mRNA_E-siliculosus-1a_M_contig94.17411.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17411.1
Unique NamemRNA_E-siliculosus-1a_M_contig94.17411.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: D7FIP7_ECTSI (N-acetylglucosaminylphosphatidylinositol deacetylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP7_ECTSI)

HSP 1 Score: 459 bits (1180), Expect = 6.960e-161
Identity = 235/253 (92.89%), Postives = 237/253 (93.68%), Query Frame = 2
Query:  197 MTATPSYALRGPVGVVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCYGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTRMHVPXXXXXXXXHR 955
            M ATPSYALRG VGVVIAHPDDESMFFAPTLTTL R GQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDD+VVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTR  TRHTASI  GSGSSSSSS LDAFALVTTG+LRKYSGMLDMPWSLAT YGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTF RMHVP    XXX HR
Sbjct:    1 MAATPSYALRGTVGVVIAHPDDESMFFAPTLTTLGRRGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDVVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRAVTRHTASIAEGSGSSSSSSTLDAFALVTTGILRKYSGMLDMPWSLATSYGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFIRMHVPPPPLXXXPHR 253          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: A0A2P6TVW9_CHLSO (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVW9_CHLSO)

HSP 1 Score: 181 bits (459), Expect = 5.150e-52
Identity = 103/231 (44.59%), Postives = 136/231 (58.87%), Query Frame = 2
Query:  239 VVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCY------GPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTR 913
            +V AHPDDE+MF+APT+  L   G R A+LCLS+G+  GLGQ R REL +AC +LG+   D+ +++ P+LQDG  + WPADVV+ HV   VQ+     + TFD GGVSGH +H AV  GV  +     +            SSSS+S    + L T G+LRKY+ +LD P + AT        G    A+      R A  A+ AH SQ VWYRRL+++ SRY YVNT  R
Sbjct:   12 LVTAHPDDEAMFWAPTILALVEQGLRVALLCLSTGNADGLGQLRSRELYRACSLLGMRRQDVTIVDDPQLQDGMQQRWPADVVAEHVAAAVQRLQPSRVYTFDAGGVSGHPNHLAVCAGVLRWWAAAPS------------SSSSASLPQLWQLETVGLLRKYAALLDAPLAWATTALQRQRRGRGQAAWHLCRQPRRAQQALLAHSSQMVWYRRLWLLLSRYMYVNTLVR 230          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: E1Z3W5_CHLVA (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z3W5_CHLVA)

HSP 1 Score: 175 bits (444), Expect = 7.480e-50
Identity = 101/232 (43.53%), Postives = 134/232 (57.76%), Query Frame = 2
Query:  242 VIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWS----LATCYGPPLG----AFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTR 913
            V AHPDDESMFFAP +  L   G +  +LCLS+G+ +GLGQ R +EL  AC +LG+E DDIV+++ P L DG  + WP  VV++HV   V++F  Q + TFD GGVSGH +H A   GV  +             TG   SSS S+  + + L T G+ RKY  +L++P S    L   +  P              R AW A+ AH SQ VWYRRL+++ SRY Y+NTF R
Sbjct:    5 VTAHPDDESMFFAPAILRLVEQGLQVVLLCLSTGNAHGLGQLRSQELRHACSLLGIEADDIVLVDDPSLPDGMLQQWPPAVVATHVAQAVRRFKPQQVYTFDAGGVSGHPNHLATCAGVLRWW------------TGTPSSSSLSNLPELWQLETVGLPRKYLALLEVPLSHLLTLLRRWQKPHPQKSLCIVVRARPRQAWRALLAHRSQMVWYRRLWLVMSRYMYINTFVR 224          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: A0A836C9C4_9STRA (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9C4_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.060e-47
Identity = 101/232 (43.53%), Postives = 130/232 (56.03%), Query Frame = 2
Query:  236 GVVIAHPDDESMFFAPTLTTLERGGQRAA----VLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDM--PWS--LATCYGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTF 907
            G+VIAHPDDE+MFF PTL  L  GG   +    VLCLS+G+F GLG+ R +EL+ +C   G+  D++ V+    LQDG  E WPA+ V+ +V  FVQ+  I  +LTFD+ GVSGH +H AV RGV   L T  A                      + L +  + RKY G+LD+   W   L  C          S   R  W AMAAH SQ VW+RRLF++FSRY YVNT+
Sbjct:   13 GLVIAHPDDEAMFFGPTLKAL--GGASPSIVVHVLCLSTGNFCGLGKLRHQELLLSCSRFGISMDNVEVVNDAALQDGKDECWPAEAVARYVGSFVQRRSIDLLLTFDQHGVSGHPNHIAVCRGVTTLLHTCKARLP-----------------PVYVLQSVSLARKYIGVLDVLGTWQSRLHRCV---------SLDPRQIWCAMAAHRSQLVWFRRLFMLFSRYTYVNTY 216          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: A0A6A5BWQ8_NAEFO (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BWQ8_NAEFO)

HSP 1 Score: 171 bits (434), Expect = 8.560e-47
Identity = 100/252 (39.68%), Postives = 139/252 (55.16%), Query Frame = 2
Query:  233 VGVVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGV---------------------EEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALF---LRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCYGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTRM 916
            VG++I+HPDDE+MFF P + +L        +LCLS+G+  GLGQ R REL ++C  LGV                     E + IV+++H +L+DG  + W  ++++  V+ FVQKF I TILTFDE G+S H +H A   GV  F           H                +D F L T+ ++RKY G+LD+  SL       +  F  + S   AW AM AHHSQFVW+R+LFV+FSRY +VNTFT++
Sbjct:  123 VGIIISHPDDEAMFFTPIIVSLVEQNIPIHILCLSTGNVLGLGQERIRELERSCIELGVCNSNSDSSLSLVKSLSDLIRSENNKIVIVDHDELKDGMRQTWNTELIAQLVYKFVQKFNISTILTFDERGISDHPNHIATWNGVREFKIRCEREKCFNH----------------VDVFQLETSSLIRKYLGVLDLIVSLHKNSDHNVTIF--TPSPLFAWKAMRAHHSQFVWFRKLFVLFSRYTFVNTFTKL 356          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: C5YAR1_SORBI (N-acetylglucosaminylphosphatidylinositol deacetylase n=4 Tax=Andropogoneae TaxID=147429 RepID=C5YAR1_SORBI)

HSP 1 Score: 167 bits (423), Expect = 2.930e-46
Identity = 94/228 (41.23%), Postives = 131/228 (57.46%), Query Frame = 2
Query:  239 VVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCYGPPLGAFFSSCSARIA--WAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTRM 916
            +V+AHPDDESMFFAPT+  L+  G    +LC+S GD  GLG TRK EL  AC  L +  + + V++HPKLQDG  E W   +V+      VQ +GI TI+TFD  GVSGH +H  ++ GV  FL              G G+       + + L +  +LRKYSG +D+  S    +     + ++  ++R +  + AMAAH SQ+VW+RRLFVIFS Y Y N   ++
Sbjct:   53 LVVAHPDDESMFFAPTILFLKSKGHSIHILCMSRGDADGLGNTRKEELYHACDTLKIPHEQVKVLDHPKLQDGFHEKWDHGLVAELTVQHVQLWGIDTIVTFDSYGVSGHPNHKDLHHGVCKFLHAN-----------GQGND------ETWELASLNILRKYSGPVDIWLSSLISFSRSKQSIYTVVNSRPSKSYEAMAAHRSQWVWFRRLFVIFSSYTYANVLKKI 263          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: A0A6I9SBQ7_ELAGV (N-acetylglucosaminylphosphatidylinositol deacetylase n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9SBQ7_ELAGV)

HSP 1 Score: 166 bits (421), Expect = 5.340e-46
Identity = 85/229 (37.12%), Postives = 138/229 (60.26%), Query Frame = 2
Query:  239 VVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCYGPPLGAFFSSCSA--RIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTRMH 919
            +V+AHPDDESMFFAPT+  L   G    +LC+S+G+  G+G  RK EL +AC VL +    + +++HP LQDG    W   ++S+ + D ++ + I +++TFD+ GVSGH +H AV+ G+ + L                 S +S   ++A+ L++T +LRKYSG +D+  S+      P    +   ++  R ++ AMA H SQ++W+R+LFV+FS Y Y+NT  +++
Sbjct:   48 LVVAHPDDESMFFAPTILFLTSEGHNPHILCMSTGNAEGVGNVRKEELYRACAVLKIPLQQVKILDHPDLQDGFNNQWDHKLLSTIIEDEIKMWDIDSLITFDKFGVSGHPNHRAVHHGICMLL-----------------SDNSKRNIEAWELISTNILRKYSGPVDIWLSILCSLSNPGRQMYCIPNSLPRKSYRAMAEHESQWIWFRKLFVLFSNYTYMNTLRKIN 259          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: A0A1J3HJH8_NOCCA (N-acetylglucosaminylphosphatidylinositol deacetylase (Fragment) n=4 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3HJH8_NOCCA)

HSP 1 Score: 165 bits (417), Expect = 1.450e-45
Identity = 95/248 (38.31%), Postives = 137/248 (55.24%), Query Frame = 2
Query:  185 FWGAMTATPSYAL----RGPVGVVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCYGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTRM 916
            F+G  +++ S  L    +  V  VIAHPDDESMFF+PT+  L   G    VLCLS+G+ +G+G  R  EL +AC VL V    + +++HP LQDG  + W  D++++ + + V    I  I+TFD  GVSGH +H  V+RGV  FL+T                      + A+ L +  + RKY G +D+  S+ +  G P  A   +   R ++ AMA H SQ+VW+R+LFV FS Y Y NT  R+
Sbjct:   15 FFGGTSSSKSAILDDGEKKNVMFVIAHPDDESMFFSPTINYLSSNGYNLHVLCLSTGNAHGMGSIRNDELHRACAVLKVPLKQLKILDHPNLQDGFGQVWGHDLLTNIIEEEVTNHNIHMIITFDNYGVSGHCNHRDVHRGVLKFLQTNSGRN-----------------IKAWELASLNIFRKYLGPVDIWLSILSNKGDPSRAIIVNEHPRKSFEAMAQHLSQWVWFRKLFVSFSSYTYANTLQRI 245          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: L8GUD7_ACACA (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GUD7_ACACA)

HSP 1 Score: 166 bits (421), Expect = 1.630e-45
Identity = 107/257 (41.63%), Postives = 145/257 (56.42%), Query Frame = 2
Query:  218 ALRGPVGVVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYG--LGQTRKREL-VKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASI-------------------TGGSGSSSSSSA-LDAFALVTTGMLRKYSGMLDMPWSLATCYG-----PPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNT 904
            A RGP+  VIAHPDDE+MFF P++  L +  +   +LCLS+GD+ G   G+ R +EL   A GVLG+++ DI +I+  +L+DG    W  D ++  V  +V + G++T++TFDEGGVS H +H AV  GVA FL    +T  ++                     T  + S     A L  F L TT ++RKY G LD+ WS  T  G     P   AF+S      A  AM AHHSQ+VW+RRL V FSRY+YVNT
Sbjct:   45 ARRGPILFVIAHPDDEAMFFVPSILALAQSNRSIHLLCLSTGDYEGPSTGKVRTKELYASASGVLGIKKADIKIIDDEELRDGPLNRWNEDRIARIVKAYVDEQGVETVITFDEGGVSAHPNHIAVFHGVARFLALHASTTPSSXXXXXXXXXXXXXXXXXXXXXTAATASPPVPRAELRGFKLETTNLVRKYVGPLDVVWSSLTAQGEMFVAPGWLAFWS------AHRAMQAHHSQYVWFRRLSVPFSRYSYVNT 295          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: UPI00053A6B1D (probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase n=4 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A6B1D)

HSP 1 Score: 164 bits (415), Expect = 3.810e-45
Identity = 97/251 (38.65%), Postives = 139/251 (55.38%), Query Frame = 2
Query:  185 FWGAMTATPSYAL-------RGPVGVVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCYGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTRM 916
            F+GA +++ +  L       +  V  +IAHPDDESMFF+PT+  L        +LCLS+G+  G+G TRK EL +AC VL V    + V++HP LQDG  + W  D+++  + + V K  I TI+TFD  GVSGH +H  V+RGV  FL+T    RH                + A+ LV+  + RKY G +D+  S+ +    P      +     ++ AMA H SQ+VW+R+LFV FS Y Y NT  R+
Sbjct:   22 FFGATSSSRATILDDGKTPQKKNVMFIIAHPDDESMFFSPTINYLTSNVDNLHILCLSTGNADGMGNTRKDELHQACAVLKVPLQQLKVLDHPNLQDGFGQVWNHDLLTEIIEEEVTKHDIHTIITFDNYGVSGHCNHRDVHRGVLTFLQTNSG-RH----------------IKAWELVSLNIFRKYCGPVDIWLSILSARKHPSNVIIINEQPWKSFKAMAQHLSQWVWFRKLFVSFSSYTYTNTLNRI 255          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIP7_ECTSI6.960e-16192.89N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
A0A2P6TVW9_CHLSO5.150e-5244.59N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
E1Z3W5_CHLVA7.480e-5043.53N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
A0A836C9C4_9STRA1.060e-4743.53N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
A0A6A5BWQ8_NAEFO8.560e-4739.68N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
C5YAR1_SORBI2.930e-4641.23N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
A0A6I9SBQ7_ELAGV5.340e-4637.12N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
A0A1J3HJH8_NOCCA1.450e-4538.31N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
L8GUD7_ACACA1.630e-4541.63N-acetylglucosaminylphosphatidylinositol deacetyla... [more]
UPI00053A6B1D3.810e-4538.65probable N-acetylglucosaminyl-phosphatidylinositol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:158519..160798 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size762
Model size1045
Exons4
Ec32 orthologEc-27_000570.1
Ec32 ortholog descriptionPutative deacetylase LmbE-like domain
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.H
EC3.5.1.89
EggNOG OGsCOG2120@1,KOG3332@2759
EggNOG free text desc.N-acetylglucosaminylphosphatidylinositol deacetylase activity
GOsGO:0000225,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016254,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019538,GO:0019637,GO:0031224,GO:0031984,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0071704,GO:0090407,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509
KEGG ModuleM00065
KEGG Pathwayko00563,ko01100,map00563,map01100
KEGG ReactionR05917
KEGG koko:K03434
Preferred namePIGL
Seed eggNOG ortholog2880.D7FIP7
Seed ortholog evalue3.4e-127
Seed ortholog score461.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17411.1prot_E-siliculosus-1a_M_contig94.17411.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig94 158606..160602 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936493.81264-UTR-E-siliculosus-1a_M_contig94:158518..1586051622936493.81264-UTR-E-siliculosus-1a_M_contig94:158518..158605Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig94 158519..158605 -
1696251103.5576138-UTR-E-siliculosus-1a_M_contig94:158518..1586051696251103.5576138-UTR-E-siliculosus-1a_M_contig94:158518..158605Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig94 158519..158605 -
1622936494.06477-UTR-E-siliculosus-1a_M_contig94:160602..1607981622936494.06477-UTR-E-siliculosus-1a_M_contig94:160602..160798Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig94 160603..160798 -
1696251103.618995-UTR-E-siliculosus-1a_M_contig94:160602..1607981696251103.618995-UTR-E-siliculosus-1a_M_contig94:160602..160798Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig94 160603..160798 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936493.8255806-CDS-E-siliculosus-1a_M_contig94:158605..1590311622936493.8255806-CDS-E-siliculosus-1a_M_contig94:158605..159031Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 158606..159031 -
1696251103.5734575-CDS-E-siliculosus-1a_M_contig94:158605..1590311696251103.5734575-CDS-E-siliculosus-1a_M_contig94:158605..159031Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 158606..159031 -
1622936493.8407888-CDS-E-siliculosus-1a_M_contig94:159540..1596571622936493.8407888-CDS-E-siliculosus-1a_M_contig94:159540..159657Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 159541..159657 -
1696251103.584367-CDS-E-siliculosus-1a_M_contig94:159540..1596571696251103.584367-CDS-E-siliculosus-1a_M_contig94:159540..159657Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 159541..159657 -
1622936493.9300084-CDS-E-siliculosus-1a_M_contig94:159967..1600411622936493.9300084-CDS-E-siliculosus-1a_M_contig94:159967..160041Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 159968..160041 -
1696251103.5979862-CDS-E-siliculosus-1a_M_contig94:159967..1600411696251103.5979862-CDS-E-siliculosus-1a_M_contig94:159967..160041Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 159968..160041 -
1622936493.946698-CDS-E-siliculosus-1a_M_contig94:160457..1606021622936493.946698-CDS-E-siliculosus-1a_M_contig94:160457..160602Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 160458..160602 -
1696251103.608671-CDS-E-siliculosus-1a_M_contig94:160457..1606021696251103.608671-CDS-E-siliculosus-1a_M_contig94:160457..160602Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 160458..160602 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig94.17411.1

>prot_E-siliculosus-1a_M_contig94.17411.1 ID=prot_E-siliculosus-1a_M_contig94.17411.1|Name=mRNA_E-siliculosus-1a_M_contig94.17411.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=254bp
MTATPSYALRGPVGVVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGD
FYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSH
VHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASI
TGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCYGPPLGAFFS
SCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTRMHVPPPPPPPP
PHR*
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mRNA from alignment at E-siliculosus-1a_M_contig94:158519..160798-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig94.17411.1 ID=mRNA_E-siliculosus-1a_M_contig94.17411.1|Name=mRNA_E-siliculosus-1a_M_contig94.17411.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2280bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:158519..160798- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTCTCATCGAGCAAGGACTGCCATCCACTGGACACCTGCAGTACCTCCGT CGCTAATATTGCATCCGCGCTTGGCGTGGGCACGTGCTGCCGCTGTGTGA ACACGGACTTTTGGGAGTGATCCAGCAGGCAGATCTCCGAAAATCTCGTA GATCAGATCGGACCATCCCAGAACGACAGGAGCCTTTTGGGGAGCTATGA CTGCTACCCCATCGTACGCGTTACGAGGACCCGTCGGGGTGGTGATCGCG CATCCAGACGACGAGAGCATGTTCTTCGCTCCGACACTAACGACTTTGGA GCGTGGCGGGCAGCGGGCGGCGGTGCTGTGCTTGTCCTCGGGTAGGCAAG GCCTCTGTTGTTACACCAGGGATACCTCTCTGGCATCTGTAGTATCCCCT AGGTGATGTTCTGAACTCTGAACCCTGTTGTACCCAAATTCCTAGTATTG CTTAAATGACATATGATGTGCTCTGCAGAATATTTACCTTCAACATGAAA CGTTGTTGATCTGCCGAGGATTGAGGCGGTGTGCTCTACTACTACTGCAA ACAGAGTAGTCTAAGGGGATCTGAGAGACGTTTATGGGATGTTTCCGTCT TACGCGCCCACCTGCTTGCGTGTTGAACATATCGCCACCTAGAGCTGATT CATAGATCTGCAAGTAACTTCCAAAGTACATCCATGGCGCTGCTCACCCC AGGGGACTCTCTTTGCGTGCTGCCGATGCCTCGTCTTTCTCCCAACGCAA TCATCAGGTGATTTCTACGGGCTTGGTCAAACGCGCAAGCGCGAGCTCGT GAAAGCGTGCGGCGTACTTGGCGTAGAGGAGGTGAGCGCAGGGGCGGATA CCTTACCTTTCGACTTGAGCAGGAAGCTGCCGCATTCCGCGCTCTCAGAA GGGGGGCGAACGGTTTGCGTACAACGGTTTTCGGGTCTCTCTCGTGTCAC GCGTAACTGTGCCGGCGTGTCGGCCATTCCAGGAACAGGCGCGCTTTCTG AGTGCATTTACCAAAAGACACGACAACGTGTCGTGCCGTCTAGCAAGCAA TCCCGAAACGTATTTCTCTACGACGCTTAATCCTGCCACATGTGCGGCTC AACGGTTTGTCTTCCGCCTCTCCTTGTCTCGCGTGTTGAAGGACGACATC GTGGTCATCGAACACCCCAAGCTCCAGGATGGGAGCACGGAGGCCTGGCC TGCAGACGTGGTGTCCTCTCACGTGCACGACTTCGTGCAGAAGTTTGGAA TCCAAACGGTGAGAGATGCGCGTTTCTTGGTGCACCTGTACAAGGCTTGT GATGAGAGGGTTGATAGATTTGTCGTATCGACACAATGGAAAGGACCATT CGGTGGGGACGTTTTCCTTCGTGGCAATCGCGGAAGTACAGAAAACAACC GTGCGGATTTTCGTGTCGTGGACACGCCCCTGCGTGCCCTCTTGTCACCA ACAAGCTGCCCCTCTCTGGCCGTGTGGTCGCCTCGCCTGACGTCCCAAGT GAATGAGGGGAGCTCAACACATATTTCCCGCTTGCGCTGCTCTAGCGTCT GTTGACCGCTACTGTTCGGCGACGTGTGCCCGACGTATAGAACTACGTTC CTTGTCAGAGTTACACAAGGTTTCATGCTCAAGATATGACAGTGTGCGTA CAAGTGTCGACCTCCAAGGATAATGATCACGTCCGCCCCCAAGAACTCAA GTCGACTCACCTGATCCAAAACTGGTTCCCATGCGTTCCGCATTTTGTTT TATTTTGCACCTTTCAGATTTTGACGTTCGACGAGGGGGGCGTTTCCGGG CACTCTGACCACACCGCTGTCAACCGTGGCGTTGCATTGTTTCTCCGGAC ACGAGATGCGACCAGACATACAGCTAGCATCACCGGCGGTAGTGGTAGCA GCAGCAGCAGCAGTGCTTTAGATGCGTTCGCGCTGGTGACCACGGGCATG CTGCGCAAGTACTCGGGCATGCTTGACATGCCTTGGTCGCTGGCGACATG TTACGGGCCGCCCCTTGGGGCGTTTTTCTCTAGCTGCAGCGCAAGGATAG CCTGGGCGGCGATGGCAGCGCACCACAGCCAGTTCGTTTGGTACCGAAGG CTGTTCGTGATCTTTTCACGTTATGCCTACGTGAACACGTTTACACGCAT GCATGTACCGCCGCCGCCGCCGCCGCCACCACCGCACCGATGATAGGAGG TGGCTTGACTTGTTCAATTCGGCCTGTTGCAGGGTGAATTTCAACCCGCT GGGGCTGAGGGTAAATTATTTGGAATTGAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:158519..160798-

>mRNA_E-siliculosus-1a_M_contig94.17411.1 ID=mRNA_E-siliculosus-1a_M_contig94.17411.1|Name=mRNA_E-siliculosus-1a_M_contig94.17411.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1524bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:158519..160798- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGACTGCTACCCCATCGTACGCGTTACGAGGACCCGTCGGGGTGGTGAT
CGCGCATCCAGACGACGAGAGCATGTTCTTCGCTCCGACACTAACGACTT
TGGAGCGTGGCGGGCAGCGGGCGGCGGTGCTGTGCTTGTCCTCGGATGAC
TGCTACCCCATCGTACGCGTTACGAGGACCCGTCGGGGTGGTGATCGCGC
ATCCAGACGACGAGAGCATGTTCTTCGCTCCGACACTAACGACTTTGGAG
CGTGGCGGGCAGCGGGCGGCGGTGCTGTGCTTGTCCTCGGGTGATTTCTA
CGGGCTTGGTCAAACGCGCAAGCGCGAGCTCGTGAAAGCGTGCGGCGTAC
TTGGCGTAGAGGAGGTGATTTCTACGGGCTTGGTCAAACGCGCAAGCGCG
AGCTCGTGAAAGCGTGCGGCGTACTTGGCGTAGAGGAGGACGACATCGTG
GTCATCGAACACCCCAAGCTCCAGGATGGGAGCACGGAGGCCTGGCCTGC
AGACGTGGTGTCCTCTCACGTGCACGACTTCGTGCAGAAGTTTGGAATCC
AAACGGACGACATCGTGGTCATCGAACACCCCAAGCTCCAGGATGGGAGC
ACGGAGGCCTGGCCTGCAGACGTGGTGTCCTCTCACGTGCACGACTTCGT
GCAGAAGTTTGGAATCCAAACGATTTTGACGTTCGACGAGGGGGGCGTTT
CCGGGCACTCTGACCACACCGCTGTCAACCGTGGCGTTGCATTGTTTCTC
CGGACACGAGATGCGACCAGACATACAGCTAGCATCACCGGCGGTAGTGG
TAGCAGCAGCAGCAGCAGTGCTTTAGATGCGTTCGCGCTGGTGACCACGG
GCATGCTGCGCAAGTACTCGGGCATGCTTGACATGCCTTGGTCGCTGGCG
ACATGTTACGGGCCGCCCCTTGGGGCGTTTTTCTCTAGCTGCAGCGCAAG
GATAGCCTGGGCGGCGATGGCAGCGCACCACAGCCAGTTCGTTTGGTACC
GAAGGCTGTTCGTGATCTTTTCACGTTATGCCTACGTGAACACGTTTACA
CGCATGCATGTACCGCCGCCGCCGCCGCCGCCACCACCGCACCGATGAAT
TTTGACGTTCGACGAGGGGGGCGTTTCCGGGCACTCTGACCACACCGCTG
TCAACCGTGGCGTTGCATTGTTTCTCCGGACACGAGATGCGACCAGACAT
ACAGCTAGCATCACCGGCGGTAGTGGTAGCAGCAGCAGCAGCAGTGCTTT
AGATGCGTTCGCGCTGGTGACCACGGGCATGCTGCGCAAGTACTCGGGCA
TGCTTGACATGCCTTGGTCGCTGGCGACATGTTACGGGCCGCCCCTTGGG
GCGTTTTTCTCTAGCTGCAGCGCAAGGATAGCCTGGGCGGCGATGGCAGC
GCACCACAGCCAGTTCGTTTGGTACCGAAGGCTGTTCGTGATCTTTTCAC
GTTATGCCTACGTGAACACGTTTACACGCATGCATGTACCGCCGCCGCCG
CCGCCGCCACCACCGCACCGATGA
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