mRNA_E-siliculosus-1a_M_contig85.16589.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig85.16589.1
Unique NamemRNA_E-siliculosus-1a_M_contig85.16589.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig85.16589.1 vs. uniprot
Match: A0A6H5K9K8_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K8_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 7.290e-135
Identity = 238/316 (75.32%), Postives = 251/316 (79.43%), Query Frame = 2 
Query:  452 MGVATVVNVHLGNEGDTEKQVTGLLSLLEDLRSGDXXXXXXXXXXXXXXDQQHIPKTSNQRRRKLRRKEEGEHLAVRGLDEDRRLLIVVGDFNFESTSSGYRRMVSEGGLRSAANVSTEAAAAEATGWFPPATASDFPAMGPNYPANVYHAAPKLADDGVVPEKREVLRSFLGDGAAAVNAGDGVAGGVVNDGHGDDALGVVSGGGSVVDDVISDDRNAVGGVS-VRVGGDGYGGDASAXXXXXXVGEGGNESGDTVVAGDADNSGALDFVFFSAGGGGISCRSYEVHREFSQERYADGYPSVAEFEVSCPSLAPE 1396
            MGVATVVNVHLGNEGDTEKQVTGLLSLLEDLR+G+              DQ H+PKTSNQRRRKLRRK+ GE LAVRGLDEDRRLLIVVGDFNFESTSSGYRRMVSEGGL+SAANVS EAA AEATGWFPPATAS+FPA+ PNYP  VYH APKLADDGVVP+KREVLRS +GDGAAAVNA +GVAGGV NDGH +DALGV SG G VVDD   DD + VGGVS +RV                          DT VAGDADN GALDFVFFSAGGGGISCRSYEVHREFSQERYADGYPSVAEFEVSCP LAPE
Sbjct:    1 MGVATVVNVHLGNEGDTEKQVTGLLSLLEDLRAGNLRTRDLRERDGIRRDQ-HMPKTSNQRRRKLRRKK-GEDLAVRGLDEDRRLLIVVGDFNFESTSSGYRRMVSEGGLQSAANVSAEAAEAEATGWFPPATASNFPAIIPNYPVKVYHPAPKLADDGVVPDKREVLRSLVGDGAAAVNASEGVAGGVENDGHRNDALGVGSGSGGVVDDF--DDGDVVGGVSAMRV--------------------------DTFVAGDADNRGALDFVFFSAGGGGISCRSYEVHREFSQERYADGYPSVAEFEVSCPPLAPE 286
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BLAST of mRNA_E-siliculosus-1a_M_contig85.16589.1 vs. uniprot
Match: D7FZJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ1_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 3.690e-78
Identity = 130/134 (97.01%), Postives = 131/134 (97.76%), Query Frame = 2 
Query:  113 VTVVNFNVYMGYDRRGEDNSFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSLGEGMGVATVVNVHLGNEGDTEKQV 514
            V VVNFNVYMGYDRRGEDN+FRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENAC VHATLSLG GMGVATVVNVHLGNEGDTEKQV
Sbjct:   15 VRVVNFNVYMGYDRRGEDNTFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACVVHATLSLGGGMGVATVVNVHLGNEGDTEKQV 148
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BLAST of mRNA_E-siliculosus-1a_M_contig85.16589.1 vs. uniprot
Match: A0A1F9Z177_9EURY (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Euryarchaeota archaeon RBG_16_67_27 TaxID=1797980 RepID=A0A1F9Z177_9EURY)

HSP 1 Score: 73.9 bits (180), Expect = 8.880e-10
Identity = 47/146 (32.19%), Postives = 79/146 (54.11%), Query Frame = 2 
Query:  104 SEAVTVVNFNVYMGYDRRGEDNSFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSLGEGMGVATVVNVHLG-NEGDTEKQVTGLLSLLE 538
            ++ + V+ FNV+ G+   G  +  R+  +++    D+  LQE+  +RLT G     G ++ + G  +A   P  E T+G A+LSRLP+++W +  L    G+    VHATL      G   V+ VHLG  + D + QV+ +L+ L+
Sbjct:  412 TDVLRVMTFNVHQGFGADGLLDVSRIADVVRLASPDVLALQESDTVRLTNGGVDLVGYLSASLGYHVAYGPPTREQTYGVAVLSRLPIVTWSYALLTSA-GDQRALVHATLQ--SAFGSIHVIAVHLGLRQADRDVQVSEVLAYLD 554
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BLAST of mRNA_E-siliculosus-1a_M_contig85.16589.1 vs. uniprot
Match: A0A397JMH8_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397JMH8_9GLOM)

HSP 1 Score: 73.2 bits (178), Expect = 2.070e-9
Identity = 48/146 (32.88%), Postives = 75/146 (51.37%), Query Frame = 2 
Query:  113 VTVVNFNVYMGYDRRGEDNSFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSLGEGMGVATVVNVHLGNEGDTEKQVTGLLSLLEDLRS 550
            +T   + ++   D     + +R+  L+KDLE D+ GL E+ L R+ +GNR     +A    M        ++ TWGCA+LS+ P+++     LP   GE AC +HATL +  G  V  +V+ H G E D E +      L + +RS
Sbjct:  841 ITAGIWTIHFALDNDMWASEYRMRDLIKDLEIDVIGLLESDLGRIIMGNRDLTQFLAEDLNMYSDYGPGPSKHTWGCAMLSKFPIINSTHHLLPSPVGELACAIHATLDV-YGKEVDVIVS-HNGQEEDVEDRKLQTTELAKIMRS 984
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BLAST of mRNA_E-siliculosus-1a_M_contig85.16589.1 vs. uniprot
Match: A0A1F9Z911_9EURY (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Euryarchaeota archaeon RBG_16_68_13 TaxID=1797982 RepID=A0A1F9Z911_9EURY)

HSP 1 Score: 71.6 bits (174), Expect = 4.630e-9
Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 2 
Query:   95 DATSEAVTVVNFNVYMGYDRRGEDNSFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSLGEGMGVATVVNVHLG-NEGDTEKQVTGLLSLLEDL 544
            D  ++ + V+ FNV+ G+D  G  +   +  +++    D+  LQE+  +R+T G     G +A   G   A   P  E T+G AILSRLP+ SW +R L    G+    VHA L+   G     VV VHLG +  + E QV  +L+  + L
Sbjct:  409 DPGTDLLRVMTFNVHQGFDASGRLDVGGITDVVRLANPDLLALQESDTVRVTSGGVDLVGYIAGTLGYHAAYGPPTREQTYGVAILSRLPIESWSYRLLAS-EGDQRALVHARLATVRGP--LDVVAVHLGLDPRERETQVRQVLAFADSL 556
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BLAST of mRNA_E-siliculosus-1a_M_contig85.16589.1 vs. uniprot
Match: A0A162IJ80_9EURO (Calcofluor white hypersensitive protein n=1 Tax=Ascosphaera apis ARSEF 7405 TaxID=392613 RepID=A0A162IJ80_9EURO)

HSP 1 Score: 71.6 bits (174), Expect = 5.790e-9
Identity = 52/146 (35.62%), Postives = 75/146 (51.37%), Query Frame = 2 
Query:  107 EAVTVVNFNVYMGYDRRGEDNSFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSL-GEGMGVATVVNVHLGNEGDTE--KQVTGLLSLL 535
            + +T   + V+   D     +  R+   L+DLE D+ GL E+ L R+ +GNR     +A   GM + A     + TWGCA+LS+ P+++     LP   GE A  +HATL + GE   +  VV  H G E D E  +Q T  LS L
Sbjct:  691 KVLTAGIWTVHFSLDNDMWSSEVRMRDALRDLELDVVGLLESDLQRIIMGNRDTTQFLAEDLGMYVDAGPGPNKHTWGCALLSKFPIVNSTHHLLPSPVGELAPAIHATLDVYGE---MIDVVVFHSGQEEDVEDRRQQTEYLSHL 833
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BLAST of mRNA_E-siliculosus-1a_M_contig85.16589.1 vs. uniprot
Match: A0A8E6LHM2_COCPS (Uncharacterized protein n=1 Tax=Coccidioides posadasii (strain RMSCC 757 / Silveira) TaxID=443226 RepID=A0A8E6LHM2_COCPS)

HSP 1 Score: 70.9 bits (172), Expect = 8.490e-9
Identity = 48/132 (36.36%), Postives = 68/132 (51.52%), Query Frame = 2 
Query:  113 VTVVNFNVYMGYDRRGEDNSFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSL-GEGMGVATVVNVHLGNEGDTE 505
            VT   + V+   D     +  R+  L+K+LE D+ GL E+ L R+ +GNR     +A   GM +       + TWGCA+LS+ P+L+     LP   GE A  +HATL + GE   +  VV  H G E D E
Sbjct:  448 VTAGIWTVHFSLDNAMWSSEKRMRDLIKELELDVVGLLESDLQRIIMGNRDTTQYLAEDLGMYVDYGPGPNKHTWGCALLSKFPILNSTHHLLPSPVGELAPAIHATLDMYGE---LVDVVVFHSGQEEDPE 576
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BLAST of mRNA_E-siliculosus-1a_M_contig85.16589.1 vs. uniprot
Match: J3KK97_COCIM (Integral plasma membrane protein n=7 Tax=Coccidioides TaxID=5500 RepID=J3KK97_COCIM)

HSP 1 Score: 70.9 bits (172), Expect = 9.940e-9
Identity = 48/132 (36.36%), Postives = 68/132 (51.52%), Query Frame = 2 
Query:  113 VTVVNFNVYMGYDRRGEDNSFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSL-GEGMGVATVVNVHLGNEGDTE 505
            VT   + V+   D     +  R+  L+K+LE D+ GL E+ L R+ +GNR     +A   GM +       + TWGCA+LS+ P+L+     LP   GE A  +HATL + GE   +  VV  H G E D E
Sbjct:  683 VTAGIWTVHFSLDNAMWSSEKRMRDLIKELELDVVGLLESDLQRIIMGNRDTTQYLAEDLGMYVDYGPGPNKHTWGCALLSKFPILNSTHHLLPSPVGELAPAIHATLDMYGE---LVDVVVFHSGQEEDPE 811
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BLAST of mRNA_E-siliculosus-1a_M_contig85.16589.1 vs. uniprot
Match: A0A0A8L1B7_9SACH (WGS project CCBQ000000000 data, contig 00107 n=1 Tax=Kluyveromyces dobzhanskii CBS 2104 TaxID=1427455 RepID=A0A0A8L1B7_9SACH)

HSP 1 Score: 70.9 bits (172), Expect = 1.010e-8
Identity = 45/132 (34.09%), Postives = 66/132 (50.00%), Query Frame = 2 
Query:  113 VTVVNFNVYMGYDRRGEDNSFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATL-SLGEGMGVATVVNVHLGNEGDTE 505
            +T   + ++ G+D     +  R+  L+KD++ DI GL ET   R+T GNR     +A   GM         + TWGCA+LS+ P++      LP   GE A  +HAT+ + GE   +  V   H G E D E
Sbjct:  709 ITAGIWTIHFGFDNDLWASEDRMAHLIKDMQLDIVGLLETDTQRITTGNRDLTAKMAHDLGMYADYGPGPNKHTWGCALLSKFPIIKSEHHLLPSPVGELAPAIHATIDAYGE---LVDVFVFHSGQEEDEE 837
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BLAST of mRNA_E-siliculosus-1a_M_contig85.16589.1 vs. uniprot
Match: A0A6A5AZX2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AZX2_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.160e-8
Identity = 53/140 (37.86%), Postives = 71/140 (50.71%), Query Frame = 2 
Query:  119 VVNFNVYMGYDRRGEDNSFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPV---LSWGWRRLPRGPGENAC------EVHATLSLGEGMGVATVVNVHLGNEGDTEKQ 511
            V +FNVY G++R G  N   +   ++D +  +  LQE+  M+   G       +A+  GM   A     ED++GC  LS  P+   LS G   LP   GENAC      +VH T        V TVVNVHLGN+G +EKQ
Sbjct:  200 VFSFNVYQGFNRAGLTNFQPILTAIQDYQPHMVALQESDTMQAGSGAIDMTDFLAQELGMYSYAHPRTDEDSFGCTFLSVFPIVEALSTGVI-LPSPRGENACMQMVAVDVHGT--------VVTVVNVHLGNDGMSEKQ 330
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig85.16589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9K8_9PHAE7.290e-13575.32Endo/exonuclease/phosphatase domain-containing pro... [more]
D7FZJ1_ECTSI3.690e-7897.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1F9Z177_9EURY8.880e-1032.19Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A397JMH8_9GLOM2.070e-932.88Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
A0A1F9Z911_9EURY4.630e-933.77Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A162IJ80_9EURO5.790e-935.62Calcofluor white hypersensitive protein n=1 Tax=As... [more]
A0A8E6LHM2_COCPS8.490e-936.36Uncharacterized protein n=1 Tax=Coccidioides posad... [more]
J3KK97_COCIM9.940e-936.36Integral plasma membrane protein n=7 Tax=Coccidioi... [more]
A0A0A8L1B7_9SACH1.010e-834.09WGS project CCBQ000000000 data, contig 00107 n=1 T... [more]
A0A6A5AZX2_9STRA1.160e-837.86Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig85contigE-siliculosus-1a_M_contig85:149035..156326 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1260
Model size2698
Exons5
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelTremellales
COG Functional cat.T
EggNOG OGs38F49@33154,3NVQ6@4751,3UXX6@5204,3VEU9@5234,KOG3979@1,KOG3979@2759
EggNOG free text desc.Frag1/DRAM/Sfk1 family
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0005933,GO:0005934,GO:0005935,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0019538,GO:0019637,GO:0030427,GO:0031224,GO:0031226,GO:0031505,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045017,GO:0045229,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509
Preferred nameCWH43
Seed eggNOG ortholog5217.XP_007005180.1
Seed ortholog evalue3e-11
Seed ortholog score76.6
Taxonomic scopeFungi
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936299.0994086-UTR-E-siliculosus-1a_M_contig85:149034..1491431622936299.0994086-UTR-E-siliculosus-1a_M_contig85:149034..149143Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig85 149035..149143 +
1696251014.5153883-UTR-E-siliculosus-1a_M_contig85:149034..1491431696251014.5153883-UTR-E-siliculosus-1a_M_contig85:149034..149143Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig85 149035..149143 +
1622936299.113575-UTR-E-siliculosus-1a_M_contig85:149579..1496091622936299.113575-UTR-E-siliculosus-1a_M_contig85:149579..149609Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig85 149580..149609 +
1696251014.528982-UTR-E-siliculosus-1a_M_contig85:149579..1496091696251014.528982-UTR-E-siliculosus-1a_M_contig85:149579..149609Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig85 149580..149609 +
1622936299.2051167-UTR-E-siliculosus-1a_M_contig85:155027..1563261622936299.2051167-UTR-E-siliculosus-1a_M_contig85:155027..156326Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig85 155028..156326 +
1696251014.5820544-UTR-E-siliculosus-1a_M_contig85:155027..1563261696251014.5820544-UTR-E-siliculosus-1a_M_contig85:155027..156326Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig85 155028..156326 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936299.1255054-CDS-E-siliculosus-1a_M_contig85:149609..1496961622936299.1255054-CDS-E-siliculosus-1a_M_contig85:149609..149696Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig85 149610..149696 +
1696251014.538838-CDS-E-siliculosus-1a_M_contig85:149609..1496961696251014.538838-CDS-E-siliculosus-1a_M_contig85:149609..149696Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig85 149610..149696 +
1622936299.1377466-CDS-E-siliculosus-1a_M_contig85:151036..1511821622936299.1377466-CDS-E-siliculosus-1a_M_contig85:151036..151182Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig85 151037..151182 +
1696251014.5491734-CDS-E-siliculosus-1a_M_contig85:151036..1511821696251014.5491734-CDS-E-siliculosus-1a_M_contig85:151036..151182Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig85 151037..151182 +
1622936299.1550937-CDS-E-siliculosus-1a_M_contig85:152352..1524911622936299.1550937-CDS-E-siliculosus-1a_M_contig85:152352..152491Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig85 152353..152491 +
1696251014.5597782-CDS-E-siliculosus-1a_M_contig85:152352..1524911696251014.5597782-CDS-E-siliculosus-1a_M_contig85:152352..152491Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig85 152353..152491 +
1622936299.1758199-CDS-E-siliculosus-1a_M_contig85:154139..1550271622936299.1758199-CDS-E-siliculosus-1a_M_contig85:154139..155027Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig85 154140..155027 +
1696251014.5708098-CDS-E-siliculosus-1a_M_contig85:154139..1550271696251014.5708098-CDS-E-siliculosus-1a_M_contig85:154139..155027Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig85 154140..155027 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig85.16589.1prot_E-siliculosus-1a_M_contig85.16589.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig85 149610..155027 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig85.16589.1

>prot_E-siliculosus-1a_M_contig85.16589.1 ID=prot_E-siliculosus-1a_M_contig85.16589.1|Name=mRNA_E-siliculosus-1a_M_contig85.16589.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=420bp
MGYDRRGEDNSFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARA
AGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLS
LGEGMGVATVVNVHLGNEGDTEKQVTGLLSLLEDLRSGDLRTRDLRKRDD
VRRDQQHIPKTSNQRRRKLRRKEEGEHLAVRGLDEDRRLLIVVGDFNFES
TSSGYRRMVSEGGLRSAANVSTEAAAAEATGWFPPATASDFPAMGPNYPA
NVYHAAPKLADDGVVPEKREVLRSFLGDGAAAVNAGDGVAGGVVNDGHGD
DALGVVSGGGSVVDDVISDDRNAVGGVSVRVGGDGYGGDASAAAAAAAVG
EGGNESGDTVVAGDADNSGALDFVFFSAGGGGISCRSYEVHREFSQERYA
DGYPSVAEFEVSCPSLAPE*
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mRNA from alignment at E-siliculosus-1a_M_contig85:149035..156326+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig85.16589.1 ID=mRNA_E-siliculosus-1a_M_contig85.16589.1|Name=mRNA_E-siliculosus-1a_M_contig85.16589.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7292bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig85:149035..156326+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TCAAGGCCCGGTTTCGAGCTCCGCGGGGACGGTGGATTTGGACGGGCTTG
CTGGCGGGAGGCGCGATTTGCGTGCCGCCGGCAGCGAGCTTGCGGATGCA
ACGTCTGAGGTAACTACGATAGAACACCGCCACCAATCGCAATCACAATC
CACAACCACAGCCACAACCACAACACCGACAACAACAACGACAACAACAA
CAATAACGACCAAAGCAATGTTGCTGTGGCAGAATCGTGCTTGCAGTGTT
TGGTGTCAGGATAAATCACAGCTCAGCCGGTGGCGAGGGCACGCTCTCCC
TACTGCTCCGAACAGCAATCGCGTCGGCACAGGGCCGGTCCAAATCGATC
AGTTTCATTCTTGTACCAACGTCAAACCAACCCGCAGGCGGTGAGGGCGG
TGAACTTCACAGCGTGTGGGTACGGGTCGATCCAATCAAAATCTGTTTTC
ATAGCTTTACCGACAAGAACAGTCCAGAAATGAGGGTGGGAACCGGGTTC
GATCCGATGAGTTTCATTGTCGTACCAAAATCAACCGGCCAGCAGGCGGT
GACGGTGGTGAACTTCAACGTGTACATGGGCTACGACCGAAGGGGGGAGG
ACAATTCCTTCCGGGTGGGCAGGCTTCTGAAGGACCTTGAGGCCGACATT
GCCGGATTGCAGGTGAATATCGTTTTTGTTGTTCAATTTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTGGTTGTTGCTGCTGGTGTTTGTTGTGATTGA
TGTTGTTGTCGTTGTCGTTGTTGTTGTTGTTGTCGCCCTTGCGAATCGCG
TGCCCGCCTAGCACAGAGGGATGTCTCGCAGTTTTAGGAGTGTCACGGTT
TCAGGTTCCGCGATCGCCACCCTCAGCAGCAACAGACTCGACGATCCAGG
CATCGTTTCTGCCCTTTGTCCTCGAGCGCGCTGCTCTGCAGAGGACGAAA
ACATTCCCCGAGCCGCGGCCAAAGAGTTCTGGGGTGTCTGTTGGTAGGTT
AAGTGGAGGGCCCTCAATCCGTCGGTTTATGCCCGGACCATCGACCGGCA
CTATTCAGAGGGACCGGCGCTATTCAATCGATAGAATTACTCGGTGATTC
AGTCTGTGAACAGCAATTTCACCGGCGCTTTACTGGGCCACCGGCGCCTA
TTATTTGGCGATATTGACGCCCTCCCCACTGTAAGAATATCCCCACACCT
AGGGAGGAACCGATCGGATCAACGCTCTACGTATGCACCGTAGGTGACAC
CACGCAAGATATCACACCCTTCCCTGGGAGTAATGCTTCGTGGACGCGTG
GTCAAGGGTCTATCCGCTAAGGCGCGCAAACCATGCGTACCCCTCTAATA
TTCCGCCGTCTCGGTTGGGTTGTAGGAAACCGGGCTGATGCCACTACAAC
ATCCAATCCAGTGCAACTCCCCCCGCCCAATGCGCTCCCTGGGAACATTG
CTCCGTGCTCTCGAGGACGCGTGGTCAATGATCTAACCGTTAAGGCATGC
AAGCCACGAGTACGCCCCCCCCCCCCTCCAAAATGGAAACCATCGCATGG
TAGGTAACACAATGCTCCGGCCTCTCGAGGATGCGTGGTCAATGGTCCTA
ATACGTAGGGCATGCAACACATGCACACGCTACCCTTGCTATTTCTATTT
CCCCCCCAACAACTAAGGCATGCAAAACATGAGTACCCCCCCCCCCACCC
GAACCTCGTGATGTGAGAGCCTTCTCCGGCGAGAACCCGACGTGTCGCTC
CGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGCCAAACCACCACTTACT
AATTACGGCATGCACGGCTCGAAGTACACCCTGACCTCCCGCCCCTAAAC
ATACGAGCAATGGTTCGTGGAAGCATGGTCAATGGTCTAACCCGCTGTCT
CGGTTGAGTTGTAGGACACCGGGTTGATGCCACCACAACATCCAATCCAG
GGCAAGTCCCCCCGCCCCATGATATCACCATATTGGTCGTATGCTTCTTT
AGGAAACCGGGCTGATGCGATTGACCCTGGGCAACCGGCACTACGCCGGG
GCGGTGGCGAGGGCTGCGGGGATGGTGCTGGCCGCGGCGGCGCCGGTGGC
GGAGGACACCTGGGGCTGCGCGATCTTGTCGCGCCTTCCGGTGCTCAGGT
GGGCACACAGATGAGGCAGTCAAGTCATACACACGTTTTTCTTTTTTTTA
TTTCACGTTTTGTGGGCCCGTTTTTTCTTTTGTGTGTGTCTTAAATATTA
GCATCGTCCGCGCTGACCGGCTGACCAATGAAAAACCGTCAGTCCTCAGT
GCGGTGTGTGTGTGCGTGTTTTAGGCGGTGTGCTGGTGCTCGGATGCGCA
CTTAAGATGAGGCAGTCGAGTCAGTCGTTCAGTGTGTCGCTTCCGCACGT
TTCTGTTTTTATTTTTTGTTGCACGTGCGGCGGGCCGTGTTTGTCTGTTT
TCATTTTAGGCCGTGTGTGCGTTGCCAACAAACTATAATTGTTTGCGTAA
GAGTTGATGAAACACCACACACACAGAGATATGGTATGATGAAGCTCTCT
CGTTGTACGTACTTGTCTTTGTTTTTCGTTGTACCGTCCGCCTGCGCGTA
CCGTACGTTCGGCAAAAGAGAACCCCCCCATATAAGATCACACAGCCCCC
TACACCGATATTATATTTTTTCTACCCCAAGTTACCCCTGGGGTGTGTCT
TCTTGCATCGTACCACGGTACGTACCACGGTACGTACCACCGTACGGTAC
AGTTGTGCACCGTATACGGCACAAGATAGCACCCTCTCACACAGTGTAAA
CACCCGAGAATAATATTTTTTTCATCCAAAAAGTTTATCCCCGGGATGTA
TTTTCTTTCGTCGTTTACGGTACTCAACCTGTGAAAAACCTCTCCAGTGG
AAAGTACCGCAGGAGGGAGGGGTGGATGGGGGCCTCAGGGAGAGGAACCC
TTCTCGGGTTGGAGAAAACAGCACAACAAGTGCTGTCAGCGCTGATCTGA
AACGAAGACAACAAAAAAACAAGAAAGAATGTCGAACCTGTTGCAGCCTG
GCGCAGACAGCCCATGCCGTCGTACATCGACGACGCTCGGTTCACACGTG
CCGGAAGATGCTCGAGAACATTGCCCCGCTCTTACCATATCTTATCGTGT
TGATAGGCCTGTACTCCGTATTTTTTTTTTTTTGCGATTTAGGTATACTA
TCTTTCCTCCATCATTTTCAGTTTACCAAAAAAAATCGACAGCGAAAATA
TCAGGAAATCGCCTACGGAGTACAGGCCTAAAGCCGTTTTGATTTCTTGC
CGCGGCGTGGTTTTGCAGCTGGGGGTGGAGGAGGCTTCCGAGGGGCCCGG
GGGAGAACGCCTGCGAAGTTCACGCCACCCTGTCGCTGGGGGAGGGGATG
GGGGTCGCGACCGTTGTCAATGTGCACCTCGGCAACGAGGGCGATACAGA
AAAACAGGTAGGTGAAAATGTTTGTACAGTGTTTAGTGGGCCGGCCCTGA
ATAGTAGGGCAATACCGAAAAACAGGTAAGGTGGAAACGTTTGGACAGTG
ATGGCCGGCCCTGTATAGTGCTGGTCGAATAGTGCCGGGTGCCCGGTGTA
GTGCCGGCGTCTTCGTCTCGCACACGCTGAAGTACCAAATGGTTCTGAGA
AAGGAGAGTGAGGGAAATGCAGCCAAACAGCCAAACAGTGGTCGTAGACC
CACATGCATGCTCGTGTCTCCTCCGAACCCTCTCTCGTCCGCCTTTTTTC
TAGAAGACGAACGGGTAAGATCACCGAACCCGAAAGACGCGAAAAAGCCT
TGGAGCAATACACCGAGGTTTTCTTCCGCGTAGACGTACAACCTGGGCCG
ACGAAGAAGCTATTACACACTCGCTCGTCCCGCCGTAACTTTAATTGATA
CACATTTCTAGCGGAACCGGTGCAGGAGGCCCCACCCAACCTTACATTGG
ATGATGTGGGTAAGGGACAAGAATATACCATAATCTCTGATTTGAAACGA
ATCCAGATTTCGGAACGAAATCGGGAAGAGGCAGATATCCCATGAAGCAT
GTTGAAAATGAGGACTCTACGTTGTTCAGCCCCCTTTCTCTCTACCCCAA
TACGCCGGAGTAGAGGAGAAAGAAAATATTTGGGACCACCCCACCCGCCG
TAGTAATACTTATTCTGGTCAGGAACTTGCGGTTCCTTCAAACGCTTTAT
GTCCGGGCATAAAGCCGTGCGCCCAGCCCAAAGAATTTGTTCACGGCGAG
GCCCTCCTGTCGGTGCAGGAGGCCTCACCCAACCAAATCCAATACTTGTA
TTGAATGATCTGGGTGAGGGACAAGCATACAGCAGGAAACGTGCAAGAGC
GAAAAGAACCCGATTGCCGTAGATGAGGCAAGAAGCACACACCCCCGTTG
GAACGATTTTCAAGGCTCGATGTCCGTCCGCACAGTAGAATGAGCGGCAG
CGCCGACAAATGGTGACGTTGAGGAGCCGTCTCATCCGGAGCGTTCCGAC
AACGTAGTATCGTTTCATTTGCCCGTAATCTTCCATCGTGGAGTAGAAGT
CGAGCTTTGAAAATCGGTCCGGGGTGTGTGTAATCTTCCGTCACCTACGG
TGTGCTAGCGGTTTCTCTACCTCGGAGTAGAGTTGGTGTTCCATCCCCTT
CTCCTGACGGATGCGTGGAATAGCCATCACCTCCCTTCAAGTAGACGGGA
AAGTCGCAAATGAGGATGCTCATTCTCCCTGCCCCCCATCCTACACTGTC
TGAAGACTTTTCTCGACCATGCGGGGAAAATTGAAATTTGCACCCTGCCC
CACTCAGAAGGATTTGGCCATCGGTGAGTTGGTCTTGTGGGAACAATGCT
CCGTCCTCTAGACGACGCGTGGTCAAAGGGTCCAACAAACAGCTACATAT
GGCGTGCAAACAAAACATGAGTACGACCTCCCGCCAGTCGTAAGGTTCGT
ATCTTTACGGCCGAGCCAGGCCGACAACAACGATCTCACCGAACAAGAAT
ATTCCTCGAAGTCATCCCCCGAACACCCGCACTCCCCGACATGTCCACAC
TCGTCCCCCGTCGCTTTCCTCATCGTCGTTTCTCCCGTTCGCCTCTTTTT
GTTAGGTGACCGGTCTCCTGTCGCTGCTGGAGGATCTCCGCTCAGGAGAT
CTACGAACGAGAGATCTACGAAAGCGAGACGACGTCCGCAGAGACCAACA
ACATATACCGAAGACGAGCAACCAGCGACGGCGGAAACTCCGAAGAAAAG
AAGAAGGAGAACATCTCGCGGTACGCGGCTTGGACGAAGATCGGAGATTG
CTGATCGTTGTCGGAGACTTCAACTTCGAATCCACCTCGTCCGGTTACAG
GCGCATGGTATCCGAGGGCGGTCTTCGATCCGCCGCAAATGTTTCCACCG
AAGCAGCAGCAGCAGAAGCGACAGGCTGGTTTCCCCCCGCAACCGCTTCT
GATTTCCCCGCAATGGGTCCGAATTACCCCGCGAATGTCTATCACGCCGC
ACCGAAACTAGCCGACGATGGCGTCGTCCCCGAGAAACGCGAAGTGCTTC
GGAGCTTTCTCGGTGACGGTGCTGCCGCTGTCAACGCCGGCGACGGTGTC
GCAGGTGGTGTTGTAAACGATGGTCACGGCGATGATGCTCTAGGTGTCGT
TAGTGGTGGCGGTAGTGTTGTTGATGACGTCATCAGCGACGATCGAAACG
CTGTCGGCGGCGTTTCGGTTCGCGTCGGTGGCGATGGATACGGCGGAGAT
GCTTCTGCTGCTGCTGCAGCAGCAGCTGTTGGAGAGGGGGGCAATGAGAG
TGGTGACACCGTTGTTGCCGGAGACGCTGACAACAGCGGCGCCCTAGATT
TCGTGTTCTTTTCCGCCGGAGGCGGCGGAATCTCGTGCCGGAGCTACGAG
GTCCATCGAGAGTTTTCCCAGGAACGGTACGCGGACGGGTACCCCTCCGT
TGCCGAGTTCGAGGTCTCGTGCCCCTCACTCGCGCCTGAGTGACCAGCAC
GCAATCAAACACAGGAGGAGTAACTCGGAGCGGTGCATGTTGTAAAGCAC
GATGACCACTTGCACTTTCAGCGGGCACGATGACTGGTAGTTTTCCCAGG
AGCGGTACGCGGACGGCTACCCTTCCGTCGCGAGTTCGAGGTCTCGCGCC
CCTCCCTGGCGCTGGAGTGACCACTATGCGAGCACGGGAGGAGGAGCGGT
GCATGTTGAAAAGCACGATGGTCACTGAACTACCAGCGGGCACGATGACT
CGTAGTTTTCCCAGGAGCGGTACGCGGACAGCGACCCTTCCGTCCCCGAG
TTCTGAGGTCTCCCGCCCCTCCCTGGCGCTGGAGTGAGCAAAACGCAATC
AAACACAGGAGCAGCGATGCGTAGCGGTATATATATGGTGAAAAGCACGA
TGACCACGTTGATCAGTCGGCCGCTGAACGGCAGTCCAGTGGTTTTTCAC
GTGGTTCACCACGGTGCTTCCGAGCGTTTTCTCTATGTCGCGATAAGTTC
CTGAGGAGTCAGAGCGGTGGGCTCTTCTGCTTTCTGCCTCTTCTGGCTGT
TTACTGTAATTCTTGTACCCGGCGGCATGTAGATACGTCATTGGTACAGT
ACGGATAATTTGGAAGGTAGTGAGCGGAGACCAGGACGACTTTTGGCGTG
AACACGACAACAACAACAGCAACAACTTGGTTCGTGTGTGTCCGGCGTTG
ACAACTAGCATCACTTTTCTTCTTTTTTCTTTTGTGGACACAGCATTGGT
CGACTGCTGCCAAGCCCCCAACCGACGGCTAACTTAGTGAGAAAATATGT
TGCCAATCCTTTCGCCTGCCTTATCAAACGCCCCCCTCGTGTTGGTCTGC
ACGCAAGCGGCGTTTTTGTTCGGGCTCGCCGAAGCGAAGACACCAAGCGT
GTGTGGCAGATAAATGTAGCGTGCACTGTAGTTTTGTTCCGGCAGATGGC
GCAGGCATGGGGTACGTGGCAGATAGATGTGGCATGCAGCTTTCGGTTTC
AGGCATATAGTGAAGGCATCGGGGGTGCGGCAGACAGGACTAGCAAGACG
AGTTTGGAGGCGCTTCAGGGGGACCTCGGCGCGAAAACGAACGGCCTATA
TCCCCTCGTGGCCAACGGCACACAGCAGCATGTTTCAACGTCGAACACCA
TGTGCCATCTACTGCTATGATAGTGTAGGCGTCGACATGTGAGTGAGTTC
AAATGAATATGTGCGGTAGGACTTGAGCTGGCTCTTCCAGCCGAAGGGCT
TTGCCCTTGAGGCTATCCAAGCGAGGCCGTCGTTTATTCTCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig85:149035..156326+

>mRNA_E-siliculosus-1a_M_contig85.16589.1 ID=mRNA_E-siliculosus-1a_M_contig85.16589.1|Name=mRNA_E-siliculosus-1a_M_contig85.16589.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2520bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig85:149035..156326+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGGCTACGACCGAAGGGGGGAGGACAATTCCTTCCGGGTGGGCAGGCT
TCTGAAGGACCTTGAGGCCGACATTGCCGGATTGCAGATGGGCTACGACC
GAAGGGGGGAGGACAATTCCTTCCGGGTGGGCAGGCTTCTGAAGGACCTT
GAGGCCGACATTGCCGGATTGCAGGAAACCGGGCTGATGCGATTGACCCT
GGGCAACCGGCACTACGCCGGGGCGGTGGCGAGGGCTGCGGGGATGGTGC
TGGCCGCGGCGGCGCCGGTGGCGGAGGACACCTGGGGCTGCGCGATCTTG
TCGCGCCTTCCGGTGCTCAGGAAACCGGGCTGATGCGATTGACCCTGGGC
AACCGGCACTACGCCGGGGCGGTGGCGAGGGCTGCGGGGATGGTGCTGGC
CGCGGCGGCGCCGGTGGCGGAGGACACCTGGGGCTGCGCGATCTTGTCGC
GCCTTCCGGTGCTCAGCTGGGGGTGGAGGAGGCTTCCGAGGGGCCCGGGG
GAGAACGCCTGCGAAGTTCACGCCACCCTGTCGCTGGGGGAGGGGATGGG
GGTCGCGACCGTTGTCAATGTGCACCTCGGCAACGAGGGCGATACAGAAA
AACAGCTGGGGGTGGAGGAGGCTTCCGAGGGGCCCGGGGGAGAACGCCTG
CGAAGTTCACGCCACCCTGTCGCTGGGGGAGGGGATGGGGGTCGCGACCG
TTGTCAATGTGCACCTCGGCAACGAGGGCGATACAGAAAAACAGGTGACC
GGTCTCCTGTCGCTGCTGGAGGATCTCCGCTCAGGAGATCTACGAACGAG
AGATCTACGAAAGCGAGACGACGTCCGCAGAGACCAACAACATATACCGA
AGACGAGCAACCAGCGACGGCGGAAACTCCGAAGAAAAGAAGAAGGAGAA
CATCTCGCGGTACGCGGCTTGGACGAAGATCGGAGATTGCTGATCGTTGT
CGGAGACTTCAACTTCGAATCCACCTCGTCCGGTTACAGGCGCATGGTAT
CCGAGGGCGGTCTTCGATCCGCCGCAAATGTTTCCACCGAAGCAGCAGCA
GCAGAAGCGACAGGCTGGTTTCCCCCCGCAACCGCTTCTGATTTCCCCGC
AATGGGTCCGAATTACCCCGCGAATGTCTATCACGCCGCACCGAAACTAG
CCGACGATGGCGTCGTCCCCGAGAAACGCGAAGTGCTTCGGAGCTTTCTC
GGTGACGGTGCTGCCGCTGTCAACGCCGGCGACGGTGTCGCAGGTGGTGT
TGTAAACGATGGTCACGGCGATGATGCTCTAGGTGTCGTTAGTGGTGGCG
GTAGTGTTGTTGATGACGTCATCAGCGACGATCGAAACGCTGTCGGCGGC
GTTTCGGTTCGCGTCGGTGGCGATGGATACGGCGGAGATGCTTCTGCTGC
TGCTGCAGCAGCAGCTGTTGGAGAGGGGGGCAATGAGAGTGGTGACACCG
TTGTTGCCGGAGACGCTGACAACAGCGGCGCCCTAGATTTCGTGTTCTTT
TCCGCCGGAGGCGGCGGAATCTCGTGCCGGAGCTACGAGGTCCATCGAGA
GTTTTCCCAGGAACGGTACGCGGACGGGTACCCCTCCGTTGCCGAGTTCG
AGGTCTCGTGCCCCTCACTCGCGCCTGAGTGAGTGACCGGTCTCCTGTCG
CTGCTGGAGGATCTCCGCTCAGGAGATCTACGAACGAGAGATCTACGAAA
GCGAGACGACGTCCGCAGAGACCAACAACATATACCGAAGACGAGCAACC
AGCGACGGCGGAAACTCCGAAGAAAAGAAGAAGGAGAACATCTCGCGGTA
CGCGGCTTGGACGAAGATCGGAGATTGCTGATCGTTGTCGGAGACTTCAA
CTTCGAATCCACCTCGTCCGGTTACAGGCGCATGGTATCCGAGGGCGGTC
TTCGATCCGCCGCAAATGTTTCCACCGAAGCAGCAGCAGCAGAAGCGACA
GGCTGGTTTCCCCCCGCAACCGCTTCTGATTTCCCCGCAATGGGTCCGAA
TTACCCCGCGAATGTCTATCACGCCGCACCGAAACTAGCCGACGATGGCG
TCGTCCCCGAGAAACGCGAAGTGCTTCGGAGCTTTCTCGGTGACGGTGCT
GCCGCTGTCAACGCCGGCGACGGTGTCGCAGGTGGTGTTGTAAACGATGG
TCACGGCGATGATGCTCTAGGTGTCGTTAGTGGTGGCGGTAGTGTTGTTG
ATGACGTCATCAGCGACGATCGAAACGCTGTCGGCGGCGTTTCGGTTCGC
GTCGGTGGCGATGGATACGGCGGAGATGCTTCTGCTGCTGCTGCAGCAGC
AGCTGTTGGAGAGGGGGGCAATGAGAGTGGTGACACCGTTGTTGCCGGAG
ACGCTGACAACAGCGGCGCCCTAGATTTCGTGTTCTTTTCCGCCGGAGGC
GGCGGAATCTCGTGCCGGAGCTACGAGGTCCATCGAGAGTTTTCCCAGGA
ACGGTACGCGGACGGGTACCCCTCCGTTGCCGAGTTCGAGGTCTCGTGCC
CCTCACTCGCGCCTGAGTGA
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