prot_E-siliculosus-1a_M_contig88.16799.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig88.16799.1
Unique Nameprot_E-siliculosus-1a_M_contig88.16799.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length169
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig88.16799.1 vs. uniprot
Match: D7G276_ECTSI (Mitochondrial import inner membrane translocase subunit TIM23 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G276_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 3.540e-115
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
Query:    1 MYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLGQGIIF 168
            MYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLGQGIIF
Sbjct:   39 MYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLGQGIIF 206          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16799.1 vs. uniprot
Match: A0A7S1XNQ0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNQ0_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.580e-41
Identity = 76/166 (45.78%), Postives = 109/166 (65.66%), Query Frame = 0
Query:    3 GGAAQGK--EPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLGQGI 166
            GG + G   EPEYLDY IK RG  E +    G  Y+ G++GGG  G+ EG   +P+ R R+L NSIMN+AGK+GS  GN F  +A +Y+    L D + VD      Q G+G+ +NP+L+GASTGLLYKS+AGPR A++A+V G G +G ++ V++  +++LG  +
Sbjct:   29 GGLSTGSRYEPEYLDYTIKSRGPLENVFSYCGTAYLAGVIGGGGVGLMEGVRSSPSSRFRILFNSIMNNAGKRGSRAGNAFGCVALFYSGFLALYDGYNVDM-----QLGVGDWVNPVLSGASTGLLYKSTAGPRAAILAAVLGGGVIGASFGVEEVVSNMLGYRV 189          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16799.1 vs. uniprot
Match: A0A4D9D4E0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4E0_9STRA)

HSP 1 Score: 135 bits (340), Expect = 4.230e-37
Identity = 77/154 (50.00%), Postives = 104/154 (67.53%), Query Frame = 0
Query:    1 MYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAV 154
            +YG A++ +EP+YLDY+IKGRG  ERM   +G+ Y+TGIL GG  G R G+  AP+ R  + LNS+MN AGK GS +GN   V A  Y+ +E+LLDHFE D++    QA     +NP+L+GA +GLLYKS+A PR A +ASV G    G+ Y +
Sbjct:   36 LYGVASE-EEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGILGGRTGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFETDKVLGGHQA-----VNPVLSGAISGLLYKSTAAPRTAALASVLGGFGAGMFYVI 183          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16799.1 vs. uniprot
Match: W7TXH2_9STRA (Mitochondrial import inner membrane translocase subunit tim23 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXH2_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.760e-36
Identity = 77/154 (50.00%), Postives = 104/154 (67.53%), Query Frame = 0
Query:    1 MYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAV 154
            +YG A++ +EP+YLDY+IKGRG  ERM   +G+ Y+TGIL GG  G R G+  AP+ R  + LNS+MN AGK GS +GN   V A  Y+ +E+LLDHFE D++    QA     +NP+L+GA +GLLYKS+A PR A +ASV G    G+ Y +
Sbjct:  102 LYGVASE-EEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGILGGRRGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFETDKVLGGHQA-----VNPVLSGAISGLLYKSTAAPRTAALASVLGGFGAGMFYVI 249          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16799.1 vs. uniprot
Match: A0A7S0AZQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AZQ3_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.160e-32
Identity = 66/148 (44.59%), Postives = 93/148 (62.84%), Query Frame = 0
Query:    9 KEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMG-PVQQAGLGEI-INPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAV 154
            ++P+YLDY+ KGRG    M  N G  Y+ GI+ GG  G+REG    P+ R +V LNS++NH G+ GS+ GN   V +  Y+  E L DH+++DQ   PV    +GE+  +P  A   TG+ YK++AGPR+A +A   GLGAVG  YA+
Sbjct:   54 QQPDYLDYDTKGRGVVVTMFANTGVSYLLGIVAGGVYGLREGLLHTPSSRFKVKLNSVLNHCGRHGSWAGNVLGVASIMYSLFEGLADHYDLDQYTRPV----VGEVPASPAFAALMTGVTYKATAGPRVAALAGTIGLGAVGATYAL 197          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16799.1 vs. uniprot
Match: A0A835Z638_9STRA (Mitochondrial import inner membrane translocase subunit TIM23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z638_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.480e-32
Identity = 71/164 (43.29%), Postives = 97/164 (59.15%), Query Frame = 0
Query:    1 MYGGAAQGK-EPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLG 163
            MYG    G  EP+YLDYNIKGR  +E+  YN G  Y+ GI+GGG  GV EG   AP+ R+R+ +N+I+N AGK+GS  GNT AVLA +YT  E + D  EVD      + G  E ++P+LAG++   L+ +    R   +A VAG   +G  Y       S++G
Sbjct:   44 MYGVQGGGAYEPDYLDYNIKGRDTFEKTTYNTGMCYLAGIIGGGGYGVLEGARTAPSSRARIRVNAILNAAGKRGSRAGNTLAVLAMFYTGFEFMFDSLEVDA-----KVGDAEWLHPVLAGSAAMTLFYTGKNVRTMALAGVAGGAGMGALYLGTTALGSLIG 202          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16799.1 vs. uniprot
Match: A0A7S2A828_TRICV (Hypothetical protein n=3 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A828_TRICV)

HSP 1 Score: 125 bits (314), Expect = 6.780e-32
Identity = 69/146 (47.26%), Postives = 88/146 (60.27%), Query Frame = 0
Query:   10 EPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQM-GPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAV 154
            +P+YLDY+ KGRG    M  NAG  Y+ GI GGG  G+REG  + P+ R +V LNS++NH G+ GS  GN   VL+  Y+  E L DH+EV+   GP+Q A      +  LA   TG  Y S AGPR+A +A   GLG VGV Y V
Sbjct:  161 QPDYLDYDTKGRGVVVTMFANAGVSYLMGIFGGGLYGLREGLTQTPSSRFKVKLNSVLNHCGRHGSRAGNVLGVLSVMYSLYEGLADHYEVENYTGPIQPA------SQPLAAFLTGATYYSRAGPRVAALAGTIGLGTVGVTYGV 300          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16799.1 vs. uniprot
Match: A0A7S1VVP8_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VVP8_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.360e-30
Identity = 65/141 (46.10%), Postives = 90/141 (63.83%), Query Frame = 0
Query:    9 KEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQM-GPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAV 148
            ++P+YLDY+ KGRG    M  NAG  Y+ G   GGA G+REGF  +P++R RV LNSI+NH G+ GS +GN+  V++  Y+  E   D+FE+D+  GPVQ A  G      +A   TG  + +SAGPR+A +A   G+GAV
Sbjct:   40 QQPDYLDYDQKGRGIVVTMFANAGMSYLLGTFAGGAYGLREGFIHSPSQRFRVKLNSILNHCGRHGSRWGNSLGVVSILYSIYEGTADNFEIDRYSGPVQPAAPG------VAAFLTGATFYASAGPRVAALAGTIGVGAV 174          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16799.1 vs. uniprot
Match: A0A6U3NTN9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NTN9_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.610e-29
Identity = 67/146 (45.89%), Postives = 87/146 (59.59%), Query Frame = 0
Query:    9 KEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQM-GPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYA 153
            ++P+YL+Y+ KGRG    M  N G  Y+ GI  GG  G+REG A  P+ R +V +NS++NH GK GS  GNT  VL+  Y+  E   D  EV+Q  GP+Q         P LA   TG+ Y S +GPR+A +A   GLGAVGV YA
Sbjct:   42 EQPDYLEYDQKGRGVVVTMFANTGMSYLLGIGFGGVYGLREGLANTPSSRFKVKVNSVLNHCGKHGSRLGNTLGVLSIMYSLYEWAGDQLEVEQYTGPIQP------FTPALATFMTGVTYYSRSGPRVAGLAGTIGLGAVGVTYA 181          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16799.1 vs. uniprot
Match: A0A6S8GC44_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8GC44_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.990e-29
Identity = 60/143 (41.96%), Postives = 87/143 (60.84%), Query Frame = 0
Query:    7 QGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQ-MGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAV 148
            QG  PEYL Y+ KGRG+ E+  YN G +Y+ GI+GGG  G  EG   +P+ + ++ LN+++N  G++GS  GN    LA  Y+  + L   FE+D  +G       G  +NPLLA  +TGL+YKS+ GP+   +A+V G G V
Sbjct:   48 QGNGPEYLQYDTKGRGYTEKTFYNCGTMYLLGIVGGGTYGFFEGLRSSPSNKFKIRLNTVLNKCGRRGSRAGNALGALALMYSLFDALAGTFEIDHYLG-------GYDVNPLLAATATGLVYKSTHGPKTMALAAVIGGGLV 183          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G276_ECTSI3.540e-115100.00Mitochondrial import inner membrane translocase su... [more]
A0A7S1XNQ0_9STRA2.580e-4145.78Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A4D9D4E0_9STRA4.230e-3750.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TXH2_9STRA1.760e-3650.00Mitochondrial import inner membrane translocase su... [more]
A0A7S0AZQ3_9STRA1.160e-3244.59Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A835Z638_9STRA1.480e-3243.29Mitochondrial import inner membrane translocase su... [more]
A0A7S2A828_TRICV6.780e-3247.26Hypothetical protein n=3 Tax=Trieres chinensis Tax... [more]
A0A7S1VVP8_9STRA1.360e-3046.10Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A6U3NTN9_9STRA1.610e-2945.89Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6S8GC44_9STRA1.990e-2941.96Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 29..144
e-value: 1.0E-14
score: 54.9
NoneNo IPR availablePANTHERPTHR15371TIM23coord: 17..153
NoneNo IPR availablePANTHERPTHR15371:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-RELATEDcoord: 17..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 155..168
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..154
NoneNo IPR availableTMHMMTMhelixcoord: 30..52
NoneNo IPR availableTMHMMTMhelixcoord: 132..154
NoneNo IPR availableTMHMMTMhelixcoord: 73..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig88contigE-siliculosus-1a_M_contig88:129673..132889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig88.16799.1mRNA_E-siliculosus-1a_M_contig88.16799.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig88 129565..133741 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig88.16799.1 ID=prot_E-siliculosus-1a_M_contig88.16799.1|Name=mRNA_E-siliculosus-1a_M_contig88.16799.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=169bp
MYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREG
FAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEV
DQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGV
AYAVDKTSASVLGQGIIF*
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