mRNA_E-siliculosus-1a_M_contig82.16444.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig82.16444.1
Unique NamemRNA_E-siliculosus-1a_M_contig82.16444.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig82.16444.1 vs. uniprot
Match: D7G286_ECTSI (Centrin-1, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G286_ECTSI)

HSP 1 Score: 1380 bits (3572), Expect = 0.000e+0
Identity = 825/1018 (81.04%), Postives = 839/1018 (82.42%), Query Frame = 1
Query:    1 MSKTATPIATAAAANAAAKKHRQNDDDARLIKLGRERDLSTAPAWIGFPGLSGVDLTQTQTFPVDKKARPRKRRWGEDWRELVIGASPYNKAAAKARAGRRARAERGASTAADARAEIEEKVSTSLLGVVPEEFCRDAPPAVEPPSSWSP-KAAAVAAGVRATNSAEDAAEGVGSGRRPIKIAVESSTTTGSRYASPSLAAPAATGGGEYVVAGAAHQSGLPTKASGPPRSDQQQQHASRPKRQRGATXXXXXXXXXERNYGERSRRRLAAFLEGQASATXXXXXXXXXXXXXGRAEQGEPCDGSISAVTAGRRDQTF-GLGGDALAPTPPSQSMTANFVGLLEGSLGLGVWTDPVASQLARPLNAFLAYLPPEGARLFDESGRRFTPHGGNHEAEANPPPDNEPSAAHATSPDGKKXXXXXXXXXXTSGIKAAPTGAGRAPTTQGAACISAPGTAASSLLTVTMERGTAEEAPRAVWLGRVAAVMEARGDRDEAVRLYGEAAAELTGKRVGASRNGSRDGSGGTASSCPSAAGMGRSTQLGGGDCGVGAGAGPDLFPYSARAHYLASIIERTYRRHFLRHVTVPSGTKRTAAQTLTAAAFRGYLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIMRGAQGRRKAREIRVLIRHTISAQSVVRMFLAKRTAQRMRLEEASAGLLQALQRGFVLRRVRATAISEIHTSLWWAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLKTAAGKVELAQEMRRANAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGVAITDAELKV--------------------------------------------------------------------------------------------------RRNLRAATGMALQDRARRSVVRRWVSSAAREAQVRFREARPPTLECCACHQAFALYGDYWRHFGGGR 2754
            MSKTATPIATAA               ARLIKLGRERDLSTAPAWIGFPGLSGVDLTQTQTFPVDKKARPRKRRWGEDWRELVIGASPYNKAAAKARAGRRARAERGASTAADARAEIEEKVSTSLLGVVPEEFCRDAPPAVEP SS S  KA  VAAG RATNSAEDAA+G GSGRRPIKIAVESS TTGSR  S SLAAPAATGGG+ VVAGAAHQ GLPTKASGPP SDQQQQHASRPKRQRG  XXXXXXXXXER  GERSRRRLAAFLE Q    XXXXXXXXXXXXX RAE+G+PCDGS SAVTAGR+DQTF GLGGDAL PTPPS+SMTANFVGLLEGSLGLGVWTDPVASQLARPLNA LAYLPPEGARLFDESGRRFTP GG+HEAEAN PPDNEPSAAHATSPDG+K    XXXXX TSGIKAAPTGAGR PTTQGAACISAPGTAASSLLTVTMERGTAEEAPRAVWLG+VAAVMEARGDRDEAVRLYGEAAAELTGKR GASR GSRDGSGGTAS CP AAG GRS QLGGGD GVGAGAGPDLFPYSARAHYLASIIERTYRRHFLR         RTAAQTL AAAFRG+LARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAI+RGA GRRKAREIR+LIRHTISAQSVVRMFLAKRT QRMRLEEASAGLLQAL RGFVLRRVRATAISEIHTSLW AALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYL T AGKVELAQEMRRA AAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALL ALGV IT+AELKV                                                                                                  RRNLRAATGMALQDRARRSV+RRWVS AAREAQVRFREA PPTLEC ACHQAFALYGDYWRHFGGGR
Sbjct:    1 MSKTATPIATAAXXXXXXXXXXXXXXXARLIKLGRERDLSTAPAWIGFPGLSGVDLTQTQTFPVDKKARPRKRRWGEDWRELVIGASPYNKAAAKARAGRRARAERGASTAADARAEIEEKVSTSLLGVVPEEFCRDAPPAVEPSSSSSSLKAVTVAAGARATNSAEDAADGAGSGRRPIKIAVESSATTGSRDVSSSLAAPAATGGGDCVVAGAAHQRGLPTKASGPPYSDQQQQHASRPKRQRGXXXXXXXXXXXERRNGERSRRRLAAFLEDQXXXXXXXXXXXXXXXXXXRAEEGQPCDGSNSAVTAGRKDQTFFGLGGDALEPTPPSESMTANFVGLLEGSLGLGVWTDPVASQLARPLNAVLAYLPPEGARLFDESGRRFTPPGGSHEAEANLPPDNEPSAAHATSPDGRKKKTAXXXXXTTSGIKAAPTGAGRGPTTQGAACISAPGTAASSLLTVTMERGTAEEAPRAVWLGQVAAVMEARGDRDEAVRLYGEAAAELTGKREGASRIGSRDGSGGTASPCPPAAGKGRSAQLGGGDRGVGAGAGPDLFPYSARAHYLASIIERTYRRHFLR---------RTAAQTLAAAAFRGHLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIIRGAHGRRKAREIRILIRHTISAQSVVRMFLAKRTTQRMRLEEASAGLLQALHRGFVLRRVRATAISEIHTSLWRAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLTTDAGKVELAQEMRRAKAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGALGVGITNAELKVTSAAVDADGSGEISFSEFYAWFGGGGFHGGGDYGVGEALGFRGMTSDTSENWSLRSSPSLSTARSGMEESTAALTSGYRSAEGNGGPRHTARATFVKARRNLRAATGMALQDRARRSVIRRWVSLAAREAQVRFREAWPPTLECWACHQAFALYGDYWRHFGGGR 1009          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16444.1 vs. uniprot
Match: A0A1V9YLD2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLD2_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.130e-9
Identity = 98/355 (27.61%), Postives = 142/355 (40.00%), Query Frame = 1
Query: 1855 ATFVARAWRRRMYRLGLATVKFQAIMRGAQGRRKAREIRVLIRHT-ISAQSVVRMFLAKRTAQRMRLEEASAGLLQALQRGFVLRRVRATAISEIHTSLWWA-ALGLNR-------------VARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLKTAAGKV--ELAQEMRRANAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGV----------------------------AITDAE-----------LKVRRNLRAA----TGMALQDRARRSVVRRWVSSAAREAQVRFREARPPTLECCACHQAFALYGDYWRH 2739
            AT +   +RRR  R   AT + Q   RG   RR     R L + + +  Q    +  A + A R+R++ A+   L  L+   V+R  RAT        LW   AL   R             V RGFL RR    +R+     E+TR   E A +     +     ++YL  A  +   +LA++++  +A   R+++     +P + RRA   DVF S+D+DGSGTID  ELK L   LG+                            A  +A            LK +  LRA     T    +  ARR +     +    E +  FR   PP   C  CH  F  Y  +W+H
Sbjct:  382 ATTIQMLYRRRHRRRVRATWRLQTAWRGFHARRAYARRRWLRQESAVYIQRWWHVHTADKEAMRLRIQTAARRKLARLR---VVRLHRATKCLHKWVRLWLVRALARIRLGXXXXXXXXXXXVVRGFLGRRRVRWLRKVIAADEVTRLTQEEAYIERFSTIRLKDFNLYLAEAGVRRVRDLAKKLKADDALRARSRVHW---TPTQLRRARLQDVFASYDMDGSGTIDADELKPLFDELGIPMDRXXXXXXXXXXXXXXXXXXXXXXFCAYLEAPERAGGPAGLWLLKAQLGLRAVANWFTAATYKAHARRRLAHEERTRLRPELRQAFRADYPPRFACPLCHAPFCFYMPFWQH 730          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16444.1 vs. uniprot
Match: A0A067C2L8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C2L8_SAPPC)

HSP 1 Score: 72.0 bits (175), Expect = 5.370e-9
Identity = 105/403 (26.05%), Postives = 159/403 (39.45%), Query Frame = 1
Query: 1663 FPYSARAHYLASIIERTYRRHFLRHVTVPSGTKRTAAQTLTAAAFRGYLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIMRGAQGRRKAREIRVLIRHTISAQSVVRMFLAKRTAQRMRLEEASAGLLQALQRGFVLRRVRATAISEIHTSLWWAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGG--AVRLATTRADMYLKTAAGKVELAQEMRRANAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALL---------AALGVAIT---------------------------------DAELKVRRNLRAATGMALQDRARRSVVRRWVSSAAREAQVRFREARPPTLECCACHQAFALYGDYWRH 2739
            F Y+   H  AS+++  YRR  LR         R A +  T   +RG+  R   ++   HR ++A ++ R W  R       T   +A+    Q   + +   +L+R    A  V+R  +              A L+ AL R  + R +RA             A  + R+ RGFL RR    +R   V  E+ R   EA  +    A+RL      ++    +   +LAQ ++  + A  R +     A P   RRA+  D+F S+D+DGSGTID  EL+ L          A+L  AI                                   A+L+++R     T    ++ ARR +V       A+  +  FR    P   C  C  AFALY  +WRH
Sbjct:  371 FNYTLEVHAKASLLQMRYRRRHLRRA-------RAALRLQTV--WRGFHDRRRFKRRLWHRQASALYIQRWWHVR-------TADKEAMRLRLQTAARRKLAYLLVRRMRKAHKVLRASI-------------HAWLVCALARLRLRRAIRA-------------ATNIQRLVRGFLSRRAVLRLRDRIVRDEVARSSREADYIQRFTAIRLEDFLLFLHQAGQSHVHQLAQRLK--DEATARKRARAHWA-PAAMRRAALEDLFASYDVDGSGTIDVDELQHLFDELCIPMDAASLAQAIRLMDTSRNGSVDMSEFCAYLEAPPPQSNAGLWKLHAQLQLQRVANWFTSATFKNEARRRLVYDETQRQAQLLRTEFRMTEHPRFACPYCGAAFALYRPFWRH 728          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16444.1 vs. uniprot
Match: A0A6G0WAC7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAC7_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.560e-8
Identity = 104/419 (24.82%), Postives = 150/419 (35.80%), Query Frame = 1
Query: 1636 VGAGAGPDLFPYSARAHYLASIIERTYRRHFLRHVTVPSGTKRTAAQTLTAAAFRGYLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIMRGAQGRRKAREIRVLIRHTISAQSVVRMFLAKRTAQRMRLEEASAGLLQALQRGFVLRRVRATAISEIHTSLWWAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLK-TAAGKVELAQEMRRANAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGVAIT-----------DAE-----------------------------------LKVRRNLRAATGMALQDRARRSVVRRWVSSAAREAQ----VRFREARPPTLECCACHQAFALYGDYWRH 2739
            +GA   P  F Y   AH  AS I+R Y R +           R+ A    A  +RG+  R    K +     +A  + R W R                      R+   +R+        Q+ +R  LA+     +R        LQ L + + ++     A+   H    +  L   R  RG + R     +++   D E  R  AE A V   +          LK T  G + L++   R  A  V      R  S  +RRRA  HDVFD++D+D SGTID  EL+ L   LG+AI            DA+                                   LK++ N++        D   +   R  V   +++ Q      FR  RPP   C  C   FALY  +WRH
Sbjct:  338 LGATPAPWGFHYDLSAHKKASTIQRLYHRRY---------RLRSTAAVQVARVWRGFRTRRRLVKARRRADQSAARLQRWWHR------------------CNRHRETMRLRL--------QTAMRAKLARLHVHALRQRRLLMRNLQLLVKAWRVQHNSLQALRRKHGYAHFCQLTKERWLRGVIARYRVRKLKRALQDEEAARYAAECAFVDLHLEPKLRDFQRLLKSTRGGAMRLSRLALRLKAEAVARDEARRHWSVADRRRAQIHDVFDTYDVDKSGTIDSNELRHLFDELGIAIDAGGLAEALKAMDADGSGSIEFDEFYAWLHAPPPPSSTSRHLREGSTLVFLKMKLNVKQFVNRFTDDSFAQHAARLLVFEESQKTQDALRKSFRVTRPPRFACRFCGTPFALYKAFWRH 721          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16444.1 vs. uniprot
Match: W4GHF5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHF5_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.480e-8
Identity = 110/412 (26.70%), Postives = 164/412 (39.81%), Query Frame = 1
Query: 1663 FPYSARAHYLASIIERTYRRHFLRHVTVPSGTKRTAAQTLTAAAFRGYLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIMRGAQGRRKAREIRVLIRHTISAQSVVRMFLAKRT-AQRMRLEEASAGLLQALQRGFVLRRVRATAISEIHTSLWWAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLKTAAGKVELAQEMRRA--NAAVVRTKILMRGA------SPEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGVAITDAELK--------------------------------------VRRNLRAA------TGMALQDRARRSVVRRWVSSAAREAQVRFREARPPTLECCACHQAFALYGDYWRH 2739
            +PYSA AH  A +I R Y+    R   +    ++    T     F  +  RV  +  +  R +  + VAR  +R M R  LAT    A           R+I          QS  R  LAKRT A   R+  A+  + +A ++  +  R R    S I T           + R +L RR   +        E  R E E   +  A ++A   + +Y  TA GK E+ +E +R   N  + +T+  ++ A      S ++    +    FD+FD DGSG+ID  EL+ LL+ LG+ I+D EL+                                      +R  LR        TG   + +A + +  R    A   A+  FR ARPP   C  CH AF L  D++ H
Sbjct:  264 YPYSAHAHNCARMIRRCYQTSCDRR-NMQQKLRQLVRSTRFVQDFLRF--RVHCKVQRRQRRAVQSLVARRLQRPM-RSYLATKHTSA-----------RQI----------QSRWRQVLAKRTLATERRMHRAATSITRACKQFVLSLRRRHVLASRIQT-----------IGRAWLWRRRGRLA-------EAERREVEWRVMKEASKVAMAASVLYFMTADGKAEVKRERKRMRENVKLAKTQQGVQAATSSSPPSKDDLETLAIRHSFDTFDTDGSGSIDVHELRLLLSELGIPISDRELQAGFXXXXXXXXXXXXFDEFAAWWKHGLTAGKAKTQMALLRLKLRGRSLVHKITGAEARAQAAKRIASRRRVDAMIAARDEFRNARPPVSCCHMCHMAFGLDQDWFVH 632          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16444.1 vs. uniprot
Match: A0A024UUQ2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUQ2_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 6.140e-6
Identity = 85/317 (26.81%), Postives = 118/317 (37.22%), Query Frame = 1
Query: 1990 ISAQSVVRMFLAKRTAQRMRLEEASAGLLQALQRGFVL------RRVRATAISEIHTSLWWAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLKTAAGKVELAQEMRRANAAVVRTKILMRGAS----PEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGVAITDAELKVRRNLRAATGMALQD------------------------RARR----------------SVVRRWVSS-----AAR------------EAQVRFREARPPTLECCACHQAFALYGDYWRH 2739
            +  Q+ +R  LA +     R ++     L+ L R +VL      +R R   + + +      AL  +R  RG+L R     ++      E  R   E A V   V +     +  L +A+    L    +R    +  T I    A     P ERRRA   DVFD++D+DGSG++D  ELK+L   LG+AI       RR L+ A      D                        R RR                 ++ RW  +     AAR              QV FR   PP   C  C  AFALY  YW H
Sbjct:  438 VRIQTAMRKKLACKKVHVRRQQKKLVRNLRQLVRAWVLEFHSLQKRRRRLGLEQFY------ALTKDRWLRGYLARYRVRQLKCRLERDEAARSTRERAFVSSNVAVKMATFECQLNSASTTSLLGTRRKRLTLQLKATAIERTAARKHLPPVERRRAQVRDVFDAYDVDGSGSMDSRELKSLFDELGIAID------RRGLQDALAAIDADHNGVVDFDEFYNWLDTAPTQRHNGRRRRLDRPELVFLKMKLSMKHLLNRWTDASFSQHAARLLYHDESLRQTSAMQVAFRRTEPPRFACVYCGMAFALYKPYWAH 742          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16444.1 vs. uniprot
Match: A0A835ZFC5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC5_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.640e-5
Identity = 74/284 (26.06%), Postives = 112/284 (39.44%), Query Frame = 1
Query: 1660 LFPYSARAHYLASIIERTYRRHFLRHVTVPSGTKRTAAQTLTAAAFRGYLARVGARKDKTHRSSAATFVARAWR---------------------------RRMYRLGLATVKFQAIMRGAQGRRKAREIRVLIRHTISAQSVVRMFLAKRTAQRMRLEEASAGLLQALQRGFVLRRVRATAISEIHTSLWWAALGLNRVARGFLHRRFAGMVR-QFAVDGEITRCEAEAAAVGGAVRLATTRADMYLKTAAGKVELAQEMRRANAAVVRTKILMRGASPEERR 2427
            LFPY+ RAH+ A+ ++R  RR   R         + AA T  AA  RG+L R   R+ +  R + AT + + W                            R   +  +A    Q++ RGA+ R + R +R  I      Q   R  L +                 AL RG+  RR          + LW AA  +    RG L RR+A ++R Q  +  +  R       +  A R +++RA      A    + AQ +R A AA +  K  +R  +PE R+
Sbjct:  118 LFPYAPRAHFAAAQLQRACRRRLQR---------KAAAATAVAAGLRGHLVRRKRRRARAVREAGATRIQKLWASLDPPLTPLCVRHRXXXXXXXXXXXXXRYQRKRHVAATAIQSLARGARDRARVRWLRAAIAAAARVQRTWRGCLGRXXXXXXXXXXXXXXXXXALARGYGTRRAXXXXXXXXQSQLWRAAARVAVAWRGRLCRRYAALLRRQEHLRMKAPRLPTPMLTLKLATRASSSRATQLAAEARRARDEAQHVRGAIAAAL-AKQRLRFDTPEGRQ 391          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16444.1 vs. uniprot
Match: A0A3L6UUP1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UUP1_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 7.210e-5
Identity = 46/159 (28.93%), Postives = 58/159 (36.48%), Query Frame = 1
Query: 2413 PEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGVAIT--------------------------------------------------DAELKVRRNLRAATGMALQDRARRSVVRRWVSSAAREAQVRFREARPPTLECCACHQAFALYGDYWRH 2739
            PE  RRA   DVFD++D+DGSGTID TELK+L   LG+AI                                                     +L ++  L   T  +    A R +V       A    + FR   PP   C  C  AFALY  +W H
Sbjct:  292 PEAFRRAQVRDVFDAYDVDGSGTIDATELKSLFDELGIAIDRRGLHXXXXXXXXXXXXXXXFDEFIHWLHSPPAQQGHRVRRLNRPELVYLKMKLNMKHLLNRFTDASYSQHATRLLVHDESVRQASAVVLAFRALEPPAYACLYCDMAFALYKSHWTH 450          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16444.1 vs. uniprot
Match: W4GL07_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GL07_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 8.380e-5
Identity = 48/159 (30.19%), Postives = 60/159 (37.74%), Query Frame = 1
Query: 2413 PEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGVAITDAE----------------------------------------------LKVRRNLRAA----TGMALQDRARRSVVRRWVSSAAREAQVRFREARPPTLECCACHQAFALYGDYWRH 2739
            PE  RRA   DVFD++D+DGSGTID TELK+L   LG+AI   E                                              LK++ N++      T       A R +V       A    + FR   PP   C  C  AFALY  +W H
Sbjct:  596 PEAFRRAQVRDVFDAYDVDGSGTIDATELKSLFDELGIAIDRREXXXXXXXXXXXXXXXXXFDEFIHWLHSPPAQQGHRVRRLNRPELVYLKMKLNMKHLLNRFTDAFYSQHATRLLVHDESVRQASAVVLAFRALEPPAYACLYCGMAFALYKSHWTH 754          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G286_ECTSI0.000e+081.04Centrin-1, putative n=1 Tax=Ectocarpus siliculosus... [more]
A0A1V9YLD2_9STRA4.130e-927.61Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A067C2L8_SAPPC5.370e-926.05Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A6G0WAC7_9STRA1.560e-824.82Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4GHF5_9STRA2.480e-826.70Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A024UUQ2_9STRA6.140e-626.81Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A835ZFC5_9STRA5.640e-526.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3L6UUP1_9STRA7.210e-528.93Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4GL07_9STRA8.380e-530.19Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig82contigE-siliculosus-1a_M_contig82:693876..703306 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size2766
Model size2766
Exons14
Hectar predicted targeting categoryother localisation
BRITEko00000,ko03036
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.DTZ
EggNOG OGsCOG5126@1,KOG0028@2759
EggNOG free text desc.Ca2 -binding protein (EF-Hand superfamily
KEGG koko:K16465
Seed eggNOG ortholog157072.XP_008861096.1
Seed ortholog evalue2e-07
Seed ortholog score65.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig82.16444.1prot_E-siliculosus-1a_M_contig82.16444.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig82 693876..703306 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936261.7642798-CDS-E-siliculosus-1a_M_contig82:693875..6941481622936261.7642798-CDS-E-siliculosus-1a_M_contig82:693875..694148Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 693876..694148 +
1696250997.2523847-CDS-E-siliculosus-1a_M_contig82:693875..6941481696250997.2523847-CDS-E-siliculosus-1a_M_contig82:693875..694148Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 693876..694148 +
1622936261.7826073-CDS-E-siliculosus-1a_M_contig82:695677..6957671622936261.7826073-CDS-E-siliculosus-1a_M_contig82:695677..695767Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 695678..695767 +
1696250997.264133-CDS-E-siliculosus-1a_M_contig82:695677..6957671696250997.264133-CDS-E-siliculosus-1a_M_contig82:695677..695767Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 695678..695767 +
1622936261.8031545-CDS-E-siliculosus-1a_M_contig82:696334..6965461622936261.8031545-CDS-E-siliculosus-1a_M_contig82:696334..696546Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 696335..696546 +
1696250997.274207-CDS-E-siliculosus-1a_M_contig82:696334..6965461696250997.274207-CDS-E-siliculosus-1a_M_contig82:696334..696546Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 696335..696546 +
1622936261.8186672-CDS-E-siliculosus-1a_M_contig82:697006..6972841622936261.8186672-CDS-E-siliculosus-1a_M_contig82:697006..697284Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 697007..697284 +
1696250997.284798-CDS-E-siliculosus-1a_M_contig82:697006..6972841696250997.284798-CDS-E-siliculosus-1a_M_contig82:697006..697284Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 697007..697284 +
1622936261.8396795-CDS-E-siliculosus-1a_M_contig82:697368..6974321622936261.8396795-CDS-E-siliculosus-1a_M_contig82:697368..697432Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 697369..697432 +
1696250997.2957098-CDS-E-siliculosus-1a_M_contig82:697368..6974321696250997.2957098-CDS-E-siliculosus-1a_M_contig82:697368..697432Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 697369..697432 +
1622936261.8582804-CDS-E-siliculosus-1a_M_contig82:697893..6981011622936261.8582804-CDS-E-siliculosus-1a_M_contig82:697893..698101Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 697894..698101 +
1696250997.3072824-CDS-E-siliculosus-1a_M_contig82:697893..6981011696250997.3072824-CDS-E-siliculosus-1a_M_contig82:697893..698101Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 697894..698101 +
1622936261.8774223-CDS-E-siliculosus-1a_M_contig82:698826..6994611622936261.8774223-CDS-E-siliculosus-1a_M_contig82:698826..699461Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 698827..699461 +
1696250997.3188636-CDS-E-siliculosus-1a_M_contig82:698826..6994611696250997.3188636-CDS-E-siliculosus-1a_M_contig82:698826..699461Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 698827..699461 +
1622936261.8935244-CDS-E-siliculosus-1a_M_contig82:699622..6998691622936261.8935244-CDS-E-siliculosus-1a_M_contig82:699622..699869Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 699623..699869 +
1696250997.3295763-CDS-E-siliculosus-1a_M_contig82:699622..6998691696250997.3295763-CDS-E-siliculosus-1a_M_contig82:699622..699869Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 699623..699869 +
1622936261.9095664-CDS-E-siliculosus-1a_M_contig82:700099..7002561622936261.9095664-CDS-E-siliculosus-1a_M_contig82:700099..700256Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 700100..700256 +
1696250997.3449004-CDS-E-siliculosus-1a_M_contig82:700099..7002561696250997.3449004-CDS-E-siliculosus-1a_M_contig82:700099..700256Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 700100..700256 +
1622936262.0912437-CDS-E-siliculosus-1a_M_contig82:700985..7011431622936262.0912437-CDS-E-siliculosus-1a_M_contig82:700985..701143Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 700986..701143 +
1696250997.358147-CDS-E-siliculosus-1a_M_contig82:700985..7011431696250997.358147-CDS-E-siliculosus-1a_M_contig82:700985..701143Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 700986..701143 +
1622936262.103533-CDS-E-siliculosus-1a_M_contig82:701326..7014911622936262.103533-CDS-E-siliculosus-1a_M_contig82:701326..701491Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 701327..701491 +
1696250997.3688293-CDS-E-siliculosus-1a_M_contig82:701326..7014911696250997.3688293-CDS-E-siliculosus-1a_M_contig82:701326..701491Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 701327..701491 +
1622936262.1158028-CDS-E-siliculosus-1a_M_contig82:701826..7018891622936262.1158028-CDS-E-siliculosus-1a_M_contig82:701826..701889Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 701827..701889 +
1696250997.37773-CDS-E-siliculosus-1a_M_contig82:701826..7018891696250997.37773-CDS-E-siliculosus-1a_M_contig82:701826..701889Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 701827..701889 +
1622936262.129921-CDS-E-siliculosus-1a_M_contig82:702646..7027481622936262.129921-CDS-E-siliculosus-1a_M_contig82:702646..702748Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 702647..702748 +
1696250997.3885896-CDS-E-siliculosus-1a_M_contig82:702646..7027481696250997.3885896-CDS-E-siliculosus-1a_M_contig82:702646..702748Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 702647..702748 +
1622936262.144286-CDS-E-siliculosus-1a_M_contig82:703192..7033061622936262.144286-CDS-E-siliculosus-1a_M_contig82:703192..703306Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 703193..703306 +
1696250997.3981698-CDS-E-siliculosus-1a_M_contig82:703192..7033061696250997.3981698-CDS-E-siliculosus-1a_M_contig82:703192..703306Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 703193..703306 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig82.16444.1

>prot_E-siliculosus-1a_M_contig82.16444.1 ID=prot_E-siliculosus-1a_M_contig82.16444.1|Name=mRNA_E-siliculosus-1a_M_contig82.16444.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=922bp
MSKTATPIATAAAANAAAKKHRQNDDDARLIKLGRERDLSTAPAWIGFPG
LSGVDLTQTQTFPVDKKARPRKRRWGEDWRELVIGASPYNKAAAKARAGR
RARAERGASTAADARAEIEEKVSTSLLGVVPEEFCRDAPPAVEPPSSWSP
KAAAVAAGVRATNSAEDAAEGVGSGRRPIKIAVESSTTTGSRYASPSLAA
PAATGGGEYVVAGAAHQSGLPTKASGPPRSDQQQQHASRPKRQRGATATA
TASGDGERNYGERSRRRLAAFLEGQASATTAAAADGGAVGGGGRAEQGEP
CDGSISAVTAGRRDQTFGLGGDALAPTPPSQSMTANFVGLLEGSLGLGVW
TDPVASQLARPLNAFLAYLPPEGARLFDESGRRFTPHGGNHEAEANPPPD
NEPSAAHATSPDGKKKKTSTATATTTSGIKAAPTGAGRAPTTQGAACISA
PGTAASSLLTVTMERGTAEEAPRAVWLGRVAAVMEARGDRDEAVRLYGEA
AAELTGKRVGASRNGSRDGSGGTASSCPSAAGMGRSTQLGGGDCGVGAGA
GPDLFPYSARAHYLASIIERTYRRHFLRHVTVPSGTKRTAAQTLTAAAFR
GYLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIMRGAQGR
RKAREIRVLIRHTISAQSVVRMFLAKRTAQRMRLEEASAGLLQALQRGFV
LRRVRATAISEIHTSLWWAALGLNRVARGFLHRRFAGMVRQFAVDGEITR
CEAEAAAVGGAVRLATTRADMYLKTAAGKVELAQEMRRANAAVVRTKILM
RGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGVAITDAELK
VRRNLRAATGMALQDRARRSVVRRWVSSAAREAQVRFREARPPTLECCAC
HQAFALYGDYWRHFGGGRYTG*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig82:693876..703306+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig82.16444.1 ID=mRNA_E-siliculosus-1a_M_contig82.16444.1|Name=mRNA_E-siliculosus-1a_M_contig82.16444.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=9431bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:693876..703306+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGAGTAAGACTGCCACTCCCATCGCTACGGCCGCTGCCGCCAACGCCGC CGCCAAGAAACACCGCCAAAATGACGACGACGCAAGGCTCATCAAGCTCG GCCGCGAGCGAGACTTGTCGACAGCGCCGGCGTGGATCGGTTTCCCGGGT CTGTCCGGGGTCGACCTCACGCAGACTCAGACCTTCCCCGTTGACAAGAA AGCCCGGCCTCGGAAGCGGCGGTGGGGTGAAGACTGGCGGGAGCTCGTCA TCGGGGCGTCCCCCTACAATAAGGTAAGTGAGCACGAAACCTTACCCTTT GGAAGCCGAGCAGTCATACATTTGTAGTCAACGGAATCTTGTGACAGCGG TTCTCCGCTCACCGCGCACACTTGCACCTGCAGCCCATCGTTGGGGCGAA TTCCACCGCTTTGAACGCACGCAGTTTGGATGTCGCTAAAAGTCCAGTCT CAATACACAAACTTTCAAAAGAACGGTGCCGTCAAACGGACGTCGGCTTC TCTACATTGCTCGATGGACCCGCTTCCCTTATTTCCAGCATCTTGTGGCC GTGAAAGGATGTGCACCTTCTCTCCGTGAACGTATGTGTATTTCCAAGGA TGTATGTACACACGCAGCCTCCGGAACGCCATAGCTTCCCGGATTCGAAG TGTCTTTTGCGCACGTATTGACAAGACTAGACGGCAGCCTAGAGTCTTGG TGTATTGCATATTTTCGGTCGCCGCAAACGTTGTTTCGCAGAATGTGGCG CCGGTCCCGGAGCAACCAGTCATCACTGTGCAGGAGGTGGTTGCTCGAAA GATGCTCAAGCTTCGCACAAAGCTAGGCATAACCACCGAAGATCTCCTGC CAGCCTCCGCAGCCTTTGAATCCGAGAAAGAATTTCAGCCACACAGGCAA CGACGCTCAGGCCAACGGCATGGCGCCCCAAGCGGGCAAGACGAGTCGAA TGTGGACGACGGTAGTGGTCGTGCTAGGCCGATTACTGCAAACAGTGGCC GGTGTGAAACAGCGACGCCGGCCACACCAGATATTGGGCGCTGGAAAAAG GAGGCGGATGACATGCTGAGCCTGCTCGGAACGAATGCCGACAAGTGTGT CCATGACTACCCGATGACGGAGCTCAGGCGAAAGGTACTGCCTCCCTCAG TATTGGTAGATATCACCTCTCTCAGAATTGAAGGGCCCTGTGAATGATGC ACCACAGGTGTGTTTGTGTCGGGAGAGGCCACCCAGCTTGGAGGAGAGAA CGCCCCAGCATTTGTGCGGCGCTCAATTTCCACGTGTAGTAGATGTTTTA CCCTTGTACTTTTCGGCGTACGTGTGAGAGGGCAGCAAGAATATGCGGTA AACGAGTTGTGTGAGAAAGGAGAGCCCAGCCGAACTGAGGTTCTGGGAAT TGTGTGATTTTGGCGCATGGCATGCCCTGTCGTACGTGGCCCTGGGTGAA GTAGCGGCATGTCGGCAAGAAAAACTCATCGTTACACCCTACTCTCCAAC GGTGTACACGTTCCCGTGATATTGTCTCCTAGATGGCTTCGTCGCCGCCA GCTAACACTACCGAGCAACATCAGCACAGGCAAGGCCACCAACGCCACCC ATCAACACAGGAGCCACTTCTGCTGCCAAATTCTTCGTCAGCGTCGATAT CACTCAGACCCACCGTCGGCAACCGCGGCGGTAGCCGTCGAGCAGCCACC GAGCATAGCGCAGACCAGAGCGGACAAGGGAGAGATACTTGTTACCGTCT GCCGCAGTACCGGCATGACACGCCTTGGCCTCGCCCCCGTCCTTCGGCGG AGGCGGCGGCGAAGGCGCGGGCGGGCAGACGGGCCAGGGCCGAGAGGGGG GCGTCCACAGCGGCGGACGCTCGAGCGGAGATTGAAGAGAAGGTGTGCAC GAAAAATCGGCCCGCTGGTTCTCTTGTTGTTCGTTATTTTGATGTGTTGT GCTGTGTAGTGGAACCGTATTGCGTGACGTGGTTTAAGATGTTGGGATAA TTTAGTTCGGTGACGGGTGTATGCGGGGACAAGTTTTAGGAGTCATTCGG TAGACACGCTGTGTCCGAAATGTAGGCTTTACTGGTCTGTCTGTCCAATA GCGGGGTATGTTCCCAAGAACCTTGTGTGACGCTTAGAAATACTGGGTTA AAAAGTCGACTGCTCCTGGTCGGCTGCGGATACCGCTGGTATCGACGAGG CTACGTCCCACGATCCTCTTGTGTTGTTCGTCCCTCGCTGGTTCGGGACC TGACAGAACGATCCCCTTCGACACACTGACCAGCGTAAGATAGGCTGGCC ACCGAAAGCAAGGATAGGTTTTATCTCTTGCTCGGGATGGAAAATGCGAC AGCCTTATACGTCCAGCCTGACGCATGCCGTGCCCCACCGAACTCCATCA ACACAACGTCCCTGGTCGGACTGTCTGTCATGCGTTTGACGCGCTTCTCA CCGTGACAGGTGTCCACGAGTCTGCTTGGCGTCGTTCCAGAGGAGTTTTG TCGTGACGCACCGCCAGCGGTAGAGCCGCCGTCGTCGTGGTCGCCGAAAG CAGCGGCTGTGGCAGCAGGAGTTAGGGCAACCAATAGCGCAGAGGATGCC GCCGAGGGCGTGGGAAGTGGGAGACGGCCGATCAAGATCGCTGTGGAAAG TTCTACTACGACCGGCTCAAGGTGGGGAATGATTCTGATTCGTGTATTGA TTTGCTGGTTTTGGTCGCGGTAGCATGCAGCGTCCTTGTAACGGTTGAAC GTTCTAGGCTGGAGGGTGTTCGCGTTGATCATAGCTGAATGCGTCGAAGG CAACCACTACGTACCTGCTTTCCACGGCGGCTCTTGATGGGCGTCAGGAG AAGATTGGTTTTGAAAGTTGAGAAACACCTATTTGTCGTACTCTTTCATG GCGACACAACAGCCTCTGCCACCTTGGCCAGTGCACTCTTGGAGTCTGTT CTCACGCGGTGTTTAATATTACCTTTGCTATGAGTTGAAGTAGCCCTTGT TAACTGGAATGGTATTCCAGCCGGTCGAAGCCTGTCTTCTGCTCTGCTCC AGAAGTACTGAAGTACAGCACTGACAACCTGTGCGAACGTGTGCGCTCTA CGCGTATCATTTGCATCTCGCGACGTCGCAGATATGCTTCCCCTTCGCTA GCTGCCCCTGCTGCTACTGGAGGTGGTGAATACGTTGTGGCTGGCGCCGC CCACCAGAGCGGCCTCCCGACGAAAGCCTCCGGGCCGCCCCGCTCAGACC AACAACAACAGCACGCGTCAAGACCAAAGCGTCAGCGCGGAGCGACCGCC ACCGCCACGGCCAGCGGTGATGGCGAAAGGAACTACGGAGAGAGATCTCG ACGTCGTCTCGCTGCTTTTCTAGAAGGCCAGGCTTCGGCCACGACGGCAG CGGCAGCAGGTACGGCACGCCAAGGTTACGGGTCGCCAAAGTCCCCGCCC CGAGCCGTAACGATGGTTGCGGGTGGACGTGGCGGCCGTTCAGACGGGGG CGCAGTCGGAGGTGGTGGCCGTGCCGAACAAGGAGAGCCATGCGACGGGA GCATCAGGTGTGGTGTAGCCTGCAGGCTTGTTCGGAAGCGCCTGTGTGCT GAGGACACGATTGTGTGCATTGTGACATACTACTGTCTTTCCGCCCTGAT TATCCCTTGGTTGTGGGCAATGGTTTACTCATCTTTTCCCCCTGCCCAGA TTGACTCATTCTATTGTACCGTTAGAAATCTTGTTGCGAGGGTGTGCAAC GAGCACGAGCATGGGAACCACAAAAGAGCCAGATGCGTTCGCGTTTCTTT GGCCACCTTCGTTGTGATGACATAGCTTGTTTTCCCGCAAAGCGTGTTCC CGTGGTATATCGATCCTCTCCTTCGGCTTGTTTCGCCGCTGCGCTTGTTT CTTCGAAGAAACACTTCGTTGTTCAACATCGTTTCGTCCAAAACACCGCC CTCGCCCTTTCATCTTTTCAGCACCATGTTTTGTTTGTTTTTTCTGTTTG GCCTCAAATCACCGCTAGCGCCGTCACCGCCGGGCGCAGGGACCAAACCT TCGGGCTGGGGGGGGACGCGCTGGCGCCGACCCCGCCCTCCCAGAGCATG ACCGCCAACTTTGTCGGCCTCCTCGAGGGCTCGCTCGGCCTCGGCGTGTG GACCGACCCCGTCGCATCCCAGTTGGCGAGGCCCCTGAACGCCTTTCTCG CCTACCTTCCTCCAGAGGGCGCACGGGTAAGGGAGGATTTATTGTCGTGG TACCTTCAAGTTTAGGCCTGTTTTTTTGTGCGGTGACGACAAACTCGATG CGAGTCAGGAGAACCGAATCGAGCTCTCGCTTGACGTGTTCTGAAGGGCA AGTGCGGGTGAGAGGGTGGCCATCTTGGCATCCGGGTTGAGACTAGGGTG GCTGGTTGGGGTAGGGGCTAGATAAGACTTGAATGGTCAACGGGTACCGA ATGCGGTGCCCTCCTCCCCGGTGCTGCTGAGAGGCCATTACAAGGCTCGG CTCACTACCCTTCCAAAACGTCGCGGAAAAGTGATCAGAGCGAGCATTCG GCGCAGGCAGCGACGTTGTGGAGGTATATTGTACCTGTACCGACGCAGCT CCCACCGAAATCCAAAAGGGAGGCGGCCTGAACAGGTACACGTTGGGCGC TGCCCAAAAACCACCTGCTCGAGGGGTGTTGACAAGAACACGTCGCTCCG CTGGGCAAAGATTCTCTTATTTTGTCGGGAGAAGTTCTACGGGGTGTGCT ATCTCTTCTTCGCGCCCTTGCCCCAGCAAATCCTTTGACATAAAACCACA CGTGTTACTGTTGATCATTGTGTTGGCAGCCTCCTTCTCTTCGCTTTCGG AAACAACTTCACGCGAGAAACATACCTTCACTAAGACGATAAATGGGGCT TCCTGTCTCCCTCTCGCCCAACCCTGACCCCTCCTATTACCTCAACGAAA GCTGTTCGACGAGTCTGGTCGTCGCTTCACGCCCCACGGCGGCAACCACG AAGCCGAAGCGAACCCCCCCCCGGACAATGAGCCCTCCGCGGCGCACGCA ACATCCCCGGACGGGAAGAAGAAAAAGACATCAACGGCGACGGCGACAAC GACCAGCGGCATCAAAGCGGCGCCAACCGGAGCCGGAAGAGCCCCCACAA CGCAGGGAGCCGCGTGTATTTCGGCACCCGGTACTGCTGCGTCGTCGCTC CTCACCGTCACGATGGAGCGCGGGACCGCGGAGGAGGCGCCCCGCGCGGT CTGGCTCGGGCGGGTCGCGGCGGTGATGGAGGCCAGGGGGGACCGGGACG AGGCGGTCCGGCTCTACGGGGAGGCGGCGGCAGAGCTCACGGGGAAAAGA GTAGGGGCCAGTCGCAATGGCTCTCGTGACGGTAGTGGTGGCACTGCGAG CTCATGCCCCTCTGCTGCGGGAATGGGTCGCTCCACCCAACTCGGGGGCG GCGATTGCGGCGTTGGTGCTGGAGCCGGCCCGGACTTGTTCCCGTACTCT GCTAGAGCCCACTACCTCGCTTCCATCATCGAGCGCACCTATCGCCGACA CTTCCTCAGGCACGTCACGGTTCCATCGGGGACCAAGTTGCGCAGGCAGT GCGCAACTCGAACGTAAAGTACCATAACCCTGTTGCCTCGGCCCAGGCTT CCTCCAATAATCCTTCAACAGGAAGTACAAAAAATACGAGAATAACGAAT AACCCTCATAATGCCAAACCACGCAAAACGTCCCGCGCGTAAAACAGACG AACCGCCGCCCAGACTCTGACCGCCGCTGCGTTCCGTGGGTACTTGGCCC GCGTCGGCGCCCGGAAGGACAAAACTCACCGGAGCAGCGCGGCAACGTTC GTGGCGAGGGCTTGGCGCCGGCGGATGTACCGGCTAGGCCTCGCGACTGT GAAGTTTCAAGCGATCATGCGAGGGGCCCAAGGAAGGCGCAAGGCTAGAG AGATTCGGGTCTTGATCCGGCACACCATCTCGGCGCAGTCGGTGGTGAGG AAGAGAGTGGGGTATTGAAGGGAGGGGAGTGTGTTGGATCTGAGGGATGC GGAAGGGGGCCACCCAAAGCTAGAGAGAGCTGGAAAATCCTTTGTGAACC ACCACCCTCTGCGGATGATGAAAGTTTGGCCATGCCCCTAACTGAGACGG GAGGGGTCCCGATCCGACCTCCTTTGTCTAACCATGCGATATACCGGTTC CGGGAACGTCGGACTTGGAAACAGGTCCGCATGTTCCTGGCAAAGCGAAC GGCCCAACGAATGCGTCTCGAGGAGGCCTCTGCTGGACTCCTACAGGCAT TGCAGAGGGGCTTCGTTTTGAGGAGGGTGAGAGCGACGGCGATCTCGGAG ATTCACACTAGCCTGTGGTGGGCGGCCCTAGGTACGTGAAGACATCAAGT CTGCCTTTGTTTGTTGTACACATAGGCATTTATTCGAATGTGCGGCGGTT CTTCAAAGGGTGCCTCTGCTTGTCGTCGTTGAAGTTGTTGTTGGTGTCGA TGTCTTCGCATTCAGGGTCTCCCATGTCTTCATGACTGACCCCAGGCTAG TAAGGCAGACAACAGGGCAGATCCCGCTCGAACTGCAGCAACGGCCCGAG CCAAGACCTATATCAAAACATGCATTGCCACATCGTACTATCCAGCCCCC TGGTTTCCCACACTCCAATGCCTTGGGTATTTCCGTAGTGCAGCTACCAC GGCATGACGTCGTTGGCCACACTATTGGTGATATCACTGCTTCTCCGTCC CCCCTCGGCCTTCAGAGGGTGGATTGATGAGGGAGGCATATTGGTTTTGC GACGTGAAAAGTACTTGGCTCAGTGTGTCACTGTATGCGGCAACATGCCT CGTTCTTTCCGTGCATCAGCACGCGCCCCGCCTACTATAGGCCCTTTCTG GCGTATCGCCTCGTTTCGTAACTTATCCTGTCAAAACACAGCGATTTTCA GGGGCCAACCTTTGAGTAAGCCACCACCCCCTTCCAGCAACATACACTCC GGTTCTCACCCCGACACATCGAGCGCTTACCCCCAGTGCGTGTGACAAGC AAACGCGTCAATTTAGCCCCACGACGCTCTCTGTCGTGTCGTCACAAAAA CGAGTTGCAGGGCTCAACCGTGTGGCCCGAGGCTTCTTGCACCGGCGCTT CGCCGGGATGGTGAGGCAGTTCGCCGTGGACGGGGAGATAACCCGGTGCG AGGCGGAGGCGGCGGCGGTAGGAGGAGCTGTGCGACTGGCGACCACGAGG GCCGACATGTACTTGAAGGTAAGAGAGTGCTAGATAGGAGGGAGACCAGG CGCTCGGTCGTCACCCATTGACGGCATCCACGTTTGCCCAAAGTCCACCA ATGACCTACTGTCACATCACCCACCCAGAATCACACAACAACAACAACAA CAACCGTAACAAACATCTACTCCTTCTCCTCCTGCAACTGGTGGCGTGCA GACAGCCGCAGGAAAAGTTGAACTAGCGCAGGAGATGAGGCGCGCGAACG CTGCCGTCGTTCGAACCAAGATCCTGATGCGAGGCGCGTCTCCGGAGGAG CGTCGACGAGCGAGCGCACACGATGTGTTCGACTCTTTCGACCTCGACGG CTCGGGCACCATCGATGTGAGACGGGGGTCTCGAGCCAGGGGGAGTGCGA AAGAGGGAACAAACTCTCGGCCACCGTTGCCGGGGTACTTTTTCCCGCAG TCGCAGTTGGTGCAAAGTACTATTGCGAAATATTGCACCGGGACGTCAGG CATAAATGATGCGTTGCGTTTGAGTCAAGGCGTATCGGCTCAAAGATACC AGTCCGTCCAAGTCGTTCCCTTCCATCCCCCTTCCCATACCCCGTCGAAC CCCCATGAACCATCGTTCATCCCTCTTCACTCTAGAATGATCGACCCAGC CATACCAAACAAAATGACCTCGCAAGTGTTGCGTGCCCTCAACCCACTCA GCACACGGAGCTAAAGGCCCTGCTAGCCGCTCTGGGCGTTGCGATCACCG ACGCGGAACTGAAGGTAACGTCGGTCGCCGTCGATGCCGACGGCAGCGGG GAGATCAGTTTCTCCGAGTTCTACGCTTGGTTCGGTGGTGGTGGCTTCCA TGTCGGCGGTGATTACGGCGGAGGTGACGCCATCGGGGTTCGTGGAGTGA CGAGCGACACATCAGAGAGCTGGAGTCGTCGCAGCAGTCGAAGCCTTTCC ACTGCGAGAAGTGGGATGGACGAGTCCACCGCGGCGTTGACATCCGGGTA TCGATCAGCCGACGGAAACGGGGGGCTGAGACAAACGGCTCGAAAAAGTT TTGTCAAGGTGGCCACCGCTTCGAAATCCCAGGGTTATTGCATCTGAAGT AGTTTATGGCGTGGCGAACAAATGACGATGGCATTCTCAGCGTCTGTGCG TTCGCTTGGCTAGACAAGAAGTGGAAGTAGCTGAACATGAACGAACGTTG TCGTTCCTTGATGAAGGCACGCCTGTTTTTGTCTACTATTGAACTGTGTC AGACACCGCGAGAGAACCTACCTTTCTTACTTACCGGGGGGACCGATCCC GACCTTTGAATTTCGTTGAATTGAATGTTTCACCGCCCCTCACCCTAAGG AAAAAAAATACAGAACATAATCCAAGGCCCCAAGCATCTAGTTTGGTCCC AATACCGGTTCGCCGCGCTTGCCGTTTTAGTTGTTCCTCCCACGAACGCA TCCTTCGAACTACCTTTCTCTCCGGTCACACGCCAGCACGTGCCCTATAT ACAACTCGTGCCCTTTGACAGGTACGCCGAAACCTCCGAGCGGCCACGGG CATGGCCTTGCAGGACCGGGCCCGTCGGAGCGTCGTCCGTCGTTGGGTGT CCTCGGCCGCCCGGGAAGCGCAGGTATCGAGAATGCCTCCGTACTGTGTA TCGCAGGTTCTGGCTTTCAAACGATGGCGTGACTTGTTTGAATGAAAGAG GGAAGAGGGACGACTACATCTGCAGTCGCGAGTGCCTCGAGTTGAGATGC TGGTTTTGTGTAAGTGTGGCCGGCGAGTGAGTGCTTCATGCGAGGGCTTT CGTCCACTCGCCTTCAAACGGTTGCAAGGCTTCTCAAAACCTAAAATTTT GGTATGCTGAGGTCTACTCCTGGAGTAGCAAGCGAGCCAAGAGCCCGAGA ATGCCACCTGCTAGGAATTTAAATGCAAAGGTCTCTGCACGTACACGCTG GAAGGCACTGCGTTCGGCTTCTGAACATGTTGTCCTCAATAACCTACTCT CGTGAAGAACTTTTCGACTCCTCCTCCCCCCCCTCCTTTCCATATTACCC TCTCGTTACCACGGAAGGTACGATTCCGAGAGGCTCGGCCCCCTACCCTG GAGTGCTGCGCATGCCACCAGGCCTTCGCTCTATACGGTGACTACTGGCG GCACTTCGGGGGCGGCAGGTACACAGGGTGA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig82:693876..703306+

>mRNA_E-siliculosus-1a_M_contig82.16444.1 ID=mRNA_E-siliculosus-1a_M_contig82.16444.1|Name=mRNA_E-siliculosus-1a_M_contig82.16444.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=5532bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:693876..703306+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGAGTAAGACTGCCACTCCCATCGCTACGGCCGCTGCCGCCAACGCCGC
CGCCAAGAAACACCGCCAAAATGACGACGACGCAAGGCTCATCAAGCTCG
GCCGCGAGCGAGACTTGTCGACAGCGCCGGCGTGGATCGGTTTCCCGGGT
CTGTCCGGGGTCGACCTCACGCAGACTCAGACCTTCCCCGTTGACAAGAA
AGCCCGGCCTCGGAAGCGGCGGTGGGGTGAAGACTGGCGGGAGCTCGTCA
TCGGGGCGTCCCCCTACAATAAGATGAGTAAGACTGCCACTCCCATCGCT
ACGGCCGCTGCCGCCAACGCCGCCGCCAAGAAACACCGCCAAAATGACGA
CGACGCAAGGCTCATCAAGCTCGGCCGCGAGCGAGACTTGTCGACAGCGC
CGGCGTGGATCGGTTTCCCGGGTCTGTCCGGGGTCGACCTCACGCAGACT
CAGACCTTCCCCGTTGACAAGAAAGCCCGGCCTCGGAAGCGGCGGTGGGG
TGAAGACTGGCGGGAGCTCGTCATCGGGGCGTCCCCCTACAATAAGGCGG
CGGCGAAGGCGCGGGCGGGCAGACGGGCCAGGGCCGAGAGGGGGGCGTCC
ACAGCGGCGGACGCTCGAGCGGAGATTGAAGAGAAGGCGGCGGCGAAGGC
GCGGGCGGGCAGACGGGCCAGGGCCGAGAGGGGGGCGTCCACAGCGGCGG
ACGCTCGAGCGGAGATTGAAGAGAAGGTGTCCACGAGTCTGCTTGGCGTC
GTTCCAGAGGAGTTTTGTCGTGACGCACCGCCAGCGGTAGAGCCGCCGTC
GTCGTGGTCGCCGAAAGCAGCGGCTGTGGCAGCAGGAGTTAGGGCAACCA
ATAGCGCAGAGGATGCCGCCGAGGGCGTGGGAAGTGGGAGACGGCCGATC
AAGATCGCTGTGGAAAGTTCTACTACGACCGGCTCAAGGTGTCCACGAGT
CTGCTTGGCGTCGTTCCAGAGGAGTTTTGTCGTGACGCACCGCCAGCGGT
AGAGCCGCCGTCGTCGTGGTCGCCGAAAGCAGCGGCTGTGGCAGCAGGAG
TTAGGGCAACCAATAGCGCAGAGGATGCCGCCGAGGGCGTGGGAAGTGGG
AGACGGCCGATCAAGATCGCTGTGGAAAGTTCTACTACGACCGGCTCAAG
ATATGCTTCCCCTTCGCTAGCTGCCCCTGCTGCTACTGGAGGTGGTGAAT
ACGTTGTGGCTGGCGCCGCCCACCAGAGCGGCCTCCCGACGAAAGCCTCC
GGGCCGCCCCGCTCAGACCAACAACAACAGCACGCGTCAAGACCAAAGCG
TCAGCGCGGAGCGACCGCCACCGCCACGGCCAGCGGTGATGGCGAAAGGA
ACTACGGAGAGAGATCTCGACGTCGTCTCGCTGCTTTTCTAGAAGGCCAG
GCTTCGGCCACGACGGCAGCGGCAGCAGATATGCTTCCCCTTCGCTAGCT
GCCCCTGCTGCTACTGGAGGTGGTGAATACGTTGTGGCTGGCGCCGCCCA
CCAGAGCGGCCTCCCGACGAAAGCCTCCGGGCCGCCCCGCTCAGACCAAC
AACAACAGCACGCGTCAAGACCAAAGCGTCAGCGCGGAGCGACCGCCACC
GCCACGGCCAGCGGTGATGGCGAAAGGAACTACGGAGAGAGATCTCGACG
TCGTCTCGCTGCTTTTCTAGAAGGCCAGGCTTCGGCCACGACGGCAGCGG
CAGCAGACGGGGGCGCAGTCGGAGGTGGTGGCCGTGCCGAACAAGGAGAG
CCATGCGACGGGAGCATCAGACGGGGGCGCAGTCGGAGGTGGTGGCCGTG
CCGAACAAGGAGAGCCATGCGACGGGAGCATCAGCGCCGTCACCGCCGGG
CGCAGGGACCAAACCTTCGGGCTGGGGGGGGACGCGCTGGCGCCGACCCC
GCCCTCCCAGAGCATGACCGCCAACTTTGTCGGCCTCCTCGAGGGCTCGC
TCGGCCTCGGCGTGTGGACCGACCCCGTCGCATCCCAGTTGGCGAGGCCC
CTGAACGCCTTTCTCGCCTACCTTCCTCCAGAGGGCGCACGGCGCCGTCA
CCGCCGGGCGCAGGGACCAAACCTTCGGGCTGGGGGGGGACGCGCTGGCG
CCGACCCCGCCCTCCCAGAGCATGACCGCCAACTTTGTCGGCCTCCTCGA
GGGCTCGCTCGGCCTCGGCGTGTGGACCGACCCCGTCGCATCCCAGTTGG
CGAGGCCCCTGAACGCCTTTCTCGCCTACCTTCCTCCAGAGGGCGCACGG
CTGTTCGACGAGTCTGGTCGTCGCTTCACGCCCCACGGCGGCAACCACGA
AGCCGAAGCGAACCCCCCCCCGGACAATGAGCCCTCCGCGGCGCACGCAA
CATCCCCGGACGGGAAGAAGAAAAAGACATCAACGGCGACGGCGACAACG
ACCAGCGGCATCAAAGCGGCGCCAACCGGAGCCGGAAGAGCCCCCACAAC
GCAGGGAGCCGCGTGTATTTCGGCACCCGGTACTGCTGCGTCGTCGCTCC
TCACCGTCACGATGGAGCGCGGGACCGCGGAGGAGGCGCCCCGCGCGGTC
TGGCTCGGGCGGGTCGCGGCGGTGATGGAGGCCAGGGGGGACCGGGACGA
GGCGGTCCGGCTCTACGGGGAGGCGGCGGCAGAGCTCACGGGGAAAAGAG
TAGGGGCCAGTCGCAATGGCTCTCGTGACGGTAGTGGTGGCACTGCGAGC
TCATGCCCCTCTGCTGCGGGAATGGGTCGCTCCACCCAACTCGGGGGCGG
CGATTGCGGCGTTGGTGCTGGAGCCGGCCCGGACTTGTTCCCGTACTCTG
CTAGAGCCCACTACCTCGCTTCCATCATCGAGCGCACCTATCGCCGACAC
TTCCTCAGGCACGTCACGGTTCCATCGGGGACCAACTGTTCGACGAGTCT
GGTCGTCGCTTCACGCCCCACGGCGGCAACCACGAAGCCGAAGCGAACCC
CCCCCCGGACAATGAGCCCTCCGCGGCGCACGCAACATCCCCGGACGGGA
AGAAGAAAAAGACATCAACGGCGACGGCGACAACGACCAGCGGCATCAAA
GCGGCGCCAACCGGAGCCGGAAGAGCCCCCACAACGCAGGGAGCCGCGTG
TATTTCGGCACCCGGTACTGCTGCGTCGTCGCTCCTCACCGTCACGATGG
AGCGCGGGACCGCGGAGGAGGCGCCCCGCGCGGTCTGGCTCGGGCGGGTC
GCGGCGGTGATGGAGGCCAGGGGGGACCGGGACGAGGCGGTCCGGCTCTA
CGGGGAGGCGGCGGCAGAGCTCACGGGGAAAAGAGTAGGGGCCAGTCGCA
ATGGCTCTCGTGACGGTAGTGGTGGCACTGCGAGCTCATGCCCCTCTGCT
GCGGGAATGGGTCGCTCCACCCAACTCGGGGGCGGCGATTGCGGCGTTGG
TGCTGGAGCCGGCCCGGACTTGTTCCCGTACTCTGCTAGAGCCCACTACC
TCGCTTCCATCATCGAGCGCACCTATCGCCGACACTTCCTCAGGCACGTC
ACGGTTCCATCGGGGACCAAACGAACCGCCGCCCAGACTCTGACCGCCGC
TGCGTTCCGTGGGTACTTGGCCCGCGTCGGCGCCCGGAAGGACAAAACTC
ACCGGAGCAGCGCGGCAACGTTCGTGGCGAGGGCTTGGCGCCGGCGGATG
TACCGGCTAGGCCTCGCGACTGTGAAGTTTCAAGCGATCATGCGAGGGGC
CCAAGGAAGGCGCAAGGCTAGAGAGATTCGGGTCTTGATCCGGCACACCA
TCTCGGCGCAGTCGGTGACGAACCGCCGCCCAGACTCTGACCGCCGCTGC
GTTCCGTGGGTACTTGGCCCGCGTCGGCGCCCGGAAGGACAAAACTCACC
GGAGCAGCGCGGCAACGTTCGTGGCGAGGGCTTGGCGCCGGCGGATGTAC
CGGCTAGGCCTCGCGACTGTGAAGTTTCAAGCGATCATGCGAGGGGCCCA
AGGAAGGCGCAAGGCTAGAGAGATTCGGGTCTTGATCCGGCACACCATCT
CGGCGCAGTCGGTGGTCCGCATGTTCCTGGCAAAGCGAACGGCCCAACGA
ATGCGTCTCGAGGAGGCCTCTGCTGGACTCCTACAGGCATTGCAGAGGGG
CTTCGTTTTGAGGAGGGTGAGAGCGACGGCGATCTCGGAGATTCACACTA
GCCTGTGGTGGGCGGCCCTAGGTCCGCATGTTCCTGGCAAAGCGAACGGC
CCAACGAATGCGTCTCGAGGAGGCCTCTGCTGGACTCCTACAGGCATTGC
AGAGGGGCTTCGTTTTGAGGAGGGTGAGAGCGACGGCGATCTCGGAGATT
CACACTAGCCTGTGGTGGGCGGCCCTAGGGCTCAACCGTGTGGCCCGAGG
CTTCTTGCACCGGCGCTTCGCCGGGATGGTGAGGCAGTTCGCCGTGGACG
GGGAGATAACCCGGTGCGAGGCGGAGGCGGCGGCGGTAGGAGGAGCTGTG
CGACTGGCGACCACGAGGGCCGACATGTACTTGAAGGGCTCAACCGTGTG
GCCCGAGGCTTCTTGCACCGGCGCTTCGCCGGGATGGTGAGGCAGTTCGC
CGTGGACGGGGAGATAACCCGGTGCGAGGCGGAGGCGGCGGCGGTAGGAG
GAGCTGTGCGACTGGCGACCACGAGGGCCGACATGTACTTGAAGACAGCC
GCAGGAAAAGTTGAACTAGCGCAGGAGATGAGGCGCGCGAACGCTGCCGT
CGTTCGAACCAAGATCCTGATGCGAGGCGCGTCTCCGGAGGAGCGTCGAC
GAGCGAGCGCACACGATGTGTTCGACTCTTTCGACCTCGACGGCTCGGGC
ACCATCGATACAGCCGCAGGAAAAGTTGAACTAGCGCAGGAGATGAGGCG
CGCGAACGCTGCCGTCGTTCGAACCAAGATCCTGATGCGAGGCGCGTCTC
CGGAGGAGCGTCGACGAGCGAGCGCACACGATGTGTTCGACTCTTTCGAC
CTCGACGGCTCGGGCACCATCGATCACACGGAGCTAAAGGCCCTGCTAGC
CGCTCTGGGCGTTGCGATCACCGACGCGGAACTGAAGCACACGGAGCTAA
AGGCCCTGCTAGCCGCTCTGGGCGTTGCGATCACCGACGCGGAACTGAAG
GTACGCCGAAACCTCCGAGCGGCCACGGGCATGGCCTTGCAGGACCGGGC
CCGTCGGAGCGTCGTCCGTCGTTGGGTGTCCTCGGCCGCCCGGGAAGCGC
AGGTACGCCGAAACCTCCGAGCGGCCACGGGCATGGCCTTGCAGGACCGG
GCCCGTCGGAGCGTCGTCCGTCGTTGGGTGTCCTCGGCCGCCCGGGAAGC
GCAGGTACGATTCCGAGAGGCTCGGCCCCCTACCCTGGAGTGCTGCGCAT
GCCACCAGGCCTTCGCTCTATACGGTGACTACTGGCGGCACTTCGGGGGC
GGCAGGTACACAGGGTGAGTACGATTCCGAGAGGCTCGGCCCCCTACCCT
GGAGTGCTGCGCATGCCACCAGGCCTTCGCTCTATACGGTGACTACTGGC
GGCACTTCGGGGGCGGCAGGTACACAGGGTGA
back to top