mRNA_E-siliculosus-1a_M_contig86.16654.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig86.16654.1
Unique NamemRNA_E-siliculosus-1a_M_contig86.16654.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig86.16654.1 vs. uniprot
Match: D8LBT2_ECTSI (DJ-1_PfpI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBT2_ECTSI)

HSP 1 Score: 436 bits (1121), Expect = 1.050e-145
Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 1 
Query:    1 MPKILLVLTSSKMMGEKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKASA 681
            MPKILLVLTSSKMMGEKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTA GAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSK DPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKASA
Sbjct:    1 MPKILLVLTSSKMMGEKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTADGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKADPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKASA 227
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16654.1 vs. uniprot
Match: A0A6U0IZP5_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IZP5_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.010e-64
Identity = 120/226 (53.10%), Postives = 151/226 (66.81%), Query Frame = 1 
Query:    1 MPKILLVLTSSKMMGEKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGA-KTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKA 675
            MPKI++V TS+  +   +TG WLEE AAP+  F DAGYE++IASP GG  P+DAGS  +A+LTD  ++F  D  A   L+ TTKLS  D SA  A+FF GGHGTCVDF ++ SV+G +E +YGAG V++AVCHGPT      K      LV    +TGFTDTEE  V LT KVPFLLE KL E G  F + D W P   VDG+++TGQNP SSE  A+  +++L A
Sbjct:    1 MPKIIIVSTSAPELAGHKTGLWLEECAAPYYKFKDAGYEIEIASPAGGPVPLDAGSLGEAFLTDACKKFLFDPEAMGMLSHTTKLSAADLSAADAIFFCGGHGTCVDFIDDASVKGAIETLYGAGKVVAAVCHGPTCLPQCTKPGTDEPLVKDLVVTGFTDTEEEAVQLTGKVPFLLEQKLKEQGGKFERADDWNPKVCVDGKLITGQNPQSSEACAEATIKMLSA 226
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16654.1 vs. uniprot
Match: A0A830H344_9CHLO (DJ-1_PfpI domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H344_9CHLO)

HSP 1 Score: 215 bits (547), Expect = 6.610e-61
Identity = 117/228 (51.32%), Postives = 151/228 (66.23%), Query Frame = 1 
Query:    7 KILLVLTSSKMMG---EKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLT----DKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVL 669
            K+LLV TS+   G   +K++G W EE A P+ +F DAG  V IASP GG  P+DAGSKADA++TDYTR+FDADA A A L ++TKLSDVD++ + AV+ AGGH T  DFP+N  +  ++E +Y AG V++A CHGP   V  K A G  LVSG  +TGF DTEE  VGL     D +PF L+ K  ELG +F     W+  AV  G+++TGQNP SSE  AQ ++  L
Sbjct:    5 KVLLVCTSASKWGKDQDKDSGAWYEEVACPYYVFKDAGLSVVIASPLGGPIPIDAGSKADAFMTDYTRKFDADADALAVLNSSTKLSDVDAATFDAVYLAGGHATYTDFPDNKELIAIVETLYNAGKVVAADCHGPVGLVNCKKADGTPLVSGLNVTGFLDTEEQAVGLDPVKCDVLPFSLQQKFTELGGNFQAGADWSSNAVSAGKLITGQNPQSSEQVAQAMLTAL 232
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16654.1 vs. uniprot
Match: UPI00146C4373 (type 1 glutamine amidotransferase domain-containing protein n=1 Tax=Pseudonocardia acidicola TaxID=2724939 RepID=UPI00146C4373)

HSP 1 Score: 214 bits (544), Expect = 1.370e-60
Identity = 113/224 (50.45%), Postives = 152/224 (67.86%), Query Frame = 1 
Query:    7 KILLVLTSSKMMGE--KETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLK 672
            KIL+VLTS   +G+    TGFWLEE AAP+ +F DAG E+ +ASP GG PP+D  S      T+ T+RF AD AA+A LA T KL+DV +  + AVF+ GGHG   D P+N +   ++EK   AG  I AVCH P A V  +T  GA+ V+GK++TGF+++EEA VGLTD VPFLL+ +LIE G  + + + W P+  VDGR+VTGQNP SS   AQ+++ +L+
Sbjct:    2 KILMVLTSHDRLGDTGNPTGFWLEEFAAPYYVFADAGAEITLASPAGGQPPLDPKSDEPDAQTEATKRFQADEAAEALLANTVKLADVSAEDFDAVFYPGGHGPMWDLPDNETSIALIEKFLAAGKPIGAVCHAPAALVNVRTQDGASFVAGKRVTGFSNSEEAGVGLTDVVPFLLQDRLIERGGGYGRAEDWAPHVEVDGRLVTGQNPASSAPAAQELLALLR 225
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BLAST of mRNA_E-siliculosus-1a_M_contig86.16654.1 vs. uniprot
Match: A0A7S4I150_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I150_9STRA)

HSP 1 Score: 213 bits (542), Expect = 2.810e-60
Identity = 113/224 (50.45%), Postives = 149/224 (66.52%), Query Frame = 1 
Query:    1 MPKILLVLTSSKMMGEKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGA-KTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVL 669
            M K ++V TS+  +   +TG WLEE AAP+  F +AGYE+DIASP GG  P+D+GS  + +LTD  ++F  D  A   L+ T+KLSDVD SA  A+FF GGHGTCVDF ++ SV+G +E +YGA  V++AVCHGP       K  +   LV G  +TGFTDTEE+ V L  KVPFLLE KL E G  F + D W     +DG++VTGQNP SSE  A+ V++++
Sbjct:    1 MTKAIIVSTSAPELAGHKTGLWLEECAAPYYKFKEAGYEIDIASPAGGPVPLDSGSLQEMFLTDACKKFLFDPEAMGMLSHTSKLSDVDLSAADAIFFCGGHGTCVDFIDDASVKGAIETLYGADKVVAAVCHGPNCLPQCVKPGSTDPLVKGLTVTGFTDTEESAVQLASKVPFLLEQKLKEQGCIFERADDWNSKVCIDGKLVTGQNPQSSEACAEAVIKII 224
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16654.1 vs. uniprot
Match: A0A2G1MGR6_9RHOB (Type 1 glutamine amidotransferase domain-containing protein n=1 Tax=Limimaricola cinnabarinus TaxID=1125964 RepID=A0A2G1MGR6_9RHOB)

HSP 1 Score: 212 bits (539), Expect = 7.520e-60
Identity = 111/226 (49.12%), Postives = 152/226 (67.26%), Query Frame = 1 
Query:    1 MPKILLVLTSSKMMGE--KETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLK 672
            M KIL++LTS   +G+  ++TGFWLEE AAP+ +F DAG EV +ASP+GG PP+D  S A+ + TD TRRF  D AAQ +LA+T +L ++  + Y AVF+ GGHG   D   NP  + ++E     G  + AVCH P  F   +T  G  LV G+K+TGFT+ EE  VGLTD VPFLLE  L E GA++ K + W P+ V DG++VTGQNP SSE  A+K++++++
Sbjct:    1 MTKILMILTSHDRLGDTGEKTGFWLEEFAAPYYVFKDAGVEVTLASPQGGQPPLDPKSDAEDFQTDATRRFKEDKAAQEQLASTERLDEIYPTQYDAVFYPGGHGPMWDLAENPDSRRIIETFVTEGRPLGAVCHAPAVFRHTQTEDGKPLVEGRKLTGFTNGEEEGVGLTDVVPFLLEDMLKEKGAEYQKGEDWAPFVVTDGKLVTGQNPASSEEAAKKLLDLVE 226
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16654.1 vs. uniprot
Match: A0A2S0IP02_9GAMM (Type 1 glutamine amidotransferase domain-containing protein n=4 Tax=Idiomarinaceae TaxID=267893 RepID=A0A2S0IP02_9GAMM)

HSP 1 Score: 211 bits (537), Expect = 1.490e-59
Identity = 111/225 (49.33%), Postives = 153/225 (68.00%), Query Frame = 1 
Query:    7 KILLVLTSSKMMGE--KETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKA 675
            KIL+VLTS   +G+   +TGFW+EE AAP+ +FTDAG EV IASP+GG PP+D  S A+   T+ TRRFD D +AQ KLA + KL +++   + A+F+ GGHG   D  N+     ++E+ +  G  ++AVCH P   + AKT AG  +V G+ +TGF+++EE  VGLT  VPFLLE  L E G  + KVD W  YAV DG ++TGQNP SSE TA+++++VL+A
Sbjct:    2 KILMVLTSHDELGDTGNKTGFWVEEFAAPYYVFTDAGAEVTIASPKGGQPPIDPNSAAEDAQTEATRRFDNDESAQQKLATSCKLDEINVDDFDAIFYPGGHGPLWDLTNDEHSIHLIEQFWSKGKPVAAVCHAPAVLLNAKTPAGDPIVQGRTVTGFSNSEEEAVGLTSVVPFLLEDALGEKGGHYRKVDDWQAYAVQDGMLITGQNPASSEQTAERLLDVLRA 226
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16654.1 vs. uniprot
Match: A0A259L1Q6_9GAMM (Type 1 glutamine amidotransferase domain-containing protein n=3 Tax=Idiomarinaceae TaxID=267893 RepID=A0A259L1Q6_9GAMM)

HSP 1 Score: 211 bits (536), Expect = 1.950e-59
Identity = 114/225 (50.67%), Postives = 152/225 (67.56%), Query Frame = 1 
Query:    7 KILLVLTSSKMMGEK--ETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKA 675
            KIL+VLTS + +G+   +TGFW EE AAP+  F DAG EV +ASP+GG PP+D  S+     T+ T R   D AA  +LA T KLSDV +  + A+F+ GGHG   D   +P   G++++ +     ++AVCH P   V AKT AG  LV G+K++GFT++EEA VGLTD VPFLLE KL ELG  + KVD W PYAVVDG ++TGQNP SSE  A+++++ LK+
Sbjct:    2 KILMVLTSHEQLGDSGHKTGFWAEEFAAPYYAFKDAGAEVVLASPKGGQPPIDPNSEQADAQTNATVRLFEDEAAMTQLANTLKLSDVTADEFDAIFYPGGHGPLWDLSQDPLSIGLIQQFWEQEKPVAAVCHAPAVLVNAKTPAGEPLVKGRKVSGFTNSEEAAVGLTDVVPFLLEDKLKELGGLYEKVDDWKPYAVVDGNLITGQNPASSEAVAEQLLKKLKS 226
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16654.1 vs. uniprot
Match: A0A8J3KFY5_9ACTN (Dimethylallyltransferase n=4 Tax=Catellatospora TaxID=53365 RepID=A0A8J3KFY5_9ACTN)

HSP 1 Score: 211 bits (536), Expect = 2.140e-59
Identity = 110/224 (49.11%), Postives = 149/224 (66.52%), Query Frame = 1 
Query:    7 KILLVLTSSKMMGE--KETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLK 672
            K+L+V+TS   +G+  ++TGFWLEE AAP+  F DAG++V +ASP GG PP+D  S    + TD TRRF+ADA A+A+L  T +L  V +  +  VF+ GGHG   D   +P+   ++E+V  +G  I+ VCH P A    KT  G  LV+G+K+TGFTDTEE  VGLT  VPFL+E +L+  GA FSK D W PY V DGR+VTGQNP SS   A K++ +++
Sbjct:    2 KVLMVITSHDQLGDTGRKTGFWLEELAAPYYRFRDAGWDVTLASPRGGRPPLDPKSNEPDFQTDLTRRFEADADAEAQLDTTLRLDSVSADDFDTVFYPGGHGPMWDLAEDPTSIALIEQVVRSGKAIALVCHAPGALRHVKTPEGTPLVAGRKVTGFTDTEEEAVGLTKVVPFLVEDELVAKGAHFSKADDWQPYVVTDGRLVTGQNPASSGPAADKLISLVQ 225
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16654.1 vs. uniprot
Match: UPI0012659862 (type 1 glutamine amidotransferase domain-containing protein n=1 Tax=Marinobacter changyiensis TaxID=2604091 RepID=UPI0012659862)

HSP 1 Score: 210 bits (535), Expect = 2.790e-59
Identity = 112/226 (49.56%), Postives = 150/226 (66.37%), Query Frame = 1 
Query:    7 KILLVLTSSKMMGEK--ETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKAS 678
            K+L+VLTS   +G+   +TGFWLEE  AP+ +F DAG ++ +ASP+GG PPVD  S+A+  LT  TRRF+ DA A+  LA+T KL+DVD S + A+F+ GGHG   D  NN     +++  Y    VI AVCH P  F   +   G  +V G+K+TGF+++EE  VGLT+ VPFLLE  L E  A +SK D W PY VVDG+++TGQNP SSE  A+ VV+ L+ S
Sbjct:    2 KVLMVLTSHDQLGDSGNKTGFWLEEFTAPYYVFKDAGADITLASPKGGQPPVDPASEAEEALTATTRRFEEDAHAKESLASTKKLADVDMSQFDAIFYPGGHGPMWDLANNEKSIALIKTAYEQDKVICAVCHAPAVFRNVEVKPGQNIVGGRKVTGFSNSEEEAVGLTNIVPFLLEDMLKENAATYSKGDDWAPYIVVDGKLITGQNPASSEGAAKAVVQALQES 227
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig86.16654.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBT2_ECTSI1.050e-14599.12DJ-1_PfpI domain-containing protein n=2 Tax=Ectoca... [more]
A0A6U0IZP5_9STRA1.010e-6453.10Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A830H344_9CHLO6.610e-6151.32DJ-1_PfpI domain-containing protein n=1 Tax=Pycnoc... [more]
UPI00146C43731.370e-6050.45type 1 glutamine amidotransferase domain-containin... [more]
A0A7S4I150_9STRA2.810e-6050.45Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A2G1MGR6_9RHOB7.520e-6049.12Type 1 glutamine amidotransferase domain-containin... [more]
A0A2S0IP02_9GAMM1.490e-5949.33Type 1 glutamine amidotransferase domain-containin... [more]
A0A259L1Q6_9GAMM1.950e-5950.67Type 1 glutamine amidotransferase domain-containin... [more]
A0A8J3KFY5_9ACTN2.140e-5949.11Dimethylallyltransferase n=4 Tax=Catellatospora Ta... [more]
UPI00126598622.790e-5949.56type 1 glutamine amidotransferase domain-containin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig86contigE-siliculosus-1a_M_contig86:331683..336990 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size684
Model size2418
Exons4
Ec32 orthologEc-27_002800.1
Ec32 ortholog descriptionThiJ/PfpI
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2RZ3Y@2759,COG0693@1
EggNOG free text desc.glyoxalase III activity
Seed eggNOG ortholog2880.D8LBT2
Seed ortholog evalue6.2e-120
Seed ortholog score436.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig86.16654.1prot_E-siliculosus-1a_M_contig86.16654.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig86 331683..335256 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936312.4987977-CDS-E-siliculosus-1a_M_contig86:331682..3317401622936312.4987977-CDS-E-siliculosus-1a_M_contig86:331682..331740Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 331683..331740 +
1696251020.314537-CDS-E-siliculosus-1a_M_contig86:331682..3317401696251020.314537-CDS-E-siliculosus-1a_M_contig86:331682..331740Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 331683..331740 +
1622936312.5160842-CDS-E-siliculosus-1a_M_contig86:333545..3336581622936312.5160842-CDS-E-siliculosus-1a_M_contig86:333545..333658Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 333546..333658 +
1696251020.32821-CDS-E-siliculosus-1a_M_contig86:333545..3336581696251020.32821-CDS-E-siliculosus-1a_M_contig86:333545..333658Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 333546..333658 +
1622936312.534431-CDS-E-siliculosus-1a_M_contig86:334390..3347141622936312.534431-CDS-E-siliculosus-1a_M_contig86:334390..334714Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 334391..334714 +
1696251020.339805-CDS-E-siliculosus-1a_M_contig86:334390..3347141696251020.339805-CDS-E-siliculosus-1a_M_contig86:334390..334714Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 334391..334714 +
1622936312.565182-CDS-E-siliculosus-1a_M_contig86:335067..3352561622936312.565182-CDS-E-siliculosus-1a_M_contig86:335067..335256Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 335068..335256 +
1696251020.3519998-CDS-E-siliculosus-1a_M_contig86:335067..3352561696251020.3519998-CDS-E-siliculosus-1a_M_contig86:335067..335256Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 335068..335256 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936312.5776534-UTR-E-siliculosus-1a_M_contig86:335256..3369901622936312.5776534-UTR-E-siliculosus-1a_M_contig86:335256..336990Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig86 335257..336990 +
1696251020.364949-UTR-E-siliculosus-1a_M_contig86:335256..3369901696251020.364949-UTR-E-siliculosus-1a_M_contig86:335256..336990Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig86 335257..336990 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig86.16654.1

>prot_E-siliculosus-1a_M_contig86.16654.1 ID=prot_E-siliculosus-1a_M_contig86.16654.1|Name=mRNA_E-siliculosus-1a_M_contig86.16654.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=228bp
MPKILLVLTSSKMMGEKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAP
PVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAG
GHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALV
SGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVD
GRVVTGQNPMSSELTAQKVVEVLKASA*
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mRNA from alignment at E-siliculosus-1a_M_contig86:331683..336990+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig86.16654.1 ID=mRNA_E-siliculosus-1a_M_contig86.16654.1|Name=mRNA_E-siliculosus-1a_M_contig86.16654.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5308bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig86:331683..336990+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCCGAAGATTTTGCTGGTCTTGACCTCTTCCAAGATGATGGGCGAGAA
GGAAACAGGTGTGCATGGAGCGCAGATTTGTACGTACCTGGTGAACAGCT
GCTTTGGATTTGATGTGAACGGACATAAGGCGGGCGGGTCGTTTTCTCTT
CTTTCACCCGGTACCCAAAAAGCCAGAACTGAGATATCTATAGCGGTTTG
AGCGCAGCCGGTGTTCGTAGAGAATTCTGTCTGCACGGACGCGATAACAG
CTTCCCTGCACACGAACCGCTTACAGTACGTGCATCGAACCGCATCGTGT
TCGGGTTGTGCAGCAGTAGCAGCAGCAGCAGCAAGAGAACGAGCCGTGAT
GATACTCGTGAAGTAGATTTCGTCATAAGCTAACATAGCAGCAGCAGCCA
TGCAGCAACAAACATGCGTCGAAGATTCAACGTTGAGACTTTTGTGTAAG
ATCTGGCCATCCTTGGGAGCCATCCTCTGGGGTTGTGGTGGCGTTACACC
AAGACGCGTTTTTGTGTGTCCTACAATGTACAACCCCCAAACTTTTTTCA
ATTGATTTGTCTCATTTCGTGTAGCAGCAAGCCGGAGATAGATCCATCGG
GCAGGCGCTGACTGGTCTAGACTATTTGAGTACGTACGTTACGACGAAGA
GCAATACAGACAGTAAATACAGCAGTGACCACGGTATAATGCCGGTGAAA
TCTGGAACAGCTAGCTAGAATATTCAACTTGTTTCATACTCTGAATCCTG
AATAATGCCGGTTGCCCGCTAAGACTAATGCCGGTGAAATCGGCTGGATC
GCACCGGCATCATGTATATGCATGCCAGGACCAAGTACACTATGTAGTGT
GCATACAGGGAATCGTCCTCGCACAGACGTTGGGAGATTGTAGGTGATAT
CCACAACCATTAGTCCATCAACGACCAGCCAGACGATCCGCACGGTCCCA
TCTTCTATCGTCGCTTGAACTCCAGTATGCACCGCGTGGCCTAGATCAGG
ATGCTTTGAATTTCTCGTGCGTATTGTACAATACACGTTTTTTTACAACA
TTTTGTCGCCGAGAGATTCCAGCTTGCAACAGATGCGGCGCACTCACTGA
ATCTCTCTACCGGTGGCGTCGAATTGAGCGGTAGACAATATCGCAAGCGA
TCCATATCGGCTGTGCAGATCCCGCATGTGAAAGGTGCGGTCCACGTTGC
GCTTCTTTCTGTATCAAGCGCGACAAACGCAATTTCGTCCGTCACCAAAC
CCCTCGCTTCCGATCGGAGCCTTTCTGCCCCCGGAGGGGGTCAGCCCGTG
ACGCTGCTACAATTGCGTGTTTCCCTGGGAAACTGGCATCGCTTGTAAGC
TAGAGTCAGGCGAGCGTAGCGGCAGTTGGCCGTTCTATTTTTCTTAGCGT
GTTTACCAAATCGGCCGTGTGTCGCGATTTTCTCACCCAGAAAGCACCAT
CTCCTGAACTCCTGAAGTTTCTGGGGCAGTTACAACAATGACCCAAGATT
ATGATGGAACGCTGGAGATTGTTATGGCACGCCGCGCATCCTTTCCGGAT
ATATGGTTGGTGGTGTGCGAGAACGTCATTGAACTCGATTTGTGGTTTTT
AGCCGCAACTTTGGCGCATCAAACAACAACCGACCTTGCTGTGCAGCTAT
AGAATGACGGTAGCCGCTGTATGCTGCAGCTGTCGTTGGTGGCAAAGTAG
GCTAGGTTAGATGAACAGACGCAAGAGACACCCAGGGTACCTTCGTACGG
CAGCTACAACTCAATGACGTCTATATATTTCGCGGTGTAGGAGGGATGTT
TCGTTGTACACACGCGCTCATTCTGGTAGTCGCTGCTTCTGCCTGCGTAC
ACGTCGGTCGCAGGGTTTTGGCTGGAAGAGGCCGCGGCCCCGCACGCGAT
CTTCACCGACGCTGGCTACGAAGTTGACATCGCTTCTCCCGAGGGCGGCG
CCCCTCCCGTCGACGCGGGGTCCAAGGTATGATTCAACAAGGGAGCTAAG
CGAAAAAAGGTGCTTGCCACGAAGAAAGAAATGCAGACTCTTCCTCGGCC
ACTCCACGGTCTGGACTTTCGTACACATTAGCACCCATTACAACCATGGG
ACCCAGTGCTTCCAGGGTTATCTCTTGACAGTCGGAATCGCGCTGAATTG
ACAGTGACCCGGTCTGGACTTTCGTACACATTAGCACCCATTACAACCAT
GGGACCCAGTGCTTCCAGGGTTATCTCTTGACAGTCGGAATCGCGCTGAA
TTGACAGTGACCCGGTCGGTGTTCCGGCAAGCCGTTCAGGAAAGGGGCTC
GATAGACGAGAATGTGTTGTGACGGGGACGCAAGTTTGTGTCTGCAGTGT
TGTCGTGCAGGAGGGGTGCGGCCAACAGGTCGACTCCGGTTTGGTCCTCC
ATGAAACAAGTTATGGTGGTGACCACGATAAATTAGCTGAGACAACACTG
TCGGAGATAGCTCATCGTGGAGATGTGCGGCAGCTCCGCCGAGACCTAAG
TTGCTGCTCTATTGTGTTCGGGGACAGAGCCGCCGTCATCGTGACTCTTG
TCCAAGACAAGTACACGACACCACCATACTGGCGCTCTCCGTCCAATTTC
TCCAGACAGCGAGCGAAACACTCTGGAGCCGCCAGCTGTTCTCGTTTCAC
ACCCGCACCTTTTTTTGTCGATCGATACCACCTCCCCATCAATACATTTA
CGGGACAGGCGGACGCCTACCTGACAGACTACACGCGTCGGTTCGATGCG
GACGCGGCGGCTCAGGCCAAGCTGGCGGCCACGACGAAGCTTTCGGACGT
GGACTCGTCCGCCTACGCGGCGGTGTTTTTCGCCGGCGGGCACGGGACGT
GCGTGGACTTCCCCAACAACCCATCAGTGCAGGGGGTGATGGAGAAGGTG
TACGGGGCGGGAGGGGTGATATCGGCCGTGTGCCACGGGCCGACAGCGTT
CGTTGGGGCCAAAACCGCCGCTGGGGCAGCCCTTGTGTCTGGGAAAAAAA
TGACGGGCTTCACGGACACGGAGGAGGCACAGGTGTGTGGAAGAAATTTG
AATGCATGCATGCAGGGATGTTTCGGGGATCGGCATGTGTTGTGCCGATC
TCGGGCGGAGTTTCAGCTGGCAGCACGGCGATGGATGGTGTTGGCGTTTG
CTGTTTCACCCTGTTTTGTACCGTAGATTTCGCGTGAATCTATGATTAAC
ACTTGTCACGGTGCGTTGTATGCTGGTGTATGTGGTTATTGCATCGTCGT
GTGCTGTATTGCAGTTGGTCAAGATGTGTTTCGTGTTGGCATGTTAAATC
CACGTCATCGTTCTCTTCTTCGGTATTCATTCACGACGTGCCTCAACACC
GTGGTACATGCGCTTGTACGTGCCTCACCCCGCAGGTGGGACTTACCGAC
AAGGTTCCTTTCCTGCTGGAGGCCAAGCTGATTGAGCTTGGCGCGGACTT
TAGCAAGGTGGACCCTTGGACCCCCTACGCGGTCGTCGATGGCCGCGTTG
TGACGGGGCAGAACCCCATGTCTTCTGAACTGACGGCGCAGAAGGTTGTG
GAGGTGCTCAAAGCTTCTGCCTAGAGAACGACTCGTCAGGACCTGAAGCG
AACCCTAGGCACGGCATCGTCACGCTATGCCAGCTTCTGACGGGCATGCA
TACATACTCGTCCGAGTAGATCCTGTGTTCTTGTTATGACCCTTCAAGTG
GTAATTTCTGTTTCACGATACCTTTTGAGTGCAGGGTGGCTGTAGGCCCC
GGTGGCGTAGAGCTGACACCATACTTTTTTTTTTTTTTTTCGCGATGCCG
TGACAAAGATCGCCCATTTACGGGGTGAAGGTTACCCTTTTGCTAAGGCT
CGATTCCTCCAGGTGGACCGAGGACGAGGGGTAGGTATGGCACGCATGCA
GGCTCGTCCCCAAGGATTGAAGGCATCCTCGAAACCTTGGGATGGTGAAG
GCCGTCAGTGGAAATATCGCGTGGCACTGCTGTATTGAGAGCGCTTGTTT
TGTGAGGCCAAGAAAGTTGACTTTATTGTACACGTTGGAAAGTTGAACCT
TCTTGCAACAATGTTGAAGGCATAAGACTGTATACAGATTTGTAAATGTT
GGTTCGTTGAGGTTCGCTGGGTTCTTCAAGTAAAAAACTGTGTGAGTGGT
TGAGCTTGGGAAACGTCGCAACCAACTGGCTTCTGGCAGCCAGCTGCGGG
CTGGTCCTGCTGCCTGCTTGCGGTGCCATCTTGCATCACCCCTTGATGGC
ACTATGACCTCGTGAGCCTACTTTGAAGGGATCGCTCGTAGTAACAGCAG
AGGAATTCGGTTTGTGATCCCAGATTCACTCCTCAGTAGAGGCAAACAAC
GCCCCGTAGGTATTGACACTTGAGACAGAACGAGTGTAGAACGGGGAAAT
TGATGTTATGGGGACTGTTACTTTAATTGCTGCTGGTTCTTACCAGTTTT
TTATGCCCGCCGTCACCTCCCCCTCGCCACACGCTACCGAACTGGTTGAT
AGGAGTTATGCGGGTCCAACCCGCACAAGCCATCTTCTACCGCGTCCTGT
TTTCTCTCGCAGGGAAACGGCGACACACCTAGCGACATCTAAATTCCCGG
CAGAACCTACGCTCGCTAGAGAGCTCACGTACGTGACTACTCAGTCATCA
GCCAACTCAGCCTATCTAATAAACACACAGCACACAAGGTGTATGCTGGC
TTCACTGGTCCAGGAATGATCGTGAATGTACCGTAGCACAGGTGACACCA
TTCCGCCCACCATATCACGAATCGTGTGCCCTCCTCAACGACAGGGGCCC
AGCGAAGTACCAACGAGGTGAACATACAATCTTTCATGAACGCAAGACTT
CACTGGCACAAGCTGGTCTTATTGCACCAGAACACCTCCGTATCATAAAA
CAAGTCGACTCTCCCACTCAACCGTAGCCCTTCGCGTGTGTCTGGGTGCG
TCTTCACCAATCTTTGAGCTCGCAGTAAGGCATCCGCCCGTTCGCGCTCC
GGTCTTTGGCGGGCAGGCGTAGCGTTGCGGAGAGCGGGAGGGTCGTACTC
AGTTGCTGCTTGCCTTGTCCATGCGATCATTGGCCGCTCCCTTAGGCAAA
CCTCCTACAATTTTTGTGCTCTGTCCGTTTCTCTATGCGTTTCTTTCGTA
TTTTACGTGTAATTCTTGGTTACCTCTTTCCGGGAGGATCCCACCGACCT
TGCCTACTTGTGCGCTGCCCTTCCTTGATATCGGAGATTTGGTCTTTCCT
GGTATCGCTAGGGCGTTCTAGTACTAAGTAGGTTTTTGTGGTCCTGCGGG
TGTTTCCG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig86:331683..336990+

>mRNA_E-siliculosus-1a_M_contig86.16654.1 ID=mRNA_E-siliculosus-1a_M_contig86.16654.1|Name=mRNA_E-siliculosus-1a_M_contig86.16654.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1368bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig86:331683..336990+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCCGAAGATTTTGCTGGTCTTGACCTCTTCCAAGATGATGGGCGAGAA
GGAAACAGATGCCGAAGATTTTGCTGGTCTTGACCTCTTCCAAGATGATG
GGCGAGAAGGAAACAGGGTTTTGGCTGGAAGAGGCCGCGGCCCCGCACGC
GATCTTCACCGACGCTGGCTACGAAGTTGACATCGCTTCTCCCGAGGGCG
GCGCCCCTCCCGTCGACGCGGGGTCCAAGGGTTTTGGCTGGAAGAGGCCG
CGGCCCCGCACGCGATCTTCACCGACGCTGGCTACGAAGTTGACATCGCT
TCTCCCGAGGGCGGCGCCCCTCCCGTCGACGCGGGGTCCAAGGCGGACGC
CTACCTGACAGACTACACGCGTCGGTTCGATGCGGACGCGGCGGCTCAGG
CCAAGCTGGCGGCCACGACGAAGCTTTCGGACGTGGACTCGTCCGCCTAC
GCGGCGGTGTTTTTCGCCGGCGGGCACGGGACGTGCGTGGACTTCCCCAA
CAACCCATCAGTGCAGGGGGTGATGGAGAAGGTGTACGGGGCGGGAGGGG
TGATATCGGCCGTGTGCCACGGGCCGACAGCGTTCGTTGGGGCCAAAACC
GCCGCTGGGGCAGCCCTTGTGTCTGGGAAAAAAATGACGGGCTTCACGGA
CACGGAGGAGGCACAGGCGGACGCCTACCTGACAGACTACACGCGTCGGT
TCGATGCGGACGCGGCGGCTCAGGCCAAGCTGGCGGCCACGACGAAGCTT
TCGGACGTGGACTCGTCCGCCTACGCGGCGGTGTTTTTCGCCGGCGGGCA
CGGGACGTGCGTGGACTTCCCCAACAACCCATCAGTGCAGGGGGTGATGG
AGAAGGTGTACGGGGCGGGAGGGGTGATATCGGCCGTGTGCCACGGGCCG
ACAGCGTTCGTTGGGGCCAAAACCGCCGCTGGGGCAGCCCTTGTGTCTGG
GAAAAAAATGACGGGCTTCACGGACACGGAGGAGGCACAGGTGGGACTTA
CCGACAAGGTTCCTTTCCTGCTGGAGGCCAAGCTGATTGAGCTTGGCGCG
GACTTTAGCAAGGTGGACCCTTGGACCCCCTACGCGGTCGTCGATGGCCG
CGTTGTGACGGGGCAGAACCCCATGTCTTCTGAACTGACGGCGCAGAAGG
TTGTGGAGGTGCTCAAAGCTTCTGCCTAGGTGGGACTTACCGACAAGGTT
CCTTTCCTGCTGGAGGCCAAGCTGATTGAGCTTGGCGCGGACTTTAGCAA
GGTGGACCCTTGGACCCCCTACGCGGTCGTCGATGGCCGCGTTGTGACGG
GGCAGAACCCCATGTCTTCTGAACTGACGGCGCAGAAGGTTGTGGAGGTG
CTCAAAGCTTCTGCCTAG
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