prot_E-siliculosus-1a_M_contig9.17080.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17080.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17080.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length668
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17080.1 vs. uniprot
Match: A0A6H5JA94_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA94_9PHAE)

HSP 1 Score: 933 bits (2411), Expect = 0.000e+0
Identity = 528/626 (84.35%), Postives = 546/626 (87.22%), Query Frame = 0
Query:   42 TSASSTVWRARGARFGSGGPRMAAGVVVAGASVGEAPSXXXXXXXXXXXXXXGSSNMALPRLNAPPHDYVRHAYSPRAGPLWISVAAFLGWTEELARDLISFGGVYYKPGGAPASAKPKRELDPHREVEIGEYLRIFPEPRRYPAFFGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNVAENMLAGIRGVRPGLDLLLPHRLDIDTSGLVIVAKGAETLRSINEIIKRPGLILQTGIDSPRDRRRKNKALRRAAKLANGTANIKTPVHQEASMTAAAAATESEALPETPQVGRVIPPTQALATVAGGEEAAAETGAVENAVGEITKRYRALVQVLPGRSPLKASPIPLTHFQKVSRRAPKEFRRDRPPEPNATSNARSADTPGGGEDDEGSWIECRLLVLSASEASDSPVVTSAGFPTRTGGSIKGGVGGGGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDYLYGPAVREASPTGPAEPSATAAATTPVVVGGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRSSPAPAAAAMEPGLVTEEKNVRQLGPQAGFQGDDKGSRSGFVESPKMALQASHISLELEAEGGGRARHAFTLARDTCWWAGEGWGACVSAE 667
            T ASS +WR RG RF SGG R+ A  VVAG SVG+ P                S +  LPRLNAPPHDYVRHAYSPRAGPLW SVAAFLGWTEELAR LI+FGGVYYKPGGAPASAKPKRELDP REVEIGEYLRIFP+PRRYPAF GVDWESKIVYDCAGVMLVNKPAGVPAHATVDN AENMLAGIRGVRPGLDLLLPHRLD DTSGLVIVAKGA+TLRSINEIIKRPGL+LQTG DSPRDRRRKNKALRRAAKLA+GTANIKTPV +EASMT AAAATESEALPETPQVGR IPPTQA AT AG E AAAETGAV+NAVG ITKRYRALV+VLPG SPLKASPIPLTHFQKVSRRAPK+FRRDRPP+P ATSNAR ADTPGGGEDDEGSWIECRLLVLSASEAS S VVT AGFPTRTG SIKGG    GVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGD LYGPAVRE SPTGPAEP+ATAA TTP VVGG  XXXXXXXXXXXXXXXXXXXXXXXXXXXX   LR SPAPAAAA EPGLV EE+ VRQ+G QAGFQGD+   R GFVESPKMALQA HISLELEAE GGR RHAFTLARDTCWW  EG GACVSAE
Sbjct:    4 TIASSVIWRTRGGRFNSGGARIGAEGVVAGDSVGDDPFPTPAPTASTAARGDESGSRPLPRLNAPPHDYVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPASAKPKRELDPDREVEIGEYLRIFPKPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRGVRPGLDLLLPHRLDNDTSGLVIVAKGADTLRSINEIIKRPGLMLQTGDDSPRDRRRKNKALRRAAKLADGTANIKTPVSEEASMTEAAAATESEALPETPQVGRAIPPTQAFATGAGAEAAAAETGAVQNAVGAITKRYRALVEVLPGSSPLKASPIPLTHFQKVSRRAPKDFRRDRPPQPKATSNARLADTPGGGEDDEGSWIECRLLVLSASEASVSSVVTPAGFPTRTGDSIKGGXXXXGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDNLYGPAVRETSPTGPAEPAATAAETTPAVVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFVLRRSPAPAAAATEPGLVVEEEAVRQVGLQAGFQGDETSCRGGFVESPKMALQACHISLELEAEDGGRERHAFTLARDTCWWVDEGRGACVSAE 629          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17080.1 vs. uniprot
Match: D7G4K2_ECTSI (Putative RNA pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K2_ECTSI)

HSP 1 Score: 827 bits (2137), Expect = 2.440e-296
Identity = 461/633 (72.83%), Postives = 474/633 (74.88%), Query Frame = 0
Query:   63 MAAGVVVAGASVGEAPSXXXXXXXXXXXXXXGSSNMALPRLNAPPHDYVRHAYSPRAGPLWISVAAFLGWTEELARDLISFGGVYYKPGGAPASAKPKRELDPHREVEIGEYLRIFPEPRRYPAFFGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNVAENMLAGIRGVRPGLDLLLPHRLDIDTSGLVIV----------------------AKGAETLRSINEIIKRPGLILQTGIDSPRDRRRKNKALRRAAKLANGTANIKTPVHQEASMTAA----AAATESEALPETPQVGRVIPPTQALATVAGGEEAA--AETGAVENAVGEITKRYRALVQVLPGRSPLKASPIPLTHFQKVSRRAPKEFRRDRPPEPNATSNARSADTPGGGEDDEGSWIECRLLVLSASEASDSPVVTSAGFPTRTGGSIKGGVGGGGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDYLYGPAVREASPTGPAEPSATAAATTPVVVGGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRSSPAPAAAAMEPGLVTEEKNVRQLGPQAGFQGDDKGSRSGFVESPKMALQASHISLELEAEGGGRARHAFTLARDTCWWAGEGWGACVSAE 667
            MAAGVVVAG SVG+AP               G+S+  LPRLNAPPHDYVRHAYSPRAGPLW SVAAFLGWTEELAR LI+FGGVYYKPGGAPA AKPKRELDP REVEIGEYLRIFPEPRRYPAF GVDWESKIVYDCAGVMLVNKPAGVPAHATVDN AENMLAGIR VRP LDLLLPHRLDIDTSGLVIV                      AKGA TLRSINEIIKRPGLIL+TGIDSPRDRRRKNKALRRAAKL NGTANIKTPV+QEASMTAA    AAA ESEALPET QVGR IPPTQA AT AG       AETGAVENAVG ITKRYRALVQVLPGRSPLKASPIP+THFQKVSRRAPKEFRRDRPP+PNATSNARSADTPGGGEDDEGSWIECRLLVLSASEAS SPVVTSAGFP+RTGGSIKGG+G GGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDYLYGPA                                                                              E++VRQ G QAGFQ D+  SRSGFVESPKMALQASHISLELEAE G R RH FTLARDTCWW  EGWGACVS E
Sbjct:    1 MAAGVVVAGDSVGDAPFPTPEPTASTVARGDGTSSRPLPRLNAPPHDYVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPALAKPKRELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRSVRPDLDLLLPHRLDIDTSGLVIVVTRNLGVQELGLARNRTKHAGRAKGAGTLRSINEIIKRPGLILRTGIDSPRDRRRKNKALRRAAKLTNGTANIKTPVYQEASMTAATAASAAAAESEALPETSQVGRAIPPTQAFATGAGXXXXXXXAETGAVENAVGAITKRYRALVQVLPGRSPLKASPIPMTHFQKVSRRAPKEFRRDRPPQPNATSNARSADTPGGGEDDEGSWIECRLLVLSASEASVSPVVTSAGFPSRTGGSIKGGIGDGGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDYLYGPA------------------------------------------------------------------------------EESVRQPGLQAGFQRDENDSRSGFVESPKMALQASHISLELEAEDGRRERHVFTLARDTCWWFDEGWGACVSDE 555          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17080.1 vs. uniprot
Match: A0A836C7F4_9STRA (Pseudouridine synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7F4_9STRA)

HSP 1 Score: 130 bits (327), Expect = 4.840e-31
Identity = 62/148 (41.89%), Postives = 88/148 (59.46%), Query Frame = 0
Query:  109 DYVRHAYSPRAGPLWISVAAFLGWTEELARDLISFGGVYYKPGGAPASAKPKRELDPHREVEIGEYLRIFPEPRRYPAFFGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNVAENMLAGIRGVRPGLDLLLPHRLDIDTSGLVIVAK 256
            +Y RHAY+P     W  +   LG  E  AR +I FGG Y  P   P   K +R  DP   +  G+Y+RI P PR+YP     DW++ ++ +    MLVNKPA VP+H TVDN+  N++A ++ +RPG  +   HRLD+ TSGL+++ K
Sbjct:   10 EYARHAYAPSDAAAWQVLVDVLGVDESRARYIIVFGGFYLMP---PGDVKARRVSDPTHAMTKGQYMRIHPMPRQYPVCATTDWDASVLQENDWCMLVNKPAAVPSHPTVDNLHHNVVACLKPLRPGTQISAAHRLDVATSGLIVMCK 154          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17080.1 vs. uniprot
Match: A0A6U0VH21_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VH21_9STRA)

HSP 1 Score: 102 bits (255), Expect = 2.040e-20
Identity = 53/112 (47.32%), Postives = 73/112 (65.18%), Query Frame = 0
Query:  149 KPGGAPASAKPKRELDPHREVEIGEYLRIFPEPRRYPAFFGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNVAENMLAGIR----GVRPGLDLLLPHRLDIDTSGLVIVAK 256
            KP G     +P+R LDP   +E G+Y+R++P P RYP   G+DW+ +I+   A  ++V+KPAG+P+HAT DN+ EN L  +R    G      L LPHRLDIDTSG++I AK
Sbjct:   32 KPSGY---RRPERVLDPGFPLEPGDYVRVYPVPARYPEALGIDWDKRILRMDADFVVVDKPAGIPSHATKDNLRENTLEQLRLHFAGEAFSDALRLPHRLDIDTSGVLIAAK 140          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17080.1 vs. uniprot
Match: K7PEZ7_9BACT (Pseudouridine synthase n=1 Tax=uncultured bacterium TaxID=77133 RepID=K7PEZ7_9BACT)

HSP 1 Score: 99.8 bits (247), Expect = 2.170e-19
Identity = 57/158 (36.08%), Postives = 85/158 (53.80%), Query Frame = 0
Query:  111 VRHAYSPRAGPLWISVAAFLGWTEELARDLISFGGVYYKPGGAPASAKPKRELDPHREVEIGEYLRIFPEPRRYPAFFGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNVAENMLAGIRGVRPGLDLLLPHRLDIDTSGLVIVAKGAETLRSINEII 268
            V H  +  A  L   +    G T E    L+SFG VY          + ++ +D  R +  G+Y+R+   P+R+P   G+DW + IV+     ++VNKPAG+P HAT+DN  EN+L  +R V  G  L +  RLD D SGL++VA+  E  R  N ++
Sbjct:   11 VGHYVAKEATTLVECLVQHFGLTTEEGERLVSFGSVY----------QDRQRVDSDRALSPGQYIRVHLNPKRFPVE-GIDWATTIVHRDKAFVVVNKPAGIPVHATLDNQVENLLHQLR-VALGGALYVTQRLDTDVSGLIVVARTQEFQRQFNRLL 156          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17080.1 vs. uniprot
Match: A0A8J5XJB9_DIALT (PseudoU_synth_2 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJB9_DIALT)

HSP 1 Score: 97.4 bits (241), Expect = 5.460e-18
Identity = 56/138 (40.58%), Postives = 75/138 (54.35%), Query Frame = 0
Query:  121 PLWISVAAFLGWTEELARDLISFGGVYYKPGGAPASAKPKRELDPHREVEIGEYLRIFPEPRRYPAFFGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNVAENMLAGIRGVRPGLDLLLPHRLDIDTSGLVIVAKGA 258
            P   +VA  L   E  A  L + G VY   GG       +R LDP   V    ++R+   PRRYPA    DW   +V+D    +++NKP GVP HATVDNV E   A + G   G+ L  PHRLD+ T GL++++KG+
Sbjct:   58 PAASTVAQLLELDEAHAAWLCALGAVYV--GG-------ERALDPRAPVGANAHVRVHTRPRRYPAADATDWRRAVVHDGGSFVVLNKPRGVPTHATVDNVVETCQAQL-GALLGVPLGCPHRLDVPTRGLLVLSKGS 185          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17080.1 vs. uniprot
Match: UPI001991E353 (RluA family pseudouridine synthase n=1 Tax=Moraxellaceae bacterium TaxID=1889775 RepID=UPI001991E353)

HSP 1 Score: 94.0 bits (232), Expect = 2.090e-17
Identity = 52/155 (33.55%), Postives = 82/155 (52.90%), Query Frame = 0
Query:  111 VRHAYSPRAGPLWISVAAFLGWTEELARDLISFGGVYYKPGGAPASAKPKRELDPHREVEIGEYLRIFPEPRRYPAFFGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNVAENMLAGIRGVRPGLDLLLPHRLDIDTSGLVIVAKGAETLRSIN 265
            V+H YSP  G     + + L   + +  +L   G VY            +R LD +  V  G  +R+  +PRRY  F   DW+S+IV++    +++NKP+G+P+H +VDNV EN L  +      + LL+ HRLD  T GL++  K  E +++ N
Sbjct:   14 VKHFYSPADGLAIDIIQSALNLDQSVVLNLFLLGAVYINH---------QRVLDANHAVNYGHQMRVHTKPRRY--FVEYDWKSRIVFEHDDFVILNKPSGLPSHPSVDNVIENSLTQLERAL-NIKLLISHRLDTTTEGLIVYGKKPEFVKAFN 156          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17080.1 vs. uniprot
Match: UPI0019CE451B (RluA family pseudouridine synthase n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=UPI0019CE451B)

HSP 1 Score: 92.0 bits (227), Expect = 8.650e-17
Identity = 48/155 (30.97%), Postives = 83/155 (53.55%), Query Frame = 0
Query:  111 VRHAYSPRAGPLWISVAAFLGWTEELARDLISFGGVYYKPGGAPASAKPKRELDPHREVEIGEYLRIFPEPRRYPAFFGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNVAENMLAGIRGVRPGLDLLLPHRLDIDTSGLVIVAKGAETLRSIN 265
            V+H +SP  G     +   L   + +  DL   G +Y            +R LDP++ V  G  +R+  +PRRY   +  DW+S+++++    +++NKP+G+P+H +VDNV EN L  +      + LL+ HRLD  T G+++  K  E +++ N
Sbjct:    8 VKHFHSPDDGMAIDIIKNALILDQTVVADLFQLGAIYINN---------QRCLDPNQTVSYGHQMRVHTKPRRYDVNY--DWKSRVIFEHDDFVILNKPSGLPSHPSVDNVIENSLTQLERAL-NIKLLISHRLDTTTEGIIVYGKKTEFVKAFN 150          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17080.1 vs. uniprot
Match: A0A4Q6D5X0_9PROT (RluA family pseudouridine synthase (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6D5X0_9PROT)

HSP 1 Score: 90.1 bits (222), Expect = 3.070e-16
Identity = 53/158 (33.54%), Postives = 86/158 (54.43%), Query Frame = 0
Query:  111 VRHAYSPRAGPLWISVAAFLGWTEELARDLISFGGVYYKPGGAPASAKPKRELDPHREVEIGEYLRIFPEPRRYPAFFGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNVAENMLAGIRGVRPGLDLLLPHRLDIDTSGLVIVAKGAETLRSINEII 268
            VRH  SPR G L  S  A      ++  +L+  G +Y +        +   E+D    V  G+Y+R+  +PRRY    G+ W+ ++++     ++VNKP+G+P HATVDN+ EN+   +     G ++ + HRLD+ TSGL++ AK  E L   N ++
Sbjct:   16 VRHLLSPREGRL--SEIAHEALNIDVT-ELLKLGAIYVEGN------RTITEMD----VREGDYIRVHTKPRRYNTELGL-WQERVLFQDENFLVVNKPSGLPVHATVDNLVENLQTCL-AKELGCEIFVTHRLDVPTSGLIVFAKTREFLALFNHLL 158          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17080.1 vs. uniprot
Match: A0A7S4AGN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AGN3_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.540e-15
Identity = 102/323 (31.58%), Postives = 140/323 (43.34%), Query Frame = 0
Query:  205 LVNKPAGVPAHATVDNVAENMLAGIRGVRPGLDLLLPHRLDIDTSGLVIVAKGAETLRSINEIIKRPGLILQTGIDSPRDRRRKNKALRRAAKLANGTANIKTPVHQEASMTAAAAATESEALPETPQVGRVIPPT-QALATVAGGEEAAAETGAVENAVGEITKRYRALVQVLPGRSPLKASPIPLTHFQKVSRRAPKEFRRDRPPEPNATSNARSADTPGGGED---DEGS----WIECRLLVLSASEASDSPVVTSAGFPTRTGGSIKGGVGGGGVS-------TGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDYLY 512
            ++NKPAG+P+H TVDN  EN+L   +  R      LP RLD +TSGL+++A   +T    +++++R      T I +      K KA+                    A+ TA AAA  S +L    ++   I    + L + + GE           A   I KRY+      PG          + HF   + +APK F  D            + +  GGG+D   D GS    W+ CRL + S S               R    +    GG  VS       T    E+E++LLTGRTHQIRGQLAA GCPI GD LY
Sbjct:  161 VLNKPAGLPSHPTVDNAVENLLYQYQRHRRLTYASLPQRLDTETSGLIVIATNPKTASYFSKLLERKTADAVTAIQATT----KEKAI-------------------AATDTAVAAADVSLSLSSASRLQTSIQKRYRCLVSFSSGE-----------AWDSIRKRYQE-----PGSI--------VEHFVDANSKAPKTFVADT-----------NHNMVGGGDDHDHDNGSKKRRWLLCRLRIRSMSPPMIPQQRLQLREYVRVPQVVPPPAGGETVSVSQADSQTACCSELEIELLTGRTHQIRGQLAALGCPIVGDPLY 425          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA94_9PHAE0.000e+084.35PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
D7G4K2_ECTSI2.440e-29672.83Putative RNA pseudouridylate synthase n=1 Tax=Ecto... [more]
A0A836C7F4_9STRA4.840e-3141.89Pseudouridine synthase (Fragment) n=1 Tax=Tribonem... [more]
A0A6U0VH21_9STRA2.040e-2047.32Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
K7PEZ7_9BACT2.170e-1936.08Pseudouridine synthase n=1 Tax=uncultured bacteriu... [more]
A0A8J5XJB9_DIALT5.460e-1840.58PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
UPI001991E3532.090e-1733.55RluA family pseudouridine synthase n=1 Tax=Moraxel... [more]
UPI0019CE451B8.650e-1730.97RluA family pseudouridine synthase n=1 Tax=Bdellov... [more]
A0A4Q6D5X0_9PROT3.070e-1633.54RluA family pseudouridine synthase (Fragment) n=1 ... [more]
A0A7S4AGN3_9STRA1.540e-1531.58Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 203..269
e-value: 6.9E-7
score: 29.5
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 165..555
NoneNo IPR availablePANTHERPTHR21600:SF52RNA PSEUDOURIDINE SYNTHASE 6, CHLOROPLASTICcoord: 165..555
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..667
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 479..517
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 190..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1830305..1841158 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17080.1mRNA_E-siliculosus-1a_M_contig9.17080.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 1830305..1841158 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17080.1 ID=prot_E-siliculosus-1a_M_contig9.17080.1|Name=mRNA_E-siliculosus-1a_M_contig9.17080.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=668bp
MPSLWPTAATVISMACRWGLATATILIRAAAGLSVTARPTRTSASSTVWR
ARGARFGSGGPRMAAGVVVAGASVGEAPSPTPAPTASAAASGDGSSNMAL
PRLNAPPHDYVRHAYSPRAGPLWISVAAFLGWTEELARDLISFGGVYYKP
GGAPASAKPKRELDPHREVEIGEYLRIFPEPRRYPAFFGVDWESKIVYDC
AGVMLVNKPAGVPAHATVDNVAENMLAGIRGVRPGLDLLLPHRLDIDTSG
LVIVAKGAETLRSINEIIKRPGLILQTGIDSPRDRRRKNKALRRAAKLAN
GTANIKTPVHQEASMTAAAAATESEALPETPQVGRVIPPTQALATVAGGE
EAAAETGAVENAVGEITKRYRALVQVLPGRSPLKASPIPLTHFQKVSRRA
PKEFRRDRPPEPNATSNARSADTPGGGEDDEGSWIECRLLVLSASEASDS
PVVTSAGFPTRTGGSIKGGVGGGGVSTGMLQEVEVQLLTGRTHQIRGQLA
AEGCPIYGDYLYGPAVREASPTGPAEPSATAAATTPVVVGGTTATASATL
AEPAGGSTATASATTPRPTGGTFVLRSSPAPAAAAMEPGLVTEEKNVRQL
GPQAGFQGDDKGSRSGFVESPKMALQASHISLELEAEGGGRARHAFTLAR
DTCWWAGEGWGACVSAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf
IPR006145PsdUridine_synth_RsuA/RluA