prot_E-siliculosus-1a_M_contig92.17291.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig92.17291.1
Unique Nameprot_E-siliculosus-1a_M_contig92.17291.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length841
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig92.17291.1 vs. uniprot
Match: A0A6H5JP73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP73_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 5.980e-36
Identity = 170/606 (28.05%), Postives = 255/606 (42.08%), Query Frame = 0
Query:  237 ICRHASLRGQEMGREYDVFLGSAETAPLAWLRNSKSGMDRVIGSVLRGFEGP-SKVFWVLCCAPYIVWRGLGSSSFDHSVAGFIFGIAMLFLVASFGFFN-RSVSRAISPFKGRFDPIIAVFTVVATAS------SGASFVLSVLGDQ---PSVVEFILDAIMSLYVCSLYSLGNN--RGSRPANPEEWCNTCLGHGVEFAEVGIPLKVSRRVPDEMERDYAGTLGGSPWTAAVHDRRPCWQDVPHLTADGWELHGAGMDNDEVFAESGGRDRRKDAWLAAFISASLMDPHGSISDLGAR--RRLSAVLVLLAQNAEQPPGWASACVTLE-----DLSEGRSDMADMHPWYDDVKKRAVVLAHRGVGLALEVADDAIAPHMKFPILARPKEIIKWAVIGCDPHLLLRQPFRQSTCREATTVGFFSLLR-----AIKAPRANNSLSSEILICLAGCAFAVGLKHFE---------HFEWTDLATAI-SVLGLIVLSAAELLGNFVAALAVLLCSRRGVVALMLLFGPPVVGWSRGVLDSVHLSLPFVCAVAGYYMPATVVALAQAIHGSVWYPGVAGRVGGGGALGAG------SGCGAPFQERLLL 801
            + R  SL  QE+G   DV+ G     PLAWLR S    D + GS+L G +    K+  V+  +    W          SV       A  FL+ S   +N ++V+RAISPF    D +I +  ++A+ S      +G      +LG +   P+VV  +L       +C L + G    R  R  + + W + C    V+F EVG+PL+   R      R Y GT+GG+  T  +    P  Q V  L + GW      +  +E FA  GG D   DAWLAAF+   + +   ++ + G     R++A L  LA    +PP WA   VTL      D  E  S   +     D+   R VV++ +     L + D        FP+L RPKE+IK A+ G D  LL  QP RQ+     +    +  LR      I+    +N +   ++  L  C+     + +             W      +   L L+V +A  LL +    LA L+        ++   G  +VG+  G  D V + + FV  VA          + + ++   W PGV   +GGG     G       G   PFQ R+L+
Sbjct:  215 VRRRNSLASQEVGMT-DVYKGDVSYVPLAWLRCSPIASDWIAGSILCGLQSKFGKLLVVVYTSMATAWVWFEGDRRWSSVLM----AASTFLLGSLFLWNYQAVARAISPFGNTRDQLITL--ILASLSFFYSILAGLYHPRGMLGGEVWWPAVVVVLL-------ICLLCAAGRECRRRDRRVDAKSWVSLCRRAAVDFQEVGMPLREVLRGSGADSRGYYGTIGGTQRTVRLQTNTPRGQPVT-LESSGWSQGELSLTGEEAFARCGGTDPTLDAWLAAFVG-EVSENAFTLFNQGPAVVGRINACLAALAATTSKPPSWAEGIVTLSQVYAHDDRELVSAAMERGWTSDEFLLRRVVVSAKPERTILSLPDGFALEENVFPVLVRPKELIKIALRGSDYGLLTEQPNRQAGLAIESRSTLYDRLRLRGMVGIQDSYGSNHVGPLVVAALLACSVGPAWQGYAVQVLPLIGVFAMWRGWRYEVFEALSLVVETARGLLSDQACVLAGLVAGVISWHVIIAASGESLVGFLIG--DVVAVKVTFVVGVA----------MLRMVYSKQWSPGV--ELGGGDDQVEGLCHLALEGRPVPFQYRMLI 790          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17291.1 vs. uniprot
Match: D8LLB9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB9_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 6.860e-32
Identity = 124/411 (30.17%), Postives = 184/411 (44.77%), Query Frame = 0
Query:  237 ICRHASLRGQEMGREYDVFLGSAETAPLAWLRNSKSGMDRVIGSVLRGFEGP-SKVFWVLCCAPYIVWRGLGSSSFDHSVAGFIFGIAMLFLVASFGFFN-RSVSRAISPFKGRFDPIIAVFTVVATAS------SGASFVLSVLGDQ---PSVVEFILDAIMSLYVCSLYSLGNNRGSRPANPEEWCNTCLGHGVEFAEVGIPLKVSRRVPDEMERDYAGTLGGSPWTAAVHDRRPCWQDVPHLTADGWELHGAGMDNDEVFAESGGRDRRKDAWLAAFISASLMDPHGSISDLGAR--RRLSAVLVLLAQNAEQPPGWASACVTLE-----DLSEGRSDMADMHPWYDDVKKRAVVLAHRGVGLALEVADDAIAPHMKFPILARPKEIIKWAVIGCDPHLLLRQPFRQS 629
            + R  S+  QE G   DV+ G     PLAWLR S    D + GS+L G +    ++  V+  +    W        + SV       A  FL+ S   +N ++V+RAISPF    D +I +  ++A+ S      +G      +LG +   P++   +L  ++S      +     R  R  + + W + C    V+F EVG+PL+   R      R Y GT+GG+  T  +    P  Q V  L   GW      +  +E FA  GG D   DAWLAAF+   + +   ++ + G     R++A L  LA    +PP WA   VTL      D  E  S   +     D+   R VV++ +     L + D        FP+L RPKE+IK A+ G D  LL  QP RQ+
Sbjct:  217 VRRRNSMTTQENG-VTDVYKGDVSYVPLAWLRCSPIASDWIAGSILCGLQSKFGRLIVVVYTSMATAWVWFEGDRRESSVVM----AASTFLLGSLFLWNYQAVARAISPFGNTRDQLITL--ILASLSFFYSILAGLYHPRGMLGGEVWWPTIAIVLLVCLLSATARECH-----RRDRRVDAKSWVSLCRRAAVDFQEVGMPLREVLRGSGADSRGYYGTIGGTQRTVRLQTNTPRGQPVT-LENSGWSQGELSLTGEEAFARCGGTDPTLDAWLAAFVG-EVFENAFTLFNQGPAVVGRINACLAALAATTSKPPSWAEGIVTLSQVYAHDDRELISAAMERGWTSDEFLLRRVVVSAKPERTILSLPDGFALEENIFPVLVRPKELIKIALRGSDYGLLTEQPNRQA 613          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17291.1 vs. uniprot
Match: D8LLB8_ECTSI (TSPc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB8_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 1.330e-31
Identity = 169/611 (27.66%), Postives = 252/611 (41.24%), Query Frame = 0
Query:  237 ICRHASLRGQEMGREYDVFLGSAETAPLAWLRNSKSGMDRVIGSVLRGFEGP-SKVFWVLCCAPYIVWRGLGSSSFDHSVAGFIFGIAMLFLVASFGFFN-RSVSRAISPFKGRFDPIIAVFTVVATAS------SGASFVLSVLGDQ---PSVVEFILDAIMSLYVCSLYSLGNN--RGSRPANPEEWCNTCLGHGVEFAEVGIPLKVSRRVPDEMERDYAGTLGGSPWTAAVHDRRPCWQDVPHLTADGWELHGAGMDNDEVFAESGGRDRRKDAWLAAFISASLMDPHGSISDLGAR--RRLSAVLVLLAQNAEQPPGWASACVTLE-----DLSEGRSDMADMHPWYDDVKKRAVVLAHRGVGLALEVADDAIAPHMKFPILARPKEIIKWAVIGCDPHLLLRQPFRQS--TCREATTVGFFSLLRA---IKAPRANNSLSSEILICLAGCAFAVGLKHFE---------HFEWTDLATAI-SVLGLIVLSAAELLGNFVAALAVLLCSRRGVVALMLLFGPPVVGWSRGVLDSVHLSLPFVCAVAGYYMPATVVALAQAIHGSVWYPGVAGRVGGGGALGAG------SGCGAPFQERLLLKVGCT 806
            + R  SL  QE+G   DV+ G     PLAWLR S    D + GS+L G +    K+  V+  +    W          SV       A  FL+ S   +N ++V+RAISPF    D +I +  ++A+ S      +G      +LG +   P+VV      +       L + G    R  R  + + W + C    V+F EVG+PL+   R      R Y GT+GG+  T  +    P  Q V  L + GW      +  +E FA  GG D   DAWLAAF+   + +   ++ + G     R++A L  LA    +PP WA   VTL      D  E  S   +     D+   R VV++ +     L + D        FP+L RPKE+IK A+ G D  LL  QP RQ+       +T+     LR    I+    +N +   ++  L  C+     + +             W      +   L  +V +A  LL +    LA L+        ++   G  +VG   G  D V + + FV  VA          + + ++   W PGV   +GGG     G       G   PFQ R+L+    T
Sbjct:  215 VRRRNSLASQEVGMT-DVYKGDVSYVPLAWLRCSPIASDWIAGSILCGLQSKFGKLLVVVYTSMATAWVWFEGDRRWSSVVM----AASTFLLGSLFLWNYQAVARAISPFGNTRDQLITL--ILASLSFFYSILAGLYHPRGMLGGEVWWPAVVXXXXXFL-------LCAAGRECRRRDRRVDAKSWVSLCRRAAVDFQEVGMPLREVLRGSGADSRGYYGTIGGTQRTVRLQTNTPRGQPVT-LESSGWSQGELSLTGEEAFARCGGTDPTLDAWLAAFVG-EVFENAFTLFNQGPAVVGRINACLAALAATTSKPPSWAEGIVTLSQVYAHDDRELISAAMERGWTSDEFLLRRVVVSAKPERTILSLPDGFALEENIFPVLVRPKELIKIALRGSDYGLLTEQPNRQAGLAIESRSTLYDRLCLRGMVGIQDSYGSNHVGPLVVAALLACSVGPAWQGYAVQVLPLIGVFAMWRGWRYEVFEALSFLVETARGLLSDQACVLAGLVAGVISWNVIVAASGQSLVGVLIG--DVVAVKVTFVVGVA----------MLRMVYSKQWSPGV--ELGGGDDQMEGLCHLALEGRPVPFQYRMLVVPSAT 795          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JP73_9PHAE5.980e-3628.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLB9_ECTSI6.860e-3230.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLB8_ECTSI1.330e-3127.66TSPc domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 354..373
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 687..711
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 764..840
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 738..742
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..314
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 676..686
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 335..353
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 712..717
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 718..737
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 743..763
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 315..334
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 399..654
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 374..378
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 655..675
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 379..398
NoneNo IPR availableTMHMMTMhelixcoord: 690..712
NoneNo IPR availableTMHMMTMhelixcoord: 717..736
NoneNo IPR availableTMHMMTMhelixcoord: 352..374
NoneNo IPR availableTMHMMTMhelixcoord: 379..398
NoneNo IPR availableTMHMMTMhelixcoord: 653..675
NoneNo IPR availableTMHMMTMhelixcoord: 313..335
NoneNo IPR availableTMHMMTMhelixcoord: 740..762

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig92contigE-siliculosus-1a_M_contig92:480733..483255 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig92.17291.1mRNA_E-siliculosus-1a_M_contig92.17291.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig92 479225..485227 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig92.17291.1 ID=prot_E-siliculosus-1a_M_contig92.17291.1|Name=mRNA_E-siliculosus-1a_M_contig92.17291.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=841bp
MAQQGHGVQEEAPGWRQWEWGDDFPHPGTTLDLPDAADLIAKFPQPATCM
PFLGGMWLSYSDDREVLITVPHRSGNVASPITILVGMLDKGMIERVDGRR
PYMCSGGTKYTTFCEDGVYGVPDREIIGPTTRVWGADLLDLPGPVRVVVQ
HGAGPPGGALRKNKTKVWFAATSPYVGGTTYPASWDEISFHQAPVSAAQR
ALRIARTVVVDNENLPQRAGYVDTLRSDFRKGERPGICRHASLRGQEMGR
EYDVFLGSAETAPLAWLRNSKSGMDRVIGSVLRGFEGPSKVFWVLCCAPY
IVWRGLGSSSFDHSVAGFIFGIAMLFLVASFGFFNRSVSRAISPFKGRFD
PIIAVFTVVATASSGASFVLSVLGDQPSVVEFILDAIMSLYVCSLYSLGN
NRGSRPANPEEWCNTCLGHGVEFAEVGIPLKVSRRVPDEMERDYAGTLGG
SPWTAAVHDRRPCWQDVPHLTADGWELHGAGMDNDEVFAESGGRDRRKDA
WLAAFISASLMDPHGSISDLGARRRLSAVLVLLAQNAEQPPGWASACVTL
EDLSEGRSDMADMHPWYDDVKKRAVVLAHRGVGLALEVADDAIAPHMKFP
ILARPKEIIKWAVIGCDPHLLLRQPFRQSTCREATTVGFFSLLRAIKAPR
ANNSLSSEILICLAGCAFAVGLKHFEHFEWTDLATAISVLGLIVLSAAEL
LGNFVAALAVLLCSRRGVVALMLLFGPPVVGWSRGVLDSVHLSLPFVCAV
AGYYMPATVVALAQAIHGSVWYPGVAGRVGGGGALGAGSGCGAPFQERLL
LKVGCTAPWRVVEQNYTAHSIYFDGRSRRAHREYQVVALT*
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