mRNA_E-siliculosus-1a_M_contig93.17326.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig93.17326.1
Unique NamemRNA_E-siliculosus-1a_M_contig93.17326.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig93.17326.1 vs. uniprot
Match: D7G905_ECTSI (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G905_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 5.800e-154
Identity = 249/276 (90.22%), Postives = 250/276 (90.58%), Query Frame = 3 
Query:   93 MRVGFALHAAFASSAKTSRYGLSAAYSILSAATMAMGETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIEEVTELSETTRGSGGFGSTGVEQGALQTSSTVANAAKKIKVVGSEAVSRXXXXXXXXXXXXXXXXXXXVDDAPTLVAKLRKAAMSRPSSLEDLLVGILEIYDETGDTKALNKNLMAVVTA 920
            MRVGFALHAAFASSAK SR  LSAAYSILS ATM MGETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIEEVTELSETTRGSGGFGSTGVEQGALQ+SSTVAN AKKIKVVGSE VSR                   VDDAPTLVAKLRKAAMSRPSSLEDLLVGILEIYDETGDTKALNKNLMAVVTA
Sbjct:    1 MRVGFALHAAFASSAKISRCALSAAYSILSDATMTMGETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIEEVTELSETTRGSGGFGSTGVEQGALQSSSTVANGAKKIKVVGSEPVSRASATVAKVLRLIDRVDKLDVDDAPTLVAKLRKAAMSRPSSLEDLLVGILEIYDETGDTKALNKNLMAVVTA 276
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BLAST of mRNA_E-siliculosus-1a_M_contig93.17326.1 vs. uniprot
Match: A0A7S2XY21_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY21_9STRA)

HSP 1 Score: 212 bits (539), Expect = 9.090e-61
Identity = 110/140 (78.57%), Postives = 122/140 (87.14%), Query Frame = 3 
Query:  204 ETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIEEVTELSETTRGSGGFGSTGV 623
            E + VKKLSENA +PVRGS  AAGFDL+SA + TVPAG +AL+KTDLSIAIP NTYARIAPRSGLA KK IDVGAGV+DYDYRGPVGVVLFNH SEDF V KGDRVAQLI+ERICMA++ EV +L ET RG+GGFGSTGV
Sbjct:   75 EILSVKKLSENATIPVRGSVDAAGFDLSSAVDTTVPAGGKALIKTDLSIAIPQNTYARIAPRSGLAWKKHIDVGAGVIDYDYRGPVGVVLFNHASEDFAVAKGDRVAQLIIERICMAEVVEVDDLPETARGAGGFGSTGV 214
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BLAST of mRNA_E-siliculosus-1a_M_contig93.17326.1 vs. uniprot
Match: W7TKM8_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKM8_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.150e-59
Identity = 115/151 (76.16%), Postives = 128/151 (84.77%), Query Frame = 3 
Query:  198 MGETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMA---DIEEVTELSETTRGSGGFGSTGVE-QGAL 638
            M ET+QVK+LS++A++PVRGSE AAG+DLASA +  VPA  +ALVKTDLSIAIPPNTYARIAPRSGLA KK IDVGAGVVDYDYRGPVGVVLFNHG+EDF V +GDRVAQLILERI MA   ++EE  EL ET RG GGFGSTGV  QG L
Sbjct:   88 MSETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGVRHQGQL 238
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BLAST of mRNA_E-siliculosus-1a_M_contig93.17326.1 vs. uniprot
Match: A0A835YUJ2_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ2_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.810e-56
Identity = 111/166 (66.87%), Postives = 131/166 (78.92%), Query Frame = 3 
Query:  204 ETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIEEVTELSETTRGSGGFGSTGVEQGALQTSSTVANAA-KKIKVVGSEA 698
            E M VKKLS  A +PVRGSEHAAGFDLA+A+ A VPAG +ALVKTD +IA+P  TYAR+APRSGLA K+MID GAGV+DYDYRG VGVVLFNHG E+F V+ GDR+AQLILERI MA   EV EL ET RG+GGFGSTG  + +LQ++  V+ AA KK+K+    A
Sbjct:   15 EVMLVKKLSPQAHLPVRGSEHAAGFDLAAAHAAVVPAGGKALVKTDCAIAVPAGTYARVAPRSGLAWKRMIDTGAGVIDYDYRGNVGVVLFNHGPEEFVVEPGDRIAQLILERISMAPALEVQELPETERGAGGFGSTGGSR-SLQSALPVSEAAAKKVKLADQGA 179
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BLAST of mRNA_E-siliculosus-1a_M_contig93.17326.1 vs. uniprot
Match: A0A7R9WDQ0_9STRA (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WDQ0_9STRA)

HSP 1 Score: 192 bits (487), Expect = 7.830e-55
Identity = 99/140 (70.71%), Postives = 116/140 (82.86%), Query Frame = 3 
Query:  207 TMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIEEVTELSETTRGSGGFGSTGVE 626
            T++VKKLSENA +P RGS  +AGFDL+SA   T+PAG + + KTDL+IA PP TY R+APRSGLAVKK IDVGAGV+D DYRG VGVVLFN G EDF V+KGDRVAQLILE +CM  +EEV EL+ET RG+GGFGSTGV+
Sbjct:   31 TLRVKKLSENASLPTRGSPLSAGFDLSSAECVTIPAGGRGIAKTDLAIACPPGTYGRVAPRSGLAVKKGIDVGAGVIDADYRGNVGVVLFNFGKEDFVVEKGDRVAQLILEEVCMFPVEEVKELTETERGAGGFGSTGVK 170
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BLAST of mRNA_E-siliculosus-1a_M_contig93.17326.1 vs. uniprot
Match: D8LVR6_BLAHO (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Blastocystis hominis TaxID=12968 RepID=D8LVR6_BLAHO)

HSP 1 Score: 192 bits (487), Expect = 8.890e-55
Identity = 103/153 (67.32%), Postives = 120/153 (78.43%), Query Frame = 3 
Query:  204 ETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARI-----------APRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIEEVTELSETTRGSGGFGSTGVEQ 629
            E + VKKLSENA +PVRGS HAAG+DL SA + TV A  +AL+ TDLS+AIPPN Y R+           APRSGLA+KK IDVGAGVVD DYRGP+G+VLFN G EDF+V+KGDRVAQL+LERICMA I EV  L ET+RGSGGFGSTGV++
Sbjct:    4 EILYVKKLSENATIPVRGSVHAAGYDLFSAADVTVKARGKALIPTDLSVAIPPNCYGRVGMKCSSLFYFVAPRSGLALKKFIDVGAGVVDCDYRGPLGIVLFNFGDEDFEVKKGDRVAQLVLERICMAPIVEVESLDETSRGSGGFGSTGVKK 156
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BLAST of mRNA_E-siliculosus-1a_M_contig93.17326.1 vs. uniprot
Match: A0A388LN42_CHABU (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LN42_CHABU)

HSP 1 Score: 193 bits (491), Expect = 1.020e-54
Identity = 100/144 (69.44%), Postives = 115/144 (79.86%), Query Frame = 3 
Query:  192 MAMGETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIEEVTELSETTRGSGGFGSTGV 623
            +A    ++VKKLSE+AI+P RG+ H+AG+DLASAY+  VPA    LVKTDLSIAIP  TYARIAPRSGLA+KK IDVG GVVDYDYRGPVGV+LFNH  ED  +Q GDRVAQLILERI   D+ EV +L ET RG GGFGSTG+
Sbjct:   97 VASASALRVKKLSEHAILPSRGTTHSAGYDLASAYDCVVPARGTCLVKTDLSIAIPLGTYARIAPRSGLALKKSIDVGGGVVDYDYRGPVGVILFNHSDEDLAIQAGDRVAQLILERIVTPDVVEVEDLDETERGDGGFGSTGL 240
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BLAST of mRNA_E-siliculosus-1a_M_contig93.17326.1 vs. uniprot
Match: UPI000711A950 (deoxyuridine 5 -triphosphate nucleotidohydrolase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711A950)

HSP 1 Score: 190 bits (482), Expect = 1.110e-54
Identity = 98/142 (69.01%), Postives = 117/142 (82.39%), Query Frame = 3 
Query:  204 ETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIEEVTELSETTRGSGGFGSTGVEQ 629
            ET+ +KKLSENA  PVRGS ++AG+DL SA +  +PA ++ALV TDLS+AIP N Y RIAPRSGLA+KK IDVGAGVVD DYRGP+G+VLFN    DF+V+KGDRVAQLILERICMA I EV  L +T RG+GGFGSTGV++
Sbjct:    4 ETLYIKKLSENATTPVRGSPYSAGYDLFSAADIVIPAHQKALVPTDLSVAIPHNCYGRIAPRSGLALKKFIDVGAGVVDCDYRGPLGIVLFNFADTDFEVKKGDRVAQLILERICMAPIVEVDSLDDTERGAGGFGSTGVKR 145
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BLAST of mRNA_E-siliculosus-1a_M_contig93.17326.1 vs. uniprot
Match: A0A7S4GIN2_9EUGL (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GIN2_9EUGL)

HSP 1 Score: 190 bits (483), Expect = 1.240e-54
Identity = 103/162 (63.58%), Postives = 124/162 (76.54%), Query Frame = 3 
Query:  198 MGETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIEEVTELSETTRGSGGFGSTGVEQGALQTSSTVANAAKKIKV 683
            M   +QVKKL+E+AI+P RGS+HAAG+DL+SAY+  VPA  +ALVKTD ++AIP  TYARIAPRSGLA K  ID+GAGVVDYDYRG VGVV+FNH   DF+V++GDRVAQLILERI   ++ EV EL +T RGSGGFGSTG+       S+     AKK KV
Sbjct:    1 MSVLLQVKKLTEHAIIPQRGSKHAAGYDLSSAYDLVVPARGKALVKTDCAMAIPEGTYARIAPRSGLAWKHHIDIGAGVVDYDYRGNVGVVMFNHADSDFEVKRGDRVAQLILERIITPEVSEVQELPDTERGSGGFGSTGIRGAEAINSAEDCPEAKKQKV 162
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BLAST of mRNA_E-siliculosus-1a_M_contig93.17326.1 vs. uniprot
Match: A0A7S0DA79_MICPS (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DA79_MICPS)

HSP 1 Score: 191 bits (486), Expect = 1.420e-54
Identity = 96/142 (67.61%), Postives = 119/142 (83.80%), Query Frame = 3 
Query:  204 ETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIEEVTELSETTRGSGGFGSTGVEQ 629
            +T++VKK+SE+A++PVRGSE AAG+DLA+AYE  +PA  + LVKTDLSIAIP +TYAR+APRSGLA K  IDVGAGVVDYDYRG VGV+LFNH   DF+++ GDRVAQLILERI   ++ EV +L +T RG+GGFGSTGV +
Sbjct:   59 DTLRVKKISEHAVLPVRGSEGAAGYDLAAAYECVIPARGKGLVKTDLSIAIPKDTYARVAPRSGLAWKHFIDVGAGVVDYDYRGNVGVILFNHSDVDFEIKHGDRVAQLILERIATPEVVEVEDLDDTARGAGGFGSTGVSK 200
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G905_ECTSI5.800e-15490.22Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A7S2XY21_9STRA9.090e-6178.57Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
W7TKM8_9STRA2.150e-5976.16Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A835YUJ2_9STRA1.810e-5666.87Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A7R9WDQ0_9STRA7.830e-5570.71Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
D8LVR6_BLAHO8.890e-5567.32Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A388LN42_CHABU1.020e-5469.44Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
UPI000711A9501.110e-5469.01deoxyuridine 5 -triphosphate nucleotidohydrolase n... [more]
A0A7S4GIN2_9EUGL1.240e-5463.58Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A7S0DA79_MICPS1.420e-5467.61Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig93contigE-siliculosus-1a_M_contig93:16878..21936 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size831
Model size1569
Exons5
Ec32 orthologEc-15_002400.1
Ec32 ortholog descriptiondUTPase-like
Hectar predicted targeting categorymitochondrion
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.F
EC3.5.1.122,3.6.1.23
EggNOG OGsCOG0756@1,KOG3370@2759
EggNOG free text desc.dUTP metabolic process
GOsGO:0000166,GO:0000287,GO:0001889,GO:0003674,GO:0003824,GO:0004170,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006259,GO:0006260,GO:0006281,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010469,GO:0010646,GO:0010648,GO:0014070,GO:0015949,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019103,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0023051,GO:0023057,GO:0030545,GO:0030547,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032552,GO:0032556,GO:0033554,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0036094,GO:0042221,GO:0042802,GO:0042975,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043393,GO:0043497,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051259,GO:0051260,GO:0051716,GO:0055086,GO:0061008,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0098772,GO:1901135,GO:1901136,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:2000272
KEGG ModuleM00053
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
KEGG ReactionR02100,R11560,R11896
KEGG koko:K01520,ko:K21286
KEGG rclassRC00002,RC00010
Preferred nameDUT
Seed eggNOG ortholog2880.D7G905
Seed ortholog evalue3.5e-125
Seed ortholog score454.5
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936472.3449523-UTR-E-siliculosus-1a_M_contig93:16877..175231622936472.3449523-UTR-E-siliculosus-1a_M_contig93:16877..17523Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig93 16878..17523 -
1696251094.3135056-UTR-E-siliculosus-1a_M_contig93:16877..175231696251094.3135056-UTR-E-siliculosus-1a_M_contig93:16877..17523Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig93 16878..17523 -
1622936472.4376478-UTR-E-siliculosus-1a_M_contig93:21844..219361622936472.4376478-UTR-E-siliculosus-1a_M_contig93:21844..21936Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig93 21845..21936 -
1696251094.388581-UTR-E-siliculosus-1a_M_contig93:21844..219361696251094.388581-UTR-E-siliculosus-1a_M_contig93:21844..21936Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig93 21845..21936 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936472.3571591-CDS-E-siliculosus-1a_M_contig93:17523..176521622936472.3571591-CDS-E-siliculosus-1a_M_contig93:17523..17652Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 17524..17652 -
1696251094.3324218-CDS-E-siliculosus-1a_M_contig93:17523..176521696251094.3324218-CDS-E-siliculosus-1a_M_contig93:17523..17652Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 17524..17652 -
1622936472.3761022-CDS-E-siliculosus-1a_M_contig93:19592..196881622936472.3761022-CDS-E-siliculosus-1a_M_contig93:19592..19688Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 19593..19688 -
1696251094.349468-CDS-E-siliculosus-1a_M_contig93:19592..196881696251094.349468-CDS-E-siliculosus-1a_M_contig93:19592..19688Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 19593..19688 -
1622936472.3936603-CDS-E-siliculosus-1a_M_contig93:19871..200031622936472.3936603-CDS-E-siliculosus-1a_M_contig93:19871..20003Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 19872..20003 -
1696251094.360944-CDS-E-siliculosus-1a_M_contig93:19871..200031696251094.360944-CDS-E-siliculosus-1a_M_contig93:19871..20003Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 19872..20003 -
1622936472.4093003-CDS-E-siliculosus-1a_M_contig93:20353..206301622936472.4093003-CDS-E-siliculosus-1a_M_contig93:20353..20630Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 20354..20630 -
1696251094.3695626-CDS-E-siliculosus-1a_M_contig93:20353..206301696251094.3695626-CDS-E-siliculosus-1a_M_contig93:20353..20630Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 20354..20630 -
1622936472.4244442-CDS-E-siliculosus-1a_M_contig93:21647..218441622936472.4244442-CDS-E-siliculosus-1a_M_contig93:21647..21844Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 21648..21844 -
1696251094.378852-CDS-E-siliculosus-1a_M_contig93:21647..218441696251094.378852-CDS-E-siliculosus-1a_M_contig93:21647..21844Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig93 21648..21844 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig93.17326.1prot_E-siliculosus-1a_M_contig93.17326.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig93 17524..21844 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig93.17326.1

>prot_E-siliculosus-1a_M_contig93.17326.1 ID=prot_E-siliculosus-1a_M_contig93.17326.1|Name=mRNA_E-siliculosus-1a_M_contig93.17326.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=277bp
MRVGFALHAAFASSAKTSRYGLSAAYSILSAATMAMGETMQVKKLSENAI
MPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRS
GLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILER
ICMADIEEVTELSETTRGSGGFGSTGVEQGALQTSSTVANAAKKIKVVGS
EAVSRTSSTVARVLRLIDRVDKLDVDDAPTLVAKLRKAAMSRPSSLEDLL
VGILEIYDETGDTKALNKNLMAVVTA*
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mRNA from alignment at E-siliculosus-1a_M_contig93:16878..21936-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig93.17326.1 ID=mRNA_E-siliculosus-1a_M_contig93.17326.1|Name=mRNA_E-siliculosus-1a_M_contig93.17326.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5059bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:16878..21936- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GGGTGCTCTGTCCTGGGTCAGTCAGCACAGCAGCACTCTCCCTCCTGCCG
TATCCCTCCCATCCCGTGGCCTTGTTTCTGCTCACCAACTGCATGCGAGT
CGGCTTTGCTCTCCACGCAGCGTTTGCCTCGAGCGCGAAGACTTCACGTT
ACGGTCTGTCCGCCGCTTACAGCATCTTGTCCGCCGCGACCATGGCAATG
GGCGAGACGATGCAAGTCAAGAAGCTCTCGGAGAATGCCATTATGCCCGT
CAGAGGCTCAGAACACGCTGCAGGGTTCGACCTCGCGAGGTGCGTGTGTG
GACTACTGCTGTGGGCACATGGTGATGTAGAAAACTGCTGCGTACGTTTG
AGAAATCGTGGGAAATTTCAAATTTCAAATATGTCTTCAAATCTTGCACC
TTGCTGGCGTTTTTGGCGCGTACAGCCTGCTCACCGGTAGGTTTCGCTGT
GTACATAGTGAACGCGTTGTATCAACGTATCACTACAAGTACCGGTACCG
GGTATCTACAGCCCTGTACCTTTCGATCTTCCCTTGACTGTCGAGGAGCT
TTGATCCGGCCACACGGAAGGACTACAGCCTTCAATTGCATACAAAGTAT
GCCTCCTACGGACGATGAACCAGCACGAGTTGGACTCTGGCAGTGTTACC
CAAGAATGAACGACCGTCCAAAGCGTTCAGTACCTCTAGACCATGGCGGC
AACGCACCGCAGCAACAGAGTGAATACAGCAGTATCTTTTAACGTCCGGA
ACAAAACAGAACAACACACAAACAGCCGTAAGTACAGCAGCAGGTTCTCT
GATCATAATATTCTCCGTCTAAAGAGAACGGTTGCGAAGCGGTGACAGCA
GTAGGGCTGCCGTGTTGTCCGTGTTCTCCCCGCGTGTTGTCGGAGTCCGT
CTCAAGGTGGTCCTAGGTGAACATACATGTCATCTTACAATTATTTTGTG
AAGTCATGCACGAAGTAGTCGTCCATAGCACGAGCCAGCTTGTGTGCCCG
CCTCGTTTACGGCTGTAACTTAAGCATACTGGAACGTGAGATTGCCGTCG
TCCATGATTTGCCTTGAACCGTAACGTGCGCAACGCATGGCGTGTGCTAT
CAAACATCTAAGCTCAAGGGGGAGGGCATGCGAAAAATACCCATCGAAAC
GAGTGCTTCAGTAGTTGGTATCGTTATTTTTGATCTTAGCTAAAAATGAC
TTTTGCAAGGGGCGATCGTCGCGTTCCGTTCCTCGGCGGCGTTTCAATGA
TCCTTGTCCGTCGTCTTCTTCTTCGACTCGGCGGCTGTCTTTCGTTTTTG
CTTCAGTGCCTACGAGGCCACGGTCCCCGCCGGGCGTCAAGCTCTCGTTA
AGACGGACCTCTCCATCGCCATTCCTCCCAACACGTACGCGCGCATCGCC
CCTCGATCCGGCCTGGCCGTGAAGAAGATGATCGACGTCGGGGCGGGAGT
TGTGGACTACGACTACCGCGGGCCTGTTGGAGTGGTGCTCTTCAACCATG
GGAGTGAAGACTTCAAGGTCCAAAAGGGAGATCGTGTGGCTCAGCTCATC
TTGGAGCGCATCTGCATGGCAGACATCGAGGAGGTGATACAAAGTGGTTT
GTTTTCTTGCTTTGGTCATCCCATCTATGTACGTAGCATTGCTTCCTCTC
CAGGGGCCACGATCGAGGTAAACCAAGAAGCGTTCTTCTGTCCTGCGTGC
CTTGGAAGGAGTATTATGGTGCGAAGGATTCACCAATCTGAACCTTCCAT
CCCTCATCGACCTGTGACATCAGTTGAACTTACAACCTGGACCATCCGAA
GGTTTCAGACCGCGAACATGTTTGAAGCGGTTTATTTCTCAATGTTGATG
TACTACAGTCAAATTGAGCTCAACCTTCACGTATGCACGAGGACGAGGTT
TTTGAATTGCATGTTTTCGTGTTTTTTTGCCAGGTCACAGAGCTCTCCGA
AACAACAAGAGGCAGCGGAGGATTTGGCAGTACCGGCGTTGAACAAGGCG
CGCTTCAAACATCATCCACCGTGGCGAACGCGGCAAAGAAAATCAAAGTG
GTGGGGTCCGAGGCGGTGAGAGCAAATTAGTTGGTGCCCCAGGTATCCTT
CATGTGCAGGTACTTGTTGTGTCAGTAGTTGACGTGCGTGCCCGCGATCC
TCACGTATGTGCCGCCTGAGACAGTCAGTAAGTGTAGCTGTGTCGAGTAG
TGTTTTATTTCCTGACATGCATCCTGACCGCATTTGTGGAAATGACAGGT
TTCGAGAACGTCGTCCACAGTAGCGAGAGTGCTCAGGCTAATCGACCGAG
TCGACAAGCTGGATGTGGATGACGCCCCAACGCTTGTCGCAAAGGTGAGC
GCCACGCCGAATGCGTTCCTTGTGTGTTACAATTTGCTCGCAAAATCCAC
AGCCGCGGGCGCGTGTTATAACAACGAGAATGGCAGGCGACTGCCAACTG
GGGAGGGTTACTTCACCCACCTTTTGGGTAACGTACTTTGCACCCTTTTT
TGTCTCAGCTAACCATTGTATGCATAAGAGAATTTTTAGAAAAAATATAT
CCACACACAGAAAGACTACCCATTCGAGATATAACCACAGTCGAACGGGA
TGTGTTGGAGTCTTTTCAGTGAGTGGAGGAAAACCGGCTGGGTACTGGAC
TTATTTTGTGTCGTTTTTAAGCCTATTCGCTGATGACTTATATCAGTGAT
ATCAGCTGGTGTTGAGTACAAAAACATCTGTATCAAGGTAACCTACAGTT
TACAAATAAATCCCCTGTAGTTCAATATTGGGTCAACGACAAATATCTTG
CAGAATCCCTCCGTTATGTCGTGTGTCATAAAATGTAACCTTCACAAGGA
ACACGGCGCGTGTCTTTTGACAAAGTTTCTGGCTTTTTTTTGTTCTTGTG
GATACGATTTTAGGAACAATATTTGTAAAGGCCATGGACTACTCATTTAT
TTTCAATCTACGATTTTGAATTTTTGCGGGCCGCTGTTTCCCGCCGTTTT
TGAATCTGCAAATGCGACATTTGATCCTTTGGGGTTTACGTATGCATATC
AGTGATGTATTGAACAAGATTGGTATACAGAGTGCATGGTAAGGGCATAG
CAGTCAGTTTGTATCATGTTGGCTTGTTTCTTGTTATGTTTAGTGTTGGC
AAACAGGTGTAAAGCACGAAATTTTTTCAAAAGATAGATGGGTTGGTTGG
TTTGTGGACTTCATTGTTGTCCCTCAGAACGATTTGCCGAGATATCTTGT
TGAGACCATTGTAAGAGATAGATGAGTCCGGATGAGTCGGGAGGTAGGGG
CCTCATCTAATCCGCTTTCACACCACAGGAGTACTTTCAACGACTTTCGT
GCCTTCCTTTTACCTAAATCTCGTCAAGCGAATGACGACTTAGGCTCCTT
TTGTGGGCGACGTCGCTGCAGGATCACAAGGTCGACGTAGCTTAGCCAGC
TACCGAGGGCAGGAAGGTATTCTCCATTGACGGTTGGGCAATTGCAGAGG
GGTCCAGAAAGAGATTCGAGCAGGGCGGTGCCACAAGTGGTCCACCCGCT
CTTGCCAGCAAGTGGCATGTGGAAGATCCGTGGATCGATCAAAGTGGCGT
CCTTCCTATGGTTTGGGATGCTTGTAATGATCGTTTTCCTACACTCATAA
CGTATCCGCATGGATTCTGCGCTTCAATATACCTGTCATCAACACGTGTC
ATTGTAGAGTAATTTTATCTGCTGCGCCTCTGTCAGTTGCTCGCGACACC
CTGAAGCTTGCAGCAAGCAGATGTACAAATAGAACTGGCTCGAGGCCGAC
AATCGAGCGACGCCGGCATTTCACAACATGGTTTATTTTCCCTAATTTGC
TTCTTCGCAACCCACGACACTCCGCGCTCAAGGAGATCTTCATGGTGTCT
ACCTAGTGGCAGGTCTTGTGTAGTGTCGAGGTTCGACCTGAGAGTCTTGG
GATCTTGAAAAAAGCAAAAGGGTTAGAGAGACTCTGCGCTGCATCTGTGC
AAGTGCCGTCTGTTTTGGTTCGAAAGGACACATACACCTGTCGGTGAGTC
ACAAGCATCCGCGCCGTGGCTCGTCAGCTCATTGTGCTCGCCGACTCGCC
ATTATCGTATCGTATCGATTGATTGAATCGGTATCCAACACTTTTATGTA
CGTCACACCAAATCCAACACAACCAGTGGTAATGGCGAAAACAGCATCCT
CCTTTTGTCAGCGAACCTCTGTATATTCCTTTGATCATCGAAACCCTCCT
TTTTCCGCTATCTGTCTCGTCCTCTACCTGTCAGTTGCGGAAGGCTGCGA
TGTCCAGGCCATCGTCGCTGGAGGATTTGCTGGTCGGTATTCTGGAGATA
TACGACGAGACCGGAGACACCAAGGCGCTGAATAAAAACTTGATGGCCGT
CGTGACTGCGTAATCTAGTTCGTGAGCTTTGCGTTGCCAACCTGACGCAG
TACGGAACAGCGTGGAATGGAACACTCTAGAGTTGCCTTTGCTCACCTTC
GCTCGTGACCAGACCGAGGAAAAAAGAGGCGGTACTGCCAACTGGTGGAG
CGGGCAGGCCTTCAGTACGCAGAGAGCGTTGAGAACGCTTGTTTTCTCTT
GACCAGAGAGATTACTTGTGCACGATTTAACCTTTTTGCACCCCCAAGAT
GTCTTGTCAGATAAGAAGTGGTCAGAGGCTGGGGAAGAAACAACCGTGAT
GTGCTAAACCTTGGTACCCCGGGAGTCTAGTTGGTATCCTCGCAACCTTC
TAGCAGCCAGGGTGAAGGGTTTGAATCCCGGCGTAATCGAGAGCCTTTCT
TGCAACAAAATGGTTATTCTCTCGCTTGCTTTCCTGGTGGTGGAAAGCGC
TAGTTCGTGTGTACACTTTGAGGGAAGAGAGTGCTGAACTCTTCTCGCGG
TAGAAACCGAAGGCAAGCGCCGCGGGAGGGGTGCAGGGAGGAAACCCTTC
TGCGTGACCACGGATTGGAGCAGCTCCTACACGGCAGAGATGCTGCGGGT
GGTGGGAGCGCGGATGTAAAGTGATGAATGAAATGAATAAAAATTAATGT
TGCGTTCAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:16878..21936-

>mRNA_E-siliculosus-1a_M_contig93.17326.1 ID=mRNA_E-siliculosus-1a_M_contig93.17326.1|Name=mRNA_E-siliculosus-1a_M_contig93.17326.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1662bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:16878..21936- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCGAGTCGGCTTTGCTCTCCACGCAGCGTTTGCCTCGAGCGCGAAGAC
TTCACGTTACGGTCTGTCCGCCGCTTACAGCATCTTGTCCGCCGCGACCA
TGGCAATGGGCGAGACGATGCAAGTCAAGAAGCTCTCGGAGAATGCCATT
ATGCCCGTCAGAGGCTCAGAACACGCTGCAGGGTTCGACCTCGCGAGATG
CGAGTCGGCTTTGCTCTCCACGCAGCGTTTGCCTCGAGCGCGAAGACTTC
ACGTTACGGTCTGTCCGCCGCTTACAGCATCTTGTCCGCCGCGACCATGG
CAATGGGCGAGACGATGCAAGTCAAGAAGCTCTCGGAGAATGCCATTATG
CCCGTCAGAGGCTCAGAACACGCTGCAGGGTTCGACCTCGCGAGTGCCTA
CGAGGCCACGGTCCCCGCCGGGCGTCAAGCTCTCGTTAAGACGGACCTCT
CCATCGCCATTCCTCCCAACACGTACGCGCGCATCGCCCCTCGATCCGGC
CTGGCCGTGAAGAAGATGATCGACGTCGGGGCGGGAGTTGTGGACTACGA
CTACCGCGGGCCTGTTGGAGTGGTGCTCTTCAACCATGGGAGTGAAGACT
TCAAGGTCCAAAAGGGAGATCGTGTGGCTCAGCTCATCTTGGAGCGCATC
TGCATGGCAGACATCGAGGAGTGCCTACGAGGCCACGGTCCCCGCCGGGC
GTCAAGCTCTCGTTAAGACGGACCTCTCCATCGCCATTCCTCCCAACACG
TACGCGCGCATCGCCCCTCGATCCGGCCTGGCCGTGAAGAAGATGATCGA
CGTCGGGGCGGGAGTTGTGGACTACGACTACCGCGGGCCTGTTGGAGTGG
TGCTCTTCAACCATGGGAGTGAAGACTTCAAGGTCCAAAAGGGAGATCGT
GTGGCTCAGCTCATCTTGGAGCGCATCTGCATGGCAGACATCGAGGAGGT
CACAGAGCTCTCCGAAACAACAAGAGGCAGCGGAGGATTTGGCAGTACCG
GCGTTGAACAAGGCGCGCTTCAAACATCATCCACCGTGGCGAACGCGGCA
AAGAAAATCAAAGTGGTGGGGTCCGAGGCGGTCACAGAGCTCTCCGAAAC
AACAAGAGGCAGCGGAGGATTTGGCAGTACCGGCGTTGAACAAGGCGCGC
TTCAAACATCATCCACCGTGGCGAACGCGGCAAAGAAAATCAAAGTGGTG
GGGTCCGAGGCGGTTTCGAGAACGTCGTCCACAGTAGCGAGAGTGCTCAG
GCTAATCGACCGAGTCGACAAGCTGGATGTGGATGACGCCCCAACGCTTG
TCGCAAAGGTTTCGAGAACGTCGTCCACAGTAGCGAGAGTGCTCAGGCTA
ATCGACCGAGTCGACAAGCTGGATGTGGATGACGCCCCAACGCTTGTCGC
AAAGTTGCGGAAGGCTGCGATGTCCAGGCCATCGTCGCTGGAGGATTTGC
TGGTCGGTATTCTGGAGATATACGACGAGACCGGAGACACCAAGGCGCTG
AATAAAAACTTGATGGCCGTCGTGACTGCGTAATTGCGGAAGGCTGCGAT
GTCCAGGCCATCGTCGCTGGAGGATTTGCTGGTCGGTATTCTGGAGATAT
ACGACGAGACCGGAGACACCAAGGCGCTGAATAAAAACTTGATGGCCGTC
GTGACTGCGTAA
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