L+ P+   +D  +R+AMIGNVDSGKSTLIGVL++  LDDGRGAARS VL+HRHEQENGRTSAV++E+MGY +  +QVVPT R  L+RWAEVV +S+RS+TLIDLCGHE+YLKTTVFGLTG++PDF ++VVG NMGVQ MT+EHISIA AL IP+AV VTKVDI P  VLKQTRQ LAK+LR++ K+PYP++D +Q  AAA+SI SDR+TPVFA+SNVTG GL LLR F+++LRRNK +  DP + + ES +P VHFPIDGVYEVRGVG+VVGGT+LRG V   QTL +GPDR G F+ VTVR+IE KRQSV EA EG SATFA+RSLN++V LRR+ FRKGMVAIDG D PRA R FEA VVILHHSTTV+ GYQPVIH GV+RQAAA+  +   E    ALRTGQ A VRFRF+Y++EY++ G+TFLFREGRAKG+GK+ RV 
Sbjct:   38 LSDDEHKLEVPDVQEMDDDVRVAMIGNVDSGKSTLIGVLTNCTLDDGRGAARSSVLKHRHEQENGRTSAVSVEVMGYNEKNEQVVPTERQALKRWAEVVRNSERSLTLIDLCGHERYLKTTVFGLTGMLPDFTVVVVGGNMGVQLMTREHISIAAALAIPMAVAVTKVDIAPVPVLKQTRQTLAKFLRKHGKLPYPVRDADQAAAAADSICSDRVTPVFAISNVTGQGLDLLRLFLSKLRRNKCKALDPEL-VDESLMPRVHFPIDGVYEVRGVGLVVGGTLLRGGVREGQTLQVGPDRTGAFVPVTVRTIEVKRQSVPEAKEGMSATFAIRSLNKKVTLRRTFFRKGMVAIDGGDTPRAVRSFEASVVILHHSTTVSHGYQPVIHAGVIRQAAAMDQIFAEE----ALRTGQRAEVRFRFLYFAEYLLPGATFLFREGRAKGLGKVTRVF 483          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17420.1 vs. uniprot
Match: A0A836C8C3_9STRA (Elongation factor Tu GTP binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C3_9STRA)

HSP 1 Score: 593 bits (1530), Expect = 5.320e-200
Identity = 304/425 (71.53%), Postives = 354/425 (83.29%), Query Frame = 1
Query:  589 MIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTAR-SHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVNQVDAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRNKSRNDDPTMPIRESDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRVALRRSTFRKGMVAIDGQDDPRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKI 1860
            MIGNVDSGKSTLIGVL +   DDGRG+ARSLVL+HRHEQENGRTSAVT EIMGY  +G QVVPT++ SH+ RWAEVV +S+R++TLIDLCGHE+YLKTTVFGLTGLMPD+C+LVVG+NMGVQ MTKEHISIACAL+IP+AV VTKVDICP  VLKQTRQ LAKYLRQN KMPYP+KD  QV+ AA SIASDRITPVFAVSNVTG GL LLR FV++LRR K       + +  + +PAVHFPIDGVYEV+GVG+V+GGT++RGSVTVNQ L +GPDR+G ++ V+VRSIECKRQ VKE   G SAT AVR+++RR  LRR  FRKGM+AI   D PR+  EF+ADVV+LHH TT+  GYQPVIHCGVVRQAAAI S+ GT +    LRTG TA+V  +F YYSEYM +G+TFLFREGRAKGIGK+
Sbjct:    1 MIGNVDSGKSTLIGVLCNRCTDDGRGSARSLVLKHRHEQENGRTSAVTTEIMGYTAEGDQVVPTSKKSHVARWAEVVQNSERNITLIDLCGHERYLKTTVFGLTGLMPDYCILVVGSNMGVQVMTKEHISIACALRIPLAVCVTKVDICPVPVLKQTRQTLAKYLRQNHKMPYPVKDEAQVETAASSIASDRITPVFAVSNVTGHGLDLLRLFVSKLRRQKMELSQ-EIALDPATVPAVHFPIDGVYEVKGVGLVIGGTVMRGSVTVNQNLQVGPDRSGQYVPVSVRSIECKRQPVKEVGLGVSATLAVRAISRRPNLRRQHFRKGMLAIGANDLPRSCWEFQADVVVLHHQTTIGVGYQPVIHCGVVRQAAAITSIDGTTTAN--LRTGATASVVLKFQYYSEYMEIGTTFLFREGRAKGIGKV 422          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17420.1 vs. uniprot
Match: W7TYD2_9STRA (Gtp-binding protein 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYD2_9STRA)

HSP 1 Score: 569 bits (1466), Expect = 5.140e-188
Identity = 285/435 (65.52%), Postives = 355/435 (81.61%), Query Frame = 1
Query:  574 DIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVNQVDAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRNKSRNDD-PTMPIRE-SDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRVALRRSTFRKGMVAIDGQDDPRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVI 1872
            D+R+AMIGNVD+GKSTLIGVL+++ LDDGRG+ARSLVL+HRHEQENGRTSAVT+E++GY   G+QV+P  R+   RW E+V  S R+VTLIDLCGHE+YLKTT+FGLTGL+PDF LL+VG+NMGV  MT+EHI+IACAL IP+AVV+TK+DI P  VLKQTRQ LA+YLR+N K+PYPIKD+ QV+AAA+S+ASDR+TPVFA+S+VTG G+ LLRAFV+RLRR         T P    S+ P++H P+DGVYEV+GVG+VVGGT+LRG V  NQ+LL+GPDR G F+ ++VRSIEC+RQ VKEA  G S TFAVRSLN++V LRRS FRKGMV +  +D PR  R+F A VVILHHSTT++ GY+PV+H G VRQAA +  + G   G EALRTG  A V F F Y++E++V+GSTFLFREGRAKGIGK+ R++
Sbjct:   87 DVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQGRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRKNNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRRTPRLYQGLTTSPCPGGSEAPSIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLNKKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILG---GEEALRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKVSRLL 518          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17420.1 vs. uniprot
Match: A0A7S3K4J1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4J1_9STRA)

HSP 1 Score: 544 bits (1401), Expect = 8.790e-179
Identity = 286/466 (61.37%), Postives = 347/466 (74.46%), Query Frame = 1
Query:  574 DIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVNQVDAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRR--------NKSRNDDPTMPIRE--------------------------SDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRVALRRSTFRKGMVAIDGQDDPRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRV 1869
            DIR+AMIGNVDSGKS+LIGVL++  LDDGRG ARSLVL+H+HEQ NGRTSAVT+E+MG+ K+  Q+VPTAR H QRWAEVV  SD+SVTLIDLCGHE+YLKTTVFGLT + PD+ LLVVGANMGVQRMTKEH++IACAL IPIAVV+TK+D+CP  VLKQTRQ LA+ LRQ+Q+MP P+KD  QV  AAESI + RI PVF+VSNV+G+G+PLLR F++++RR        + +      +PIR                           S LP  H  IDGVYEVRGVG++VGGT+ RG ++VN T+L+GP+R G+FI V VRSIECKRQ +KEA  G +AT A+RSLNRR  LRR   RKGMV I  +D P+ATR FEA V ILHHSTTVA GY+PV+H   VRQ  A+LS+    SG   LRTG  A V FRF Y+ EY++ G+TFLFREGRAKGIGK+ ++
Sbjct:   89 DIRVAMIGNVDSGKSSLIGVLTNGSLDDGRGLARSLVLKHKHEQSNGRTSAVTVELMGF-KEEHQIVPTARHHSQRWAEVVAGSDKSVTLIDLCGHERYLKTTVFGLTAMYPDYALLVVGANMGVQRMTKEHVAIACALSIPIAVVITKIDMCPQPVLKQTRQTLARCLRQHQRMPLPVKDDAQVIVAAESIQNGRIAPVFSVSNVSGLGVPLLRNFLSKIRRAERPLTRSHTALEAPGVLPIRPASDDNICADHDQANAAQDIAALTPDYSSLPKTHLAIDGVYEVRGVGLIVGGTVTRGCISVNDTILLGPNRVGEFIPVLVRSIECKRQPIKEARPGMAATLAIRSLNRRNPLRRGYMRKGMVLIGEKDSPKATRAFEASVCILHHSTTVAEGYEPVVHAQTVRQTCALLSI---HSGDHVLRTGAKALVVFRFKYHFEYLLPGTTFLFREGRAKGIGKVIKI 550          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17420.1 vs. uniprot
Match: F0Y7C9_AURAN (Tr-type G domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7C9_AURAN)

HSP 1 Score: 523 bits (1347), Expect = 7.730e-173
Identity = 272/430 (63.26%), Postives = 335/430 (77.91%), Query Frame = 1
Query:  574 DIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVNQVDAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRNKSRNDDPTMPIRESDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRVA-LRRSTFRKGMVAIDGQDDPRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKI 1860
            D+R+AMIGNVDSGKSTLIGVL++ GLDDGRG ARSLVLRH+HEQENGRTS V++E+MG+  + +QV+PTAR H QRW EVV+  DR+V+LIDLCGHE+YLKTTVFGLT ++PDF LLVVGANMGVQRMT+EHISIA AL +PIAVVVTKVDICPP VLKQTRQ LA+ LR + +MP P+K+ +Q+  AAES  + R+ PVFAVS+V G GL LL+ F+  L R  +    PT           H  IDGVYEVRGVG++VGGT+ RG++ V   L +GPDRAG F+ V+V+SIECKRQ +     G +AT A+R+L+R+   LRR+ +RKGMV +   D PRA+R F ADVVILHHSTTV  GYQPV+HCGVVRQA A+L++   E+    LRTG  A V FRFMY++EY+++G+TFLFREGRAKGIGKI
Sbjct:    4 DVRVAMIGNVDSGKSTLIGVLTAGGLDDGRGGARSLVLRHKHEQENGRTSTVSVELMGFQGE-RQVLPTARQHAQRWKEVVDACDRNVSLIDLCGHERYLKTTVFGLTAMLPDFALLVVGANMGVQRMTREHISIAVALSLPIAVVVTKVDICPPDVLKQTRQTLARCLRHHGRMPMPVKERDQLANAAESAGAGRVAPVFAVSSVKGDGLDLLKGFLGLLER--APRPIPT-----------HLCIDGVYEVRGVGLIVGGTLTRGAIAVGDALWLGPDRAGAFVSVSVKSIECKRQPIDAIKPGVNATLALRALHRKAPPLRRAYYRKGMVLLGASDAPRASRRFSADVVILHHSTTVQEGYQPVVHCGVVRQACALLNICNKEN---LLRTGAKARVTFRFMYHTEYLLVGATFLFREGRAKGIGKI 416          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17420.1 vs. uniprot
Match: A0A812UTX0_SYMMI (GTPBP1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UTX0_SYMMI)

HSP 1 Score: 514 bits (1324), Expect = 3.150e-169
Identity = 260/433 (60.05%), Postives = 339/433 (78.29%), Query Frame = 1
Query:  589 MIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVNQVDAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRNKSR-----NDDPTMPIRESDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLN-RRVALRRSTFRKGMVAIDGQDD--------PRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAK 1845
            M+GNVDSGKSTL+GVL+S+ LDDGRG ARSL+L+HRHEQ+NGRTSA T+EIMG+ KD  QVVPTAR+H+QRW E+   S+R++TLIDLCGHEKYLKTT+FGLTGLMPDF  L+VG+NMGVQ MT+EHISI+CAL +P+ V V+KVDICPP VL+ TR+ LAK LR   KMP+P+KD++    AA +IAS+RITPVF +SNVTG G+ LL+AF++RL+R+  R     + DP +   +S++P+V+  +DGVYEV+GVGIVVGGT+LRG++ V Q L +GPD AG F  + VRSIE +R  + EA  GQSAT +V+S N ++  +RR+ FRKGMV ++G D         P   REF+A V+ILHHSTT++ GYQPVIHCGV+RQ+A I+ + G +   + L+TG+ A VRFRF+Y++EY++ G TFLFREGRAK
Sbjct:    1 MVGNVDSGKSTLVGVLTSAALDDGRGCARSLILKHRHEQDNGRTSAATVEIMGF-KDNTQVVPTARNHIQRWVEINERSERTLTLIDLCGHEKYLKTTLFGLTGLMPDFAFLIVGSNMGVQMMTREHISISCALNLPMFVAVSKVDICPPNVLQNTRRTLAKILRSYGKMPHPVKDMDSAVIAAAAIASNRITPVFTISNVTGQGVDLLKAFLSRLKRSPMRYAPWEDKDPEVKY-DSEIPSVYMSLDGVYEVKGVGIVVGGTVLRGTIRVGQVLYVGPDCAGSFYPIVVRSIESRRVPLGEAKTGQSATLSVKSTNPKKFTVRRAWFRKGMVVVNGVDSRPKGVDMVPIGVREFDASVMILHHSTTISCGYQPVIHCGVLRQSAGIVDIQGDD---KRLKTGERAVVRFRFLYFAEYIIPGDTFLFREGRAK 428          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA57_9PHAE0.000e+097.77Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2WNE9_9STRA8.870e-20670.09Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2BKI3_9STRA1.000e-20571.56Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7R9UAM3_9STRA3.310e-20069.89Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6V2X5T2_HETAK3.560e-20067.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836C8C3_9STRA5.320e-20071.53Elongation factor Tu GTP binding domain-containing... [more]
W7TYD2_9STRA5.140e-18865.52Gtp-binding protein 1 n=2 Tax=Monodopsidaceae TaxI... [more]
A0A7S3K4J1_9STRA8.790e-17961.37Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0Y7C9_AURAN7.730e-17363.26Tr-type G domain-containing protein (Fragment) n=1... [more]
A0A812UTX0_SYMMI3.150e-16960.05GTPBP1 protein n=1 Tax=Symbiodinium microadriaticu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:250093..257712 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1617
Model size3373
Exons11
Ec32 orthologEc-27_000690.1
Ec32 ortholog descriptionGTPBP1, EF1alpha-like GTPase
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.J
EggNOG OGsCOG5258@1,KOG0463@2759
EggNOG free text desc.GTP metabolic process
Seed eggNOG ortholog2880.D7FIQ8
Seed ortholog evalue3e-282
Seed ortholog score977.2
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936496.2932367-UTR-E-siliculosus-1a_M_contig94:250092..2503531622936496.2932367-UTR-E-siliculosus-1a_M_contig94:250092..250353Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig94 250093..250353 +
1696251104.903207-UTR-E-siliculosus-1a_M_contig94:250092..2503531696251104.903207-UTR-E-siliculosus-1a_M_contig94:250092..250353Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig94 250093..250353 +
1622936496.512838-UTR-E-siliculosus-1a_M_contig94:256217..2577121622936496.512838-UTR-E-siliculosus-1a_M_contig94:256217..257712Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig94 256218..257712 +
1696251105.0451033-UTR-E-siliculosus-1a_M_contig94:256217..2577121696251105.0451033-UTR-E-siliculosus-1a_M_contig94:256217..257712Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig94 256218..257712 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936496.313278-CDS-E-siliculosus-1a_M_contig94:250353..2504191622936496.313278-CDS-E-siliculosus-1a_M_contig94:250353..250419Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 250354..250419 +
1696251104.914161-CDS-E-siliculosus-1a_M_contig94:250353..2504191696251104.914161-CDS-E-siliculosus-1a_M_contig94:250353..250419Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 250354..250419 +
1622936496.3321223-CDS-E-siliculosus-1a_M_contig94:251349..2516301622936496.3321223-CDS-E-siliculosus-1a_M_contig94:251349..251630Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 251350..251630 +
1696251104.9301698-CDS-E-siliculosus-1a_M_contig94:251349..2516301696251104.9301698-CDS-E-siliculosus-1a_M_contig94:251349..251630Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 251350..251630 +
1622936496.352715-CDS-E-siliculosus-1a_M_contig94:251801..2519611622936496.352715-CDS-E-siliculosus-1a_M_contig94:251801..251961Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 251802..251961 +
1696251104.939449-CDS-E-siliculosus-1a_M_contig94:251801..2519611696251104.939449-CDS-E-siliculosus-1a_M_contig94:251801..251961Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 251802..251961 +
1622936496.371456-CDS-E-siliculosus-1a_M_contig94:252430..2525601622936496.371456-CDS-E-siliculosus-1a_M_contig94:252430..252560Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 252431..252560 +
1696251104.9495728-CDS-E-siliculosus-1a_M_contig94:252430..2525601696251104.9495728-CDS-E-siliculosus-1a_M_contig94:252430..252560Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 252431..252560 +
1622936496.39521-CDS-E-siliculosus-1a_M_contig94:252768..2528631622936496.39521-CDS-E-siliculosus-1a_M_contig94:252768..252863Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 252769..252863 +
1696251104.9661741-CDS-E-siliculosus-1a_M_contig94:252768..2528631696251104.9661741-CDS-E-siliculosus-1a_M_contig94:252768..252863Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 252769..252863 +
1622936496.4120784-CDS-E-siliculosus-1a_M_contig94:253369..2535011622936496.4120784-CDS-E-siliculosus-1a_M_contig94:253369..253501Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 253370..253501 +
1696251104.975753-CDS-E-siliculosus-1a_M_contig94:253369..2535011696251104.975753-CDS-E-siliculosus-1a_M_contig94:253369..253501Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 253370..253501 +
1622936496.4302793-CDS-E-siliculosus-1a_M_contig94:253751..2539011622936496.4302793-CDS-E-siliculosus-1a_M_contig94:253751..253901Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 253752..253901 +
1696251104.98524-CDS-E-siliculosus-1a_M_contig94:253751..2539011696251104.98524-CDS-E-siliculosus-1a_M_contig94:253751..253901Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 253752..253901 +
1622936496.4485142-CDS-E-siliculosus-1a_M_contig94:254370..2545351622936496.4485142-CDS-E-siliculosus-1a_M_contig94:254370..254535Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 254371..254535 +
1696251104.9950254-CDS-E-siliculosus-1a_M_contig94:254370..2545351696251104.9950254-CDS-E-siliculosus-1a_M_contig94:254370..254535Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 254371..254535 +
1622936496.466283-CDS-E-siliculosus-1a_M_contig94:254897..2550171622936496.466283-CDS-E-siliculosus-1a_M_contig94:254897..255017Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 254898..255017 +
1696251105.005909-CDS-E-siliculosus-1a_M_contig94:254897..2550171696251105.005909-CDS-E-siliculosus-1a_M_contig94:254897..255017Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 254898..255017 +
1622936496.4783504-CDS-E-siliculosus-1a_M_contig94:255400..2556251622936496.4783504-CDS-E-siliculosus-1a_M_contig94:255400..255625Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 255401..255625 +
1696251105.0184727-CDS-E-siliculosus-1a_M_contig94:255400..2556251696251105.0184727-CDS-E-siliculosus-1a_M_contig94:255400..255625Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 255401..255625 +
1622936496.4929798-CDS-E-siliculosus-1a_M_contig94:256124..2562171622936496.4929798-CDS-E-siliculosus-1a_M_contig94:256124..256217Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 256125..256217 +
1696251105.0309527-CDS-E-siliculosus-1a_M_contig94:256124..2562171696251105.0309527-CDS-E-siliculosus-1a_M_contig94:256124..256217Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 256125..256217 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17420.1prot_E-siliculosus-1a_M_contig94.17420.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig94 250354..256217 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig94.17420.1

>prot_E-siliculosus-1a_M_contig94.17420.1 ID=prot_E-siliculosus-1a_M_contig94.17420.1|Name=mRNA_E-siliculosus-1a_M_contig94.17420.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=539bp
MATFSNLSSLGDHIEKDDDRLQVGHSSSGGDERLRGPEAMAGGGDNSKVK
AGDPLAQAAAAAVATVAVAGDEDGKSASAPAAGAGGAKLDESADVLKPPE
SSSVDIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQEN
GRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGH
EKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVV
VTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVNQVDAAAESIASDR
ITPVFAVSNVTGMGLPLLRAFVARLRRNKSRNDDPTMPIRESDLPAVHFP
IDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECK
RQSVKEANEGQSATFAVRSLNRRVALRRSTFRKGMVAIDGQDDPRATREF
EADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQT
ATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVIN*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig94:250093..257712+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig94.17420.1 ID=mRNA_E-siliculosus-1a_M_contig94.17420.1|Name=mRNA_E-siliculosus-1a_M_contig94.17420.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7620bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:250093..257712+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GTTCTTTCAGGCTGTCTCTCTCTCGGTCCCAACGAACAGTACAACAGCAA CATCAACCTCGGCTATTGTGTGCTTTTCCGCCCCCCAGCTGAGAGCACGG TGACCCACTTTCCATCCACGCTCTTGGGTGCCTTCTCCGCAGGAAACATC TCTGAAACAGCACAGACCGTTTGAGAGCACTGAGCGCTCGGTACAACCAA GCTCCCCTTTCCCAACTCATTGTGTGTGTGTCGTCACCTTCGGAGCCGTG ACCACAACAACATGGCCACCTTCTCCAACCTGTCTTCGTTAGGAGACCAC ATCGAGAAAGACGACGACCGGTTACAGGTGCGGTGTCTCTCTGCAAACAA CACGCTGTTAAAATGTGGTACAGACAGCAGTCGGGCAGAGAGGTATTGAT GTTGGTCGCACGAGTCTGCAAGCAATCGTGCACGGGTTTGTGGTCGGCAC CATGGTTGGAGAGGATTGTATGCATAGCAGCGTCAAGTGCTGCACTGGTG AGATGCGATGGGTTCATGACAGCATGATGTACACACACTTCTCCTTTTAT ACAACCGAAAAATTTGCCAAATGGATGGTTCTTCCCTGCGGTCGTGGTGG CATCTGCGTAGCATGCACCGCTACAACAGCTGAGACGCCAGCATGACGTG TACCACCCGCTATCGATTCGTCGCAAAGGGTTAAAAATCGGAATCGTTCG TTCGGTACAACGCGATTTGATTGGACGACGGTGTGCGAATGCAGTTAACA AGAATTTTGGTCCGGTACCTAAGGTAACTTCAACTTGCTGTGTGATGCTT GGTGTGTCGGTGTTACCACGAAACCAGGTGCTATCCTACTCTTCCTTGTT ATCGTGGTTGTTGTCGTCGTTGTCGACACTGTTGTTTGTTGTTGTTTGTA CTTCAATGTTGTTGTTAGTGCTGTGGCAGTTTCCGAACTGGAGCTTGACT GTTCAGATTCAACAAGAACACGAATGACGTGTCAGAATTGAAGCAGCGTT CCTGGTGGACGACAAACGCCTCTCAGAGGTGTCAACCTTGAAGCGACGGC TCCTTCGTTCGTACCGAGTACATGCATTGTACCTCCCCTCTCGCTTATCT CTCTGCACTCTTCGTGCGTAACCTACCGTATACCATCCCCCCATCGACCC CTACAAGGTGTCATTCTTAACTACCGCCTCTAGCGTCAAGGCTAGCGGCA ACGACAGCCTTGGATGACAAAGCCCTGTCACCGCCCCTTTGCTGCCCTCT TGCACAGGTTGGTCACTCGTCCTCTGGCGGCGACGAGCGATTACGCGGGC CAGAAGCGATGGCGGGGGGTGGCGACAATAGCAAGGTCAAAGCAGGAGAC CCGTTAGCCCAAGCAGCAGCAGCAGCAGTGGCAACGGTGGCGGTAGCCGG GGATGAAGACGGAAAAAGCGCGTCAGCGCCAGCGGCCGGGGCGGGCGGAG CGAAACTGGACGAGAGTGCGGACGTGCTCAAGCCCCCAGAGTCCAGCAGC GTTGACATCCGTATCGCCATGATCGGAAACGTAGACAGGTAGGTGCAAGC AGCAGAAGATGCGTAGGAGTAGCGTTTTTTTTGCTCGTTCAATCTGCTGT ATCCCCGCTAACTAGCTGTTCGATTGACATCATGCTGTCTCGCTCAGCTC CCGGGCCAACATCTACGGCTTCTATCGTTTCTGAAACTAATTTTGTTTCC ATTCCTCAGCGGGAAGTCCACCTTGATCGGGGTTCTATCCAGCTCTGGCC TGGATGATGGCCGCGGCGCAGCGCGTAGCTTGGTACTTCGCCACCGCCAC GAGCAGGAGAACGGCCGCACCTCCGCCGTGACGATGGAGATCATGGGGTA TGCGAAGGACGGCAAGCAGGTGCGCTCGCCGTTTGGCGCCCTCTCCCTCG CTCTATCTTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTACGATTTAGCAATATGTCGCCT GCCGTGTCGACGTCGACCTCTTGGGCCCACGTTACATCGAACGTTGTCGT CGCCACATGTCGAGGTTGCAACAAACGCGCTATTCTGTTTGCCTTTTCGC ACAGGTGTATTGATTGGTTGCCAAGCGTTGTTGCTGTGCCGCATGGTCCA AGTTTTTTCTGGGGATCGCTTTCCGCCCAGTCTGTCTACCCTCCCACGGG GCCAACCAAGCAGCAGCAGCTTGTGTGAAGGAGACAACGTGTCTTCTCTT GGCTCGATGTTTTTCACGAAGGCGTAGCCTCCCCGCTGCACTACTGACTT GCGGTTTCTCGCGTACGAACTTGACGATGACGGTACAGGTTGTCCCGACA GCGAGGTCGCACCTCCAGCGGTGGGCGGAGGTGGTGAACCACAGCGACCG CAGCGTGACCCTCATCGACCTCTGCGGGCACGAGAAGTACCTCAAGACGA CTGTGTTCGGCCTCACTGGTAAGCTTTTCAACTAGCCGTGTTCTATCGCT CCGTCGTGGTACTACATGTCAATCCATACCCCCGCGTCAATCCCGTCATT GTAGGGGAACCACCTGGTCTACGCGTGTCGCCCCACGCTTGAGCAGAACG ACTCCCATCGCTGTCGCCGTTTGCGTGGCATGCTGCTGCTCCTTTTTTTT TTGCGATGACGTGCGTGGTGGAACAGGTTTGATGCCGGACTTCTGCCTGC TTGTGGTCGGGGCGAACATGGGCGTGCAGCGGATGACAAAGGAGCACATC AGCATCGCCTGCGCACTACAGGTACATGCATGTTTCACGGTCGACCCTCG GGCGCGATTCAGAACATAGGAGTAGGTTGCGTGCTGGTTTTCAGTTTCTA GAGGTCCCTCGCGTGTGCCTCATTTTTGTAACCCTGTCTTGTTGGGAATT TTGTCTTATGTTTTGGGTTTCCGTAGTCTGTTCTTTCGCGTGTTTTATCG GCAACAATTGGGCAAATGATACCCAAACCGGCGGGAAAAATGGCGACAGT TTCTACTTCTAGCTGAGAGACGTGCATGCATCCGTTAGACGCTTAGGTCC AGTTGAGACACTGAAGCGAAGCAACCCTCCGGCCACGCGCGGAGATTACG AGTGCCGCCGTGACTTTATCCTAATGGTATATATTATGCCGTGTCCATCT CTCCCGGCACCGTCGAAACACCCCTTTCCTCACCGTCTTGCGCTTGTCTT GCTTCTGGCGGGCCTCACTCTCTTACCGCGTCCGTTGCTGCCTTGGTGCT GCCTCGACACACACACAATCGCCTCAGATTCCCATCGCTGTGGTGGTGAC GAAGGTTGACATCTGCCCGCCGACGGTCCTCAAGCAGACCCGGCAGGCGT TGGCGAAGTACCTTCGGCAGAACCAGAAGATGCCTTACCCCATCAAGGAC GTGAACCAGGCAAGTGCACGCCCCCTTCCCCGCGCGTTTGTTTGGCAGTG GAAGGCGTCTCTGTTAGGCACGGTGACTGGAAGGGTACCTTTGGTCATGG CATGGATGCGATAAGTGCGCCACCTCTTCCACGTCCTTCTTCCGATCAAT ATCTGATGATGGTTCGCATATCGGGCTGCTGCTGCTGCTGATACCGTTCA CGTCTTCGCTAATGATAGCCGGTGTACTGCTGTGGAAATTTCGCTGTCTG TGTGGATAGGTGGACGCAGCGGCGGAGAGCATCGCTTCCGACCGCATCAC GCCGGTGTTCGCCGTGTCCAACGTGACCGGAATGGGTCTGCCCCTGCTGC GCGCTTTCGTGGCGCGATTACGGCGCAACAAATCCAGGAATGACGACCCT ACAATGCCGGTGAGCTGAGATATATTCCTCGGTCAATCGGGACGCAGCAT CCCAACGCTTGCGGCAAAGGAGATGGAAGTTGGTGCTTGTGTCACTTGGT GCTGGGGTTCCAGCGTCTGATGATGGTACATACGCACGCTTGCAAGCTGC GCTGTTGTTGGAGGAGAGAGCGTCTAGTTGTGAACAAATATTTGCTCTTC TCGCCCCGTCGGAGCTATCGTCCATTAAATATTTGCTCTCAAGCTAGCCG AGCCGGTTTGAGGCATTGCCCTGGTATACCGAAACCATCGTGTCCGCTCG GAATATCGAGAATCGGGAAAAACATCTCGCCACTACGACCCATCCCACCG CACGGTGCGACTATAATCCAGGGACTTGTTTCCATTCCAAAGTTTTGTTC CTAACCCTGAGCCCATCCTCGTGAACCTCGCTCTTTGCCTTCGTCCCTTG TTAATTTCGTGTGGCCGGCCTTCTTCAGATCCGGGAGTCTGACCTGCCCG CGGTCCACTTCCCCATCGACGGCGTCTACGAAGTAAGGGGTGTCGGGATC GTGGTCGGCGGGACGATGCTCCGGGGCTCGGTAACGGTAAACCAGACGCT GCTCATTGGTCCGGACCGGGCGGGCGACTTCATCCAGGTCACGGTGAGCC GCCAAGCGCTCGTCGCGTGTCCGGCGTTTCGTGTTGCCGTTCCGTTTTTT TTGCTTCCTCTCTCGCTTGGACCCTGCTGTGCATGCTGCCACGCCGAATA CCATGGTATTAGTCGCCTGGCGTCAATGTTGTGTGACCACCGTACGTATC GCGTCACGACAAGCGGACGTCAAGGCAAGGTTGCACTTCTCCGTTGTCTG TGTCCCTGTGCGCCGTCCTGTCGACCACCTTATGTCGTGGTTGGCGTTGT TTGTGCCCTGGAATGTTTCAATTAGTCACTGCCTTGTTTCCATGTCCCGG CGAAGATGTCCAACACTTGCTTTTGTATCCCCCCTCCATTGTTTTGCGGT TCCAGGTCCGAAGCATCGAGTGCAAGCGACAAAGCGTCAAGGAGGCCAAC GAGGGGCAGAGCGCGACGTTCGCCGTGCGCTCGCTCAACCGCCGCGTGGC GCTTCGCCGGTCCACCTTTCGCAAGGTATGTCCTGCCCGCGGCCAAAGGT AGCACGTTCATATGGTAGTGGTCGATTTTCCTGTTTTGTGCTAGAGAGTA CTCGTCGATGTGCATTCTGTTGTGTATCACCGGAGCGGGTACATCACAGG TACTGCCGAAAGTAAAATAGTGTTGCCGCTTTGCTCCCCAGATTTTTCTA CGCTGACGGAAACGCCCACGAATGACACCTCAGTTAACCCTTAAACAGCG CACCAAACTCTGTCCCACATCCGAAGTGTAGCACGCAAGACGATTCGGTA TGCATGCACCCTACGGTCCATACCCAACGCGGGTCACACCCAACGCACGA CGTTTTCCTCGCCGCCCGCCCCCCCTCCGCTGCCCCCCGACCGTAAATCG ACAACAAGGGGATGGTGGCAATCGACGGGCAGGACGACCCCCGCGCAACA CGCGAGTTCGAGGCGGACGTGGTAATCCTCCACCACTCCACCACGGTCGC TCCGGGATACCAGCCGGTCATCCACTGCGGAGTAGTCCGGCAGGCGGCGG CGATACTGTCCATGTCCGGAACCGAGTCTGGGATGGAGGCATTACGAACA GGACAAACAGCAACGGTCCGGTTCAGGTTCATGGTGAGAGAGAGGGGGGT GCGTGCCTCGCGCGCGCGTGTGTGTGTTTCTTGAATTTGCGTCGAAGCGA AATGAGGGTACCGGGTTTTTGCGTTTGCGCGGAGTGGACATGTCATGCGC CAAACGGGGGCGTTTTGAGAATATGAATTGTGATTCGGAAGGTTGGGTGA ATAAGTCAATAGCCGGGTCTCTCCTTGCTCACCTAAACCAATGCGTTTTG TTGTGCACGACAGCAATTTCGTTCTTCCTCTTTCTTCAAGTATTTTTGTG TCTCTGTATGTACATAGCAGTAGCGACCATTCGTAGTGGTAGACTCACTC ACGGCACCATCGTCACCAAATGCATCAGGCGATTCTCGTACACGACACGC CGTCTTGCACCTCAAGCATCCTTGTCGCCAAGGATTTGATGGTTGCGATG GCCGCGGGCGCCGTGGTTCTCCCGCCAGCCCCATCCACCGCTCAACTAAC GCGTGTGTTCTCCTCTCGCCGTGCGCGTGCAGTACTACAGCGAGTACATG GTTCTCGGCAGCACGTTCCTCTTCCGCGAGGGGCGTGCCAAGGGCATCGG AAAGATCCGGCGGGTAATAAACTAACGCGTGGCATTTGGTAGCGGAGCCG AAGAAAGGGAGGGCGGCCACTTCGCAAGGACTTCTCGGGATTCGATGCCC GTGTTTTTTCTGCCTCCGCGGCCACGCGGTCTTTCTCGCGGGACGAGGTG GCTTCTTGTTCGCTCTTTTTCGGGTGCTTGCGTCAGGTAGATCGGTGTGG GCGTTCGGTCGTGCTATGTAGGAATGGTCTGTGGCGCGGGAGAGGCTCTT TGTTGGTGTGGTGTGTGGCCGTCTCTTTGTCTCTGCTGCCGCGGGGCGAA CTTTGTCAATTGAATGTAGCAAAGGAATCGTTAGCTTATACATGGTGTTG TTGAAAAAAAAAAAATAGACACATATTTGTATTGGATTGCACGGCATATA CGTACGTGACGAGGTGCATGTCGTACGACCGTGATATGAGAGGGAAACGA GAGCGGGAATGAGAGATGTAGATACGCCTGCGCGGGCGTTCCATTGTGGT GGAAATAAGAATGGTTGCTTGCATCGGATCATTTTTTCTCTGATCCGCCC CAAGTCTTGACACTGAGGGAAATGTAGGGCTGTGAAAGGAACCATAAATA CATACCTGGTAGAATATTGTATGATAGGAAACAAGGGGGGGGGGGTTACG TGAAATCGTGCTGGTGAAGGACGAGTGTGCAGATGCGGTTAGGATTCGCG AGATGAGGCTGGGCTGCCCGACCTATCTGTTCGTTGTTGACTCGAGTATC GCAATGCTCCGGGCATCAGAGAGCTCTTGCGAGGAACCCGTGGCAATGTT GGGGCGGTCGTTGATTGGATTGGTTCAGAACTGCGCTTCAGAACTAGTGT CCAACTGGACTTGAGTTTAAGCCGGAGGCGGAGGGAGGGGGGACGTGGAG GAAGCGGGAGGGTAGTAGTCGGTGACCTCCGTTGTAGGAATCATGCGCGT GTATAGACATAGGTTGGCAAGTTTCGGTAGTGCGTTTGTGCACAATATAA CACCGTGCTATGGTTGGTTGTGTATGAGAGGCAACGCTTGCCCCCCATGT CTTGGAAGAGGGATGTGGGTAGCTCCTTAGGTCTACTGCACGCGAGAGAA TTTCAACAGGGGTGTGGAAATGGTAGCTGTTAGTGTGTAGACTATTATGG CTTCCTTGTTTACGTTTTGAGTGCATGGCGCGGCTGGTTGTGCGCGTTCA GAGCGCAACTACTGCTGTACAGTATATCCGAGTCCAGACTCGATACATCG AAGACCGTTAATAAAAATATAGGAGTATGTAGTGGATTTTTCACAGCGCC CCAATTTTCAGTTTCTCGATTGAAGGCGTGAGGGAACGCTGCACGGTTGG TTGTTGACCCGTTTTGTATCATTGGCGCGGCGTGACGGAGTCGCGTTTCT GTTTGCGCAACAACAAAATAAGCCCAGTACGCAGTTGGTTTTACCATTCA TTGTAAAGACTTCAACACATCCCCTTCGACTGTGGCTTTTTCTCGAACGG GTAGTCTTTCGGTGTTTGTA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:250093..257712+

>mRNA_E-siliculosus-1a_M_contig94.17420.1 ID=mRNA_E-siliculosus-1a_M_contig94.17420.1|Name=mRNA_E-siliculosus-1a_M_contig94.17420.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3234bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:250093..257712+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCCACCTTCTCCAACCTGTCTTCGTTAGGAGACCACATCGAGAAAGA
CGACGACCGGTTACAGATGGCCACCTTCTCCAACCTGTCTTCGTTAGGAG
ACCACATCGAGAAAGACGACGACCGGTTACAGGTTGGTCACTCGTCCTCT
GGCGGCGACGAGCGATTACGCGGGCCAGAAGCGATGGCGGGGGGTGGCGA
CAATAGCAAGGTCAAAGCAGGAGACCCGTTAGCCCAAGCAGCAGCAGCAG
CAGTGGCAACGGTGGCGGTAGCCGGGGATGAAGACGGAAAAAGCGCGTCA
GCGCCAGCGGCCGGGGCGGGCGGAGCGAAACTGGACGAGAGTGCGGACGT
GCTCAAGCCCCCAGAGTCCAGCAGCGTTGACATCCGTATCGCCATGATCG
GAAACGTAGACAGGTTGGTCACTCGTCCTCTGGCGGCGACGAGCGATTAC
GCGGGCCAGAAGCGATGGCGGGGGGTGGCGACAATAGCAAGGTCAAAGCA
GGAGACCCGTTAGCCCAAGCAGCAGCAGCAGCAGTGGCAACGGTGGCGGT
AGCCGGGGATGAAGACGGAAAAAGCGCGTCAGCGCCAGCGGCCGGGGCGG
GCGGAGCGAAACTGGACGAGAGTGCGGACGTGCTCAAGCCCCCAGAGTCC
AGCAGCGTTGACATCCGTATCGCCATGATCGGAAACGTAGACAGCGGGAA
GTCCACCTTGATCGGGGTTCTATCCAGCTCTGGCCTGGATGATGGCCGCG
GCGCAGCGCGTAGCTTGGTACTTCGCCACCGCCACGAGCAGGAGAACGGC
CGCACCTCCGCCGTGACGATGGAGATCATGGGGTATGCGAAGGACGGCAA
GCAGCGGGAAGTCCACCTTGATCGGGGTTCTATCCAGCTCTGGCCTGGAT
GATGGCCGCGGCGCAGCGCGTAGCTTGGTACTTCGCCACCGCCACGAGCA
GGAGAACGGCCGCACCTCCGCCGTGACGATGGAGATCATGGGGTATGCGA
AGGACGGCAAGCAGGTTGTCCCGACAGCGAGGTCGCACCTCCAGCGGTGG
GCGGAGGTGGTGAACCACAGCGACCGCAGCGTGACCCTCATCGACCTCTG
CGGGCACGAGAAGTACCTCAAGACGACTGTGTTCGGCCTCACTGGTTGTC
CCGACAGCGAGGTCGCACCTCCAGCGGTGGGCGGAGGTGGTGAACCACAG
CGACCGCAGCGTGACCCTCATCGACCTCTGCGGGCACGAGAAGTACCTCA
AGACGACTGTGTTCGGCCTCACTGGTTTGATGCCGGACTTCTGCCTGCTT
GTGGTCGGGGCGAACATGGGCGTGCAGCGGATGACAAAGGAGCACATCAG
CATCGCCTGCGCACTACAGGTTTGATGCCGGACTTCTGCCTGCTTGTGGT
CGGGGCGAACATGGGCGTGCAGCGGATGACAAAGGAGCACATCAGCATCG
CCTGCGCACTACAGATTCCCATCGCTGTGGTGGTGACGAAGGTTGACATC
TGCCCGCCGACGGTCCTCAAGCAGACCCGGCAGGCGTTGGCGAAGTACCT
TCGGCAGAACCAGAAGATGCCTTACCCCATCAAGGACGTGAACCAGATTC
CCATCGCTGTGGTGGTGACGAAGGTTGACATCTGCCCGCCGACGGTCCTC
AAGCAGACCCGGCAGGCGTTGGCGAAGTACCTTCGGCAGAACCAGAAGAT
GCCTTACCCCATCAAGGACGTGAACCAGGTGGACGCAGCGGCGGAGAGCA
TCGCTTCCGACCGCATCACGCCGGTGTTCGCCGTGTCCAACGTGACCGGA
ATGGGTCTGCCCCTGCTGCGCGCTTTCGTGGCGCGATTACGGCGCAACAA
ATCCAGGAATGACGACCCTACAATGCCGGTGGACGCAGCGGCGGAGAGCA
TCGCTTCCGACCGCATCACGCCGGTGTTCGCCGTGTCCAACGTGACCGGA
ATGGGTCTGCCCCTGCTGCGCGCTTTCGTGGCGCGATTACGGCGCAACAA
ATCCAGGAATGACGACCCTACAATGCCGATCCGGGAGTCTGACCTGCCCG
CGGTCCACTTCCCCATCGACGGCGTCTACGAAGTAAGGGGTGTCGGGATC
GTGGTCGGCGGGACGATGCTCCGGGGCTCGGTAACGGTAAACCAGACGCT
GCTCATTGGTCCGGACCGGGCGGGCGACTTCATCCAGGTCACGATCCGGG
AGTCTGACCTGCCCGCGGTCCACTTCCCCATCGACGGCGTCTACGAAGTA
AGGGGTGTCGGGATCGTGGTCGGCGGGACGATGCTCCGGGGCTCGGTAAC
GGTAAACCAGACGCTGCTCATTGGTCCGGACCGGGCGGGCGACTTCATCC
AGGTCACGGTCCGAAGCATCGAGTGCAAGCGACAAAGCGTCAAGGAGGCC
AACGAGGGGCAGAGCGCGACGTTCGCCGTGCGCTCGCTCAACCGCCGCGT
GGCGCTTCGCCGGTCCACCTTTCGCAAGGTCCGAAGCATCGAGTGCAAGC
GACAAAGCGTCAAGGAGGCCAACGAGGGGCAGAGCGCGACGTTCGCCGTG
CGCTCGCTCAACCGCCGCGTGGCGCTTCGCCGGTCCACCTTTCGCAAGGG
GATGGTGGCAATCGACGGGCAGGACGACCCCCGCGCAACACGCGAGTTCG
AGGCGGACGTGGTAATCCTCCACCACTCCACCACGGTCGCTCCGGGATAC
CAGCCGGTCATCCACTGCGGAGTAGTCCGGCAGGCGGCGGCGATACTGTC
CATGTCCGGAACCGAGTCTGGGATGGAGGCATTACGAACAGGACAAACAG
CAACGGTCCGGTTCAGGTTCATGGGGATGGTGGCAATCGACGGGCAGGAC
GACCCCCGCGCAACACGCGAGTTCGAGGCGGACGTGGTAATCCTCCACCA
CTCCACCACGGTCGCTCCGGGATACCAGCCGGTCATCCACTGCGGAGTAG
TCCGGCAGGCGGCGGCGATACTGTCCATGTCCGGAACCGAGTCTGGGATG
GAGGCATTACGAACAGGACAAACAGCAACGGTCCGGTTCAGGTTCATGTA
CTACAGCGAGTACATGGTTCTCGGCAGCACGTTCCTCTTCCGCGAGGGGC
GTGCCAAGGGCATCGGAAAGATCCGGCGGGTAATAAACTAATACTACAGC
GAGTACATGGTTCTCGGCAGCACGTTCCTCTTCCGCGAGGGGCGTGCCAA
GGGCATCGGAAAGATCCGGCGGGTAATAAACTAA
back to top