prot_E-siliculosus-1a_M_contig82.16421.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig82.16421.1
Unique Nameprot_E-siliculosus-1a_M_contig82.16421.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length376
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16421.1 vs. uniprot
Match: A0A6H5JNY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY8_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 7.500e-84
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 0 
Query:  228 MGVAKVKSGSIPLIALKRCYSGYPKSNFPTKSMQARATPLPDRSKTFTIQVDTGTVYVFVTTDDIHKKLVKGLQSVIDEISSPDSFYFDATGVLRRVTSSIFDDRGNVAQREAMKKERQARFKFRQAEAEERLEPLRPKV 367
            MGVAKVKSGSIPLIALK CYSGYPKSNFPTKSMQARATPLPDRSKTFTIQVDTG VYVFVTTDDIHKKLVKGLQSVIDEISSPDSFYFDATGVLRRVTSSIFDDRGNVAQREAMKKERQARFKFRQAEAEERLEPLRPK 
Sbjct:    1 MGVAKVKSGSIPLIALKVCYSGYPKSNFPTKSMQARATPLPDRSKTFTIQVDTGKVYVFVTTDDIHKKLVKGLQSVIDEISSPDSFYFDATGVLRRVTSSIFDDRGNVAQREAMKKERQARFKFRQAEAEERLEPLRPKA 140
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BLAST of mRNA_E-siliculosus-1a_M_contig82.16421.1 vs. uniprot
Match: D7FWH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWH6_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 3.300e-83
Identity = 137/139 (98.56%), Postives = 137/139 (98.56%), Query Frame = 0 
Query:  228 MGVAKVKSGSIPLIALKRCYSGYPKSNFPTKSMQARATPLPDRSKTFTIQVDTGTVYVFVTTDDIHKKLVKGLQSVIDEISSPDSFYFDATGVLRRVTSSIFDDRGNVAQREAMKKERQARFKFRQAEAEERLEPLRPK 366
            MGVAKVKSGSIPLIALKRCYSGYPKSNFPTKSMQARATPLPDRSKTFTIQVDTG VYVFVTTDDIHKKLVKGLQSVIDEISSPDSFYFDATGVLRRVTSSIFDDRGNVAQREAMKKERQARFK RQAEAEERLEPLRPK
Sbjct:    1 MGVAKVKSGSIPLIALKRCYSGYPKSNFPTKSMQARATPLPDRSKTFTIQVDTGKVYVFVTTDDIHKKLVKGLQSVIDEISSPDSFYFDATGVLRRVTSSIFDDRGNVAQREAMKKERQARFKLRQAEAEERLEPLRPK 139
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig82.16421.1 vs. uniprot
Match: A0A835YRN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRN6_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.680e-32
Identity = 81/214 (37.85%), Postives = 120/214 (56.07%), Query Frame = 0 
Query:   95 VSQYWQNYDLSISEAPKLFSDAEFQAVKRIQGGLKVLVLRKRLQERITARNREREVRAAVRVQAIFRGIATRASLPALREQHSVSARLKRTYKLFKRELRSEGFPIHLYRTKDGALRRVILKPDNKLTSLCWSMGVAKVKSGSIPLIALKRCYSGYPKSNFPTKSMQARATPLPDRSKTFTIQ-VDTGTVYVF-VTTDDIHKKLVKGLQSVIDE 306
            V+ YWQNYDLS S  P LF   +  +V  ++ GL  +++R  +Q RI +++R  + RAA R+QA+ R       LP L        +L    + FKREL   G P+  +  + G ++  +L+P+    +L W    A  K  S+PLI LK CY+GYP++ FPT +M AR T LPD  + FT+Q  DTG   VF V        +V+GLQ++++E
Sbjct:   56 VANYWQNYDLSTSTEPDLFKPEDLSSVMILKSGLNAMLMRLHVQRRIDSKDRRHQDRAATRIQALARQWLVMRRLPELAAAIEKHIKLTGNIRRFKRELLERGVPLGEFNCESGGVQSALLRPNASRNALIWRKN-ALSKDASVPLIKLKACYAGYPRTGFPTPAMVARRTRLPDAERAFTLQREDTGASVVFLVRAAKDRAAVVRGLQAIVNE 268
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JNY8_9PHAE7.500e-8497.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWH6_ECTSI3.300e-8398.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YRN6_9STRA3.680e-3237.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 149..177
score: 8.261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig82contigE-siliculosus-1a_M_contig82:481344..484589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig82.16421.1mRNA_E-siliculosus-1a_M_contig82.16421.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig82 481344..484589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig82.16421.1 ID=prot_E-siliculosus-1a_M_contig82.16421.1|Name=mRNA_E-siliculosus-1a_M_contig82.16421.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=376bp
MSSLFVSTAELKRNLAVDRDRGEPSDKEIALSDDGSEGDMGIEYQSSFAG
SSESDSQRASQSGDGEEGSAGFFEGVFGGGPGGVGNGAEGGDGEVSQYWQ
NYDLSISEAPKLFSDAEFQAVKRIQGGLKVLVLRKRLQERITARNREREV
RAAVRVQAIFRGIATRASLPALREQHSVSARLKRTYKLFKRELRSEGFPI
HLYRTKDGALRRVILKPDNKLTSLCWSMGVAKVKSGSIPLIALKRCYSGY
PKSNFPTKSMQARATPLPDRSKTFTIQVDTGTVYVFVTTDDIHKKLVKGL
QSVIDEISSPDSFYFDATGVLRRVTSSIFDDRGNVAQREAMKKERQARFK
FRQAEAEERLEPLRPKVCLLCFESN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS