prot_E-siliculosus-1a_M_contig9.17095.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17095.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17095.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length306
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig9.17095.1 vs. uniprot
Match: D7G4L8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L8_ECTSI)

HSP 1 Score: 545 bits (1404), Expect = 6.850e-195
Identity = 283/301 (94.02%), Postives = 288/301 (95.68%), Query Frame = 0 
Query:    5 LCSLARLGLFKSANDAKSRFIHKHIRAATALAKSSSSPEVGEGMGMAEPLPRHWGGPPEFPRAKVAAPVAVMATEAALEDYRQRRRAERIRDHRSLGSRSKSQGPGPEGVKSLTSAVPIASARGARLQRGRSDDGFVVGKKTNHREHPSPRHLHQHLRHHPHPYQRGGHNSDQRQPKHRPPSTHAVILPKGGGLVLIGEDGVRKSKFPRGCEPSAAAMAAANVATTPPLQSKSSGESEDDDVLARLCNPKHFTGTAATGHLPVVVDLEGGVGVLLKGASIAVKYHIGKQEVSWRLRLAERL 305
            L SLARLGLFKSANDAKSRFIHKHIRAATAL+ +SSSPEVGEGMGM EPLPRHWGGPPEFPRAKVAAPVAVMATEAALEDYRQRRRAERIRDHRSLGSRSKSQGPGPEGVKSLTS VP ASARGARLQRGRS+D FVVGKKTNH EHPSPRH HQHLRHHPHP QRGGHNSDQRQPKHRPPSTHAVILPKGGGLVLIGEDGVRKSKFPRGCE SAAAMA  +VATTPPL+SKSSGESEDDDVLARLCNPKHFTGTAATGHLPVVVDLEGGVGVLLKGASIAVK HIGKQEVSWRLRLAERL
Sbjct:    7 LPSLARLGLFKSANDAKSRFIHKHIRAATALSHTSSSPEVGEGMGMPEPLPRHWGGPPEFPRAKVAAPVAVMATEAALEDYRQRRRAERIRDHRSLGSRSKSQGPGPEGVKSLTSVVPKASARGARLQRGRSEDSFVVGKKTNHCEHPSPRHPHQHLRHHPHPCQRGGHNSDQRQPKHRPPSTHAVILPKGGGLVLIGEDGVRKSKFPRGCELSAAAMA--SVATTPPLESKSSGESEDDDVLARLCNPKHFTGTAATGHLPVVVDLEGGVGVLLKGASIAVKDHIGKQEVSWRLRLAERL 305
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BLAST of mRNA_E-siliculosus-1a_M_contig9.17095.1 vs. uniprot
Match: A0A6H5KLC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLC7_9PHAE)

HSP 1 Score: 430 bits (1106), Expect = 4.250e-149
Identity = 238/301 (79.07%), Postives = 246/301 (81.73%), Query Frame = 0 
Query:    5 LCSLARLGLFKSANDAKSRFIHKHIRAATALAKSSSSPEVGEGMGMAEPLPRHWGGPPEFPRAKVAAPVAVMATEAALEDYRQRRRAERIRDHRSLGSRSKSQGPGPEGVKSLTSAVPIASARGARLQRGRSDDGFVVGKKTNHREHPSPRHLHQHLRHHPHPYQRGGHNSDQRQPKHRPPSTHAVILPKGGGLVLIGEDGVRKSKFPRGCEPSAAAMAAANVATTPPLQSKSSGESEDDDVLARLCNPKHFTGTAATGHLPVVVDLEGGVGVLLKGASIAVKYHIGKQEVSWRLRLAERL 305
            L SLARLGLFKSANDAKSRFI+KHIRAAT LA +SSSPEVGEGMG  EPLPRH  GPPEFPRAKVAAPVAVMATEAALEDYRQRRRAE IRDHR  GS+S+ QGPGPEG+KSL SAVP ASARGA L+RGRSDDGFVV KKTN REHPSPRH HQ+LRH       G HNSDQ QPK R PSTHAVILPKGGGLVLIGEDGVRKSKFPRGCEPS+A                        DVLARLCNPKHFTGTAATG LPVVVDLE GVGVLLKGASIAVK HIGKQEVSWRLRLAERL
Sbjct:   35 LPSLARLGLFKSANDAKSRFINKHIRAAT-LAHTSSSPEVGEGMGRQEPLPRHCSGPPEFPRAKVAAPVAVMATEAALEDYRQRRRAEIIRDHRGPGSKSEPQGPGPEGLKSLASAVPKASARGASLRRGRSDDGFVVSKKTNQREHPSPRHPHQYLRHXXXXXXXGEHNSDQPQPKQRSPSTHAVILPKGGGLVLIGEDGVRKSKFPRGCEPSSATXXXXXXXXXXXXXXX--XXXXXXDVLARLCNPKHFTGTAATGRLPVVVDLERGVGVLLKGASIAVKDHIGKQEVSWRLRLAERL 332
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17095.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4L8_ECTSI6.850e-19594.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLC7_9PHAE4.250e-14979.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..305
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:2006141..2008184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17095.1mRNA_E-siliculosus-1a_M_contig9.17095.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 2006141..2008184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17095.1 ID=prot_E-siliculosus-1a_M_contig9.17095.1|Name=mRNA_E-siliculosus-1a_M_contig9.17095.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=306bp
MWFCLCSLARLGLFKSANDAKSRFIHKHIRAATALAKSSSSPEVGEGMGM
AEPLPRHWGGPPEFPRAKVAAPVAVMATEAALEDYRQRRRAERIRDHRSL
GSRSKSQGPGPEGVKSLTSAVPIASARGARLQRGRSDDGFVVGKKTNHRE
HPSPRHLHQHLRHHPHPYQRGGHNSDQRQPKHRPPSTHAVILPKGGGLVL
IGEDGVRKSKFPRGCEPSAAAMAAANVATTPPLQSKSSGESEDDDVLARL
CNPKHFTGTAATGHLPVVVDLEGGVGVLLKGASIAVKYHIGKQEVSWRLR
LAERL*
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