prot_E-siliculosus-1a_M_contig87.16712.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig87.16712.1
Unique Nameprot_E-siliculosus-1a_M_contig87.16712.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length1043
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16712.1 vs. uniprot
Match: A0A6H5L3B9_9PHAE (GRIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3B9_9PHAE)

HSP 1 Score: 1504 bits (3895), Expect = 0.000e+0
Identity = 889/1042 (85.32%), Postives = 916/1042 (87.91%), Query Frame = 0 
Query:    1 MFSGFDNFAEGFKRFSLDALQDQDDENTSKDEQQRLPAVPEQRHPTEHTESPTKEPPPQXAEXXXXXXXXXXDNAGATDAQREGVGGLQQKYWAHLQNSPQATSVAPAGTSPAAVASPSEFDLSTFDGQAGGVVVEAEEPLRENVGTQAAEEGMDEQREGQMFGGEKNISGPSTLARDSSAPLSSIEKGFSDNTDTPAALGRSEPCSRTIEDGTEDVHLGNAPTPNPSSSGKLQNCLEGSKPAAAKAVGLATDEGVATNTTDXXXXXXXXXXXXXXERRVDHHENGESIEAGSSPQKSPEAATAGAAGTAEVEPAEDTTTADPLTVVAMRQELSLVKNAASGLEGALRESRSEVQLLRELLATEQDTTRKLSDEVNATRMGFQESNAAHQRTAKQSHALEEELYNARTVVESLRAESAALKTKVDEGVEDRHALEGKLRHLQAGLTEGQEAARQEGRQEVERLEARIRDLLKDRDRKQAELDLQNARRKETREMARDLESQLAAVERIAQEREVELSKQRDDMVALKKNTGEATDQKKTWATKYEALERNFKQVRAQSKRIESELXXXXXXXXXXXXXKAVLEERVEVEGAERVTVVASVSQERDFLLRQASISAQKTVDRLEQEVVELRRSQEAQATAAAARAQTTGVLEEYRTRAQQALKRANEITSQTASENKRLEAEMSKLSDEVAQQRPLWEQSKQLEEVHRAEVAELKEKIANQATELGNKATAAAALEAQVSEKEEXRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENRQRRKHSPEKVDVNADVGKNLSSPTPAVSSLSMGWDEEKHGSRNGTPRRGMGTEATGAAWPERRSLGESVSSMPSEADSADVAQGSVGEQLFYVHQLRERMSKEQIEMRSLISELEASRAAADAQAAKQAQLEKQLEAALLDKKRLQDLDSGRNAAINLEYLKNCVVGALRTSEPSEHARLLPVITTILKLSEDEAAVIAKNISTRAQHQGSFGGSLPPGGDARXXXXXXXXXXXXSSNPQQK 1042
            MFSGFDNFAEGFKRFSLDALQDQD ENTSKDEQQRLPA+PEQ+HP EHTESPTKEPPPQ AE           +AGAT+AQR+GVGGL+QK+ AH++NSP ATSVAPAG SPAAVASPSE D STFD QAGGVVVEAEE LREN GTQAA+EGM+E+REGQMFGGE N SGPSTLARDSSAP SS+E+GFSDNTDTPAALGRSEPC  TI+DGTED+HLGNAPTP+PSSSGKLQ+ LEGSKPAAAKA+GLA DEGVATNTT+              ERRVDH EN E I+ GSSPQKSPEAATAGAAGTA V+PAEDTTTADPLTVVAMRQELSLVKNAASGLEGALRESRSEVQLLRELLATEQDTTRKLSDEVNATRMGFQESNAAHQRTA+QSHALEEELYNART+VESLRAESAALK KVDEGVEDRHALEGKLRHLQAG+TEGQEAARQEGRQEVERLEARIRDLLKDRDRKQAELDLQNARRKETREMARDLESQLAAVERIAQEREVELSKQRDDMVALKKNTGEATDQKKTWATKYEALERNFKQVRAQS RIESEL             KAVLEERVEVEGAERVTVVASVSQERDFLLRQA       VDRLEQEVVELRRSQEAQATAAAARAQTTGVLEEYRTRAQQALKRANEITSQTASENKRL+AEM KLSDEVAQQRPLWEQSKQLEEVHRAEVAELKEKIANQATELGN A AAAALEAQV EKEE RR                                                   ENRQRRKHSPEKVDVNAD+GKNLSSPTPAVSSLSMGWDEEKHGSRNGTPRRGMGTEATGAAWPERRSLGESVSSMPSEADSADVAQGSVGEQLFYVHQLRERMSKEQIEMRSLISELEASRAAADAQAAKQAQLEKQLEAALLDKKRLQDLDSGRNAAINLEYLKNCVVGALRTSEPSEHARLLPVITTILKLSEDEAAVIAKNISTRAQHQGSFGGSLPPGGDARXXXXXXXXXXXXSSNPQQK
Sbjct:    1 MFSGFDNFAEGFKRFSLDALQDQD-ENTSKDEQQRLPALPEQQHPMEHTESPTKEPPPQLAEVEDNEWDWDHGHAGATNAQRDGVGGLRQKHGAHVRNSPHATSVAPAGISPAAVASPSELDQSTFDEQAGGVVVEAEEALRENAGTQAAKEGMEERREGQMFGGETN-SGPSTLARDSSAPSSSVEEGFSDNTDTPAALGRSEPCIGTIQDGTEDIHLGNAPTPDPSSSGKLQDFLEGSKPAAAKAIGLAIDEGVATNTTNDSSAEGPTDTNWGGERRVDHQENAERIQDGSSPQKSPEAATAGAAGTAVVKPAEDTTTADPLTVVAMRQELSLVKNAASGLEGALRESRSEVQLLRELLATEQDTTRKLSDEVNATRMGFQESNAAHQRTAEQSHALEEELYNARTLVESLRAESAALKAKVDEGVEDRHALEGKLRHLQAGVTEGQEAARQEGRQEVERLEARIRDLLKDRDRKQAELDLQNARRKETREMARDLESQLAAVERIAQEREVELSKQRDDMVALKKNTGEATDQKKTWATKYEALERNFKQVRAQSIRIESELEEAREHATRIEAEKAVLEERVEVEGAERVTVVASVSQERDFLLRQAI-----AVDRLEQEVVELRRSQEAQATAAAARAQTTGVLEEYRTRAQQALKRANEITSQTASENKRLKAEMRKLSDEVAQQRPLWEQSKQLEEVHRAEVAELKEKIANQATELGNMAAAAAALEAQVLEKEEERRDAHTSVMRLEAQGKSLKQELQRQQKALAAAQENEVTLQTRLADQEAALQAAENRQRRKHSPEKVDVNADMGKNLSSPTPAVSSLSMGWDEEKHGSRNGTPRRGMGTEATGAAWPERRSLGESVSSMPSEADSADVAQGSVGEQLFYVHQLRERMSKEQIEMRSLISELEASRAAADAQAAKQAQLEKQLEAALLDKKRLQDLDSGRNAAINLEYLKNCVVGALRTSEPSEHARLLPVITTILKLSEDEAAVIAKNISTRAQHQGSFGGSLPPGGDARXXXXXXXXXXXXSSNPQQK 1035
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L3B9_9PHAE0.000e+085.32GRIP domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 537..585
NoneNo IPR availableCOILSCoilCoilcoord: 703..800
NoneNo IPR availableCOILSCoilCoilcoord: 893..913
NoneNo IPR availableCOILSCoilCoilcoord: 612..639
NoneNo IPR availableCOILSCoilCoilcoord: 650..688
NoneNo IPR availableCOILSCoilCoilcoord: 928..948
NoneNo IPR availableCOILSCoilCoilcoord: 446..515
IPR000237GRIP domainSMARTSM007551gripcoord: 954..1001
e-value: 7.1E-8
score: 42.2
IPR000237GRIP domainPFAMPF01465GRIPcoord: 956..996
e-value: 3.7E-12
score: 45.9
IPR000237GRIP domainPROSITEPS50913GRIPcoord: 951..1001
score: 11.061

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig87contigE-siliculosus-1a_M_contig87:86940..93758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig87.16712.1mRNA_E-siliculosus-1a_M_contig87.16712.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig87 86440..93758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig87.16712.1 ID=prot_E-siliculosus-1a_M_contig87.16712.1|Name=mRNA_E-siliculosus-1a_M_contig87.16712.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1043bp
MFSGFDNFAEGFKRFSLDALQDQDDENTSKDEQQRLPAVPEQRHPTEHTE
SPTKEPPPQPAEVEDNEWDWDQDNAGATDAQREGVGGLQQKYWAHLQNSP
QATSVAPAGTSPAAVASPSEFDLSTFDGQAGGVVVEAEEPLRENVGTQAA
EEGMDEQREGQMFGGEKNISGPSTLARDSSAPLSSIEKGFSDNTDTPAAL
GRSEPCSRTIEDGTEDVHLGNAPTPNPSSSGKLQNCLEGSKPAAAKAVGL
ATDEGVATNTTDDSSAAGSTGTNGGGERRVDHHENGESIEAGSSPQKSPE
AATAGAAGTAEVEPAEDTTTADPLTVVAMRQELSLVKNAASGLEGALRES
RSEVQLLRELLATEQDTTRKLSDEVNATRMGFQESNAAHQRTAKQSHALE
EELYNARTVVESLRAESAALKTKVDEGVEDRHALEGKLRHLQAGLTEGQE
AARQEGRQEVERLEARIRDLLKDRDRKQAELDLQNARRKETREMARDLES
QLAAVERIAQEREVELSKQRDDMVALKKNTGEATDQKKTWATKYEALERN
FKQVRAQSKRIESELEEARENATRIEAEKAVLEERVEVEGAERVTVVASV
SQERDFLLRQASISAQKTVDRLEQEVVELRRSQEAQATAAAARAQTTGVL
EEYRTRAQQALKRANEITSQTASENKRLEAEMSKLSDEVAQQRPLWEQSK
QLEEVHRAEVAELKEKIANQATELGNKATAAAALEAQVSEKEEERRDAHT
SVMRLEAQGKSLKQELQRQQKALAAAQENEATLQTRLADQEAALQAAENR
QRRKHSPEKVDVNADVGKNLSSPTPAVSSLSMGWDEEKHGSRNGTPRRGM
GTEATGAAWPERRSLGESVSSMPSEADSADVAQGSVGEQLFYVHQLRERM
SKEQIEMRSLISELEASRAAADAQAAKQAQLEKQLEAALLDKKRLQDLDS
GRNAAINLEYLKNCVVGALRTSEPSEHARLLPVITTILKLSEDEAAVIAK
NISTRAQHQGSFGGSLPPGGDARASSSSSSSRSWWSSNPQQK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000237GRIP_dom