mRNA_E-siliculosus-1a_M_contig94.17391.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17391.1
Unique NamemRNA_E-siliculosus-1a_M_contig94.17391.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: D7FIM7_ECTSI (Phosphoglycerate mutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM7_ECTSI)

HSP 1 Score: 566 bits (1459), Expect = 4.100e-204
Identity = 275/280 (98.21%), Postives = 277/280 (98.93%), Query Frame = 1
Query:    1 MVTTTDRDHHDLPAPEETTTSHRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLRSPLPDTLLSAELLSVDGAPARMAAADGEVNAF 840
            MVTTTDRDHH LPAP+ETTTSHRVVFLRHGESTWNRDDRHIGWTDV LTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRY+HVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIV MKVPRATPIVYDLGADMKPLRSPLPDTLLSAELLSVDGAPARMAAADGEVNAF
Sbjct:    1 MVTTTDRDHHHLPAPQETTTSHRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYQHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVTMKVPRATPIVYDLGADMKPLRSPLPDTLLSAELLSVDGAPARMAAADGEVNAF 280          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: UPI000A17839F (2,3-diphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Derxia lacustris TaxID=764842 RepID=UPI000A17839F)

HSP 1 Score: 247 bits (630), Expect = 1.860e-78
Identity = 113/227 (49.78%), Postives = 158/227 (69.60%), Query Frame = 1
Query:   64 HRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLR 744
            H++V +RHGES WN D+R  GWTDV +TE G  EA  AG+ L++EG+ FD+ F SVLKR ++T + V+DELDQLW+P  K +RLNERHYG   G  K E    +G E V +W  +Y +AP+P++ D   +P+ D RY    D D A  +P TEC+KD   RV+ YW+E IAP ++SGK+V++A H N L+ L+++LDGI DD IV++ +P A P+VY+L  D+KP+R
Sbjct:    2 HKLVLIRHGESQWNLDNRFTGWTDVDITENGAREAKAAGQLLKQEGYSFDIAFTSVLKRAIRTLNTVLDELDQLWIPVEKHWRLNERHYGALQGLNKSETAAKYGDEQVLVWRRAYAIAPNPLALDDERHPRFDARY---ADLDPAL-LPATECLKDTVARVLPYWDETIAPTLKSGKKVIIAAHGNSLRALIKYLDGISDDDIVSLNIPTARPLVYELDDDLKPIR 224          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: K1Y1M5_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=uncultured bacterium TaxID=77133 RepID=K1Y1M5_9BACT)

HSP 1 Score: 245 bits (625), Expect = 9.980e-78
Identity = 108/228 (47.37%), Postives = 157/228 (68.86%), Query Frame = 1
Query:   64 HRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLRS 747
            ++VV LRHGESTWN+++R  GWTDV L+E G  EA  AG  L+KEG+ FDV + SVLKR ++T  + +D +D +W+P  +++RLNERHYG   G  K E    FG++ V +W  SYD+ P+P++TD   YP  D RY  + ++     +P+TEC+KD   R + YWE+ IAP V+SGK+VL+A H N L+ L+++LD I DD IV + +P A P+VY+L  ++KP++S
Sbjct:    2 YKVVLLRHGESTWNKENRFTGWTDVDLSETGIKEATNAGLTLKKEGYTFDVAYTSVLKRAIRTLWLTLDTMDLMWIPVYRNWRLNERHYGALQGMNKSETAAKFGEDQVLVWRRSYDIPPNPLTTDDPRYPGKDPRYSDLTEK----TLPKTECLKDTVARFIPYWEDTIAPAVKSGKKVLIAAHGNSLRALVKYLDNISDDEIVKLNIPTAVPLVYELDKNLKPIKS 225          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: A0A521ZBQ9_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A521ZBQ9_9BURK)

HSP 1 Score: 244 bits (624), Expect = 1.410e-77
Identity = 110/227 (48.46%), Postives = 156/227 (68.72%), Query Frame = 1
Query:   67 RVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLRS 747
            ++V LRHGES WN D+R  GWTDV +TE G  EA  AG  LR EGF FDV + SVLKR ++T + V+D +D +W+P +KD+ LNERHYG   G  K E    +G+E V +W  +Y +AP+P+S D   +P+ D RYK++   D    +P TEC+KD   RVV YWE+EIAP +R+GK+V++A H N L+ L+++LD I DD IV + +P A P+VY+L  ++KP+++
Sbjct:    3 KLVLLRHGESQWNLDNRFTGWTDVDITENGWREACTAGDLLRDEGFTFDVAYTSVLKRAIRTLYTVLDRMDAMWIPVVKDWHLNERHYGALQGMDKAETATKYGEEQVLVWRRAYAIAPNPLSLDDKRHPRFDARYKNLKPSD----LPATECLKDTVDRVVPYWEKEIAPQLRAGKKVIIAAHGNSLRGLVKYLDNISDDAIVKLNIPTARPLVYELDDNLKPIKN 225          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: A0A1J4SB84_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Candidatus Desantisbacteria bacterium CG1_02_38_46 TaxID=1817893 RepID=A0A1J4SB84_9BACT)

HSP 1 Score: 244 bits (623), Expect = 2.000e-77
Identity = 114/227 (50.22%), Postives = 154/227 (67.84%), Query Frame = 1
Query:   67 RVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLRS 747
            ++V LRHGES WN+++R  GWTDV L+EKG  EA  AG  L+ EGF FDV F SVLKR ++T  IV+DE+D +W+P    +RLNERHYG   G  K E  E FG+E V +W  SYD+ P  +      YP +D RYK + DE G   IP TEC+KD   R + YW E IAPVV+SGK+V++A H N L+ L+++LD +PDD IV++ +P   P+VY+L  D+KP+++
Sbjct:    3 KLVLLRHGESEWNKENRFTGWTDVDLSEKGIQEAKKAGDVLKSEGFIFDVAFTSVLKRAIRTLWIVLDEMDLMWIPVYNSWRLNERHYGALQGLNKSEMAEKFGEEQVLIWRRSYDIQPPALEKTDERYPGNDPRYKDL-DEKG---IPLTECLKDTVARFLPYWHENIAPVVKSGKKVIIAAHGNSLRALVKYLDNVPDDKIVSLNIPTGIPLVYELDEDLKPIKN 225          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: UPI0003684418 (2,3-diphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Massilia niastensis TaxID=544911 RepID=UPI0003684418)

HSP 1 Score: 244 bits (623), Expect = 2.000e-77
Identity = 110/227 (48.46%), Postives = 151/227 (66.52%), Query Frame = 1
Query:   64 HRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLR 744
            H++VF+RHGESTWN ++R  GWTDV LTEKGEHEA  AG  L++ GF FD+ + SVLKR ++T  + +DE+D +WVP   D+RLNERHYG   G  K E    +G   V  W  SYD  P P+++D L     D RY HV       +IP TEC+KD   RV+  W EEIAP +R+GK+VL++ H N L+ L++ LDG+ D+ IV + +P   P+VY+L A+++P+R
Sbjct:    2 HKIVFMRHGESTWNLENRFTGWTDVDLTEKGEHEARSAGAMLKEAGFSFDLAYTSVLKRAIRTLWLTLDEMDMMWVPVKNDWRLNERHYGALSGLNKAETAARYGDAQVLEWRRSYDTPPPPLASDALGKLSSDPRYAHVP----RTSIPHTECLKDTLARVMPAWNEEIAPEIRAGKKVLISAHGNSLRALIKMLDGLSDEAIVGLNIPNGQPLVYELDAELRPIR 224          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: A0A1C7HIQ3_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A1C7HIQ3_9BURK)

HSP 1 Score: 243 bits (621), Expect = 4.150e-77
Identity = 113/228 (49.56%), Postives = 153/228 (67.11%), Query Frame = 1
Query:   64 HRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLRS 747
            +++V +RHGES WN ++R  GW DV LTEKG  EA LAG+ L+K+GF FD+ + SVLKR ++T  I +DELDQL++P IKD+RLNERHYG   G  K E  E FG E V +W  SYDV P  +S +   +P +  RY+    E     +P TEC+KD  +RVV YWE EI P +R GK++L+  H N L+ L++HLD I D  IV + +P  TP+VY+L  +MKP++S
Sbjct:    2 YKIVLMRHGESQWNLENRFTGWVDVDLTEKGRKEAALAGQLLKKQGFVFDLCYTSVLKRAIRTLCIALDELDQLYLPVIKDWRLNERHYGALQGLNKKETAEKFGNEQVMIWRRSYDVPPPALSKESPMWPANQSRYRLEDPE----LMPLTECLKDTVKRVVPYWENEIVPKIREGKQILITAHGNSLRALIKHLDNISDADIVGLNIPTGTPLVYELDENMKPIKS 225          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: A0A1G3ZHV3_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10 TaxID=1802433 RepID=A0A1G3ZHV3_9BACT)

HSP 1 Score: 243 bits (619), Expect = 8.070e-77
Identity = 110/227 (48.46%), Postives = 153/227 (67.40%), Query Frame = 1
Query:   64 HRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLR 744
            +++V +RHGES WN+++R  GWTDV L+EKG  EA  AG  L++EGF FD+ F S+LKR LKT  IV+DELD+LW+P  + +RLNERHYG   G  K E    +G E + +W  SYDV P P+ T    +P +D RY  V  E+    +P TEC+KD   RV+ YWEE+IAPVVR GK+V++  H N ++ L++HLD + ++ I+   +P   P+VY+L  D+KPLR
Sbjct:    2 YQLVLIRHGESVWNQENRFTGWTDVDLSEKGVIEAKAAGELLKREGFSFDIAFVSLLKRALKTLWIVLDELDELWIPMERSWRLNERHYGALQGLNKSETAAKYGDEKILIWRRSYDVPPPPLETSDERFPGNDPRYADVPKEE----LPLTECLKDTIERVIPYWEEKIAPVVRQGKKVVIMAHGNTIRALMKHLDQLSEEEILHTNIPTGIPLVYELDQDLKPLR 224          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: A0A554WS00_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=5 Tax=Burkholderiales TaxID=80840 RepID=A0A554WS00_9BURK)

HSP 1 Score: 242 bits (618), Expect = 1.920e-76
Identity = 111/227 (48.90%), Postives = 152/227 (66.96%), Query Frame = 1
Query:   64 HRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLR 744
            H++V +RHGESTWN ++R  GWTDV LT  G  +A+ AGR LR+EG++FD+ F SVLKR + T   V+DE+D+ W+P +KD+RLNERHYG   G  K +    +G++ V LW  SYDV P  +  D     + DRRY H+  E     IP TEC+KD   RVV YW+E IAP +R+G+RVL+A H N ++ L++HLDGI D  IV + +P   P+VY+   D++PLR
Sbjct:   18 HKLVLIRHGESTWNLENRFTGWTDVDLTPTGIAQAIAAGRLLREEGWDFDLCFTSVLKRAIHTLWYVLDEMDRTWLPVVKDWRLNERHYGALQGLNKADMARQYGEQQVLLWRRSYDVPPPALQPDDPRGQRHDRRYAHLRPEQ----IPLTECLKDTVARVVPYWDEAIAPAIRAGRRVLIAAHGNSIRALIKHLDGISDADIVGLNIPNGVPLVYEFDDDLRPLR 240          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: A0A350LK84_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Sutterella sp. TaxID=1981025 RepID=A0A350LK84_9BURK)

HSP 1 Score: 241 bits (615), Expect = 3.250e-76
Identity = 113/225 (50.22%), Postives = 153/225 (68.00%), Query Frame = 1
Query:   70 VVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLR 744
            VVF+RHGES WN ++R  GWTDV LTEKG+ EA  AG  +R+ G EFD+ F SVLKR ++T +I +DE D+L++P IKD+RLNERHYG   G  K E  + FG+E V +W  SYDV P  ++ D   YP +D RY   +DE     +P TEC+KD   RV+ YW+E I P V+SG RVLVA H N L+ L++H+DG+ D+ IV + +P   P+VY+   +M+P+R
Sbjct:    4 VVFMRHGESQWNLENRFTGWTDVDLTEKGQAEARKAGALIREAGLEFDIAFTSVLKRAIRTLYIALDETDRLYLPVIKDWRLNERHYGALQGLNKAETAKKFGEEQVHVWRRSYDVPPPALTKDDPRYPGNDPRYA-FLDE---AQLPLTECLKDTVDRVIPYWKETIEPAVKSGMRVLVAAHGNSLRALIKHIDGMTDEAIVGLNIPTGRPLVYEFDDEMRPIR 224          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIM7_ECTSI4.100e-20498.21Phosphoglycerate mutase n=2 Tax=Ectocarpus TaxID=2... [more]
UPI000A17839F1.860e-7849.782,3-diphosphoglycerate-dependent phosphoglycerate ... [more]
K1Y1M5_9BACT9.980e-7847.372,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A521ZBQ9_9BURK1.410e-7748.462,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A1J4SB84_9BACT2.000e-7750.222,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
UPI00036844182.000e-7748.462,3-diphosphoglycerate-dependent phosphoglycerate ... [more]
A0A1C7HIQ3_9BURK4.150e-7749.562,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A1G3ZHV3_9BACT8.070e-7748.462,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A554WS00_9BURK1.920e-7648.902,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A350LK84_9BURK3.250e-7650.222,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:2097..5849 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size843
Model size843
Exons6
Ec32 orthologEc-27_000330.1
Ec32 ortholog descriptionHistidine phosphatase superfamily, clade-1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
EC5.4.2.11
EggNOG OGsCOG0588@1,KOG0235@2759
EggNOG free text desc.regulation of pentose-phosphate shunt
KEGG ModuleM00001,M00002,M00003
KEGG Pathwayko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230
KEGG ReactionR01518
KEGG koko:K01834
KEGG rclassRC00536
Seed eggNOG ortholog2880.D7FIM7
Seed ortholog evalue4.4e-160
Seed ortholog score570.5
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17391.1prot_E-siliculosus-1a_M_contig94.17391.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig94 2097..5849 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936489.641483-CDS-E-siliculosus-1a_M_contig94:2096..23271622936489.641483-CDS-E-siliculosus-1a_M_contig94:2096..2327Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 2097..2327 -
1696251101.5470405-CDS-E-siliculosus-1a_M_contig94:2096..23271696251101.5470405-CDS-E-siliculosus-1a_M_contig94:2096..2327Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 2097..2327 -
1622936489.6545732-CDS-E-siliculosus-1a_M_contig94:2672..28141622936489.6545732-CDS-E-siliculosus-1a_M_contig94:2672..2814Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 2673..2814 -
1696251101.5617583-CDS-E-siliculosus-1a_M_contig94:2672..28141696251101.5617583-CDS-E-siliculosus-1a_M_contig94:2672..2814Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 2673..2814 -
1622936489.6767585-CDS-E-siliculosus-1a_M_contig94:3605..37321622936489.6767585-CDS-E-siliculosus-1a_M_contig94:3605..3732Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 3606..3732 -
1696251101.572494-CDS-E-siliculosus-1a_M_contig94:3605..37321696251101.572494-CDS-E-siliculosus-1a_M_contig94:3605..3732Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 3606..3732 -
1622936489.6945856-CDS-E-siliculosus-1a_M_contig94:4527..46311622936489.6945856-CDS-E-siliculosus-1a_M_contig94:4527..4631Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 4528..4631 -
1696251101.5838795-CDS-E-siliculosus-1a_M_contig94:4527..46311696251101.5838795-CDS-E-siliculosus-1a_M_contig94:4527..4631Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 4528..4631 -
1622936489.7115219-CDS-E-siliculosus-1a_M_contig94:5183..52891622936489.7115219-CDS-E-siliculosus-1a_M_contig94:5183..5289Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 5184..5289 -
1696251101.5984287-CDS-E-siliculosus-1a_M_contig94:5183..52891696251101.5984287-CDS-E-siliculosus-1a_M_contig94:5183..5289Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 5184..5289 -
1622936489.727332-CDS-E-siliculosus-1a_M_contig94:5716..58491622936489.727332-CDS-E-siliculosus-1a_M_contig94:5716..5849Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 5717..5849 -
1696251101.610028-CDS-E-siliculosus-1a_M_contig94:5716..58491696251101.610028-CDS-E-siliculosus-1a_M_contig94:5716..5849Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 5717..5849 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig94.17391.1

>prot_E-siliculosus-1a_M_contig94.17391.1 ID=prot_E-siliculosus-1a_M_contig94.17391.1|Name=mRNA_E-siliculosus-1a_M_contig94.17391.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=281bp
MVTTTDRDHHDLPAPEETTTSHRVVFLRHGESTWNRDDRHIGWTDVTLTE
KGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEI
KDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLY
YPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKR
VLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLRSP
LPDTLLSAELLSVDGAPARMAAADGEVNAF*
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mRNA from alignment at E-siliculosus-1a_M_contig94:2097..5849-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig94.17391.1 ID=mRNA_E-siliculosus-1a_M_contig94.17391.1|Name=mRNA_E-siliculosus-1a_M_contig94.17391.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3753bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:2097..5849- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGTGACCACAACGGACCGAGATCATCACGACTTGCCGGCGCCGGAAGA GACCACCACGTCTCACCGCGTGGTGTTCCTTAGGCATGGGGAGTCGACTT GGAATAGAGACGATCGACACATAGGTTGGACAGGTAAGGGTTGGCGATGC TTTGATGACATGAACCGACCGCTAGTGCAAGCACTACATGCTGTAGCTAA GCTTTTGCGCAGACCGTTCTTGGGATAACGCTGTCTCAAAGGTGCTGCAC GATGGTCAACTCCTCTGTTCGTCATCAGTGGTGCTGTCGAAGTCATTGCA GCACTCCAGCGTGAAGATGCTTGTAGGATGTTATCTCATGAACAATGGAA CTGCTGCTTCTTTCACTTTGCAGACTGCGGACACAGGCACAGCTACAGTG TGACACAGTAGGTACGGTCTCACGCTTTCAAACAGCACCTACAATAAACG ATATATGTGCGAAGTCTACTTCAGCGTGTCGTTCCTCCTATGCATAGCCT ACATCGATTTTCCACCTGTGTACGGGATACACGTTCACTGCTCTGCACAT GGTACGTCAGACGTCACGCTCACCGAAAAGGGCGAACACGAAGCTCTGCT GGCCGGGCGAGCTTTGCGGAAGGAAGGCTTCGAGTTCGACGTGGTGTTTG CATCGGTACTCAAGCGGTGAGCAGCCGACGCCTTTTGGCGTAACCTGTTC TTGTTGTCCGTCGAAACCCGCCCCTGTTCCAAATACCAGCGTAAACTTTA TGCGCAAGGTATACACATGCAGTTTATGGATATCCTCTCCCTGCTCGCTT TTTTGTCACCGGTTCCTCGGACGTACTTCGCTCTCGCGGTGGGCCACGCC CATCGCATGCAACACACGACCCCCATGGCACTTCTTGTTCTCATGCCAGA CAGCGGCCGTGCACATGTTTCGATGCTCGACGTTCCCTCATTGGAAGGCC TACCCGAGTGCACTGCTGCGGTGTTCTTGGACTTGTCAAGCACGCCGAAC GGCTGATGTTGTGCAGGTCGTGCCTGCTCCTTAACGGCGATGCCACTGGC TTGTTTGTTGCACAGACTGCTGCTATGTTCGTCAACTGCGGAGTTTGCGG TGCGAAGCTGCCGCCGTCGCTGCTGCTGCTGCTGCTGCCGCTGCTGCTTC CGCACGGCGTAAGGAATGATAAAACTGCCAAGTGACGTCCTCCTTCGTTC GCCGTTTCGAAAGACTAGGGTGCTCAAAACGGAGCACATCGTGATGGACG AACTCGACCAGCTTTGGGTGCCGGAGATCAAAGACTACCGACTCAACGAG CGCCACTACGGGGACTGCATAGGTGAAGCACAGTTAGCGGTACCCACGCA CGTCCAGGCCCAACCTTATCCTAAGCCAGCTCCCTGCCATGTGGTTGTAG GCCCAACAAGGGAAGTGCCTCCGTGTTTCGCTGTGCGTACCGAGGCAAGT TGAAGGAACACCGCTGCGAGAGAGTACATGAGTGAAAAAGACACGATAGG TGGGGTTGCCGACGCGCTCTTCTCGTGGTGGCGTGCATCCACATGTGTTG CGAGTACGAGGTCCATTCCCGTTCCCGATCTGAGCATCCTCGCTGAACTA TGTTCTATCCCCACCCAAGTTCATGGTTCTTCGACGTTTTCCCTCCGAAA CGTGAGAAGAGTAGACTCAAAAGTGCGTTGGGCGCCGTACATATAAAATG TGATGCCATGCATTTATTTCCGATCATGCAGCGTTGCCCCGATCTTCGAA ATACTTGGTGGTGGCTTGACGTCGAAGCGTTCATGGTCGTAGTTTCAACT GCAGAAGTAACAAGCAGTCTTACCGCTGGGTGGAAAATCTCTCATGTGGT GGCACATTGACCCAGGTTCTTGCCAACTGCTGACGGCATCGCGCAAATTT TGTCTCTGATCCTGTACCACGAACTCTGACTAACAGGGACTTACTCAACT CCCAAAAATGAAAGTTTACGTCCACCAACCAGTCCAACGGAGCGATAGCA GAAAACACGGAATTTTCAGTAACTGATACCGTCCCCCACGCAAGAATTTC TCAGTCATTAGGTACTTAAATGCCACGACTGACGAGTTCTTGACGATACG TTGCGTGGACGCAACAGGTAAGACAAAGCCGGAGGCGGAGGAGGCTTTCG GTAAGGAGAATGTGGCGCTCTGGGCGTCGAGCTATGACGTTGCCCCGCAT CCGATGAGCACTGACGGGCTTTACTACCCCAAGGACGACCGACGGTATGT GTGGCTGTGCGAAGCGTTTCTCCTTAAAAAGGGGCGATTAGCATTTTGAA TGTCCAGATTTCCAAATCTGGACCATAGAGCCTCGACTTGCCGCACAGGA AATAGATTTGGATTTGTGGAAACTTGGAAATGACTGACACCGAATTTTGG AACGAGTTGATGATTTTTTTTTTTTAAATGGAATCAAGTCTGAAGAGTCG AATTTGAAATATTGGAGGCGAAATATTAATAGTTGCTGCATAAACGCCCC TTACCACGGCGTAGACCGCGCGCCATCTGCCAGGTTCTGAGGTAGCACGT TGCGTGTGTGTACCTGTTTTCTTTGTACCGGGTTGACTGCGCTACCGGTT GACTACTGAACATCGATCTGCATCGGGACAAGAAACGGGACCTCGCTTTC TCGTCAGCGGAGCCCCCGGCAGGAGGGCAGCGGAGGAGATTGCTCGACAG CGTCCATTGTCCGTATTCAGAGTAATCGCATCTGCGGTGTATACTCCTGT GCTAGCACCATTGCTTTGCAGTTGATTGCCCTCTCCCCACTCCGTTGGGT CCGTCGCTACTGCAGCTTCAGCATACCTCACCCGTGCGATGTTCTTGTGT CAAAAGTAGTGTGCCTACCACTTGCAGCGGTACAACAGCGCAGTTCTGTT CAGCACATGTCCTTGCTCTCGTGGTGAGCTTTCTTGGGGTCCCTTCTTTT TCGCCCCTTTTTTTCTCATTAACTCCTCCCTTTGGCCGTTCCGCACCCTT CGTCCCCGCAACTGGTGTGCGTGTGATGTTTGAAGGTACAAGCACGTCGT CGACGAAGATGGAGCGTGCGCGATACCCCGGACGGAGTGCATGAAGGATG TGTCCCGCCGCGTGGTGGGGTACTGGGAGGAGGAGATAGCGCCGGTCGTG AGGAGCGGGAAGCGCGTGCTAGTAGCGGTGAGCCAAGCTACACTCCTACA GCCATCAGTCTATTCTTGCCCGGCGTACTTTGATGAAAATGGCGATGGCT AATTCTTTTGTTTGTCGGCACGTGACGTGCTATTATAATAGAGGAATCAT ACAAATTGACACAAATCCATACCGGCTGTGTATAATTTTGCGCCGGTACG TTTTCTGACATGCATCTATTCCTACCGGATAGTGTCTCTTTGCCTGGCTC ATAGGTATCAAGAGGGGTTCACCCGAATATGCTTGGCCGAAACCCCCCCT TTTTGCTCCCCCCCACCAATTTCAGTGATCACCCCCGCCCCCGTCTGCAT TTGTTTCTCCTCGGTCCGCCAGGGTCACGCAAATATGCTCAAGACTCTGC TACAACACCTCGACGGCATACCCGACGACGTGATTGTCGCCATGAAGGTT CCTCGCGCAACCCCCATTGTCTACGACCTGGGCGCCGATATGAAACCGTT GCGATCACCCCTCCCCGACACGCTGTTGAGCGCCGAGCTCCTGTCGGTTG ACGGTGCTCCCGCCCGCATGGCGGCCGCGGACGGAGAAGTGAACGCGTTT TAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:2097..5849-

>mRNA_E-siliculosus-1a_M_contig94.17391.1 ID=mRNA_E-siliculosus-1a_M_contig94.17391.1|Name=mRNA_E-siliculosus-1a_M_contig94.17391.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1686bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:2097..5849- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGTGACCACAACGGACCGAGATCATCACGACTTGCCGGCGCCGGAAGA
GACCACCACGTCTCACCGCGTGGTGTTCCTTAGGCATGGGGAGTCGACTT
GGAATAGAGACGATCGACACATAGGTTGGACAGATGGTGACCACAACGGA
CCGAGATCATCACGACTTGCCGGCGCCGGAAGAGACCACCACGTCTCACC
GCGTGGTGTTCCTTAGGCATGGGGAGTCGACTTGGAATAGAGACGATCGA
CACATAGGTTGGACAGACGTCACGCTCACCGAAAAGGGCGAACACGAAGC
TCTGCTGGCCGGGCGAGCTTTGCGGAAGGAAGGCTTCGAGTTCGACGTGG
TGTTTGCATCGGTACTCAAGCGACGTCACGCTCACCGAAAAGGGCGAACA
CGAAGCTCTGCTGGCCGGGCGAGCTTTGCGGAAGGAAGGCTTCGAGTTCG
ACGTGGTGTTTGCATCGGTACTCAAGCGGGTGCTCAAAACGGAGCACATC
GTGATGGACGAACTCGACCAGCTTTGGGTGCCGGAGATCAAAGACTACCG
ACTCAACGAGCGCCACTACGGGGACTGCATAGGGTGCTCAAAACGGAGCA
CATCGTGATGGACGAACTCGACCAGCTTTGGGTGCCGGAGATCAAAGACT
ACCGACTCAACGAGCGCCACTACGGGGACTGCATAGGTAAGACAAAGCCG
GAGGCGGAGGAGGCTTTCGGTAAGGAGAATGTGGCGCTCTGGGCGTCGAG
CTATGACGTTGCCCCGCATCCGATGAGCACTGACGGGCTTTACTACCCCA
AGGACGACCGACGGTAAGACAAAGCCGGAGGCGGAGGAGGCTTTCGGTAA
GGAGAATGTGGCGCTCTGGGCGTCGAGCTATGACGTTGCCCCGCATCCGA
TGAGCACTGACGGGCTTTACTACCCCAAGGACGACCGACGGTACAAGCAC
GTCGTCGACGAAGATGGAGCGTGCGCGATACCCCGGACGGAGTGCATGAA
GGATGTGTCCCGCCGCGTGGTGGGGTACTGGGAGGAGGAGATAGCGCCGG
TCGTGAGGAGCGGGAAGCGCGTGCTAGTAGCGGTACAAGCACGTCGTCGA
CGAAGATGGAGCGTGCGCGATACCCCGGACGGAGTGCATGAAGGATGTGT
CCCGCCGCGTGGTGGGGTACTGGGAGGAGGAGATAGCGCCGGTCGTGAGG
AGCGGGAAGCGCGTGCTAGTAGCGGGTCACGCAAATATGCTCAAGACTCT
GCTACAACACCTCGACGGCATACCCGACGACGTGATTGTCGCCATGAAGG
TTCCTCGCGCAACCCCCATTGTCTACGACCTGGGCGCCGATATGAAACCG
TTGCGATCACCCCTCCCCGACACGCTGTTGAGCGCCGAGCTCCTGTCGGT
TGACGGTGCTCCCGCCCGCATGGCGGCCGCGGACGGAGAAGTGAACGCGT
TTTAGGGTCACGCAAATATGCTCAAGACTCTGCTACAACACCTCGACGGC
ATACCCGACGACGTGATTGTCGCCATGAAGGTTCCTCGCGCAACCCCCAT
TGTCTACGACCTGGGCGCCGATATGAAACCGTTGCGATCACCCCTCCCCG
ACACGCTGTTGAGCGCCGAGCTCCTGTCGGTTGACGGTGCTCCCGCCCGC
ATGGCGGCCGCGGACGGAGAAGTGAACGCGTTTTAG
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