mRNA_E-siliculosus-1a_M_contig9.17075.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17075.1 vs. uniprot
Match: A0A6H5JG15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG15_9PHAE) HSP 1 Score: 1305 bits (3376), Expect = 0.000e+0 Identity = 1040/1225 (84.90%), Postives = 1059/1225 (86.45%), Query Frame = 1
Query: 343 MAAAVGTSCIPPPVSTGNPTAGTAADAGPEGXXXXXXXXXXXXXXXXXXXXXXVKGGGDCDGFNANVNQQTPSAAANGVGAAGXXAEVLRPEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPTARGRTLVSLQLKKEELXXXXVLPPSACTTPAESPRNPDPVMDAFRSPAASPWLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SVDAFCVSPFSPRVSPRALMSSPVGIDGPARDGSFSLSSSPSSQRGAFAGSGRLEGSDWWKGLDLSPDRSGLPRWRESRKPVAMASSLPSDNVTENDGGGKTKTTVEMTSGAVAAGLHDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGRATGEVSATEQAFQPVTVEGRLRQLEAENLRLRFRVADLEGQVSVMEDELDRRGVARPMPADANSSSNAESCRTGIAGTAVVASADDKSNA--CRVTVEAAGAVKTVKAXXXXXXXXXXXXXXXXXXXXXXXEAGAGMVNDGPLLSPRGRGYLARLVLEVCSEIEDSKKKAATEAKAKGGASTNTVTTRGDGITSRPRSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASERSSGMSMSMSSMSSLSSPSHGGSLPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFRLVGEPKTPAGGDGSALRRTSSGSS--IKVVRTGSAWDATPMKKIFTGGKQGKKAAAAAAATPHKNARETPLRTPRSGGAGGFFGAGDWLAAAFTPRGALAPDPESPRAPASEVPKQXXXXXXXXXXXXXVEQDEGIAPLAPSQPLASSRPPPEADALSFEGSTEEVLRYTIVAKSYLIRSKSKKHGESREASPIKSLFSPGGTERRVEEGGEEDVRHLTKELLDLKSRYMASTQHWLKTDIVNDEELRMIRAQVFEAIQRKRSELHTEAAAVLRAESRLEESLVIQHNGGSNSKSSRGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEEEANRTIAMLEGTAEFLKFSRLLLLLSEAISVSNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEILTAVARARGSGRKRR 3996
MAA VGTSCIPPPVSTGNPTAGTAADAGPEG V GGGDC+GFN V QQ PSAAANGVG AG AEVLR EAG XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX STPTA GRTLVSLQLKKEEL VLPPSACTTPAESPRNPD VMDAFRSP+ASPW AG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXX SVDAFCVSP SPRVSPRALMSSPVGIDGPARDGSFSLSSSPSSQRGAFAGSGRLEGSDWWKGLDLSPDR GLPRWRESRKP+A+ASSLPSD TE DGGGKT V MT+GA A GLHDG XXXXXXXXXXXXXXXXXX GVPGR EVSATEQAFQP+TVEGRLRQLEAENLRLRFRVADLEGQVSVMEDELDRRGVARPM ADANSSSN ESCRTG AGTAVVASA D SNA CRV VEA GA KTVKA XXXXXXX EAGAGMVNDGPLLSPRGRGYLARLVLEVCSEIEDSKK AATEAKAKGGASTNTV+TRG+GITSRPRSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASERSSGMSMSMSS LSSP+HGGSLPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFRL+GEPKTPA GDGSALRRTSSGSS IKVVRT S WDATPMKKI TGGKQGKKAAAAAAATPH+NARETPL+TPRSGGAGGFFGAGDWLAAAFTPRGALAPDPESPRAPASEVPKQXXXXXXXXXX VE+DEGIAPLAP+QP++S RPPPEADALSFEGSTEEVLRYTIVAKSYLIRSKSKKHGESREASPIKSLFSPGGTERRVEEGGEEDVRHLT+ELLDLKSRYMASTQHWLKTDIVNDEELRMIRAQVFEAIQRKRSELHTEAAAVLRAES LEESL +QH+GGSNSKSSRGC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EEEEANRTIAMLEGTAEFLKFSRLLLLLSEAISVSNSVT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PEILTAVARARGSGRKRR
Sbjct: 1 MAAVVGTSCIPPPVSTGNPTAGTAADAGPEGGGGPSTPSAAA-----------VNGGGDCNGFN--VKQQPPSAAANGVGTAGRGAEVLRREAGSSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE----STPTALGRTLVSLQLKKEELLPPPVLPPSACTTPAESPRNPDLVMDAFRSPSASPWPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRKSAWRPRXXXXXXXXXXSVDAFCVSPISPRVSPRALMSSPVGIDGPARDGSFSLSSSPSSQRGAFAGSGRLEGSDWWKGLDLSPDRCGLPRWRESRKPLAVASSLPSDIGTEKDGGGKT--AVGMTAGAAATGLHDGGDGVRGLVSPTSSSSARMSRSYMTLXXXXXXXXXXXXXXXXXX--GVPGRGAAEVSATEQAFQPLTVEGRLRQLEAENLRLRFRVADLEGQVSVMEDELDRRGVARPMIADANSSSNTESCRTGNAGTAVVASAGDNSNASPCRVKVEATGAAKTVKAAAAXXXXXXXSPKSRGVEGQGGGEAGAGMVNDGPLLSPRGRGYLARLVLEVCSEIEDSKK-AATEAKAKGGASTNTVSTRGEGITSRPRSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASERSSGMSMSMSS---LSSPAHGGSLPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFRLMGEPKTPARGDGSALRRTSSGSSGSIKVVRTASPWDATPMKKILTGGKQGKKAAAAAAATPHRNARETPLKTPRSGGAGGFFGAGDWLAAAFTPRGALAPDPESPRAPASEVPKQXXXXXXXXXX---VEKDEGIAPLAPAQPISSFRPPPEADALSFEGSTEEVLRYTIVAKSYLIRSKSKKHGESREASPIKSLFSPGGTERRVEEGGEEDVRHLTQELLDLKSRYMASTQHWLKTDIVNDEELRMIRAQVFEAIQRKRSELHTEAAAVLRAESVLEESLRLQHSGGSNSKSSRGCGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----EEEEANRTIAMLEGTAEFLKFSRLLLLLSEAISVSNSVTSTNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPGAAGA-PEILTAVARARGSGRKRR 1191
BLAST of mRNA_E-siliculosus-1a_M_contig9.17075.1 vs. uniprot
Match: D7G4K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K0_ECTSI) HSP 1 Score: 1035 bits (2675), Expect = 0.000e+0 Identity = 808/1003 (80.56%), Postives = 822/1003 (81.95%), Query Frame = 1
Query: 1012 MDAFRSPAASPWLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDAFCVSPFSPRVSPRALMSSPVGIDGPARDGSFSLSSSPSSQRGAFAGSGRLEGSDWWKGLDLSPDRSGLPRWRESRKPVAMASSLPSDNVTENDGGGKTKTTVEMTSGAVAAGLHDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGRATGEVSATEQAFQPVTVEGRLRQLEAENLRLRFRVADLEGQVSVMEDELDRRGVARPMPADANSSSNAESCRTGIAGTAVVASADDKSNA--CRVTVEAAGAVKTVKAXXXXXXXXXXXXXXXXXXXXXXXEAGAGMVNDGPLLSPRGRGYLARLVLEVCSEIEDSKKKAATEAKAKGGASTNTVTTR---GDGITSRPRSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASERSSGMSMSMSSMSSLSSPSHGGSLPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFRLVGEPKTPAGGDGSALRRTSSGSSIKVVRTGSAWDATPMKKIFTGGKQGKKAAAAAA---ATPHKNARETPLRTPRSGGAGGFFGAGDWLAAAFTPRGALAPDPESPRAPASEVPKQXXXXXXXXXXXXXVEQDEGIAPLAPSQPLASSRPPPEADALSFEGSTEEVLRYTIVAKSYLIRSKSKKHGESREASPIKSLFSPGGTERRVEEGGEEDVRHLTKELLDLKSRYMASTQHWLKTDIVNDEELRMIRAQVFEAIQRKRSELHTEAAAVLRAESRLEESLVIQHNGGSNSKSSRGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEEEANRTIAMLEGTAEFLKFSRLLLLLSEAISVSNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEILTAVARARGSGRKRR 3996
MDAFRSPAASPW AGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SVDAFCVSPFSPRVSPRALMSSPVGIDGPARDGSFSLSSSPSSQRGAFAGSGRLEGSDWWKGLDLSPDR GLPRWRESRKPVA AS LPSD+VTENDGGG+T VEMTS + AAG HDGXX XXXXXXXXXXXXXXXXXXXX GVPGRATGEVSATEQA QP+TVEGRLRQLEAENLRLRFRVADLEGQVSVMEDELDRRGVARPMPAD NSSSNAESCRTG AGTAVVASADDKSNA CRV VEA GA KTVKA XXXXXXXXX EAGAG+VNDGPLLSPRGRGYLARLVLEVCSEIEDSKK AATEAK G+GI SRPRSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASER SGM+MSMSS LSSP+HGGSLPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFRLVGEPKTPA GDGSALRRTSSGSSIKVVRT SAWDATPM K+FTGGK GKKA ATPHKNARETPLRTPRSGGAGGFFGAGDWLAAAFTPRGALAPDP+ RAP P++ PS P SYLIRSKSKKHGESREASPIKSLFSPGGTER+VEEGGEEDVRHLTKELLDLKSRYMASTQHWLKTDIVN EELRMIRAQVFEAIQRKRSELHTEAAAVLRAESRLEESL IQH+GGSNSKSSRGCXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX REEEEANRTIAML GTAEFLKFSRLLLLLSEAISVSNSVT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PEILTAVARARGSGRKRR
Sbjct: 1 MDAFRSPAASPWPAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGG---SVDAFCVSPFSPRVSPRALMSSPVGIDGPARDGSFSLSSSPSSQRGAFAGSGRLEGSDWWKGLDLSPDRCGLPRWRESRKPVATASFLPSDDVTENDGGGET--VVEMTSVSAAAGFHDGXXGVRGLLSPTRSSSARMSRSYMXXXXXXXXXXXXXXXXXXXX--GVPGRATGEVSATEQASQPLTVEGRLRQLEAENLRLRFRVADLEGQVSVMEDELDRRGVARPMPADPNSSSNAESCRTGNAGTAVVASADDKSNASACRVKVEATGAAKTVKAAXXXXXXXXXPKSRGVEGEGGG-EAGAGIVNDGPLLSPRGRGYLARLVLEVCSEIEDSKK-AATEAKXXXXXXXXXXXXXXXXGEGIASRPRSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASERGSGMAMSMSS---LSSPAHGGSLPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFRLVGEPKTPARGDGSALRRTSSGSSIKVVRTASAWDATPMIKMFTGGKPGKKAXXXXXXXXATPHKNARETPLRTPRSGGAGGFFGAGDWLAAAFTPRGALAPDPD--RAP----PRRFFG--------------------TPSLP------------------------------SYLIRSKSKKHGESREASPIKSLFSPGGTERKVEEGGEEDVRHLTKELLDLKSRYMASTQHWLKTDIVNHEELRMIRAQVFEAIQRKRSELHTEAAAVLRAESRLEESLRIQHSGGSNSKSSRGCXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSGKDEXXXXXXXXXXXXXL----REEEEANRTIAMLAGTAEFLKFSRLLLLLSEAISVSNSVTSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPGAAGVPEILTAVARARGSGRKRR 931 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.17075.1 >prot_E-siliculosus-1a_M_contig9.17075.1 ID=prot_E-siliculosus-1a_M_contig9.17075.1|Name=mRNA_E-siliculosus-1a_M_contig9.17075.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1219bp MAAAVGTSCIPPPVSTGNPTAGTAADAGPEGGGGPSTPSAAAAAAAATAAback to top mRNA from alignment at E-siliculosus-1a_M_contig9:1757530..1774472+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.17075.1 ID=mRNA_E-siliculosus-1a_M_contig9.17075.1|Name=mRNA_E-siliculosus-1a_M_contig9.17075.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=16943bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1757530..1774472+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:1757530..1774472+ >mRNA_E-siliculosus-1a_M_contig9.17075.1 ID=mRNA_E-siliculosus-1a_M_contig9.17075.1|Name=mRNA_E-siliculosus-1a_M_contig9.17075.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=7314bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1757530..1774472+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |