mRNA_E-siliculosus-1a_M_contig84.16558.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig84.16558.1 vs. uniprot
Match: D8LQ23_ECTSI (Exostosin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ23_ECTSI) HSP 1 Score: 1713 bits (4436), Expect = 0.000e+0 Identity = 919/1064 (86.37%), Postives = 929/1064 (87.31%), Query Frame = 3
Query: 342 MLPYSPGSRGGGN-----DPCSIIKRVSSSKRGGCGCCRTVNLVSRRTFVFVFAAGLLGAALVLLLSAGDRDRSSSLSSSLPSTSATTGFKATIPPGSQQQSGLQELQGGGDTSPSSTPETSGGIAQEEXXXXGEGGDKPKITVRQAEGRGAGGGKVSVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERADMAQDMGEIWLHRAMLAHPWRVLNPEEADLFYVPMYPILSMKLGNDRCGDKTHDELINTSVEYLALSSVYFRRFGGADHALVCAWWNCRGALGPKPRMLLRRTVVGINEKMLGWTRWGCGLDKMVTIPYTASSVLTTSEMIGGRAAEDRDIPFFFVGTARGRPERQNLDVVTGMAEGSVMMLGDHQSDWGMNSTQYAAHIARSSRFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQDALSRSEAEVEQLREGGRRGMSALLYGVTMGKEIGDMRPFLGTATKFVRASYALAGGGGTEGEGRSADMWTCNRYDPMGEEIDAAPRTTAKLPPPAGATRQWLAETETIVNVERSLLFCAPPNTGSLQFRMLAKRMQGLPHWAVSNDRSLLFDREPSGLELLDATDGHLMEEIYQENGSGWIKIGLVRDPVTRLLSAYLDLADRWREALSPPGXXXXXXXXXXXXXHDRRRLRQSPDEGEPTGEDDGRHRQQGGSRGHAPLTGSEWDLFDAIVDRRRRRRQWGQRGPGPRQEEENERIAYEGLQDSGRGGGSXXXXXXXXXXXXXSRNEGTDNQXGADASGGRGADVRLLQGERRTDAADQRAKVNSDDGREVSPEQHQQRHRDMEEEGERRFFWQGPGSWDGPEAAGEDGGDRSAVGGXXXXXXXXXGGVPTFVEVVETLKADVWGGPVAFRPAVSLCGQRNSPFDSVIPFERLQKTSTELVKSLPGDIWEAFGKSGWGPEGQHAFMEFDYGRNARRRQGGPVGEESQRPEGNDKDEPLPPRARDLFDGEDLCAWAEYYTDLETLETVGKIYELDYIYYRWYRLDPWRERLQACLAAKR 3518
MLPYSPG+RG DPCSIIK VSSSKRGGCGCCRTVNLVSRRTFVFVFAAGLLGAALVLLLSAGDRDRSSSLSSSLPSTSATTGFKATIPPGSQQQS LQEL+G XXXXGEGGDKPKITVRQAEGRGAGGGKVSVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERADMAQDMGEIWLHRAMLAHPWRV NPEEADLFYVPMYP+LS KLGN+RCG KTHDELINTSVEYLALSSVYFRRFGGADH LVCAWWNC+ ALGPKPRMLLRRTVVGINEKML WTRWGCGLDKMVTIPYTASSVLTTSEMIGGRAAEDRDIPFFFVGTARGRPERQNLDVVTGMAEGSVMMLGDHQSDWGMNSTQYAAHIARS RFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQDALSRSEAEVEQLREGGRRG+SALLYGVTMGKEIGDMRPFLGTATKFVRASYALAGGGGTEGEGRSADMWTCNRYDP GEE+DAAPRTTAKLPPPAGATRQWLAETETIVN ERSLLFCAPPNTGSLQFRMLAKRMQGLPHWAVSNDRSL+FDRE SGLELLDATDGHLMEEIYQENGSGWIKIGLVRDPVTRLLSAYLDLADRWREALSPPGXXXXXXXXXXXXX GGSR HAPLTGSEWDLFDAIVDRRR NE IAYEGL DSG SRN X LLQGERRTDAADQ K N+DDGREVSPE H RHR+MEEEGERRFFWQGPG WDGP AAGEDGGDRSAVGGXXXXXXXXX VPTFVEVVETLKADVWGGPVAFRPAVSLCGQRNSPFDSVIPFERLQKTSTELVKSLPGDIWEAFGKSGWGPEGQHAFMEFDYGRNARRRQGGPVGEESQRPEGNDKDEPLPPRARDLFDGEDLCAWAEYY DLETLETVGKIYELDY YYRWYRLDPWRERLQACLAAKR
Sbjct: 1 MLPYSPGNRGXXXXXXXXDPCSIIKSVSSSKRGGCGCCRTVNLVSRRTFVFVFAAGLLGAALVLLLSAGDRDRSSSLSSSLPSTSATTGFKATIPPGSQQQSDLQELRGXXXXXXXXXXXXXXXXXXXXXXXXGEGGDKPKITVRQAEGRGAGGGKVSVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERADMAQDMGEIWLHRAMLAHPWRVANPEEADLFYVPMYPVLSTKLGNNRCGGKTHDELINTSVEYLALSSVYFRRFGGADHTLVCAWWNCKSALGPKPRMLLRRTVVGINEKMLEWTRWGCGLDKMVTIPYTASSVLTTSEMIGGRAAEDRDIPFFFVGTARGRPERQNLDVVTGMAEGSVMMLGDHQSDWGMNSTQYAAHIARS-RFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQDALSRSEAEVEQLREGGRRGISALLYGVTMGKEIGDMRPFLGTATKFVRASYALAGGGGTEGEGRSADMWTCNRYDPKGEEVDAAPRTTAKLPPPAGATRQWLAETETIVNEERSLLFCAPPNTGSLQFRMLAKRMQGLPHWAVSNDRSLVFDREASGLELLDATDGHLMEEIYQENGSGWIKIGLVRDPVTRLLSAYLDLADRWREALSPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSRDHAPLTGSEWDLFDAIVDRRRXXXXXXXXXXXXXXX--NEGIAYEGLHDSG--------GVFDGEGGSGSRNXXXXXXXXXXXXXXXXXXXXLLQGERRTDAADQPVKANNDDGREVSPEHHPLRHREMEEEGERRFFWQGPGGWDGPGAAGEDGGDRSAVGGXXXXXXXXXX-VPTFVEVVETLKADVWGGPVAFRPAVSLCGQRNSPFDSVIPFERLQKTSTELVKSLPGDIWEAFGKSGWGPEGQHAFMEFDYGRNARRRQGGPVGEESQRPEGNDKDEPLPPRARDLFDGEDLCAWAEYYNDLETLETVGKIYELDYTYYRWYRLDPWRERLQACLAAKR 1052
BLAST of mRNA_E-siliculosus-1a_M_contig84.16558.1 vs. uniprot
Match: A0A6H5JMN7_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMN7_9PHAE) HSP 1 Score: 677 bits (1746), Expect = 2.460e-228 Identity = 402/850 (47.29%), Postives = 479/850 (56.35%), Query Frame = 3
Query: 1029 LGNDRCGDKTHDELINTSVEYLALSSVYFRRFGGADHALVCAWWNCRGALGPKPRMLLRRTVVGINEKMLGWTRWGCGLDKMVTIPYTASSVLTTSEMIGGRAAEDRDIPFFFVGTARGRPERQNLDVVTGMAEGSVMMLGDHQSDWGMNSTQYAAHIARSSRFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQDALSRSEAEVEQLREGGRRGMSALLYGVTMGKEIGDMRPFLGTATKFVRASYALAGG-GGTEGEGRSADMWTCNRYDPMGEE--IDAAPRTTAKLPPPAGAT----RQWLAETETIVNVERSLLFCAPPNTGSLQFRMLAKRMQGLPHWAVSNDRSLLFDREPSGLELLDATDGHLMEEIYQENGSGWIKIGLVRDPVTRLLSAYLDLADRWREALSPPGXXXXXXXXXXXXXHDRRRLRQSPDEGEPTGEDDGRHRQQGGSRGHAPLTGSEWDLFDAIVDRRRRRRQWGQRGPGPRQEEENERIAYEGLQDSGRGGGSXXXXXXXXXXXXXSRNEGTDNQXGADASGGRGADVRLLQGERRTDAADQRAKVNSDDGREVSPEQHQQRHRDMEEEGERRFFWQGPGSWDGPEAAGEDGGDRSAVGGXXXXXXXXXGGVPTFVEVVETLKADVWGGPVAFRPAVSLCGQRNSPFDSVIPFERLQ-----------KTSTELVKSLPGDIWEAFGKSGWGPEGQHAFMEFDYGRNARRRQ------GGPVGEESQRPEGNDKDEPLPPRARDLFDGEDLCAWAEYYTDLETLETVGKIYELDYIYYRWYRLDPWRERLQACL 3506
+ +CG THDEL++ SV+YL+ SS++F RFGGADH L+CAWW CR LGPK RMLLRRTVVGINE++ WTRWGCG KMVT+PYTASSVL TS+MIGGR AE RDIPFFFVGTARGRPER+NLDVV +A+GSV++L + S WGMNSTQYA H+ARS RFCF PRGDTESSRR+FDA+AAGCTPIVTEA+V +LPFS+ S AE+E+L+EGGRR + LLYG+T G E+ D+ PF GTAT FVR +A T G +A N P R+ ++ P A R+WL E+ETIV +ERSLLFCA PNTGSLQFRMLAKRMQG+PHW VSN+RSLLFDRE S L L+D TDG M+EIY +NGSGWIKI +VRDPVTRLLS+YLDL D+WR L L Q P DA V R+R Q G Q + E AYE +SG+ G N+ G DA VR VPT VEV+E ++ DVW PVAFRP SLCGQR+SPFDSVIPFERLQ KTSTE+VKSLPGD+WEAFGKSGWGP+G+HAFM+FDYGR A R + G VG +Q EGN+ + LP ARDLF+G++ CAW EYY+DL L+ VG +YE+DY +YRWYRLD W+E+ + CL
Sbjct: 1 MNEPQCGGLTHDELMDASVDYLSSSSLFFNRFGGADHVLMCAWWGCRNGLGPKHRMLLRRTVVGINERVFLWTRWGCGPRKMVTVPYTASSVLATSDMIGGRTAEARDIPFFFVGTARGRPERENLDVVADIAKGSVVILDNLPSRWGMNSTQYAEHMARS-RFCFSPRGDTESSRRLFDAIAAGCTPIVTEATVPMLPFSQ---------------------------------SAAELEKLQEGGRRVANKLLYGITEGPELSDIHPFFGTATNFVRERAEVARFLPSTGGPSDAAKKGVMNNLFPHRGRGYFSVGGRSILEIAPAARTGILIGREWLTESETIVVMERSLLFCAAPNTGSLQFRMLAKRMQGIPHWGVSNNRSLLFDREASELTLVDTTDGQSMKEIYSDNGSGWIKIAVVRDPVTRLLSSYLDLVDKWRAGLI---------------------LHQQPPHN------------------------------DAQVRRQR------QLGLSLEQSDGREDKAYEFSHNSGQSG----------------------NRDGGDA-------VR----------------------------------------------------------------------------------VPTLVEVLEAVRTDVWSAPVAFRPVSSLCGQRSSPFDSVIPFERLQTSYAYAVMMMQKTSTEVVKSLPGDVWEAFGKSGWGPDGKHAFMDFDYGRGAWRGEVTNGGGGEAVGGGAQTAEGNNMRDTLPRHARDLFEGKNPCAWTEYYSDLGILDAVGVVYEMDYTHYRWYRLDVWKEKFKDCL 648
BLAST of mRNA_E-siliculosus-1a_M_contig84.16558.1 vs. uniprot
Match: A0A6H5KWD0_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWD0_9PHAE) HSP 1 Score: 452 bits (1163), Expect = 1.830e-146 Identity = 214/307 (69.71%), Postives = 254/307 (82.74%), Query Frame = 3
Query: 945 MLAHPWRVLNPEEADLFYVPMYPILSMKLGNDRCGDKTHDELINTSVEYLALSSVYFRRFGGADHALVCAWWNCRGALGPKPRMLLRRTVVGINEKMLGWTRWGCGLDKMVTIPYTASSVLTTSEMIGGRAAEDRDIPFFFVGTARGRPERQNLDVVTGMAEGSVMMLGDHQSDWGMNSTQYAAHIARSSRFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQDALSRSEAEVEQLREGGRRGMSALLYGVTMGKEIGDMRPFLGTATKFVR 1865
ML+HPWRVL+PEEADLFYVP+YP+LS KL RCG TH+EL++ SVEYL+ SS +F RFGGADH L+CAWW C ALGPK RMLLRR VVGINE++L WTRWGCG KMVT+PYTA+SVLTTS+MIGGR AEDRDIPFFFVGTAR RPER+NLDVV +A+GSV++L D +WGMNST+YA H+ARS RFCF PRGDTESSRR+FDA+AAGCTPIVTEA+VAVLPFS+ LNYSDFAVVVD F TRE V +V++ LSR+ E+E+L+E RR + LLYG+T G E+ D+RP+ GTAT F +
Sbjct: 1 MLSHPWRVLDPEEADLFYVPIYPVLSFKLATSRCGGLTHNELMDASVEYLSSSSPFFNRFGGADHILMCAWWKCGEALGPKHRMLLRRAVVGINERLLRWTRWGCGRSKMVTVPYTANSVLTTSDMIGGRTAEDRDIPFFFVGTARHRPERKNLDVVADIAKGSVVILDDLAWEWGMNSTEYAEHMARS-RFCFSPRGDTESSRRLFDAIAAGCTPIVTEATVAVLPFSQTALNYSDFAVVVDSAGFRTRESVKGIVREVLSRTSVELEELQESARRAANGLLYGITEGPELSDVRPYFGTATNFAK 306
BLAST of mRNA_E-siliculosus-1a_M_contig84.16558.1 vs. uniprot
Match: A0A6H5KW63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW63_9PHAE) HSP 1 Score: 397 bits (1019), Expect = 2.410e-124 Identity = 252/542 (46.49%), Postives = 287/542 (52.95%), Query Frame = 3
Query: 1911 RSADMWTCNRYDPMGEEIDAAPRTTAKLPPPAGATRQWLAETETIVNVERSLLFCAPPNTGSLQFRMLAKRMQGLPHWAVSNDRSLLFDREPSGLELLDATDGHLMEEIYQENGSGWIKIGLVRDPVTRLLSAYLDLADRWREAL----SPPGXXXXXXXXXXXXXHDRRRLRQSPDEGEPTGEDDGRHRQQGGSRGHAPLTGSEWDLFDAIVDRRRRRRQWGQRGPGPRQEEENERIAYEGLQDSGRGGGSXXXXXXXXXXXXXSRNEGTDNQXGADASGGRGADVRLLQGERRTDAADQRAKVNSDDGREVSPEQHQQRHRDMEEEGERRFFWQGPGSWDGPEAAGEDGGDRSAVGGXXXXXXXXXGGVPTFVEVVETLKADVWGGPVAFRPAVSLCGQRNSPFDSVIPFERLQKTSTELVKSLPGDIWEAFGKSGWGPEGQHAFMEFDYGRNARR------RQGGPVGEESQRPEGNDKDEPLPPRARDLFDGEDLCAWAEYYTDLETLETVGKIYELDYIYYRWYRLDPWRERLQACL 3506
RSADMWTC + EE APRT+A+LPP TR+WLAE+ETIV +E SLLFCA PNTGSLQFRMLAKRMQG+PHW+ SN+RSLLFDRE S LELLD TDG LM+EIY ENGSGWIKI +VRDPVTRLLS+YLDL D WR L PP H+RR L Q E EPT D ++ R GRGGG K + DD H + H S G A DG D + PT VEV+E LK DVW PVAFRP SLCGQR+SPFDSVIPFERLQKTSTE+VKSLPGDIWEAFGKSGWGP+G+HAFM+FDYGR A R R G VG +Q EGND +P P ARDLF+GE+ CAW EYY+DLE L+ VG +YE+DY +YRWYRLD W+ +L CL
Sbjct: 2 RSADMWTCP--ETRLEEEMLAPRTSAQLPPLTNETREWLAESETIVVMEPSLLFCAAPNTGSLQFRMLAKRMQGIPHWSTSNNRSLLFDREASELELLDTTDGQLMKEIYSENGSGWIKIAVVRDPVTRLLSSYLDLVDTWRARLILQWQPPANDTQSSD------HNRRWLWQWWPETEPT---------------------------DEVLQR-------------------------------GRGGG---------------------------------------------------IKEDGDD--------HHREH-----------------STAGTYAV-RDGSDAVRI--------------PTLVEVLEALKTDVWSAPVAFRPVSSLCGQRSSPFDSVIPFERLQKTSTEVVKSLPGDIWEAFGKSGWGPDGKHAFMDFDYGRGAWRGEATSGRGGEAVGGGTQTAEGNDMGDPFPRHARDLFEGENPCAWTEYYSDLEILDAVGVVYEMDYTHYRWYRLDVWKGKLNDCL 386
BLAST of mRNA_E-siliculosus-1a_M_contig84.16558.1 vs. uniprot
Match: A0A6H5LR87_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LR87_9PHAE) HSP 1 Score: 356 bits (913), Expect = 3.430e-111 Identity = 172/239 (71.97%), Postives = 196/239 (82.01%), Query Frame = 3
Query: 945 MLAHPWRVLNPEEADLFYVPMYPILSMKLGND---------RCGDKTHDELINTSVEYLALSSVYFRRFGGADHALVCAWWNCRGALGPKPRMLLRRTVVGINEKMLGWTRWGCGLDKMVTIPYTASSVLTTSEMIGGRAAEDRDIPFFFVGTARGRPERQNLDVVTGMAEGSVMMLGDHQSDWGMNSTQYAAHIARSSRFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSE 1634
ML HPWRVL+PEEADLFYVP+Y LS KL RCG THDEL++ SVEYL+ SS++F RFGGADH L+CAWW CR LGPK RMLLRRTVVGINE++ WTRWGCG KMVT+PYTASSVL TS+MIGGR AE RDIPFFFVGTARGRPER+NLDVV +A+GSV++L + S WGMNSTQYA H+ARS RFCF PRGDTESSRR+FDA+AAGCTPIVTEA+V +LPFS+
Sbjct: 1 MLFHPWRVLDPEEADLFYVPIYSALSSKLTEHSTIHLELRRRCGGLTHDELMDASVEYLSSSSLFFNRFGGADHILMCAWWGCRNGLGPKHRMLLRRTVVGINERVFKWTRWGCGPRKMVTVPYTASSVLATSDMIGGRTAEARDIPFFFVGTARGRPERENLDVVADIAKGSVVILDNLPSRWGMNSTQYAEHMARS-RFCFSPRGDTESSRRLFDAIAAGCTPIVTEATVPMLPFSQ 238
BLAST of mRNA_E-siliculosus-1a_M_contig84.16558.1 vs. uniprot
Match: A0A6H5L741_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L741_9PHAE) HSP 1 Score: 279 bits (713), Expect = 3.520e-81 Identity = 187/481 (38.88%), Postives = 223/481 (46.36%), Query Frame = 3
Query: 2127 QGLPHWAVSNDRSLLFDREPSGLELLDATDGHLMEEIYQENGSGWIKIGLVRDPVTRLLSAYLDLADRWREALSPPGXXXXXXXXXXXXXHDRRRLRQSPDEGEPTGEDDGRHRQQGGSRGHAPLTGSEWDLFDAIVDRRRRRRQWGQRGPGPRQEEENERIAYEGLQDSGRGGGSXXXXXXXXXXXXXSRNEGTDNQXGADASGGRGADVRLLQGERRTDAADQRAKVNSDDGREVSPEQHQQRHRDMEEEGERRFFWQGPGSWDGPEAAGEDGGDRSAVGGXXXXXXXXXGGVPTFVEVVETLKADVWGGPVAFRPAVSLCGQRNSPFDSVIPFERLQKTSTELVKSLPGDIWEAFGKSGWGPEGQHAFMEFDYGRNARRRQ------GGPVGEESQRPEG---------------NDKDEPLPPRARDLFDGEDLCAWAEYYTDLETLETVGKIYELDYIYYRWYRLDPWRERLQACL 3506
+G+PHW VSN+RSLLFDRE S + LLD TDG M+EI+ +NGSGWIKI +VRDPVTRLLS+YLDL D WR L + + + D V R+R Q G Q + E AYE +SG+ G N+ G DA VR VPT VEV+E L+ DVW PVAFRP SLCGQR+SPFDSVIPFERLQKTSTE+VKSLPGDIWEAFGKSGWGP+ +HAFM+FDYGR A R + G VG +Q EG ND + LP ARDLF+GE+ CAW EYY+DLE L+ VG +YE+DY +YRWYRLD W+E+L CL
Sbjct: 27 KGIPHWWVSNNRSLLFDREASEMTLLDTTDGQSMKEIFSDNGSGWIKIAVVRDPVTRLLSSYLDLVDTWRAGL---------------------------------------------------ILHQQSSINDPQVRRQR------QLGLFLEQSDGREGKAYEVFHNSGQNG----------------------NRDGGDA-------VR----------------------------------------------------------------------------------VPTLVEVLEALRTDVWSAPVAFRPVSSLCGQRSSPFDSVIPFERLQKTSTEVVKSLPGDIWEAFGKSGWGPDEKHAFMDFDYGRGAWRGELPNGGGGEAVGGGTQTAEGAATKGHHLCGGGGEGNDMGDSLPRHARDLFEGENPCAWTEYYSDLEILDAVGVVYEMDYTHYRWYRLDVWKEKLIDCL 339
BLAST of mRNA_E-siliculosus-1a_M_contig84.16558.1 vs. uniprot
Match: A0A6H5KVI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI3_9PHAE) HSP 1 Score: 128 bits (322), Expect = 8.540e-30 Identity = 96/216 (44.44%), Postives = 122/216 (56.48%), Query Frame = 3
Query: 342 MLPYSPGSRGGGNDPCSIIKRVS-----SSKRGGCGCCRTVNLVSRRTFVFVFAAGLLGAALVLLLSAGDRDRSSSLSSSLPSTSATTGFKATIPPGSQQQSGLQELQGGGDT-SPSSTPETSGG---------IAQEEXXXXGEGGDKPKITVRQAEGRGAGGGKVSVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERADMAQDMGEIWLHRA 944
M+ PG RG +I VS +S R RT+NL+SR T VFVFAA LG +VLL+SAGDR RS L P+ G KAT+P S+++S + G DT S + TP T+ G ++ D+P + VR AE + +V+VFVY+GVPELDH LV CYR V GV+PWQDER DMAQDMGEIW+HR+
Sbjct: 1 MISCGPGDRG-------VIDNVSGRGTIASARHSVRVNRTINLMSRGTLVFVFAAAFLGELVVLLVSAGDRCRSMMLPPERPTIEG--GLKATLPL-SKKKSDASQTNGDKDTGSATHTPGTTEGGGTLWRASRALEKAPAVVLSPADEPTMNVRTAEDQHPPS-RVAVFVYEGVPELDHMELVQCYRDVH-GVAPWQDERFDMAQDMGEIWMHRS 204
BLAST of mRNA_E-siliculosus-1a_M_contig84.16558.1 vs. uniprot
Match: A0A6H5L8I0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8I0_9PHAE) HSP 1 Score: 127 bits (319), Expect = 2.210e-29 Identity = 80/175 (45.71%), Postives = 104/175 (59.43%), Query Frame = 3
Query: 441 RTVNLVSRRTFVFVFAAGLLGAALVLLLSAGDRDRSSSLSSSLPSTSATTGFKATIPPGSQQQSGLQELQGGGDTSPSSTPETSGG--------IAQEEXXXXGEGGDKPKITVRQAEGRGAGGGKVSVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERADMAQDMGEIWLHR 941
RT+ L+S+RT VFVFA LGAA+VLL+ G+ RS L P+T + GFKAT+P ++ Q + G S + TP T GG +E KP + VR + R G KV++FVY+GVPELDH+ LV CYR GV+PWQDER DMA++MGEIW+HR
Sbjct: 23 RTIILMSKRTLVFVFAVAFLGAAVVLLVPVGNCGRSMMLPPERPTTES--GFKATLPLSHKKSDEFQTKEDGDTGSTTHTPGTEGGGTPWRASRALKEWKAVVSSPEAKPIVNVRPVKHRHPPG-KVAIFVYEGVPELDHTELVQCYRSGHRGVAPWQDERNDMAENMGEIWMHR 194
BLAST of mRNA_E-siliculosus-1a_M_contig84.16558.1 vs. uniprot
Match: A0A7S2RZT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZT5_9STRA) HSP 1 Score: 124 bits (312), Expect = 8.710e-26 Identity = 100/353 (28.33%), Postives = 160/353 (45.33%), Query Frame = 3
Query: 798 SVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERA-DMAQDMGEIWLHRAMLAHPWRVLNPEEADLFYVPMYPILSMKLGNDRCGDKTHDELINTSVEYLALSSVYFRRFGGADHALVCAWWNCRGALGPKPRMLLRRTVVGINEKMLGWTRWGCGLDKMVTIPYTASSVLTTSEM------------IGGRAAEDRDIPFFFVGT-----------------ARGRPERQN--LDVVT---GMAEGSVMMLGD-----------HQSDWGMNSTQYAAHIARSSRFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQ 1718
S F+YDG P D+ L+ CY+ GV W DER ++AQ+ G +WLH A+ HP RV +P A LF VP P LS K C + H + + V + S ++ ++ G DH + WW + A G + + T + + + W K V PY ++LT E+ +G + +RDI +F G+ A G + L V T +AE V+ L + ++ +S +YAA + R+ ++C RGDT +SRR++D++AAGC P++ V PF+ V ++ F V + P+ + K++Q
Sbjct: 122 SFFMYDG-PAFDYHSLLDCYKTAF-GVDAWVDERMWELAQNTGALWLHEALRRHPRRVKDPSRASLFVVPFDPYLSWKAVE--CEGEDHT-IRSEKVFHALTHSHWWNKYHGRDHVFIAVWWGAKKAYGKDLWKMAKDTAILVTFDEAFASDW----QKAVMAPYVPHALLTQQELATCDGRRTLLSHLGVHHSFERDIGLYFRGSVMHGVNCKYGNTWVRKAAYGAMSQMADALFVATESVSIAENGVIKLPEDAQVDTTRLITQENQGHFSSAKYAAELLRA-KYCLHFRGDTTTSRRVYDSIAAGCVPVIISDGTNV-PFTGTV-DWKLFTVAI-PEIAILQSPPEKIIQ 461
BLAST of mRNA_E-siliculosus-1a_M_contig84.16558.1 vs. uniprot
Match: A0A8J6CHB5_DIALT (Exostosin domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHB5_DIALT) HSP 1 Score: 108 bits (270), Expect = 8.390e-21 Identity = 121/399 (30.33%), Postives = 170/399 (42.61%), Query Frame = 3
Query: 828 LDHSWLVPCYRQVRDGVSPWQ-DERADMAQDMGEIWLHRAMLAHPWRVLNPEEADLFYVPMYPILSMKLGNDRCGDKTHDELINTSVEYLALSSVYFRRFGGADHALVCAWWNCRGALGPKPRMLLRRTVVGINEKMLGWTRWGCGLDKMVTIPYTASSVLTTSEMIG----GRAAEDRD-------IPFFFVGT-------------ARGRPERQNLDVVTGMAEGSVMMLGDHQSDW--------------GMNSTQYAAHIARSSRFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDP-------DAFTTRERVTKVVQDALSRSEAEVEQLREGGRRGMSALLYGVTMGKEIGDMRP-FLGTATKFVRASYALA 1883
+ S L+ C+ + R PW DE M EIW + ++ HP RV +A++F VP++P+LS +GN CG THDE + + L S +++R G H +V A + ALG + R LR +++ E WG GLD + P T + T G GR + +D I +F GT +G+ R L + SV+ L +S G ++ +YAA I +S++FC PRGDT +SRR +DAV AGC PIV + LPF E + + AVV P T R + A R A E LRE R G + D RP F G VRA + A
Sbjct: 66 FNFSNLLGCFHK-RHSCEPWACDEHPGMDHVAPEIWATQFLMHHPARVSQAMDAEIFLVPVWPLLSKLVGN-ACGQGTHDERMRKANAALR-GSAHWQRVPGR-HFVVAAGPRAQSALGDELRRSLRGSMIANEES------WG-GLD-WTSEPDTTAPAFTLRAADGEPGEGRMVDFQDVWGTQRHISLYFRGTYSNNAGHELNKKDPKGQDVRVKLIKLAAEIPRSVIKLLPVKSGISRRLLKATEGVPREGRSTAEYAAEI-QSAQFCLVPRGDTLTSRRFYDAVLAGCIPIVLSDGMP-LPFREELHAQYERAVVSVPLLRFMAAPVSTIRNAIETATLTAGERRHALFE-LREELRYGSGSPF----------DARPEFGGAVPHIVRAVHRRA 439 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig84.16558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig84.16558.1 >prot_E-siliculosus-1a_M_contig84.16558.1 ID=prot_E-siliculosus-1a_M_contig84.16558.1|Name=mRNA_E-siliculosus-1a_M_contig84.16558.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1060bp MLPYSPGSRGGGNDPCSIIKRVSSSKRGGCGCCRTVNLVSRRTFVFVFAAback to top mRNA from alignment at E-siliculosus-1a_M_contig84:568620..585301+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig84.16558.1 ID=mRNA_E-siliculosus-1a_M_contig84.16558.1|Name=mRNA_E-siliculosus-1a_M_contig84.16558.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=16682bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig84:568620..585301+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig84:568620..585301+ >mRNA_E-siliculosus-1a_M_contig84.16558.1 ID=mRNA_E-siliculosus-1a_M_contig84.16558.1|Name=mRNA_E-siliculosus-1a_M_contig84.16558.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=6360bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig84:568620..585301+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |