prot_E-siliculosus-1a_M_contig869.16704.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig869.16704.1
Unique Nameprot_E-siliculosus-1a_M_contig869.16704.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length37
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig869.16704.1 vs. uniprot
Match: D1J7D1_ECTSI (Photosystem I reaction center subunit VIII n=51 Tax=Phaeophyceae TaxID=2870 RepID=D1J7D1_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 3.360e-15
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
Query:    1 MLINYLPSILVPLVGLVFPAVAMGLLFIYIEKDTIE 36
            MLINYLPSILVPLVGLVFPAVAMGLLFIYIEKDTIE
Sbjct:    1 MLINYLPSILVPLVGLVFPAVAMGLLFIYIEKDTIE 36          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16704.1 vs. uniprot
Match: A0A8E5XRH6_9PHAE (Photosystem I reaction center subunit VIII n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRH6_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 4.620e-13
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    1 MLINYLPSILVPLVGLVFPAVAMGLLFIYIEKDTIE 36
            M ++YLPSILVPLVGLVFPAVAMGLLF+YIEKDTIE
Sbjct:    1 MSLSYLPSILVPLVGLVFPAVAMGLLFVYIEKDTIE 36          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16704.1 vs. uniprot
Match: A0A8F0F7C5_9PHAE (Photosystem I reaction center subunit VIII n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7C5_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 6.570e-13
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 0
Query:    1 MLINYLPSILVPLVGLVFPAVAMGLLFIYIEKDTIE 36
            ML+NYLPSILVPL GLVFPAVAMGLLFIYIEK+T E
Sbjct:    1 MLLNYLPSILVPLTGLVFPAVAMGLLFIYIEKETYE 36          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16704.1 vs. uniprot
Match: A0A2I4Q2G4_9PHAE (Photosystem I reaction center subunit VIII n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2G4_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 7.710e-12
Identity = 29/36 (80.56%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    1 MLINYLPSILVPLVGLVFPAVAMGLLFIYIEKDTIE 36
            ML++YLP ILVPLVGLVFPAV+MGLLFIY+EK+T+E
Sbjct:    1 MLLSYLPPILVPLVGLVFPAVSMGLLFIYLEKETVE 36          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16704.1 vs. uniprot
Match: D1GJM2_FUCVE (Photosystem I reaction center subunit VIII n=1 Tax=Fucus vesiculosus TaxID=49266 RepID=D1GJM2_FUCVE)

HSP 1 Score: 58.9 bits (141), Expect = 6.960e-11
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 0
Query:    1 MLINYLPSILVPLVGLVFPAVAMGLLFIYIEKD 33
            MLINYLPSILVPLVGLVFPA+AMGLLFIYI K+
Sbjct:    1 MLINYLPSILVPLVGLVFPAIAMGLLFIYIVKN 33          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16704.1 vs. uniprot
Match: B7T217_VAULI (Photosystem I reaction center subunit VIII n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T217_VAULI)

HSP 1 Score: 57.0 bits (136), Expect = 3.690e-10
Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 MLINYLPSILVPLVGLVFPAVAMGLLFIYIEKDTIE 36
            M I+YLPSILVPLVG+VFP ++M LLF+YIEKD IE
Sbjct:    1 MTISYLPSILVPLVGIVFPGISMALLFVYIEKDDIE 36          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16704.1 vs. uniprot
Match: A0A2H4JD23_9CHLO (Photosystem I reaction center subunit VIII n=1 Tax=Pedinophyceae sp. YPF-701 TaxID=765719 RepID=A0A2H4JD23_9CHLO)

HSP 1 Score: 56.6 bits (135), Expect = 5.240e-10
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0
Query:    4 NYLPSILVPLVGLVFPAVAMGLLFIYIEKDTIE 36
            +YLPSILVPLVGLVFPA+AMG +FIYIEKD I 
Sbjct:    4 SYLPSILVPLVGLVFPAIAMGSIFIYIEKDAIS 36          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16704.1 vs. uniprot
Match: A0A141BSI1_9PHAE (Photosystem I reaction center subunit VIII n=1 Tax=Sargassum horneri TaxID=74089 RepID=A0A141BSI1_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 1.060e-9
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 MLINYLPSILVPLVGLVFPAVAMGLLFIYIEKDTIE 36
            MLINYLPSILVPLVGLVFPAVA  + F+Y  KDTIE
Sbjct:    1 MLINYLPSILVPLVGLVFPAVAKRVFFMYTVKDTIE 36          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16704.1 vs. uniprot
Match: A0A1D8D9G2_9STRA (Photosystem I reaction center subunit VIII n=1 Tax=Toxarium undulatum TaxID=210620 RepID=A0A1D8D9G2_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.040e-9
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0
Query:    4 NYLPSILVPLVGLVFPAVAMGLLFIYIEKDTIE 36
            ++LPSILVPLVGLVFPA+AM LLFIYI KD IE
Sbjct:    4 SFLPSILVPLVGLVFPALAMSLLFIYISKDDIE 36          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16704.1 vs. uniprot
Match: C0JWL2_MONSK (Photosystem I reaction center subunit VIII n=1 Tax=Monomastix sp. (strain OKE-1) TaxID=141716 RepID=C0JWL2_MONSK)

HSP 1 Score: 54.3 bits (129), Expect = 4.330e-9
Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MLINYLPSILVPLVGLVFPAVAMGLLFIYIEKDTIE 36
            ML  YLPSILVPLVGLVFPA+AM  LF+YIEKD I 
Sbjct:    1 MLSLYLPSILVPLVGLVFPAIAMASLFVYIEKDQIS 36          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig869.16704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J7D1_ECTSI3.360e-15100.00Photosystem I reaction center subunit VIII n=51 Ta... [more]
A0A8E5XRH6_9PHAE4.620e-1388.89Photosystem I reaction center subunit VIII n=1 Tax... [more]
A0A8F0F7C5_9PHAE6.570e-1388.89Photosystem I reaction center subunit VIII n=1 Tax... [more]
A0A2I4Q2G4_9PHAE7.710e-1280.56Photosystem I reaction center subunit VIII n=1 Tax... [more]
D1GJM2_FUCVE6.960e-1190.91Photosystem I reaction center subunit VIII n=1 Tax... [more]
B7T217_VAULI3.690e-1075.00Photosystem I reaction center subunit VIII n=1 Tax... [more]
A0A2H4JD23_9CHLO5.240e-1081.82Photosystem I reaction center subunit VIII n=1 Tax... [more]
A0A141BSI1_9PHAE1.060e-980.56Photosystem I reaction center subunit VIII n=1 Tax... [more]
A0A1D8D9G2_9STRA3.040e-981.82Photosystem I reaction center subunit VIII n=1 Tax... [more]
C0JWL2_MONSK4.330e-977.78Photosystem I reaction center subunit VIII n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001302Photosystem I reaction centre subunit VIIITIGRFAMTIGR03052TIGR03052coord: 5..33
e-value: 6.3E-20
score: 68.7
IPR001302Photosystem I reaction centre subunit VIIIPFAMPF00796PSI_8coord: 6..30
e-value: 1.0E-14
score: 54.0
IPR001302Photosystem I reaction centre subunit VIIIPANTHERPTHR35775FAMILY NOT NAMEDcoord: 3..35
IPR001302Photosystem I reaction centre subunit VIIIHAMAPMF_00431PSI_PsaIcoord: 3..36
score: 14.88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..36
NoneNo IPR availablePRODOMPD003995coord: 6..35
e-value: 1.0E-6
score: 119.0
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR036357Photosystem I reaction centre subunit VIII superfamilySUPERFAMILY81540Subunit VIII of photosystem I reaction centre, PsaIcoord: 1..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig869contigE-siliculosus-1a_M_contig869:5802..5912 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig869.16704.1mRNA_E-siliculosus-1a_M_contig869.16704.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig869 5802..5912 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig869.16704.1 ID=prot_E-siliculosus-1a_M_contig869.16704.1|Name=mRNA_E-siliculosus-1a_M_contig869.16704.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=37bp
MLINYLPSILVPLVGLVFPAVAMGLLFIYIEKDTIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036357PSI_PsaI_sf
IPR001302PSI_PsaI