mRNA_E-siliculosus-1a_M_contig93.17376.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig93.17376.1
Unique NamemRNA_E-siliculosus-1a_M_contig93.17376.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig93.17376.1 vs. uniprot
Match: A0A6H5JJQ2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ2_9PHAE)

HSP 1 Score: 1028 bits (2658), Expect = 0.000e+0
Identity = 596/676 (88.17%), Postives = 606/676 (89.64%), Query Frame = 1
Query:  490 KALGRLFARALQLHPRNPGLWIKAASWEFFDGGNASSARSLMQRGLRINPGARNLWLQYFRLEFSYVEKLMGRREILGLGAEQGGAGDNGQGNXXXXXXXXGRRGMDIPELEAEVGQSGGPSFKAVRKAAGAEGALGGGGGDGARPAPVMNDTARRFYKGSVPMAVFRAAVKAVPADVGFRAGFLRCCAEDFPVLSSEAAQSILTSIERDFPESCEAWEVRASYPQLAAEAAAAAGRDGGRLRSAVVQESVDTFELAVEAVGASQPDMWVRYASFLRGRLEACEGAEERKXXXXXXXXXXXXXXXXXXXXXXXXXXXLAARLREVLARSVEIHLAGGAAPNXXXXXXXXXXXXXXXXXXERGGASLLATRGVSPRPAEELEAPSRRRDEDSREALSAGLADVCLALGEPEEALAALRAATGVLPRRPGPWLRRAALERRLAALGGDPGQAGRTASGGEKPDLGSSSSSAGAAGAGVAAATLRAGIKAVPPAAPGYPDLWRELLASLVASGGGHSKKGKTAVAAAFREAVEACGGGSAGNNAQGEFLAGYVRWSAAVEGPDAARRALQWARRSFLLTGTGAAAAYGEAIELERALGEEAGEEGARAKRVRELFEDSVDKFGRELPAIWEEYAQFEIQEGDVKRANAVRWRSQQQQRTDGGLGGGITSSTGRKKQRWG 2517
            +ALGRLFARALQLHPRNPGLWIKAASWEFFDGGN SSARSLMQRGLRINPGARNLWLQYFRLEFSYVEKLMGRREILGL AE+GGAGDNGQGN XXXX   GRRGMDIPELEAE GQSGGPSFKAVRKAAGAEGALGG   DGARPAPVMNDTARRFYKG+VPMAVFRAAVKAVPADVGFRAGFLRCCAEDFPVLSSEAAQSILTS+ERDFP+SCEAWEVRASYPQLAAEAAAA GRD GRL SAVVQES+DTFELAVEAVGASQPDMWVRYASFLRGRLEACEGA+ RK                    XXXXXXXLAARLREVLARSVEIHLAGGAAPN  XXXXXXXXXXX     ERGGASLLATRGVS  PAE LEAPSRRR+EDSREALSAGLADVCLALGEPEEALAALRAATGVLPRRPGPWLRRAALERRLAALGGDPGQAGR ASG                 A VAAATLRAGIKAV PAAPGYPDLWRELLASLVASG GHSKKGKTAVAAAFREAVEACGGGSAGNNAQGEFLAGYVRWSAAVEGPDAARRALQWARRSFLLTGTGAAAAYGEAIELERALGEEAGEEG RAKRVRELFEDSVDKFGRELPAIWEEYAQFEIQEG+VKRANAVRWRSQQQQ TD G  GG+TSSTGRKKQRWG
Sbjct:    4 QALGRLFARALQLHPRNPGLWIKAASWEFFDGGNTSSARSLMQRGLRINPGARNLWLQYFRLEFSYVEKLMGRREILGLEAERGGAGDNGQGNDXXXXG--GRRGMDIPELEAEAGQSGGPSFKAVRKAAGAEGALGGD--DGARPAPVMNDTARRFYKGAVPMAVFRAAVKAVPADVGFRAGFLRCCAEDFPVLSSEAAQSILTSMERDFPDSCEAWEVRASYPQLAAEAAAA-GRDAGRLGSAVVQESLDTFELAVEAVGASQPDMWVRYASFLRGRLEACEGAKGRKRGGGAVDGGKGGEMVGASAPXXXXXXXLAARLREVLARSVEIHLAGGAAPNDPXXXXXXXXXXXIAARKERGGASLLATRGVSA-PAEGLEAPSRRREEDSREALSAGLADVCLALGEPEEALAALRAATGVLPRRPGPWLRRAALERRLAALGGDPGQAGRPASGXXXXXXXXXXXXXXXXXADVAAATLRAGIKAVSPAAPGYPDLWRELLASLVASGAGHSKKGKTAVAAAFREAVEACGGGSAGNNAQGEFLAGYVRWSAAVEGPDAARRALQWARRSFLLTGTGAAAAYGEAIELERALGEEAGEEGTRAKRVRELFEDSVDKFGRELPAIWEEYAQFEIQEGNVKRANAVRWRSQQQQ-TDSGRAGGVTSSTGRKKQRWG 672          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17376.1 vs. uniprot
Match: A0A835YXJ8_9STRA (U3 small nucleolar RNA-associated protein 6-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXJ8_9STRA)

HSP 1 Score: 300 bits (768), Expect = 2.270e-87
Identity = 178/424 (41.98%), Postives = 244/424 (57.55%), Query Frame = 1
Query:   76 MADSVQYALDRMVVDLEDLRCRGIFSEAEVRAIVSRRKGFEYMLRRHEARRLDYMRYVEYELNLESLRALRTRRVEGGAXXXXXXXXXXXXXKGKAATADFCCVRLVRWIFDRAVMKFPGDVDIWLHYIDFAARQGQSKALGRLFARALQLHPRNPGLWIKAASWEFFDGGNASSARSLMQRGLRINPGARNLWLQYFRLEFSYVEKLMGRREILGLGAEQGGAGDNGQGNXXXXXXXXGRRGMDIPELEAEVGQSGGPSFKAVRKAAGAEGALGGGGGDGARPAPVMNDTARRFYKGSVPMAVFRAAVKAVPADVGFRAGFLRCCAEDFPVLSSEAAQSILTSIERDFPESCEAWEVRASYPQLAAEAAAAAGRDGGRLRSAVVQES--VDTFELAVEAVGASQPDMWVRYASFLRGRLEACE 1341
            M D+VQ  +DRMV DLED++ +G+F+  EVRAI +RR+  EY+ RR +AR++D++RY+EYELNLE LR +R +                                           KFPGDV + L +IDFAA+Q  +K L R+F RALQLHP N GLWIKAASWEFFD  NA +AR L+QR LRIN   + LW+QYFRLE+ Y++K++GR+++LGL  E    G  G G+           G+DIPE++ E G+S GP F  V  A   EG         +R   VM+D  ++FYKG VP+A+FRAA KA+P D+  R   L+ C  +FP LS     +IL S++ DFP S EAW +RA +P L  +     G +   L + V  E   +  FE AV++      D+W++Y+ FL  RL   +
Sbjct:    1 MGDTVQAVMDRMVPDLEDMQRKGVFTREEVRAIAARRRDHEYLARRRQARKVDFLRYIEYELNLEILRKIRRK-------------------------------------------KFPGDVSLCLQHIDFAAKQTSTKILSRIFGRALQLHPHNAGLWIKAASWEFFDCANAVAARVLLQRALRINGVNQRLWVQYFRLEWCYLQKVIGRQQVLGL-IEDDSEGGEGVGDAG---------GLDIPEVQGE-GESSGPDFSQVAAAEQEEGKASQKKRSASRQV-VMSDATKQFYKGGVPLAIFRAARKALPDDIALRGHCLQVCCTEFPELSKHVQSAILDSLKEDFPASAEAWALRAQHPLLVLQ-----GYEDEDLAAVVDAEGQCIQAFEAAVKSSAGDGADIWLQYSQFLHARLSEAD 364          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17376.1 vs. uniprot
Match: A0A6H5K8P6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P6_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 2.450e-84
Identity = 153/167 (91.62%), Postives = 153/167 (91.62%), Query Frame = 1
Query:    1 LAVIRTAVQEDYDGCPLGVDSLRGIMADSVQYALDRMVVDLEDLRCRGIFSEAEVRAIVSRRKGFEYMLRRHEARRLDYMRYVEYELNLESLRALRTRRVEGGAXXXXXXXXXXXXXKGKAATADFCCVRLVRWIFDRAVMKFPGDVDIWLHYIDFAARQGQSKALG 501
            LAVIRT  QEDYDGCP GV S   IMADSVQYALDRMVVDLEDLRCRGIFSEAEVRAIVSRRKGFEYMLRRHEARRLDYMRYVEYELNLESLRALRTRRVEGGA  XXXXXXXXX  KGKAATADFCCVRLVRWIFDRAVMKFPGDVDIWLHYIDF ARQGQSK  G
Sbjct:   15 LAVIRTR-QEDYDGCPPGVGSSVSIMADSVQYALDRMVVDLEDLRCRGIFSEAEVRAIVSRRKGFEYMLRRHEARRLDYMRYVEYELNLESLRALRTRRVEGGASGXXXXXXXXXTKKGKAATADFCCVRLVRWIFDRAVMKFPGDVDIWLHYIDFTARQGQSKVRG 180          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17376.1 vs. uniprot
Match: A0A433Q7W8_9FUNG (U3 small nucleolar RNA-associated protein 6-domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433Q7W8_9FUNG)

HSP 1 Score: 221 bits (564), Expect = 8.670e-61
Identity = 140/363 (38.57%), Postives = 202/363 (55.65%), Query Frame = 1
Query:   76 MADSVQYALDRMVVDLEDLRCRGIFSEAEVRAIVSRRKGFEYMLRRHEARRLDYMRYVEYELNLESLRALRTRRVEGGAXXXXXXXXXXXXXKGKAATADFCCVRLVRWIFDRAVMKFPGDVDIWLHYIDFAARQGQSKALGRLFARALQLHPRNPGLWIKAASWEFFDGGNASSARSLMQRGLRINPGARNLWLQYFRLEFSYVEKLMGRREILGLGAE--------QGGAGDNGQGNXXXXXXXXGRRGMDIPELEAEVGQSGGPSFKAVRKAAGAEGALGGGGGDGARPAPVMNDTARRFYKGSVPMAVFRAAVKAVPADVGFRAGFLRCCAEDFPVLSSEAAQSILTSIERDFPESCEA 1140
            MAD+VQY L++MV +LEDL  +GIFS+AE+++IV +R  FEY L+R  ++++DY+RY EYE+NLE+LR  R  R++                  K + +D+  VR + +IF+R + KF GDV +WL YI+FA   G S+ LG++FA A+Q+HP  P LWI AASWEF +  N  +AR LMQRGLR+N  + +LW +YFRLE  YVEK+  RR+ILG+           + G  D    N        G   +D  +   E G+ G     AVRK    E ++             + +      +G +   V+R A+ A+P ++ FR  F+   A+       E  Q I  SI RDFP++ EA
Sbjct:    1 MADTVQYYLEQMVPELEDLEQKGIFSKAEIKSIVKKRTKFEYALKRRISKKVDYLRYAEYEMNLEALRKKRKVRLD--------------IKSNKTSLSDYAGVRRIYFIFERVLRKFKGDVALWLQYIEFAKGNGASRTLGKIFASAIQMHPTKPSLWIMAASWEFEENANIVAARVLMQRGLRLNSTSTSLWHEYFRLELVYVEKIKARRKILGIDQRSQSTLEELEAGQTDANDDNMIMLPKITGEEFVDEAD---ETGEKG-----AVRKM---EESM----------VEALKENNNPVLEGLLGRIVYRNAIVAIPNNLPFRKKFIDIYADFSDTEMGE--QEIYESIRRDFPQNTEA 326          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17376.1 vs. uniprot
Match: A0A6G0XVP7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVP7_9STRA)

HSP 1 Score: 226 bits (576), Expect = 2.330e-60
Identity = 133/350 (38.00%), Postives = 188/350 (53.71%), Query Frame = 1
Query:   76 MADSVQYALDRMVVDLEDLRCRGIFSEAEVRAIVSRRKGFEYMLRRHEARRLDYMRYVEYELNLESLRALRTRRVEGGAXXXXXXXXXXXXXKGKAATADFCCVRLVRWIFDRAVMKFPGDVDIWLHYIDFAARQGQSKALGRLFARALQLHPRNPGLWIKAASWEFFDGGNASSARSLMQRGLRINPGARNLWLQYFRLEFSYVEKLMGRREILGLGAEQGGAGDNGQGNXXXXXXXXGRRGMDIPELEAEVGQSGGPSFKAVRKAAGAEGALGGGGGDGARPAPVMNDTARRFYKGSVPMAVFRAAVKAVPADVGFRAGFLRCCAEDFPVLSSEAAQSILTSIERDFP 1125
            MAD+VQY +++M+ +LEDL+   IF + E+R IV +R+ FEY ++R   R++D +RY+EYE+NL++LR  R +R+                   K + +DF  ++ V  IFDRA+MK  GDVD+WL +I F    G +K + +LF +ALQLHPRN  +WI+AASWEF    N  SAR LMQR +RINP ++ LW +YFRLE  YV+KL  RRE+LGL A+                       +DI  +E E   SG  +     + +                   +  +      G++P  VF+ AV+A+P D  FR  FL  C    PV +   A  IL S   DFP
Sbjct:    1 MADAVQYIMEKMIPELEDLQTLNIFDKDEIRQIVQKRRDFEYTMKRTPLRKVDCLRYIEYEINLDALRRQRKKRM----------------GLQKKSLSDFAGMQRVHNIFDRALMKHRGDVDLWLQHIAFCKNTGSTKIMSKLFTKALQLHPRNEAIWIEAASWEFASNLNVDSARVLMQRSIRINPHSKKLWHEYFRLELLYVQKLRARREVLGLDAKPQ------------------ESTLDIAPVEGEEVASGAATDAVAEETS------------------AVEKSRHEILHGAIPKIVFQNAVQAIPQDAVFRLDFLTICNLFPPVYAKPVADVILESAGADFP 298          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17376.1 vs. uniprot
Match: A0A433A2E5_9FUNG (U3 small nucleolar RNA-associated protein 6-domain-containing protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433A2E5_9FUNG)

HSP 1 Score: 223 bits (568), Expect = 3.010e-59
Identity = 157/424 (37.03%), Postives = 225/424 (53.07%), Query Frame = 1
Query:   76 MADSVQYALDRMVVDLEDLRCRGIFSEAEVRAIVSRRKGFEYMLRRHEARRLDYMRYVEYELNLESLRALRTRRVEGGAXXXXXXXXXXXXXKGKAATADFCCVRLVRWIFDRAVMKFPGDVDIWLHYIDFAARQGQSKALGRLFARALQLHPRNPGLWIKAASWEFFDGGNASSARSLMQRGLRINPGARNLWLQYFRLEFSYVEKLMGRREILGLGAE--------QGGAGDNGQGNXXXXXXXXGRRGMDIPELEAEVGQSGGPSFKAVRKAAGAEGALGGGGGDGARPAPVMNDTARRFYKGSVPMAVFRAAVKAVPADVGFRAGFLRCCAEDFPVLSSEAAQSILTSIERDFPESCEAWEVRASYPQLAAEAAAAAGRDGGRLRSAV--VQESVDTFELAVEAVGASQPDMWVRYASFL 1317
            MAD+VQY L++MV +LEDL  +GIFS+AE+++IV +R  FEY L+R  ++++DY+RY EYE+NLE+LR  R  R++                  K + +D+  VR + +IF+R + KF GDV +WL YI+FA   G S+ LG++FA A+Q+HP  P LWI AASWEF +  N  +AR LMQRGLR+N  + +LW +YFRLE  YVEK+  RR+ILG+           + G  D    N        G   +D  +   E G+ G     AVRK    E ++             + +      +G +   V+R A+ A+P ++ FR  F+   A+       E  Q I  SI RDFP++ EA     SY  LAA   + A          V  ++  V+ F   VE +  S+  MW  Y  FL
Sbjct:    1 MADTVQYYLEQMVPELEDLEQKGIFSKAEIKSIVKKRTKFEYALKRRISKKVDYLRYAEYEMNLEALRKKRKVRLD--------------IKSNKTSLSDYAGVRRIYFIFERVLRKFKGDVALWLQYIEFAKGNGASRTLGKIFASAIQMHPTKPSLWIMAASWEFEENANIVAARVLMQRGLRLNSTSTSLWHEYFRLELVYVEKIKARRKILGIDQRSQSTLEELEAGQTDANDDNMIMLPKITGEEFVDEAD---ETGEKG-----AVRKM---EESM----------VEALKENNNPVLEGLLGRIVYRNAIVAIPNNLPFRKKFIDIYADFSDTEMGE--QEIYESIRRDFPQNTEA----RSY--LAARHLSRANEVDVENPEFVKGLRSCVEEFGRCVEELPTSE--MWEHYTRFL 379          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17376.1 vs. uniprot
Match: A0A485KQ44_9STRA (Aste57867_10082 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQ44_9STRA)

HSP 1 Score: 223 bits (567), Expect = 4.620e-59
Identity = 138/356 (38.76%), Postives = 189/356 (53.09%), Query Frame = 1
Query:   76 MADSVQYALDRMVVDLEDLRCRGIFSEAEVRAIVSRRKGFEYMLRRHEARRLDYMRYVEYELNLESLRALRTRRVEGGAXXXXXXXXXXXXXKGKAATADFCCVRLVRWIFDRAVMKFPGDVDIWLHYIDFAARQGQSKALGRLFARALQLHPRNPGLWIKAASWEFFDGGNASSARSLMQRGLRINPGARNLWLQYFRLEFSYVEKLMGRREILGLGAEQGGAGDNGQGNXXXXXXXXGRRGMDIPELEAEVGQSGGPSFKAVRKAAGAEGALGGGGGDGARPAPVMNDTARRFYKGSVPMAVFRAAVKAVPADVGFRAGFLRCCAEDFPVLSSEAAQSILTSIERDFPESCEAW 1143
            MAD+VQY +++M+ +LEDL+   IFS+ EVR IV +R+ FEY ++R   R++D +RY+EYELNL++LR  R +R+                   K+  +D   +  V  IFDRA++K  GDVD+WL +I F   QG +K L  LF  ALQ+HPRN  LWI+AASWEF    N  SAR LMQR +RINP ++ LWL+YFRLE  YV+KL  RRE+LGL  ++                      +DI  +E E   +     KA    A A  A+               D+ R    G++P  VF  AV+A+P+D  FR  FL          +   A +IL S   +FP     W
Sbjct:    1 MADAVQYMMEKMIPELEDLQHLKIFSKEEVRQIVQKRRDFEYTMKRTPLRKVDCLRYIEYELNLDALRRQRKKRM----------------GLKKSTLSDHTGISRVHNIFDRALLKHRGDVDLWLQHIAFCKNQGSTKILSLLFTHALQVHPRNEALWIEAASWEFATNLNVDSARVLMQRSIRINPHSQKLWLEYFRLELLYVQKLRARREVLGLDDKKA---------------LPKELSLDIAPVEGEEDDA----SKAADAVADATSAV--------------EDSRREILLGAIPKIVFHNAVQAIPSDAAFRLAFLDITNLFPSAYAKPVADAILASATMEFPTDAAVW 307          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17376.1 vs. uniprot
Match: A0A1Y1Y702_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y702_9FUNG)

HSP 1 Score: 220 bits (561), Expect = 2.920e-58
Identity = 151/420 (35.95%), Postives = 227/420 (54.05%), Query Frame = 1
Query:   76 MADSVQYALDRMVVDLEDLRCRGIFSEAEVRAIVSRRKGFEYMLRRHEARRLDYMRYVEYELNLESLRALRTRRVEGGAXXXXXXXXXXXXXKGKAATADFCCVRLVRWIFDRAVMKFPGDVDIWLHYIDFAARQGQSKALGRLFARALQLHPRNPGLWIKAASWEFFDGGNASSARSLMQRGLRINPGARNLWLQYFRLEFSYVEKLMGRREILGLGAEQGGAGDNGQGNXXXXXXXXGRRG--MDIPELEAEVGQSGGPSFKAVRKAAGAEGALGGGGGDGARPAPVMNDTARRFYKGSVPMAVFRAAVKAVPADVGFRAGFLRCCAEDFPVL--SSEAAQSILTSIERDFPESCEAWEVRASYPQLAAEAAAAAGRDGGRLRSAV-VQESVDTFELAVEAVGASQPDMWVRYASFLR 1320
            MAD+VQY L+ M+ +LEDL  + IF++ E+R+IV +R  FEY L+R   +++DY+RY+EYELNLE+LR  R  R++                KGK + +D+   R V +IF+RA++KF GDV +WL ++DFA R   +K L ++FARA+QLHP  P LWI AASWEF D  N ++AR L+QRGLR+NP ++ LWL+Y RLE  Y+ K+  RR ILG+  +     D  +      XXXX      + +P L+ E         +  R+   ++G +             +      F  G+V + V++ A+K++P D+ FR  FL    E F  +  +    ++I  SI+ DFP    A   RA Y +        AG D   +     V++    F   ++ +G     MW +Y  FL+
Sbjct:    1 MADTVQYHLENMIPELEDLEKKKIFNKEEIRSIVKKRTNFEYALKRRSPKKIDYLRYIEYELNLENLRKKRKARLD---------------IKGKPSVSDYAGPRRVNFIFERALLKFKGDVPLWLQWVDFAKRNKMNKLLSKIFARAIQLHPAKPSLWIMAASWEFEDNLNTTAARILLQRGLRLNPESQELWLEYVRLELVYMAKIRERRRILGILKK-----DQAKPEVEVEXXXXXXXXDMIVLPTLDEEE------EMEPKREITISDGLI-----------QTLKAENNAFLSGAVALIVYQNAIKSIPNDLDFRRKFL----EVFQTIPGTESGQETIYESIKDDFPHDESA---RALYIEKNL-----AGVDPNSVEYINGVKKCTQGFSEVIQELGTGT--MWEKYCEFLK 369          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17376.1 vs. uniprot
Match: A0A024UHP5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHP5_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.010e-57
Identity = 136/357 (38.10%), Postives = 193/357 (54.06%), Query Frame = 1
Query:   76 MADSVQYALDRMVVDLEDLRCRGIFSEAEVRAIVSRRKGFEYMLRRHEARRLDYMRYVEYELNLESLRALRTRRVEGGAXXXXXXXXXXXXXKGKAATADFCCVRLVRWIFDRAVMKFPGDVDIWLHYIDFAARQGQSKALGRLFARALQLHPRNPGLWIKAASWEFFDGGNASSARSLMQRGLRINPGARNLWLQYFRLEFSYVEKLMGRREILGLGAEQGGAGDNGQGNXXXXXXXXGRRGMDIPELEAEVGQSGGPSFKAVRKAAGAEGALGGGGGDGARPAPVMNDTARRFYKGSVPMAVFRAAVKAVPADVGFRAGFLRCCAEDFPVL-SSEAAQSILTSIERDFPESCEAW 1143
            MAD+VQY +++M+ +LEDL+   IF++ EVR IV +R+ FEY ++R   R++D +RY+EYELNL++LR  R +R+                   K +++D   ++ V  IFDRA+MK  GDVD+WL +I F    G SK L +LF  ALQLHPRN  LWI+AASWEF    N  SAR LMQR +R+NP ++ LWL+YFRLEF YV+KL  RRE+LGL A+                     + +++    A V   G     A+ ++A                   ++ +     +G++P  V+R A  A+P D  FR  F+   +  FP    S  A+ IL S   DFP     W
Sbjct:    1 MADAVQYVMEKMIPELEDLQQLQIFTKEEVRQIVQKRRDFEYTMKRTPLRKVDCLRYIEYELNLDALRRQRKKRL----------------GLQKQSSSDHTGMQRVHNIFDRALMKHRGDVDLWLQHIAFCKNTGSSKLLSKLFTNALQLHPRNETLWIEAASWEFSTNLNVDSARVLMQRSIRMNPHSKKLWLEYFRLEFLYVQKLRTRREVLGLDADT-------------------TKPLELSLDIAPVKGEGAAQVDAIAESA---------------KESAVDKSRHEILQGAIPKIVYRNASHAIPNDAAFRLQFVSI-SNLFPATYGSPVAKVILESSLADFPTDAAVW 306          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17376.1 vs. uniprot
Match: W4H669_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H669_9STRA)

HSP 1 Score: 218 bits (554), Expect = 2.610e-57
Identity = 132/357 (36.97%), Postives = 188/357 (52.66%), Query Frame = 1
Query:   76 MADSVQYALDRMVVDLEDLRCRGIFSEAEVRAIVSRRKGFEYMLRRHEARRLDYMRYVEYELNLESLRALRTRRVEGGAXXXXXXXXXXXXXKGKAATADFCCVRLVRWIFDRAVMKFPGDVDIWLHYIDFAARQGQSKALGRLFARALQLHPRNPGLWIKAASWEFFDGGNASSARSLMQRGLRINPGARNLWLQYFRLEFSYVEKLMGRREILGLGAEQGGAGDNGQGNXXXXXXXXGRRGMDIPELEAEVGQSGGPSFKAVRKAAGAEGALGGGGGDGARPAPVMNDTARR-FYKGSVPMAVFRAAVKAVPADVGFRAGFLRCCAEDFPVLSSEAAQSILTSIERDFPESCEAW 1143
            MAD+VQY +++M+ +LEDL+   IF++ EVR IV +R+ FEY ++R   R++D +RY+EYELNL++LR  R +R+                   K + +D   ++ V  IFDRA+MK  GDVD+WL +I F    G SK L +LF  ALQLHPRN  +WI+AA+WEF    N  SAR L+QR +RINP ++ LWL+YFRLEF YV+KL  RRE+LGL  E+                      +DI  ++ E                           D    +    + +R+   +G++P  VFR A++A+P +  FR  F+  C           A+ IL S   DFP     W
Sbjct:    1 MADAVQYVMEKMIPELEDLQHLQIFTKDEVRQIVQKRRDFEYTMKRTPLRKVDCLRYIEYELNLDALRRQRKKRM----------------GLTKLSLSDHSGMQRVHNIFDRALMKHRGDVDLWLQHIAFCKNTGSSKLLSKLFTNALQLHPRNEAIWIEAAAWEFATNLNVDSARVLLQRSIRINPHSQKLWLEYFRLEFLYVQKLRTRREVLGLDTEK---------------TKPKELSLDIAPVDGEDAPI-----------------------DATTDSESSTEKSRQEILQGAIPKIVFRNAIQAIPQNAAFRLAFIAICNLFPATYGHPVAKFILDSTLADFPNDATVW 303          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJQ2_9PHAE0.000e+088.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YXJ8_9STRA2.270e-8741.98U3 small nucleolar RNA-associated protein 6-domain... [more]
A0A6H5K8P6_9PHAE2.450e-8491.62Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A433Q7W8_9FUNG8.670e-6138.57U3 small nucleolar RNA-associated protein 6-domain... [more]
A0A6G0XVP7_9STRA2.330e-6038.00Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A433A2E5_9FUNG3.010e-5937.03U3 small nucleolar RNA-associated protein 6-domain... [more]
A0A485KQ44_9STRA4.620e-5938.76Aste57867_10082 protein n=1 Tax=Aphanomyces stella... [more]
A0A1Y1Y702_9FUNG2.920e-5835.95Uncharacterized protein n=1 Tax=Basidiobolus meris... [more]
A0A024UHP5_9STRA2.010e-5738.10Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4H669_9STRA2.610e-5736.97Uncharacterized protein n=10 Tax=Aphanomyces astac... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig93contigE-siliculosus-1a_M_contig93:532797..538082 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size2520
Model size2520
Exons4
Ec32 orthologEc-15_002810.1
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko03009
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.J
EggNOG OGsCOG5191@1,KOG2396@2759
EggNOG free text desc.snoRNA binding
GOsGO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0034388,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904
KEGG Pathwayko03008,map03008
KEGG koko:K14557
Seed eggNOG ortholog2880.D8LSS2
Seed ortholog evalue0.0
Seed ortholog score1305.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig93.17376.1prot_E-siliculosus-1a_M_contig93.17376.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig93 532797..538082 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936485.519113-CDS-E-siliculosus-1a_M_contig93:532796..5329521622936485.519113-CDS-E-siliculosus-1a_M_contig93:532796..532952Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 532797..532952 +
1696251099.8470566-CDS-E-siliculosus-1a_M_contig93:532796..5329521696251099.8470566-CDS-E-siliculosus-1a_M_contig93:532796..532952Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 532797..532952 +
1622936485.5853932-CDS-E-siliculosus-1a_M_contig93:534287..5346231622936485.5853932-CDS-E-siliculosus-1a_M_contig93:534287..534623Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 534288..534623 +
1696251099.8619106-CDS-E-siliculosus-1a_M_contig93:534287..5346231696251099.8619106-CDS-E-siliculosus-1a_M_contig93:534287..534623Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 534288..534623 +
1622936485.5993996-CDS-E-siliculosus-1a_M_contig93:534962..5367981622936485.5993996-CDS-E-siliculosus-1a_M_contig93:534962..536798Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 534963..536798 +
1696251099.872699-CDS-E-siliculosus-1a_M_contig93:534962..5367981696251099.872699-CDS-E-siliculosus-1a_M_contig93:534962..536798Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 534963..536798 +
1622936485.617415-CDS-E-siliculosus-1a_M_contig93:537890..5380821622936485.617415-CDS-E-siliculosus-1a_M_contig93:537890..538082Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 537891..538082 +
1696251099.88244-CDS-E-siliculosus-1a_M_contig93:537890..5380821696251099.88244-CDS-E-siliculosus-1a_M_contig93:537890..538082Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 537891..538082 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig93.17376.1

>prot_E-siliculosus-1a_M_contig93.17376.1 ID=prot_E-siliculosus-1a_M_contig93.17376.1|Name=mRNA_E-siliculosus-1a_M_contig93.17376.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=840bp
LAVIRTAVQEDYDGCPLGVDSLRGIMADSVQYALDRMVVDLEDLRCRGIF
SEAEVRAIVSRRKGFEYMLRRHEARRLDYMRYVEYELNLESLRALRTRRV
EGGASGGQQRNKKKKTKKGKAATADFCCVRLVRWIFDRAVMKFPGDVDIW
LHYIDFAARQGQSKALGRLFARALQLHPRNPGLWIKAASWEFFDGGNASS
ARSLMQRGLRINPGARNLWLQYFRLEFSYVEKLMGRREILGLGAEQGGAG
DNGQGNDDDDDDDGGRRGMDIPELEAEVGQSGGPSFKAVRKAAGAEGALG
GGGGDGARPAPVMNDTARRFYKGSVPMAVFRAAVKAVPADVGFRAGFLRC
CAEDFPVLSSEAAQSILTSIERDFPESCEAWEVRASYPQLAAEAAAAAGR
DGGRLRSAVVQESVDTFELAVEAVGASQPDMWVRYASFLRGRLEACEGAE
ERKRGGGAVDGGKGGDMVGASATTAAAAAALAARLREVLARSVEIHLAGG
AAPNDPPRRSTTAVTAAIAARKERGGASLLATRGVSPRPAEELEAPSRRR
DEDSREALSAGLADVCLALGEPEEALAALRAATGVLPRRPGPWLRRAALE
RRLAALGGDPGQAGRTASGGEKPDLGSSSSSAGAAGAGVAAATLRAGIKA
VPPAAPGYPDLWRELLASLVASGGGHSKKGKTAVAAAFREAVEACGGGSA
GNNAQGEFLAGYVRWSAAVEGPDAARRALQWARRSFLLTGTGAAAAYGEA
IELERALGEEAGEEGARAKRVRELFEDSVDKFGRELPAIWEEYAQFEIQE
GDVKRANAVRWRSQQQQRTDGGLGGGITSSTGRKKQRWG*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig93:532797..538082+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig93.17376.1 ID=mRNA_E-siliculosus-1a_M_contig93.17376.1|Name=mRNA_E-siliculosus-1a_M_contig93.17376.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5286bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:532797..538082+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTTGCGGTGATCAGGACAGCAGTACAGGAGGACTACGACGGTTGCCCGCT TGGTGTTGACAGCTTGAGGGGCATCATGGCGGACAGCGTGCAGTATGCCC TCGATCGCATGGTCGTAGATCTGGAGGACCTGAGATGTCGAGGGATATTC TCGGAGGTGAGGGAGGAATCGGAGATGAACTCGCCGGCTGCTGTGTGGTG TGACTGGACATGACTCGTTTGCCTCCACAGAGGGAGAGGGCACAGCACCT CTGTGCCGTGGACTCCGTTGCGATTTCTAGGGCAGAGAATGGGGCCGGTG CAACGATTTCAGTGTCCGTGAGTAATGTATAGGACAGGCAAAACCCTTGT TTCGTTTTTAAACCGGACACCGATAACAGCGTCTCTGCTGGAAGACACAA GTGCGGCCACCGAGGAGCTGCCATTGTTGAGGACTGCCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCAGCCCCGCGCTCGC CCGAGATGCCTACAGAGATGTGTCGTTTCTGCCTGCAAAAATCGTGCCTG CTTCCAGTCCGACAGCCGTACTCTGGCCCTCATCCATGCGTCATGCTGGT GAATGTATGTCTACCACTGCTGCTGCAGCATGCCTCTCGTATCGCGCGGG GTTGAATACCCGTTGGCTTGGCGTTGGTGAACATGATCGTACCGTTTTGA ACCCCTCTTGGTTATTAGTTTAGATTGGACGTGCTCGATGGCAACGTCAA TACACGGGCAGCCAGCCCAAAGCGTTGCGGGGTCAGCAGAGCTTCCTCAC AGACAGCAACCCAGACAGCTGCACCTCGAGAAAAGCAGCACGGTACGAAT ACCGCACGGACATGTCCGCGAGGAACGTCGACGCAACGATGTGTGTACAT GTGTGTCGAACTGCACGATGCCGTTTGCGATAGTCGGCGGCAGTTGTAGA CAAGAGTAAGACACGATGAATAAAAACTGTACACTACAATACGGTGGTAC TCCATGATACGTGCGCTCTTGTGTGAACCCTGGGTGTTTGACGTGCTGTT CGAGTCCCTTGGCCCAACCTCGTGGCCCTTTCACCCGTACCGTTCACCTT TATTGGGAGAGGGCGGTGATCCATCTGGAGGCCACCCTCCTGCTTTGGTG CCGACGCTGCACATTGTTGTGGACGGCAGTCGGAGAAGAAAAAGAAAGAA ACATGCGCCTCTCCCAGATAGCACACGGCACGCAACCTATTGTTGCCTGA GGAAAACCTCTGCGCCCCTTACTTCCCCCAGAGCGTGTAGACTGCTGTTG CCGTTGTGTTGCTGCTGTTGAGCACAGAACACGCTACCGAATTCCACACA ACCTTTTTCCCTACACGACCCGAGATCAACGAGCACCCGTTCTCTCCCGG AAACGAAACCTGACGGCATACGAGTGTTTTCAGTCTGGCCACCACACGCG TCCTACCCACCCACCAACCCACCCACCCCCACGCGGCGCAGGCCGAGGTC CGCGCCATCGTCTCGAGGAGGAAGGGCTTCGAGTACATGCTTCGGCGGCA CGAGGCCCGCCGCCTGGACTACATGCGCTACGTCGAGTACGAGCTCAACC TCGAGTCCCTGCGCGCCTTGCGCACGAGACGGGTTGAGGGCGGTGCCAGC GGCGGCCAGCAGCGCAACAAGAAGAAGAAGACCAAGAAGGGGAAGGCCGC CACGGCCGACTTCTGCTGCGTGCGCCTGGTGCGGTGGATCTTCGACCGCG CCGTGATGAAGTTTCCCGGGGACGTGGACATCTGGCTCCACTACATCGAC TTCGCCGCCCGTCAGGGGCAGAGCAAGGTGGGGGGGGGGCGTAGTACCGG CGTTGACTAGCGAGATGAGGGAGGGGCGGAGGAAATGTGCAAAACCTGCT GTCGTCAGGACCAATGAGTAACGTAAGCCTTCGTGATAGTACAGTCAGCA AGAAGGAAATGCACAACAGGCCCTCATCCGCAGCACGCCAAAGGCTCCTC GCTTCCTTGGTCTCTCCGTGAATACGCGGTAAGACATTGAACAATGCCCT TCTTCTACCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC CCTCCCTCCCTCCCCTCAACTCAACGATGATCATCACCCTACATTGCGCA CAATATAACGCCGCAGGCGCTGGGCAGGCTCTTCGCCCGTGCCCTCCAGC TCCACCCCCGCAACCCCGGGCTCTGGATCAAGGCGGCGAGCTGGGAGTTC TTCGACGGTGGCAACGCCTCGTCCGCCCGCTCCCTCATGCAGCGGGGGCT GCGCATCAACCCGGGCGCCCGGAACCTCTGGCTCCAGTACTTCCGCCTCG AGTTCTCGTACGTGGAGAAGCTCATGGGCAGGAGGGAGATCCTCGGCCTG GGAGCGGAACAGGGCGGGGCGGGCGACAACGGGCAGGGGAACGATGATGA TGATGATGATGATGGCGGGCGGCGAGGCATGGACATACCGGAGCTCGAGG CTGAAGTGGGACAGAGCGGGGGTCCCAGCTTCAAGGCCGTGAGGAAAGCG GCGGGAGCGGAAGGAGCGCTGGGGGGCGGCGGCGGCGACGGCGCGCGCCC GGCGCCGGTGATGAACGACACGGCCCGGCGGTTCTACAAGGGGTCCGTCC CGATGGCCGTGTTTCGGGCGGCCGTCAAGGCCGTCCCCGCGGACGTTGGG TTCCGAGCGGGGTTCCTGCGGTGCTGCGCGGAGGACTTCCCGGTGCTATC TTCCGAGGCAGCGCAGTCAATCCTGACCTCCATCGAGAGAGACTTTCCCG AGAGCTGCGAGGCGTGGGAGGTGCGGGCGTCGTACCCGCAGCTCGCGGCG GAGGCGGCGGCGGCGGCCGGTCGCGATGGCGGTCGGTTACGGTCCGCCGT CGTGCAGGAGAGCGTGGACACGTTCGAGCTCGCCGTTGAGGCGGTCGGGG CGTCGCAGCCGGACATGTGGGTACGCTACGCGTCGTTCTTGCGGGGGAGG CTCGAGGCCTGCGAGGGGGCCGAAGAAAGGAAGAGAGGCGGCGGGGCGGT CGACGGGGGCAAAGGCGGTGACATGGTTGGGGCTTCGGCAACGACCGCCG CCGCGGCTGCCGCTCTCGCGGCTCGACTCCGGGAGGTGCTGGCGCGTTCG GTGGAGATCCACCTCGCCGGCGGCGCCGCACCGAACGATCCGCCGCGGCG TTCCACCACCGCCGTTACCGCGGCAATCGCAGCCCGCAAGGAGAGAGGAG GCGCGTCGCTGCTCGCGACGAGGGGGGTCTCGCCCCGCCCAGCCGAGGAG CTCGAGGCGCCTAGTCGGCGCCGGGATGAAGACTCCCGAGAGGCCCTGTC CGCGGGGCTTGCGGACGTGTGCCTGGCGCTGGGCGAGCCTGAGGAGGCTC TGGCGGCGCTCCGCGCCGCGACCGGGGTGCTGCCCCGGCGGCCGGGACCC TGGCTTCGCCGCGCGGCGCTGGAGCGGCGGCTCGCGGCCTTGGGCGGCGA CCCCGGGCAAGCCGGGCGGACGGCCAGCGGTGGAGAGAAGCCCGACCTTG GAAGTAGCAGCAGCAGTGCTGGCGCTGCTGGTGCCGGCGTGGCCGCGGCG ACCCTGCGGGCGGGGATAAAGGCCGTCCCGCCGGCGGCCCCGGGGTACCC GGACCTGTGGCGGGAGCTGCTCGCGTCTCTGGTGGCCTCGGGGGGTGGGC ACAGCAAAAAGGGTAAAACTGCGGTGGCAGCGGCGTTCCGGGAGGCCGTC GAGGCATGCGGGGGAGGCTCCGCAGGGAACAACGCGCAGGGGGAGTTTTT GGCCGGGTACGTCCGCTGGAGCGCGGCCGTGGAGGGTCCCGACGCCGCCC GCCGGGCTCTGCAGTGGGCAAGGCGTTCCTTCTTGCTCACGGGGACCGGG GCGGCGGCGGCGTACGGCGAGGCGATCGAGCTGGAGAGGGCGCTGGGGGA GGAGGCGGGGGAGGAAGGGGCAAGGGCGAAGCGCGTGCGGGAACTATTTG AGGTGATGAGGATGATGATGAATCCGTTGGTGCGCCGCGAAGGTGTTCAA GGATGCCGCAGGTTGCGTAAGATATCACCCCCCGTCCTGGGTCGATATTT AGAGCTCGGTTGCTCTACGACGAAGAGGGTTGCCAAAATCGAATGATACG TTGTTGGAAATGCTCTCGACGAGGACGGTACCAACGCCGCCAATTTCGGC AGAGCCACTTGCCGTGTTGCCACGTGTATTGTGCAACACACGGTAGTTAC TGGTCTGTTCTGGAGGTGTTGTTGAGGAGCGAACAAGTTGACTGGAAAAA CGCTGCAACAGGTTTCTGGGCTGTAACCGCGGGTAACTGTTTAGTTTTTC TGCGATGCCGTCTCTGAATACCGTAATTGTGCGTGTTATCGCAGCCCCGT GTTAGCGTTTTTCTATAGGGTATTTCTCCACAACTAGGAGGGTGCGAACA CTAACTGATACCTCTCCGGAAAGCCCTCGACGAGATGTTTCCAAAACCAC CCTTTTCGGAGGTAATACCTCCCTGGTTGAGGAGAAATACGCTATAGAAA AACGCTAACACGGGGGTGTGATAACACGCACAATTACGGTATTTTGACCC TTTACTTCTCCGTATCCGTCACGGCTTGCCTTCTGCCGGAGGGAGGCCCT ATCCTTCGTCAACTCTTTGCCTTCCCTACATGTCCCCTTTGACACCTACC GCCGTAGCCGGAATCGCATGGGCACTCTAAAGGAACTCGAGGCTTCGCTC TTTTTGCGCTACGACACGTACATACCTAGAACGTTCGCGTGTGTGGTGTT CCTCTGCCTCCTTTGGTAGCGCTTTGTTTTCGCTGTCATTTTTTTGTTGT AGCTTCGGGTCTGTTACGGTCTGTTCGCCCCCACGTGCATCGGTCGGCTC TCTATGTGGTACGGCGGCGAAATATGTGATATGTGCCCACGTGCGCCGTC GTCAGTGTTTCCGTCGCAAGCCGGCAGGTCACACCTCCTCCTATCCATCA TCATCATCGCGCGTGTGGGGTTTTGTCTCGACCCATACATGTCCCTTCGT CACACATGGCATTTTTTTTTTTCCCCGTTCTTTTGTCATGTCAGGATTCG GTGGACAAGTTCGGCCGGGAGTTGCCTGCCATCTGGGAGGAGTACGCGCA GTTCGAGATTCAGGAGGGGGATGTGAAGAGAGCGAACGCTGTGCGTTGGA GATCCCAACAGCAGCAGCGGACGGATGGCGGTCTAGGCGGGGGGATCACG TCTAGCACCGGCAGAAAGAAACAGCGATGGGGTTAG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:532797..538082+

>mRNA_E-siliculosus-1a_M_contig93.17376.1 ID=mRNA_E-siliculosus-1a_M_contig93.17376.1|Name=mRNA_E-siliculosus-1a_M_contig93.17376.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=5040bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:532797..538082+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTTGCGGTGATCAGGACAGCAGTACAGGAGGACTACGACGGTTGCCCGCT
TGGTGTTGACAGCTTGAGGGGCATCATGGCGGACAGCGTGCAGTATGCCC
TCGATCGCATGGTCGTAGATCTGGAGGACCTGAGATGTCGAGGGATATTC
TCGGAGCTTGCGGTGATCAGGACAGCAGTACAGGAGGACTACGACGGTTG
CCCGCTTGGTGTTGACAGCTTGAGGGGCATCATGGCGGACAGCGTGCAGT
ATGCCCTCGATCGCATGGTCGTAGATCTGGAGGACCTGAGATGTCGAGGG
ATATTCTCGGAGGCCGAGGTCCGCGCCATCGTCTCGAGGAGGAAGGGCTT
CGAGTACATGCTTCGGCGGCACGAGGCCCGCCGCCTGGACTACATGCGCT
ACGTCGAGTACGAGCTCAACCTCGAGTCCCTGCGCGCCTTGCGCACGAGA
CGGGTTGAGGGCGGTGCCAGCGGCGGCCAGCAGCGCAACAAGAAGAAGAA
GACCAAGAAGGGGAAGGCCGCCACGGCCGACTTCTGCTGCGTGCGCCTGG
TGCGGTGGATCTTCGACCGCGCCGTGATGAAGTTTCCCGGGGACGTGGAC
ATCTGGCTCCACTACATCGACTTCGCCGCCCGTCAGGGGCAGAGCAAGGC
CGAGGTCCGCGCCATCGTCTCGAGGAGGAAGGGCTTCGAGTACATGCTTC
GGCGGCACGAGGCCCGCCGCCTGGACTACATGCGCTACGTCGAGTACGAG
CTCAACCTCGAGTCCCTGCGCGCCTTGCGCACGAGACGGGTTGAGGGCGG
TGCCAGCGGCGGCCAGCAGCGCAACAAGAAGAAGAAGACCAAGAAGGGGA
AGGCCGCCACGGCCGACTTCTGCTGCGTGCGCCTGGTGCGGTGGATCTTC
GACCGCGCCGTGATGAAGTTTCCCGGGGACGTGGACATCTGGCTCCACTA
CATCGACTTCGCCGCCCGTCAGGGGCAGAGCAAGGCGCTGGGCAGGCTCT
TCGCCCGTGCCCTCCAGCTCCACCCCCGCAACCCCGGGCTCTGGATCAAG
GCGGCGAGCTGGGAGTTCTTCGACGGTGGCAACGCCTCGTCCGCCCGCTC
CCTCATGCAGCGGGGGCTGCGCATCAACCCGGGCGCCCGGAACCTCTGGC
TCCAGTACTTCCGCCTCGAGTTCTCGTACGTGGAGAAGCTCATGGGCAGG
AGGGAGATCCTCGGCCTGGGAGCGGAACAGGGCGGGGCGGGCGACAACGG
GCAGGGGAACGATGATGATGATGATGATGATGGCGGGCGGCGAGGCATGG
ACATACCGGAGCTCGAGGCTGAAGTGGGACAGAGCGGGGGTCCCAGCTTC
AAGGCCGTGAGGAAAGCGGCGGGAGCGGAAGGAGCGCTGGGGGGCGGCGG
CGGCGACGGCGCGCGCCCGGCGCCGGTGATGAACGACACGGCCCGGCGGT
TCTACAAGGGGTCCGTCCCGATGGCCGTGTTTCGGGCGGCCGTCAAGGCC
GTCCCCGCGGACGTTGGGTTCCGAGCGGGGTTCCTGCGGTGCTGCGCGGA
GGACTTCCCGGTGCTATCTTCCGAGGCAGCGCAGTCAATCCTGACCTCCA
TCGAGAGAGACTTTCCCGAGAGCTGCGAGGCGTGGGAGGTGCGGGCGTCG
TACCCGCAGCTCGCGGCGGAGGCGGCGGCGGCGGCCGGTCGCGATGGCGG
TCGGTTACGGTCCGCCGTCGTGCAGGAGAGCGTGGACACGTTCGAGCTCG
CCGTTGAGGCGGTCGGGGCGTCGCAGCCGGACATGTGGGTACGCTACGCG
TCGTTCTTGCGGGGGAGGCTCGAGGCCTGCGAGGGGGCCGAAGAAAGGAA
GAGAGGCGGCGGGGCGGTCGACGGGGGCAAAGGCGGTGACATGGTTGGGG
CTTCGGCAACGACCGCCGCCGCGGCTGCCGCTCTCGCGGCTCGACTCCGG
GAGGTGCTGGCGCGTTCGGTGGAGATCCACCTCGCCGGCGGCGCCGCACC
GAACGATCCGCCGCGGCGTTCCACCACCGCCGTTACCGCGGCAATCGCAG
CCCGCAAGGAGAGAGGAGGCGCGTCGCTGCTCGCGACGAGGGGGGTCTCG
CCCCGCCCAGCCGAGGAGCTCGAGGCGCCTAGTCGGCGCCGGGATGAAGA
CTCCCGAGAGGCCCTGTCCGCGGGGCTTGCGGACGTGTGCCTGGCGCTGG
GCGAGCCTGAGGAGGCTCTGGCGGCGCTCCGCGCCGCGACCGGGGTGCTG
CCCCGGCGGCCGGGACCCTGGCTTCGCCGCGCGGCGCTGGAGCGGCGGCT
CGCGGCCTTGGGCGGCGACCCCGGGCAAGCCGGGCGGACGGCCAGCGGTG
GAGAGAAGCCCGACCTTGGAAGTAGCAGCAGCAGTGCTGGCGCTGCTGGT
GCCGGCGTGGCCGCGGCGACCCTGCGGGCGGGGATAAAGGCCGTCCCGCC
GGCGGCCCCGGGGTACCCGGACCTGTGGCGGGAGCTGCTCGCGTCTCTGG
TGGCCTCGGGGGGTGGGCACAGCAAAAAGGGTAAAACTGCGGTGGCAGCG
GCGTTCCGGGAGGCCGTCGAGGCATGCGGGGGAGGCTCCGCAGGGAACAA
CGCGCAGGGGGAGTTTTTGGCCGGGTACGTCCGCTGGAGCGCGGCCGTGG
AGGGTCCCGACGCCGCCCGCCGGGCTCTGCAGTGGGCAAGGCGTTCCTTC
TTGCTCACGGGGACCGGGGCGGCGGCGGCGTACGGCGAGGCGATCGAGCT
GGAGAGGGCGCTGGGGGAGGAGGCGGGGGAGGAAGGGGCAAGGGCGAAGC
GCGTGCGGGAACTATTTGAGGCGCTGGGCAGGCTCTTCGCCCGTGCCCTC
CAGCTCCACCCCCGCAACCCCGGGCTCTGGATCAAGGCGGCGAGCTGGGA
GTTCTTCGACGGTGGCAACGCCTCGTCCGCCCGCTCCCTCATGCAGCGGG
GGCTGCGCATCAACCCGGGCGCCCGGAACCTCTGGCTCCAGTACTTCCGC
CTCGAGTTCTCGTACGTGGAGAAGCTCATGGGCAGGAGGGAGATCCTCGG
CCTGGGAGCGGAACAGGGCGGGGCGGGCGACAACGGGCAGGGGAACGATG
ATGATGATGATGATGATGGCGGGCGGCGAGGCATGGACATACCGGAGCTC
GAGGCTGAAGTGGGACAGAGCGGGGGTCCCAGCTTCAAGGCCGTGAGGAA
AGCGGCGGGAGCGGAAGGAGCGCTGGGGGGCGGCGGCGGCGACGGCGCGC
GCCCGGCGCCGGTGATGAACGACACGGCCCGGCGGTTCTACAAGGGGTCC
GTCCCGATGGCCGTGTTTCGGGCGGCCGTCAAGGCCGTCCCCGCGGACGT
TGGGTTCCGAGCGGGGTTCCTGCGGTGCTGCGCGGAGGACTTCCCGGTGC
TATCTTCCGAGGCAGCGCAGTCAATCCTGACCTCCATCGAGAGAGACTTT
CCCGAGAGCTGCGAGGCGTGGGAGGTGCGGGCGTCGTACCCGCAGCTCGC
GGCGGAGGCGGCGGCGGCGGCCGGTCGCGATGGCGGTCGGTTACGGTCCG
CCGTCGTGCAGGAGAGCGTGGACACGTTCGAGCTCGCCGTTGAGGCGGTC
GGGGCGTCGCAGCCGGACATGTGGGTACGCTACGCGTCGTTCTTGCGGGG
GAGGCTCGAGGCCTGCGAGGGGGCCGAAGAAAGGAAGAGAGGCGGCGGGG
CGGTCGACGGGGGCAAAGGCGGTGACATGGTTGGGGCTTCGGCAACGACC
GCCGCCGCGGCTGCCGCTCTCGCGGCTCGACTCCGGGAGGTGCTGGCGCG
TTCGGTGGAGATCCACCTCGCCGGCGGCGCCGCACCGAACGATCCGCCGC
GGCGTTCCACCACCGCCGTTACCGCGGCAATCGCAGCCCGCAAGGAGAGA
GGAGGCGCGTCGCTGCTCGCGACGAGGGGGGTCTCGCCCCGCCCAGCCGA
GGAGCTCGAGGCGCCTAGTCGGCGCCGGGATGAAGACTCCCGAGAGGCCC
TGTCCGCGGGGCTTGCGGACGTGTGCCTGGCGCTGGGCGAGCCTGAGGAG
GCTCTGGCGGCGCTCCGCGCCGCGACCGGGGTGCTGCCCCGGCGGCCGGG
ACCCTGGCTTCGCCGCGCGGCGCTGGAGCGGCGGCTCGCGGCCTTGGGCG
GCGACCCCGGGCAAGCCGGGCGGACGGCCAGCGGTGGAGAGAAGCCCGAC
CTTGGAAGTAGCAGCAGCAGTGCTGGCGCTGCTGGTGCCGGCGTGGCCGC
GGCGACCCTGCGGGCGGGGATAAAGGCCGTCCCGCCGGCGGCCCCGGGGT
ACCCGGACCTGTGGCGGGAGCTGCTCGCGTCTCTGGTGGCCTCGGGGGGT
GGGCACAGCAAAAAGGGTAAAACTGCGGTGGCAGCGGCGTTCCGGGAGGC
CGTCGAGGCATGCGGGGGAGGCTCCGCAGGGAACAACGCGCAGGGGGAGT
TTTTGGCCGGGTACGTCCGCTGGAGCGCGGCCGTGGAGGGTCCCGACGCC
GCCCGCCGGGCTCTGCAGTGGGCAAGGCGTTCCTTCTTGCTCACGGGGAC
CGGGGCGGCGGCGGCGTACGGCGAGGCGATCGAGCTGGAGAGGGCGCTGG
GGGAGGAGGCGGGGGAGGAAGGGGCAAGGGCGAAGCGCGTGCGGGAACTA
TTTGAGGATTCGGTGGACAAGTTCGGCCGGGAGTTGCCTGCCATCTGGGA
GGAGTACGCGCAGTTCGAGATTCAGGAGGGGGATGTGAAGAGAGCGAACG
CTGTGCGTTGGAGATCCCAACAGCAGCAGCGGACGGATGGCGGTCTAGGC
GGGGGGATCACGTCTAGCACCGGCAGAAAGAAACAGCGATGGGGTTAGGA
TTCGGTGGACAAGTTCGGCCGGGAGTTGCCTGCCATCTGGGAGGAGTACG
CGCAGTTCGAGATTCAGGAGGGGGATGTGAAGAGAGCGAACGCTGTGCGT
TGGAGATCCCAACAGCAGCAGCGGACGGATGGCGGTCTAGGCGGGGGGAT
CACGTCTAGCACCGGCAGAAAGAAACAGCGATGGGGTTAG
back to top