prot_E-siliculosus-1a_M_contig9.17100.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17100.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17100.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length901
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17100.1 vs. uniprot
Match: D7G4M3_ECTSI (Beta strand repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M3_ECTSI)

HSP 1 Score: 1196 bits (3094), Expect = 0.000e+0
Identity = 724/855 (84.68%), Postives = 741/855 (86.67%), Query Frame = 0
Query:   72 MSGTVGGQAAASSSAAAGHASADNGAQETPVVSQVKPDTKA-------------------------ATTSSEGIRTKKGQGVSCVERQPTPRPGHGSSRAAGKWKGTPAWRTSPEQGKSATTPRNTAVLSGTGAFFVTPEQTSPCELRCKCSRVHSNGRSSPPSARSPELAETATTPTGTAASTXXXXXXXXXXXXXXXXXXXXXXXXAATNGVDNPAPRKPSEPAKAATTPRGTAASTGARFSSMAKQLSTTTGHRSNNDDRMAAICRSNPSSTTSPQPAKAVTTPRGTASLTATRVPSSVRQPKTPIPTNHRTAGRAVKIGQGDPTSTTSPHPAKTVTTPRNTAVSTGNRVFFGCRQPTTPTSLRAARAANNAKVSPASTPSPHPTET-VTTPRGTGTSASSRVPSSAQQPTTPTACRRNNNSRAXXXXXXXXXXXXSPHPAKAATTPRNRAVSTGNRVFFGTRQPTTPTTLHAGRTAKNAVVSPASTPSPHPTKTAVTTPQGTVASTSTRVPSSARQPTTPTGRRGSHKDRAVTIGRGNPASTTSPNPAKEATTPRDRAVSTGSRVFFGPRQPTTXXXXXXXXXXXXXXISSASTTSPQPAEAAVTTPRGMATSASTRVPSSARQPTTPTGRRGNNNDRAATDRESQALRSSSEPTGAARTPRSIPGATRDRISLVARQAAEGLRRRSMSARASTNRGGKLASGRSSEQADATRPSVTNSLLADASSSVVASNSAQGLGSTSSGGTIEGRHPTAQISVGAPEDSGSGMEPSPIVFATGEDSLLEAPSASEPSEMEPAEPAEAVQAGGQTRDRPVQRPRSEFAPRPTCSMAEYMMPQIQLLNALQRTVLLNPF 900
            MSGTVGG AAASSSAAAGHASADNGAQETPVVSQVKPDTKA                         ATTSSEGIRTKK QGVS VERQPTPRPGHGSS AAGKWKGTPAWRTSPEQGKS TTPRNTAVLSGTGAFFVTPEQTSPCELRCKCSRVHSNGR SPPSARSPEL ETATTP GTAAST XXXXXXXXXXXXXXXXXXXX   AATNGVDNPA RKPSEPAKAATTPRGTAASTGARFS MAKQLSTTTGHRSNNDDRMAAICRSNPSSTTSP PAK VTTPRGT SLTAT V SSVRQPKTPIPTNHRTA RAVKIGQG+P STTSPHPAKTVTTPRNTAVSTGNRVFFG RQPTTPTSLRAARAA NAKVSPASTPSPHPT+T VTTPRGT TSAS+RVPSSA+QPTTPTA R NNN RA        XXXX           RNRAVSTGNRVFFGTRQPTTPTTLHA RTAKNA++SPASTPSPHPTKTAVTTP+GT  S STRVPSSARQ TTPTGRRG+ KDRAVTIGRGNPASTTSP+PAK ATTPRDRAVSTG+RVFFGPRQPTT              ISSAST SPQPAEAAV TPRGMATSASTR PSSARQ TT TGRRGNNNDRAATDRESQA RSSSEPTGAA+TPRS+PGATRDRISLVARQAAEG+RRRSMSARAST+RGGKLASGRS EQADAT PS   SLLAD SSSVVASNSAQGLGSTSSGGTI+GRHP AQ+S GAPEDSGSGMEPSPIV ATGE S+LE PSASEPSEMEPA   EA QAGGQTRDRPVQRPRSEFAPRPTCSMAEYMMPQIQLLNALQRTVLLNPF
Sbjct:    1 MSGTVGGHAAASSSAAAGHASADNGAQETPVVSQVKPDTKATTPRAIEAKDGGDKPATRQSPDPAAATTSSEGIRTKKKQGVSGVERQPTPRPGHGSSTAAGKWKGTPAWRTSPEQGKSVTTPRNTAVLSGTGAFFVTPEQTSPCELRCKCSRVHSNGRGSPPSARSPELVETATTPAGTAASTAXXXXXXXXXXXXXXXXXXXXNARAATNGVDNPASRKPSEPAKAATTPRGTAASTGARFSFMAKQLSTTTGHRSNNDDRMAAICRSNPSSTTSPHPAKTVTTPRGTGSLTATGVSSSVRQPKTPIPTNHRTADRAVKIGQGNPASTTSPHPAKTVTTPRNTAVSTGNRVFFGSRQPTTPTSLRAARAAKNAKVSPASTPSPHPTKTAVTTPRGTATSASTRVPSSAKQPTTPTARRGNNNGRAVTAGRGNPXXXXXXXXXXXXXXXRNRAVSTGNRVFFGTRQPTTPTTLHASRTAKNAMISPASTPSPHPTKTAVTTPRGTATSASTRVPSSARQQTTPTGRRGNQKDRAVTIGRGNPASTTSPHPAKVATTPRDRAVSTGNRVFFGPRQPTTPTSLRAARTANNAKISSASTPSPQPAEAAVMTPRGMATSASTRAPSSARQQTTLTGRRGNNNDRAATDRESQASRSSSEPTGAAKTPRSMPGATRDRISLVARQAAEGIRRRSMSARASTDRGGKLASGRSPEQADATTPSGITSLLADTSSSVVASNSAQGLGSTSSGGTIQGRHPRAQVSAGAPEDSGSGMEPSPIVPATGEYSMLEPPSASEPSEMEPAXXXEAAQAGGQTRDRPVQRPRSEFAPRPTCSMAEYMMPQIQLLNALQRTVLLNPF 855          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17100.1 vs. uniprot
Match: A0A6H5JF45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF45_9PHAE)

HSP 1 Score: 706 bits (1823), Expect = 3.100e-243
Identity = 492/849 (57.95%), Postives = 515/849 (60.66%), Query Frame = 0
Query:   88 AGHASADNGAQETP-----VVSQVKPDTK--------------------------AATTSSEGIRTKKGQGVSCVERQPTPRPGHGSSRAAGKWKGTPAWRTSPEQGKSATTPRNTAVLSGTGAFFVTPEQTSPCELRCKCSRVHSNGRSSPPSARSPELAETATTPTGTAASTXXXXXXXXXXXXXXXXXXXXXXXXAATNGVDNPAPRKPSEPAKAATTPRGTAASTGARFSSMAKQLSTTTGHRSNNDDRMAAICRSNPSSTTSPQPAKAVTTPRGTASLTATRVPSSVRQPKTPIPTNHRTAGRAVKIGQGDPTSTTSPHPAKTVTTPRNTAVSTGNRVFFGCRQPTTPTSLRAARAANNAKVSPASTPSPHPTETVTTPRGTGTSASSRVPSSAQQPTTPTACRRNNNSRAXXXXXXXXXXXXSPHPAKAATTPRNRAVSTGNRVFFGTRQPTTPTTLHAGRTAKNAVVSPASTPSPHPTKTAVTTPQGTVASTSTRVPSSARQPTTPTGRRGSHKDRAVTIGRGNPASTTSPNPAKEATTPRDRAVSTGSRVFFGPRQPTTXXXXXXXXXXXXXXISSASTTSPQPAEAAVTTPRGMATSASTR-----VPSSARQPTTPTGRRGNNNDRAATDRESQALRSSSEPTGAARTPRSIPGATRDRISLVARQAAEGLRRRSMSARASTNRGGKLASGRSSEQADATRPSVTNSLLADASSSVVASNSAQGLGSTSSGGTIEGRHPTAQISVGAPEDSGSGMEPSPIVFATGEDSLLEAPSASEPSEMEPAEPAEAVQAGGQTRDRPVQRPRSEFAPRPTCSMAEYMMPQIQLLNALQRTVLLNPF 900
            AGHASADNGAQETP     VVSQVKPDTK                          AATTSSEG+RTKKGQ VS VERQPTPRPGHGSSRAAGKWKGTP WRTSPEQGKSAT PRNTA+LSG GAFFVTPEQTSPC+LR KCSRVHSN RSSPPSARSP LAETATTPTGTA+ST         XXXXXXXXXXXXXXX               +                       KQLSTTTGHR+NNDDR+AAI RSNPSST SP P K VTTPRGTASLTATRVPSS RQ KTPIPTNHR A RAVKIGQG+P STTSPHPAKT                                                                                                           ATTP+N AVSTGNRV FGTRQPTTP TLHAGRTAK+A +SPASTPSPHPTKTAVTTP+GT ASTSTRVPSSARQPTTPTGRRG+HKDRAVTI RGNPASTTSP+ AK ATTPRDRA+ TG+R FFGPRQPTT              I SAST SPQPAEAAVTTPRGMATSAST      V SSARQPTTPTGRR                         A+     P ATRDRISLVARQAAE +RRRSMSARA  NRGGKLASGRS                                    SGGTIEGRH TA++S GAP D GSG+EPSPIV A GE SLLEA                    GGQTRD PVQRPRS+FAPRPTCSMAEYMMPQIQLLNALQRTVLL+PF
Sbjct:    4 AGHASADNGAQETPAQQTPVVSQVKPDTKETAPVRAIEGKGGGDKPATRQSRDPAAATTSSEGVRTKKGQDVSGVERQPTPRPGHGSSRAAGKWKGTPVWRTSPEQGKSATNPRNTALLSGMGAFFVTPEQTSPCKLRYKCSRVHSNRRSSPPSARSPGLAETATTPTGTASSTAARVPASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-----------------------KQLSTTTGHRNNNDDRLAAIGRSNPSSTASPHPVKTVTTPRGTASLTATRVPSSARQIKTPIPTNHRIADRAVKIGQGNPASTTSPHPAKT-----------------------------------------------------------------------------------------------------------ATTPKNTAVSTGNRVLFGTRQPTTPATLHAGRTAKDATISPASTPSPHPTKTAVTTPRGTAASTSTRVPSSARQPTTPTGRRGNHKDRAVTIRRGNPASTTSPHLAKVATTPRDRAILTGNRDFFGPRQPTTPTSLRVVRAVKNAKIGSASTPSPQPAEAAVTTPRGMATSASTASASTLVLSSARQPTTPTGRR-------------------------AKXXXXTPSATRDRISLVARQAAEEIRRRSMSARAFMNRGGKLASGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGTIEGRHATAELSAGAPADPGSGVEPSPIVPAMGEKSLLEA--------------------GGQTRDHPVQRPRSDFAPRPTCSMAEYMMPQIQLLNALQRTVLLSPF 677          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4M3_ECTSI0.000e+084.68Beta strand repeat-containing protein n=1 Tax=Ecto... [more]
A0A6H5JF45_9PHAE3.100e-24357.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:2099020..2101722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17100.1mRNA_E-siliculosus-1a_M_contig9.17100.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 2091127..2104105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17100.1 ID=prot_E-siliculosus-1a_M_contig9.17100.1|Name=mRNA_E-siliculosus-1a_M_contig9.17100.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=901bp
MKTVASWLDSESQAELGLLAERNGVVVDGCATKHSAIQALLGSGKALQPV
ADGPPSAPHSGAECGTQGPTSMSGTVGGQAAASSSAAAGHASADNGAQET
PVVSQVKPDTKAATTSSEGIRTKKGQGVSCVERQPTPRPGHGSSRAAGKW
KGTPAWRTSPEQGKSATTPRNTAVLSGTGAFFVTPEQTSPCELRCKCSRV
HSNGRSSPPSARSPELAETATTPTGTAASTAARVPASARQPTTSTGLRDS
SNARAATNGVDNPAPRKPSEPAKAATTPRGTAASTGARFSSMAKQLSTTT
GHRSNNDDRMAAICRSNPSSTTSPQPAKAVTTPRGTASLTATRVPSSVRQ
PKTPIPTNHRTAGRAVKIGQGDPTSTTSPHPAKTVTTPRNTAVSTGNRVF
FGCRQPTTPTSLRAARAANNAKVSPASTPSPHPTETVTTPRGTGTSASSR
VPSSAQQPTTPTACRRNNNSRAVTTRRGNPTSTTSPHPAKAATTPRNRAV
STGNRVFFGTRQPTTPTTLHAGRTAKNAVVSPASTPSPHPTKTAVTTPQG
TVASTSTRVPSSARQPTTPTGRRGSHKDRAVTIGRGNPASTTSPNPAKEA
TTPRDRAVSTGSRVFFGPRQPTTPTSLRAARAAKNAKISSASTTSPQPAE
AAVTTPRGMATSASTRVPSSARQPTTPTGRRGNNNDRAATDRESQALRSS
SEPTGAARTPRSIPGATRDRISLVARQAAEGLRRRSMSARASTNRGGKLA
SGRSSEQADATRPSVTNSLLADASSSVVASNSAQGLGSTSSGGTIEGRHP
TAQISVGAPEDSGSGMEPSPIVFATGEDSLLEAPSASEPSEMEPAEPAEA
VQAGGQTRDRPVQRPRSEFAPRPTCSMAEYMMPQIQLLNALQRTVLLNPF
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