prot_E-siliculosus-1a_M_contig92.17273.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig92.17273.1
Unique Nameprot_E-siliculosus-1a_M_contig92.17273.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length434
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17273.1 vs. uniprot
Match: D7FKY6_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKY6_ECTSI)

HSP 1 Score: 456 bits (1174), Expect = 8.720e-156
Identity = 417/434 (96.08%), Postives = 418/434 (96.31%), Query Frame = 0 
Query:    1 MSEFEAERGNSTEPEHLHGGGMMPAIPQPDAGAAAESVGEIEAQGEAHDGGGAEGKGQAAGDISKEAPTASVETGGHEEEHTTCLTEGHGSCSGADGMEEGGEAHDHH-SHGCSHEGHDHDHEMVESHVGTLELVRPGDVVELVEGMQDLYIMGTVDGFQKVTKMDGLQDMSSLTEMTLQSCLIAXXXXXXXXXXXXXXXXYDNQILSLNIPPSLXXXXXXDMSYNLVKSTAPIAGCPLLDEAFVAQNRVRAIEGFEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLISTFESVDALKPLGSLTCLYLEHNPLYTDFEYRKRLAVVLPTLTQIDATAVAR 433
            MSEFEAERGNSTEPEHL G GMMPAIPQPDAGAA ESVGEIEAQGEAHDGGGAEGKGQAAGDISKEAPTASVETGG EEEHTTCLTEGH SCSGA GM+EGGEAHDHH  HGCS        EMVESHVGTLELVRPGDVVELVEGMQDLYIMGTVDGFQKVTKMDGLQDMSSLTEMTLQSCLIAXXXXXXXXXXXXXXXXYDNQILSLNIPPSLXXXXXXDMSYNLVKSTAPIAGCPLLDEAFVAQNRVRAIEGFEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLISTFESVDALKPLGSLTCLYLEHNPLYTDFEYRKRLAVVLPTLTQIDATAVAR
Sbjct:    1 MSEFEAERGNSTEPEHLQGVGMMPAIPQPDAGAATESVGEIEAQGEAHDGGGAEGKGQAAGDISKEAPTASVETGGQEEEHTTCLTEGHESCSGAAGMKEGGEAHDHHHGHGCSXXXXXXXXEMVESHVGTLELVRPGDVVELVEGMQDLYIMGTVDGFQKVTKMDGLQDMSSLTEMTLQSCLIAXXXXXXXXXXXXXXXXYDNQILSLNIPPSLXXXXXXDMSYNLVKSTAPIAGCPLLDEAFVAQNRVRAIEGFEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLISTFESVDALKPLGSLTCLYLEHNPLYTDFEYRKRLAVVLPTLTQIDATAVAR 434
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17273.1 vs. uniprot
Match: A0A836C9X2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X2_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.530e-21
Identity = 211/302 (69.87%), Postives = 225/302 (74.50%), Query Frame = 0 
Query:  133 LVRPGDVVELVEGMQDLYIMGTVDGFQKVTKMDGLQDMSSLTEMTLQSCLIAXXXXXXXXXXXXXXXXYDNQILSLNIPPSLXXXXXXDMSYNLVKSTAPIAGCPLLDEAFVAQNRVRAIEGFEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLISTFESVDALKP-LGSLTCLYLEHNPLYTDFEYRKRLAVVLPTLTQIDATAVAR 433
            +V PGDVVELV GMQD+YI+GTVDGF KVTK+ GL+      E+TL+SCLI                 YDNQIL+L            DMSYNL+KSTA  A CPLL+                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     E V  L   L SL CLYLEHNP+Y DFEYRKR+A +LP LTQ+DAT V R
Sbjct:   50 IVTPGDVVELVPGMQDIYIVGTVDGFGKVTKITGLEP-----ELTLRSCLIEKMENLETLTELERLELYDNQILTLADLTPFKKLRILDMSYNLIKSTAAAAACPLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVAKLGAVLPSLDCLYLEHNPIYRDFEYRKRIAQLLPKLTQLDATPVRR 346
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17273.1 vs. uniprot
Match: A0A7S0SU36_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SU36_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.900e-13
Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 0 
Query:  162 TKMDGLQDMSSLTEMTLQSCLIAXXXXXXXXXXXXXXXXYDNQILSLNIPPSLXXXXXXDMSYNLVKSTAPIAGCPLLDEAFVAQNRVRAIEG 254
            TK+ GL  M +L E+ L+SCLI+                YDN I  L IPPSL      D+S+N ++  +P+A CPLL+E ++AQN++R IEG
Sbjct:    1 TKIAGLDKMINLRELILRSCLISEMEGLDNNNALVKLELYDNMIEELVIPPSLSGLIILDISFNAIRDMSPVALCPLLEELYIAQNKLRTIEG 93
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17273.1 vs. uniprot
Match: A0A7S2FRA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FRA9_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 3.580e-13
Identity = 52/128 (40.62%), Postives = 76/128 (59.38%), Query Frame = 0 
Query:  131 LELVRPGDVVELVEGMQDLYIMGTVDGFQKVTKMDGLQ-DMSSLTEMTLQSCLIAXXXXXXXXXXXXXXXXYDNQILSLNIPPSLXXXXXXDMSYNLVKSTAPIAGCPLLDEAFVAQNRVRAIEGFEG 257
            L++V P D+ ++ EG +D+Y++GT    +KVT + GL    ++L E+ L+S LI                 YDNQI         XXXXXX  SYNL++S AP+A CPLL+E ++AQN++  IEG +G
Sbjct:   71 LKIVLPRDIEDMEEGAEDVYVVGT--NGRKVTVIAGLDLAAATLEEVVLRSHLITRMDGLTSLTKLTKLELYDNQIEMXXXXXXXXXXXXXXXSYNLIRSMAPVAHCPLLEELYLAQNKLSLIEGLDG 196
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17273.1 vs. uniprot
Match: A0A7S1D0C9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0C9_CYCTE)

HSP 1 Score: 62.8 bits (151), Expect = 3.060e-7
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 0 
Query:  381 ISTFESVDALKPLGSLTCLYLEHNPLYTDFEYRKRLAVVLPTLTQIDATAV 431
            I +FE+V+ L  L SL  LYLE+NP+ +DFEYRKRL  ++P+L QIDAT +
Sbjct:  210 IESFEAVEPLSSLTSLDALYLEYNPVASDFEYRKRLKELVPSLNQIDATMI 260
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17273.1 vs. uniprot
Match: B8C8T8_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8T8_THAPS)

HSP 1 Score: 59.3 bits (142), Expect = 6.270e-7
Identity = 27/51 (52.94%), Postives = 38/51 (74.51%), Query Frame = 0 
Query:  381 ISTFESVDALKPLGSLTCLYLEHNPLYTDFEYRKRLAVVLPTLTQIDATAV 431
            I TFE V+ L  L  L  +YLE+NP+ ++FEYRK+LA ++P+LTQIDA  +
Sbjct:  107 IKTFEEVEPLTALTELDGVYLEYNPVASEFEYRKKLAEMIPSLTQIDANMI 157
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17273.1 vs. uniprot
Match: A0A2D4BWZ0_PYTIN (Protein phosphatase 1 regulatory subunit, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWZ0_PYTIN)

HSP 1 Score: 62.0 bits (149), Expect = 7.390e-7
Identity = 30/53 (56.60%), Postives = 34/53 (64.15%), Query Frame = 0 
Query:  381 ISTFESVDALKPLGSLTCLYLEHNPLYTDFEYRKRLAVVLPTLTQIDATAVAR 433
            +  F  VD L PL SL  LYLE NPL +DFEYRK+L  +LP L QIDA    R
Sbjct:  304 VEQFSDVDRLVPLESLRTLYLERNPLASDFEYRKKLEALLPNLEQIDAVPTTR 356
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17273.1 vs. uniprot
Match: A0A7S2Y3F6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3F6_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 9.000e-7
Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = 0 
Query:  390 LKPLGSLTCLYLEHNPLYTDFEYRKRLAVVLPTLTQIDATAVAR 433
            L  L  L+CLYLEH PL  DFEYRK+LA + PTL QIDAT V R
Sbjct:  132 LHQLPQLSCLYLEHCPLQQDFEYRKKLASMFPTLEQIDATDVIR 175
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17273.1 vs. uniprot
Match: A0A482RXF1_9ARCH (Leucine-rich repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXF1_9ARCH)

HSP 1 Score: 60.5 bits (145), Expect = 1.250e-6
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0 
Query:  382 STFESVDALKP---LGSLTCLYLEHNPLYTDFEYRKRLAVVLPTLTQIDATAVAR 433
            S   S DAL P   L  LTCLYLEH+P+  DFEYR +LA ++P+L Q+DAT V R
Sbjct:  209 SALSSFDALTPFTKLPRLTCLYLEHSPIAKDFEYRMQLAKMIPSLEQLDATNVHR 263
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17273.1 vs. uniprot
Match: A0A7S3Q0W2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0W2_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 3.790e-6
Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 0 
Query:  381 ISTFESVDALKPLGS-----LTCLYLEHNPLYTDFEYRKRLAVVLPTLTQIDATAV 431
            IS+F+ ++ L  LG+     LT +Y+EHNP+Y DFEYRK+L  ++P+L QIDA  +
Sbjct:  319 ISSFDELEPLSSLGTRDGACLTEIYMEHNPIYNDFEYRKKLKEMIPSLVQIDANVI 374
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FKY6_ECTSI8.720e-15696.08Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A836C9X2_9STRA2.530e-2169.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0SU36_9STRA1.900e-1341.94Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S2FRA9_9STRA3.580e-1340.63Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S1D0C9_CYCTE3.060e-756.86Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B8C8T8_THAPS6.270e-752.94Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A2D4BWZ0_PYTIN7.390e-756.60Protein phosphatase 1 regulatory subunit, putative... [more]
A0A7S2Y3F6_9STRA9.000e-765.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482RXF1_9ARCH1.250e-656.36Leucine-rich repeat domain-containing protein n=1 ... [more]
A0A7S3Q0W2_9STRA3.790e-648.21Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 258..280
e-value: 6.0
score: 15.1
coord: 192..217
e-value: 47.0
score: 7.8
coord: 302..323
e-value: 36.0
score: 8.7
coord: 368..392
e-value: 63.0
score: 6.7
coord: 324..346
e-value: 42.0
score: 8.2
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 302..323
e-value: 0.0029
score: 26.8
coord: 258..279
e-value: 0.02
score: 24.1
coord: 214..235
e-value: 80.0
score: 8.2
coord: 280..301
e-value: 0.24
score: 20.5
coord: 324..345
e-value: 22.0
score: 12.8
coord: 170..191
e-value: 360.0
score: 2.8
coord: 346..367
e-value: 12.0
score: 14.8
coord: 192..212
e-value: 310.0
score: 3.4
coord: 368..389
e-value: 1.3
score: 18.0
NoneNo IPR availablePANTHERPTHR15454NISCHARIN RELATEDcoord: 313..427
coord: 158..235
coord: 246..315
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 162..427
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 141..297
e-value: 5.1E-28
score: 99.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 298..433
e-value: 1.5E-33
score: 117.3
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 283..337
e-value: 1.4E-7
score: 31.2
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 172..193
score: 5.756
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 348..369
score: 9.321
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 282..303
score: 7.966
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 194..215
score: 6.618
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 395..417
score: 5.348
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 260..281
score: 7.943
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 304..325
score: 7.812
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 216..237
score: 6.295
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 370..391
score: 7.435
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 326..347
score: 7.489

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig92contigE-siliculosus-1a_M_contig92:258088..268841 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig92.17273.1mRNA_E-siliculosus-1a_M_contig92.17273.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig92 256758..268841 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig92.17273.1 ID=prot_E-siliculosus-1a_M_contig92.17273.1|Name=mRNA_E-siliculosus-1a_M_contig92.17273.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=434bp
MSEFEAERGNSTEPEHLHGGGMMPAIPQPDAGAAAESVGEIEAQGEAHDG
GGAEGKGQAAGDISKEAPTASVETGGHEEEHTTCLTEGHGSCSGADGMEE
GGEAHDHHSHGCSHEGHDHDHEMVESHVGTLELVRPGDVVELVEGMQDLY
IMGTVDGFQKVTKMDGLQDMSSLTEMTLQSCLIAKMEGLEGLTSLTRLTL
YDNQILSLNIPPSLSGLTYLDMSYNLVKSTAPIAGCPLLDEAFVAQNRVR
AIEGFEGLTRLRKLDLGANRIRAITGLEACTLLEELWLGKNKITQIGGIS
TLVRLKRLDVQSNRLTAIEGLEGLAELRELYLSHNVIENAHGLESQVNLD
TLDLSRNKIDSFDGLQHLGQLTDLWMSGNLISTFESVDALKPLGSLTCLY
LEHNPLYTDFEYRKRLAVVLPTLTQIDATAVAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR003591Leu-rich_rpt_typical-subtyp