mRNA_E-siliculosus-1a_M_contig88.16795.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig88.16795.1 vs. uniprot
Match: D7G279_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G279_ECTSI) HSP 1 Score: 454 bits (1167), Expect = 2.050e-155 Identity = 230/234 (98.29%), Postives = 230/234 (98.29%), Query Frame = 1
Query: 415 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKAKALEVPSGKPEVSPAKRSDPQAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIG 1116
MKFGKNIGRVVELSDPEWSPFWINYKFLKKK KALEVPSGKPEVSPAKRSDPQAMARSAGEVEFYRLLRQEL KCSEFFTGVEGQL VRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVV NAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIG
Sbjct: 1 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKALEVPSGKPEVSPAKRSDPQAMARSAGEVEFYRLLRQELRKCSEFFTGVEGQLGVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIG 234
BLAST of mRNA_E-siliculosus-1a_M_contig88.16795.1 vs. uniprot
Match: A0A6H5L5H8_9PHAE (SPX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H8_9PHAE) HSP 1 Score: 340 bits (873), Expect = 2.610e-111 Identity = 170/174 (97.70%), Postives = 172/174 (98.85%), Query Frame = 1
Query: 685 ARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIGLNTPEFSHKREGFSGKPSAMTPQGPVRAAT 1206
ARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIGLNTPEFSHKR+GFSGKPSAM P+GPVRA T
Sbjct: 11 ARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIGLNTPEFSHKRDGFSGKPSAMIPKGPVRATT 184
BLAST of mRNA_E-siliculosus-1a_M_contig88.16795.1 vs. uniprot
Match: A0A835Z5J1_9STRA (SPX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J1_9STRA) HSP 1 Score: 241 bits (616), Expect = 3.280e-73 Identity = 134/223 (60.09%), Postives = 158/223 (70.85%), Query Frame = 1
Query: 415 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKAKALE---VPS--GKPEVSPAKR-SDPQAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLL-LPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVN-NAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTM 1059
MKFGKN+ RVVELSDPEWSPFW+NYK LKK K ++ PS G P P S P+A+++SAGEV F++ LRQEL KC EFF E Q VR+ARV EGWRQL +P V V+G KRLMAACV+LYKDLLLLENFAIMNY FSKILKKHDKLTGF TRE +MKNVVN F YP+V++ML VE LF+ I++ + + + EEQLFID M
Sbjct: 1 MKFGKNLERVVELSDPEWSPFWLNYKHLKKMLKEVQHTPAPSAAGAPIAKPPNGLSSPEALSKSAGEVAFFKFLRQELRKCKEFFASAESQFLVRRARVREGWRQLTAVPEVPVDGEQYKRLMAACVRLYKDLLLLENFAIMNYTAFSKILKKHDKLTGFCTRERYMKNVVNMTTSFTHYPRVLEMLEDVEELFRGIQTHANIAHSS-------EEQLFIDAM 216
BLAST of mRNA_E-siliculosus-1a_M_contig88.16795.1 vs. uniprot
Match: A0A4D9D3X8_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3X8_9STRA) HSP 1 Score: 208 bits (530), Expect = 4.110e-59 Identity = 116/273 (42.49%), Postives = 164/273 (60.07%), Query Frame = 1
Query: 415 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKAKAL-----------EVPSGKPEVSPAKRSDP--QAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQ-LFIDTMLTINTEAFRLQQAEGADIG-LNTPEFSHKREGFSGKPSAMTPQG 1188
MKFGK + +VV LSDPEW+PFW++YK LKK+ K L + S + P+ ++P + +A+SAGEV F+R LR E+ K SEF+ G+E Q+ R+ R+ G + L P V+E + ++ AC+ LYKDLLLLENFA+MNYC SK LKKHDK TR FM+NVVN PF YP++++ML +E +FK I++L A PL EE+ LF++ + +N EA +Q+ E AD+G +T + H + A T G
Sbjct: 1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSVNQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKAR-----PLEEEERLFLEAIRGLNQEASSMQREEKADLGGASTSDPEHSADDQPAARDAATAAG 268
BLAST of mRNA_E-siliculosus-1a_M_contig88.16795.1 vs. uniprot
Match: W7TGL0_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGL0_9STRA) HSP 1 Score: 208 bits (529), Expect = 6.850e-58 Identity = 116/273 (42.49%), Postives = 164/273 (60.07%), Query Frame = 1
Query: 415 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKAKAL-----------EVPSGKPEVSPAKRSDP--QAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQ-LFIDTMLTINTEAFRLQQAEGADIG-LNTPEFSHKREGFSGKPSAMTPQG 1188
MKFGK + +VV LSDPEW+PFW++YK LKK+ K L + S + P+ ++P + +A+SAGEV F+R LR E+ K SEF+ G+E Q+ R+ R+ G + L P V+E + ++ AC+ LYKDLLLLENFA+MNYC SK LKKHDK TR FM+NVVN PF YP++++ML +E +FK I++L A PL EE+ LF++ + +N EA +Q+ E AD+G +T + H + A T G
Sbjct: 1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSINQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKAR-----PLEEEERLFLEAIRGLNQEASSMQREEKADLGGASTSDPEHSADDQPAARDAATAAG 268
BLAST of mRNA_E-siliculosus-1a_M_contig88.16795.1 vs. uniprot
Match: A0A7R9YCT0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCT0_9STRA) HSP 1 Score: 179 bits (455), Expect = 5.700e-48 Identity = 117/290 (40.34%), Postives = 158/290 (54.48%), Query Frame = 1
Query: 415 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKAKALEVPSGKPEVSPAKRSDPQ-AMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLP---------------------------NVVVEGNPNKR-LMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIES--------LPS----ASAEAGTR---------------VPLREE-QLFIDTMLTINTEAFRLQQAEGADI 1113
MKF KN+ VV+LS PEW+PFW++YK LKK+ K + + + SP KR + A+A A E++F+ L EL K EF+ G E + +R +RV EG RQLL P V NP +R ++ACV++YKDLLLLE +AIM+YC FSKILKKHDK+TG+ TR +M VVN PF +Y V+KML E+LFK + + LPS + +AG R +PL EE QLFID + +N EA L + E ++
Sbjct: 1 MKFCKNLLEVVDLSHPEWAPFWMDYKTLKKRLKDMSA-AKRSGASPKKRGRREVAIAEDALEIQFFSHLMAELRKTEEFYKGAETEFRIRISRVREGVRQLLEPAYRPVEPETSTDDSDSADASHAPVAGGEAVAPENPKRRRALSACVRIYKDLLLLETYAIMSYCAFSKILKKHDKVTGYTTRTQYMSRVVNPKPFTKYKGVVKMLRDCESLFKILTTQTEGPDAELPSPRRRTNKQAGARDALSLSDWSDEMRSKLPLHEEEQLFIDVIRNLNNEATSLMRDEQKEV 289
BLAST of mRNA_E-siliculosus-1a_M_contig88.16795.1 vs. uniprot
Match: A0A7S2D364_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D364_9STRA) HSP 1 Score: 170 bits (430), Expect = 4.850e-45 Identity = 96/246 (39.02%), Postives = 149/246 (60.57%), Query Frame = 1
Query: 415 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKAKALEV------------PSGKPEVSPAKRSDPQAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFV-QYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLR-EEQLFIDTMLTINTEAFRLQQAEGAD 1110
MKF K + +VV SDPEW+P ++NYK+LKK+ A+++ +G S + +++ S GE +F++ L EL K SEFF E Q+ +R AR+ EG RQL V N ++ +MAAC+KLYKDLL+LEN+AI+N+CGFSKILKKHDK TGF TR+ FM N V+ + +Y + +++ E LF I + + T++ L+ +E++ I+++L + +A R +++ D
Sbjct: 1 MKFAKTLQQVVSTSDPEWAPLFMNYKYLKKRINAIKIMNNTYSNSLPQADAGIENSSSPHETSKRSITESIGERDFFKALHAELRKSSEFFRAAEQQMVIRIARIKEGARQLRETFTVTHENLDQMIMAACLKLYKDLLMLENYAIINFCGFSKILKKHDKNTGFVTRDRFMNNTVSRHEHLCKYEVLKRIIKETEDLFVEISKI----SHTNTKLSLQTDERISIESILNLKFQAIRFKKSVCGD 242
BLAST of mRNA_E-siliculosus-1a_M_contig88.16795.1 vs. uniprot
Match: A0A7S1XNX0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNX0_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.150e-44 Identity = 108/287 (37.63%), Postives = 149/287 (51.92%), Query Frame = 1
Query: 415 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKAKALEVPSGKPEVSPAKRSDPQAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQL-------------LLPNVV-VEGNP--------------NKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKN----IESLPSASAEAGTRVPL----------------------REEQLFIDTMLTINTEAFRLQQAEGADI 1113
MKFGKN+ VV +S+PEW+PFWI+YK LKK+ K + + + A++ A+A A E+ F+R L EL +F+ E + +R RV+ G RQ+ P VEG +R + +C+++YKDLLLLEN+A+M+YCGFSKILKKHDK+TG+RTR +M+ VVN PF +Y V KML E LF+ +E P +AGT P EE LFID + IN EA L + E A++
Sbjct: 1 MKFGKNLLEVVAMSNPEWAPFWIDYKMLKKRLKDMAPDAAAGKQQGAQQQPRGAIASDAKEIAFFRHLMAELNHTVDFYKSAEAEFRIRIWRVHAGLRQITEAGSPRATSPVPFAPGAATVEGGDAEGQAPPCEWQCAMKRRALTSCLRIYKDLLLLENYAVMSYCGFSKILKKHDKVTGYRTRAQYMRRVVNPKPFCKYQGVAKMLHECEDLFRRLAAPVEPGPGGG-DAGTAAPNGGSEGLPISDWSDDRRKKFALHEEEHLFIDAIRNINKEASTLARDERAEV 286
BLAST of mRNA_E-siliculosus-1a_M_contig88.16795.1 vs. uniprot
Match: A0A7S2SN02_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN02_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.770e-44 Identity = 109/286 (38.11%), Postives = 147/286 (51.40%), Query Frame = 1
Query: 415 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKAKALEV------PSGKPEVSPAKRS-----------------DPQAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESL-PSASAEAGTRV-PLREEQLFIDTMLTINTEAFRLQQAEGADIGLNTPEFSHKREGFSGKPSAMTPQGPVR 1197
MKFGK + RV +SDPEW+PFW+NYK+LKKK +E P P+ S DP + SAGE+ F++ ++ EL K + FF E +L R RV EG RQ+ N V + RLM ACV LYKDL++LEN+A+M + FSKILKKHDK T + TR FM VN+ PFV+Y ++ ML V LF+ ++ L P A A G LRE + ML + + + +D G G +G+ A +G VR
Sbjct: 20 MKFGKKLLRVQSMSDPEWAPFWVNYKYLKKKINEIETLRSVAQPEAHNSAVPSSASISVNAADAAANVRTEPLDPDTIKESAGEIAFFKAVQTELVKSATFFVSAEQELHERWKRVCEGMRQIGDRNYTVLDDATPRLMRACVSLYKDLIMLENYAVMTHSAFSKILKKHDKRTRYATRVKFMSRRVNHQPFVRYIQLKTMLDRVADLFRQVQKLIPDADAAYGDSTGSLREIKELHREMLVVGAD-----EVGQSDTG-----------GLAGEDEAAVERGSVR 289
BLAST of mRNA_E-siliculosus-1a_M_contig88.16795.1 vs. uniprot
Match: A0A8J2SU39_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU39_9STRA) HSP 1 Score: 167 bits (423), Expect = 4.320e-44 Identity = 96/194 (49.48%), Postives = 129/194 (66.49%), Query Frame = 1
Query: 415 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKAKALEV-PSGKPEVSPAKRSDPQ--AMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVV--VEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNI 981
MKFG ++ RVV +SD EW+P+++ YK LKK K ++ PS P +R D + MA+SA EV F+R LR EL K ++FF E LEVR+ RV E RQL + + +E P+ R + ACV Y+DLLLLEN+AIMNYCGFSKILKKHDK TGF TR FM+ V PF +YP++++M+ E L+++I
Sbjct: 1 MKFGHDMHRVVRVSDAEWAPYFMQYKLLKKCIKQIKADPSSPPVAECCERGDCEKATMAKSAPEVAFFRALRFELQKSAQFFRQAELVLEVRRERVREALRQLQDEDRLGLLEDAPD-RALRACVTYYRDLLLLENYAIMNYCGFSKILKKHDKQTGFTTRTQFMRVCVAPQPFTRYPRLMEMIREAEDLYRDI 193 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig88.16795.1 >prot_E-siliculosus-1a_M_contig88.16795.1 ID=prot_E-siliculosus-1a_M_contig88.16795.1|Name=mRNA_E-siliculosus-1a_M_contig88.16795.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=533bp CTRIKHSHTAPTAAACSARFRSLSPTTHNTFAFAHTIESCVIQPSCHLHGback to top mRNA from alignment at E-siliculosus-1a_M_contig88:54113..62216- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig88.16795.1 ID=mRNA_E-siliculosus-1a_M_contig88.16795.1|Name=mRNA_E-siliculosus-1a_M_contig88.16795.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8104bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig88:54113..62216- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig88:54113..62216- >mRNA_E-siliculosus-1a_M_contig88.16795.1 ID=mRNA_E-siliculosus-1a_M_contig88.16795.1|Name=mRNA_E-siliculosus-1a_M_contig88.16795.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3198bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig88:54113..62216- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |