prot_E-siliculosus-1a_M_contig9.17076.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig9.17076.1
Unique Name	prot_E-siliculosus-1a_M_contig9.17076.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	581

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17076.1 vs. uniprot
Match: A0A6H5JAF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAF4_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 1.110e-47
Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 0

Query:  354 VARMGPMLQVHGNQLTVDWDKSPATDGGGWQNRLEPYNNISIIATLLAGFGLAIFPLPRSDLPEGHDFLLGLTGHVVYNFLMCCSFSTNVLV 445
            VAR+GPML VHGNQLTVDWDKSPATDGGGWQNRLEPY+NISIIATL AG GLAIFPLPRS++PEGH FLLGLTGHVVYNFLMCCSFSTN+LV
Sbjct:  122 VARLGPMLLVHGNQLTVDWDKSPATDGGGWQNRLEPYSNISIIATLFAGVGLAIFPLPRSNVPEGHGFLLGLTGHVVYNFLMCCSFSTNMLV 213

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17076.1 vs. uniprot
Match: D8LL09_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL09_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 1.910e-20
Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 0

Query:    1 MAQTDREALVALYDATGGANWTNNENWITVDDLSQWHGVKINDDGRVVRLQLFSNNLRGRIPEAIGTLSELRLL 74
            M QTDR+ALVALYDA GG NW NN NW    DLS+WHG+ IND GRVV + L +NNL+G IPEA+G LS+L  L
Sbjct:   51 MPQTDRDALVALYDAAGGFNWKNNGNWNADADLSKWHGININDQGRVVEVHLAANNLQGSIPEALGALSKLERL 124

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17076.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 3.580e-20
Identity = 48/71 (67.61%), Postives = 56/71 (78.87%), Query Frame = 0

Query:    1 MAQTDREALVALYDATGGANWTNNENWITVDDLSQWHGVKINDDGRVVRLQLFSNNLRGRIPEAIGTLSEL 71
            MAQTDR+ALVALY+ATGGA W NN+NW T   LSQWHGV++N  GRVV+L L  NNLRG IP+ +G LS L
Sbjct:   71 MAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNNLRGPIPKELGALSRL 141

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17076.1 vs. uniprot
Match: D8LFJ9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ9_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 1.210e-19
Identity = 48/74 (64.86%), Postives = 53/74 (71.62%), Query Frame = 0

Query:    1 MAQTDREALVALYDATGGANWTNNENWITVDDLSQWHGVKINDDGRVVRLQLFSNNLRGRIPEAIGTLSELRLL 74
            MAQTDREALVALY A GGA W NN NW T   LSQWHGV++N  GRVV L L+ NNL+GRIP  +G L  L  L
Sbjct:   25 MAQTDREALVALYTAIGGAKWRNNRNWNTSAALSQWHGVEVNSQGRVVNLFLWDNNLQGRIPTELGNLHMLDTL 98

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17076.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.250e-19
Identity = 44/72 (61.11%), Postives = 53/72 (73.61%), Query Frame = 0

Query:    1 MAQTDREALVALYDATGGANWTNNENWITVDDLSQWHGVKINDDGRVVRLQLFSNNLRGRIPEAIGTLSELR 72
            MAQTDR+ALVALY ATGG NW  ++NW T  DL  WHGV +ND GRVV+L+L  NNL G IP  +G L+ L+
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQ 72

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17076.1 vs. uniprot
Match: D7G496_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G496_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 2.340e-17
Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = 0

Query:    1 MAQTDREALVALYDATGGANWTNNENWITVDDLSQWHGVKINDDGRVVRLQLFSNNLRGRIPEAIGTLSELRLL 74
            MAQTDR+ALVALY+ATGG  W NN+NW T   LSQW+ V++N  GRVV+L L++NNL+G IP  +G L+ L  L
Sbjct:  125 MAQTDRKALVALYNATGGVKWKNNQNWNTSAALSQWYRVEVNSQGRVVKLSLWNNNLQGPIPVEVGRLAVLEYL 198

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17076.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 4.570e-17
Identity = 41/71 (57.75%), Postives = 49/71 (69.01%), Query Frame = 0

Query:    4 TDREALVALYDATGGANWTNNENWITVDDLSQWHGVKINDDGRVVRLQLFSNNLRGRIPEAIGTLSELRLL 74
            TDR ALVAL++ATGGANW  N  W T   L QW+GV++ND GRVV+L L  NNL+G IP  +G L  L  L
Sbjct:   11 TDRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNNLKGHIPRQLGDLGALMTL 81

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17076.1 vs. uniprot
Match: A0A6H5KVC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC7_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 5.570e-17
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 0

Query:    1 MAQTDREALVALYDATGGANWTNNENWITVDDLSQWHGVKINDDGRVVRLQLFSNNLRGRIPEAIGTLSELRLL 74
            MAQ DREALVALY+ATGGA W N  NW T   LSQW+GV+++  GRVV L L  NNL+G IP  +G L+ L+ L
Sbjct:   96 MAQPDREALVALYNATGGAKWENKRNWNTRAALSQWYGVEVDSQGRVVTLSLAGNNLQGTIPPELGQLTALQFL 169

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17076.1 vs. uniprot
Match: A0A6H5KQQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ0_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 6.040e-17
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 0

Query:    1 MAQTDREALVALYDATGGANWTNNENWITVDDLSQWHGVKINDDGRVVRLQLFSNNLRGRIPEAIGTLSELRLL 74
            MA  DR+ALVAL+ +TGGA WT  +NW T  D + W GVK+ND GRVV + L SNNL+G IP+ +G L++L  L
Sbjct:    1 MASKDRDALVALFCSTGGAGWTRRDNWNTDADRATWFGVKVNDQGRVVDVDLGSNNLQGPIPKELGALAKLASL 74

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17076.1 vs. uniprot
Match: D7FH90_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH90_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.100e-16
Identity = 44/71 (61.97%), Postives = 51/71 (71.83%), Query Frame = 0

Query:    1 MAQTDREALVALYDATGGANWTNNENWITVDDLSQWHGVKINDDGRVVRLQLFSNNLRGRIPEAIGTLSEL 71
            M+  DR ALVAL+ +TGG  W  N  W T  DLSQW GV +N+DGRVV+L LF NNL GRIPEA+G L EL
Sbjct:    1 MSSEDRAALVALFRSTGGTRWDRNNKWDTDADLSQWSGVHVNEDGRVVKLDLFYNNLEGRIPEALGALQEL 71

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig9.17076.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig9.17076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JAF4_9PHAE	1.110e-47	90.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LL09_ECTSI	1.910e-20	64.86	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
D8LFK2_ECTSI	3.580e-20	67.61	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
D8LFJ9_ECTSI	1.210e-19	64.86	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5JK91_9PHAE	1.250e-19	61.11	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G496_ECTSI	2.340e-17	59.46	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5K3D6_9PHAE	4.570e-17	57.75	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KVC7_9PHAE	5.570e-17	59.46	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KQQ0_9PHAE	6.040e-17	55.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FH90_ECTSI	1.100e-16	61.97	Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00019	LEURICHRPT	coord: 191..204 score: 55.26 coord: 236..249 score: 50.55
None	No IPR available	SMART	SM00365	LRR_sd22_2	coord: 284..310 e-value: 32.0 score: 11.4 coord: 140..166 e-value: 88.0 score: 7.9 coord: 92..124 e-value: 27.0 score: 12.0 coord: 188..214 e-value: 11.0 score: 15.0 coord: 236..262 e-value: 570.0 score: 1.3
None	No IPR available	PANTHER	PTHR45974	FAMILY NOT NAMED	coord: 174..275
None	No IPR available	PANTHER	PTHR45974	FAMILY NOT NAMED	coord: 96..179
None	No IPR available	PANTHER	PTHR45974:SF35		coord: 127..220
None	No IPR available	PANTHER	PTHR45974:SF35		coord: 150..253
None	No IPR available	PANTHER	PTHR45974:SF35		coord: 174..275 coord: 51..148 coord: 219..311
None	No IPR available	PANTHER	PTHR45974:SF35		coord: 297..353
None	No IPR available	PANTHER	PTHR45974:SF35		coord: 96..179
None	No IPR available	PANTHER	PTHR45974	FAMILY NOT NAMED	coord: 150..253
None	No IPR available	PANTHER	PTHR45974	FAMILY NOT NAMED	coord: 51..148 coord: 219..311
None	No IPR available	PANTHER	PTHR45974	FAMILY NOT NAMED	coord: 297..353 coord: 127..220
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..392
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 456..479
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 480..503
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 411..429
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 509..533
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 504..508
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 430..455
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 393..410
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 534..580
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 38..370
None	No IPR available	TMHMM	TMhelix		coord: 483..505
None	No IPR available	TMHMM	TMhelix		coord: 510..532
None	No IPR available	TMHMM	TMhelix		coord: 429..451
None	No IPR available	TMHMM	TMhelix		coord: 390..409
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 164..187 e-value: 140.0 score: 3.9 coord: 236..260 e-value: 4.9 score: 15.8 coord: 116..140 e-value: 32.0 score: 9.1 coord: 284..308 e-value: 35.0 score: 8.8 coord: 188..212 e-value: 18.0 score: 11.2 coord: 68..91 e-value: 410.0 score: 0.1 coord: 92..115 e-value: 200.0 score: 2.7
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 1..156 e-value: 1.2E-44 score: 154.0
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 253..375 e-value: 2.2E-30 score: 107.4 coord: 157..252 e-value: 3.1E-34 score: 119.9
IPR001611	Leucine-rich repeat	PFAM	PF00560	LRR_1	coord: 238..260 e-value: 0.54 score: 11.0
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 118..177 e-value: 1.5E-7 score: 31.1
IPR029201	Jiraiya	PFAM	PF15038	Jiraiya	coord: 434..526 e-value: 1.1E-8 score: 34.7

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig9	contig	E-siliculosus-1a_M_contig9:1775443..1786859 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig9.17076.1	mRNA_E-siliculosus-1a_M_contig9.17076.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig9 1774762..1794116 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17076.1 ID=prot_E-siliculosus-1a_M_contig9.17076.1|Name=mRNA_E-siliculosus-1a_M_contig9.17076.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=581bp
MAQTDREALVALYDATGGANWTNNENWITVDDLSQWHGVKINDDGRVVRL
QLFSNNLRGRIPEAIGTLSELRLLLLYDNILTGFIPETLGDLTNLEGLYV
SNNKLKGPIPKELGNLTKLEALDVHSNKLTGPIPEELGNLAKLEMLSVNY
NELTGPIPKEIGNLTKLVMLSLNNNKLSGRIPKELGALTRLTNLDLSQNK
LSGTIPKELGNLTALTSLGLRLNGLGGPIPPELTNLGNLQHLHLSENRLT
GTIPKELGNLAALVTLWLLKNRLEGPIPPELGNLENLQQLCLSQNQLTGP
IPKELGNLASLVVLLLDINKLEGSIPPELVNLGILYQCNLSSNRLKGIIP
KELVARMGPMLQVHGNQLTVDWDKSPATDGGGWQNRLEPYNNISIIATLL
AGFGLAIFPLPRSDLPEGHDFLLGLTGHVVYNFLMCCSFSTNVLVTVVLT
LQLYFTQRLATLHSPTVAERFMRTTQGIRHLAVCSFFFFSLPAFMIAFVI
LLFTVLEDAAAICTSVVTLIGLGLVGGSTSYYFRAFKNVVHTTVPMTRPS
AQLTAAQAAEWQAPQQKMAQCSAVPHNLRF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029201	Jiraiya
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf
IPR003591	Leu-rich_rpt_typical-subtyp