prot_E-siliculosus-1a_M_contig84.16564.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig84.16564.1
Unique Nameprot_E-siliculosus-1a_M_contig84.16564.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length366
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig84.16564.1 vs. uniprot
Match: D7FWZ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWZ2_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 2.740e-54
Identity = 147/182 (80.77%), Postives = 148/182 (81.32%), Query Frame = 0 
Query:   38 MDGSRGATGAVDVGVSHLNMNINVIGGGHGLGSGLSAGDKSAAGDSTVSXXXXXXXXXXXXXXXXXXXXXXXXXXGLPSGRSRSPGFDVDKPTSSSSPGETXXXXXXXXXFL-AGATVVTGSAPGAEGXXXXXXXWLGAGDGFAGSAAVGA----DSGNNVDHAFAGAMLQRSTSAPPVSDH 214
            MDGSRGATGAVDVGVSHLNMNINVIGGGHGLGSGLSAGDKSAAGDSTVSXXXXXXXXXXXXXXX           GLPSGRSRSPGFDVDKPT+       XXXXXXXXX   AGATVVTGSAPGA  XXXXXXXWLGAGDGFAGS          S NNVDHAFAGAMLQRSTSAPPVSDH
Sbjct:    1 MDGSRGATGAVDVGVSHLNMNINVIGGGHGLGSGLSAGDKSAAGDSTVSXXXXXXXXXXXXXXXMATSSSNG---GLPSGRSRSPGFDVDKPTTXXXXXXXXXXXXXXXXXXXAGATVVTGSAPGAXXXXXXXXXWLGAGDGFAGSXXXXXXXXXSSSNNVDHAFAGAMLQRSTSAPPVSDH 179
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig84.16564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWZ2_ECTSI2.740e-5480.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig84contigE-siliculosus-1a_M_contig84:652115..664558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig84.16564.1mRNA_E-siliculosus-1a_M_contig84.16564.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig84 652115..664559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig84.16564.1 ID=prot_E-siliculosus-1a_M_contig84.16564.1|Name=mRNA_E-siliculosus-1a_M_contig84.16564.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=366bp
TISAVSSVRPRCVPTHPRLTHASRRGFQQGSKQASRKMDGSRGATGAVDV
GVSHLNMNINVIGGGHGLGSGLSAGDKSAAGDSTVSSSPPVAAAAAFGSS
AAMATSSSNGGGGLPSGRSRSPGFDVDKPTSSSSPGETTASSAAAAAFLA
GATVVTGSAPGAEGARGGGGGWLGAGDGFAGSAAVGADSGNNVDHAFAGA
MLQRSTSAPPVSDHVDGWARRGVAPLAPDASAVDSDYYYYYHAPTSINPR
MAGASRDSSGGSGSGGAGSGGSTASKILAAPIAQSHAHNLLDKAMPTSAS
RDGATGSGSGRSSPLTTVAEQQLKPNGSAGAASGSSGDEAGAASRAQGGG
GGGGTMAIGSNGPPAG
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