mRNA_E-siliculosus-1a_M_contig91.17199.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig91.17199.1 vs. uniprot
Match: D7FNV0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNV0_ECTSI) HSP 1 Score: 575 bits (1482), Expect = 1.040e-193 Identity = 407/446 (91.26%), Postives = 409/446 (91.70%), Query Frame = 2
Query: 113 MMATRPQSSGEGXXXXXXXXAQEEKSVPGVSKDALREERKPLLDLDDVAQLENELAACFDAPPPPPLNIRREEPVATVSTWMPMAEHRYVETHVAPPTASDVAAARARGELPQLLQEGQEQEGGQQQQERQAQATRVSDFSSLYSAAPHREESTGQLYPVLAPSAPSSDTMRIPMPPPAVXXXXXXXXRAPSAAFGAAVRDDGAAAXXXXXXXXXXXXXXXXXXXXXLATITATAARERSQDVSSSGEVVEELLSENERLRAVIQEMSDELERVSVQARGGSTAAAGTTQGRQSSAARA----TRSATPTERLLGRYPGAQAEAARXXXXXXXXXXXGQRQDGGARPQVQXXXXXXXXXAVGAGTFVHLKCENCPQWLKVPVHAQLVYCPTCGHTSQMTSASTIHXXXXXXXXXXXXXXXXXXXXXXXXXEEEVGWLGYFKSIIAS 1438
MMATRPQSSGEG XXXXXXXAQEEKSVPGVSKDALREERKPLLDLDDVAQLENELAACFDAPPPPPLNIRREEPVATVSTWMPMAEHRYVETHVAPPTASDVAAARARGELPQLLQEGQEQEGGQ QE+QAQATRVSDFSSLYSAAPHREESTGQLYPVLAPSAP SDTMRIPMPPPAVXXXXXXXXRAPSAAFGAAVRDDGAAAXXXXXXXXXXXXXXXXXXXXX A RERSQDVSSSGEVVEELLSENERLRA+IQEMSDELER SV A GGSTAAAG TQGRQSSAARA SATPTERLLGRYPGAQAEAAR XXXXXXXXXG RQDGGARPQ Q AVGAGTFVH KCENCPQWLKVPVHAQLVYCPTCGHTSQMTSASTIHXXXXXXXXXXXXXXXXXXXXXXXX EEEVGWLGYFKSIIAS
Sbjct: 1 MMATRPQSSGEGGXXXXXXXAQEEKSVPGVSKDALREERKPLLDLDDVAQLENELAACFDAPPPPPLNIRREEPVATVSTWMPMAEHRYVETHVAPPTASDVAAARARGELPQLLQEGQEQEGGQ-LQEQQAQATRVSDFSSLYSAAPHREESTGQLYPVLAPSAPFSDTMRIPMPPPAVXXXXXXXXRAPSAAFGAAVRDDGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXA---RERSQDVSSSGEVVEELLSENERLRAIIQEMSDELERGSVPAIGGSTAAAGATQGRQSSAARAXXXAATSATPTERLLGRYPGAQAEAARRRXXXXXXXXXGHRQDGGARPQTQVQPQVQA--AVGAGTFVHFKCENCPQWLKVPVHAQLVYCPTCGHTSQMTSASTIHXXXXXXXXXXXXXXXXXXXXXXXXGEEEVGWLGYFKSIIAS 440 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig91.17199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig91.17199.1 >prot_E-siliculosus-1a_M_contig91.17199.1 ID=prot_E-siliculosus-1a_M_contig91.17199.1|Name=mRNA_E-siliculosus-1a_M_contig91.17199.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=443bp MMATRPQSSGEGGAAAAAAVAQEEKSVPGVSKDALREERKPLLDLDDVAQback to top mRNA from alignment at E-siliculosus-1a_M_contig91:168491..176725+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig91.17199.1 ID=mRNA_E-siliculosus-1a_M_contig91.17199.1|Name=mRNA_E-siliculosus-1a_M_contig91.17199.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8235bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:168491..176725+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig91:168491..176725+ >mRNA_E-siliculosus-1a_M_contig91.17199.1 ID=mRNA_E-siliculosus-1a_M_contig91.17199.1|Name=mRNA_E-siliculosus-1a_M_contig91.17199.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2658bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:168491..176725+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |