mRNA_E-siliculosus-1a_M_contig80.16264.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig80.16264.1
Unique NamemRNA_E-siliculosus-1a_M_contig80.16264.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig80.16264.1 vs. uniprot
Match: D7FP79_ECTSI (Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP79_ECTSI)

HSP 1 Score: 1150 bits (2976), Expect = 0.000e+0
Identity = 576/585 (98.46%), Postives = 579/585 (98.97%), Query Frame = 1
Query:    1 MSGRKFFVGGNWKCNGSVSKVDELVGVLNASNITSTTEVVVAPPSVYLHGVSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGLTMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVFGEMDPANIKWGDAGADYVVESTGAFTGIDTAGKHMSGGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDKAASYDDIKGAIKEASEGSMEGVLGYTEEQVVSSDFLSNPYSSVFDAGAGIALSDDFVKVVSWYDNEMGYSTRVVDLIGHGSAE 1755
            MSGRKFFVGGNWKCNGSVSKVDELVGVLNASNITS TEVVVAPPSVYLHGVSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESG TMDVVIGQLKAYAA+VKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVFGEMDPANIKWGDAGADYVVESTGAFTGIDTAGKHMSGGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDKAASYDDIKGAI+EASEGSM GVLGYTEEQVVSSDFLSNPYSSVFDAGAGIALSDDFVKVVSWYDNEMGYSTRVVDLI H + E
Sbjct:    1 MSGRKFFVGGNWKCNGSVSKVDELVGVLNASNITSNTEVVVAPPSVYLHGVSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGSTMDVVIGQLKAYAASVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVFGEMDPANIKWGDAGADYVVESTGAFTGIDTAGKHMSGGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDKAASYDDIKGAIREASEGSMAGVLGYTEEQVVSSDFLSNPYSSVFDAGAGIALSDDFVKVVSWYDNEMGYSTRVVDLIAHMAKE 585          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16264.1 vs. uniprot
Match: A0A0A6YYW1_DICDH (Mitochondrial triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Dictyota dichotoma TaxID=2876 RepID=A0A0A6YYW1_DICDH)

HSP 1 Score: 1009 bits (2609), Expect = 0.000e+0
Identity = 499/582 (85.74%), Postives = 531/582 (91.24%), Query Frame = 1
Query:   10 RKFFVGGNWKCNGSVSKVDELVGVLNASNITSTTEVVVAPPSVYLHGVSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGLTMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVFGEMDPANIKWGDAGADYVVESTGAFTGIDTAGKHMSGGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDKAASYDDIKGAIKEASEGSMEGVLGYTEEQVVSSDFLSNPYSSVFDAGAGIALSDDFVKVVSWYDNEMGYSTRVVDLIGHGSAE 1755
            RKFFVGGNWKCNGS+SKVDELVGVLN S++TS TEVVVAPPSVYL GVS  +RGDVKV+AQDCW  GNGA+TGETSADMLKDMG+ WCIIGHSERRQKGE +EEC  KA YA E G+SV+GCIGE+KEERESG TMDVV  Q+ AY ATVKDWDKFV+AYEPVWAIGTGLTASPEQAQEVH  LRKW+AENVSA+VADKVRIIYGGSVNAG+APTLG K DIDGFLVGGASLKPEFVEIVNAKDGSKSVGPV+VGINGFGRIGRLVLRASLKNPMVNVVSINDPFID  YMEYMFKYDTVHGVY GEV+HDGEHLIVDG  IK+  EMDP+ I WGD+GADYVVESTGAFT ++ AGKHM GGAK VVISAPS DAPMFVMGVN EKYTPDM VVSNASCTTNCLAPVAKVIND FGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGR AG+NIIPSSTGAAKAVGKVIPELNGKLTGM+FRVPTADVSVVDLTCRL K ASYDD+K AIKEA+ G MEG+LGYTEE VVSSDF+S+PYSSVFDA AGIAL+DDFVKVVSWYDNEMGYSTRVVDLI H + E
Sbjct:   30 RKFFVGGNWKCNGSLSKVDELVGVLNGSHLTSKTEVVVAPPSVYLQGVSSNMRGDVKVAAQDCWLKGNGAFTGETSADMLKDMGIEWCIIGHSERRQKGEMDEECGAKAGYAIEKGISVIGCIGETKEERESGATMDVVKRQMAAYTATVKDWDKFVVAYEPVWAIGTGLTASPEQAQEVHLELRKWIAENVSAAVADKVRIIYGGSVNAGTAPTLGEKADIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVTVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDAKYMEYMFKYDTVHGVYPGEVSHDGEHLIVDGVSIKLHAEMDPSKISWGDSGADYVVESTGAFTTVEKAGKHMDGGAKNVVISAPSADAPMFVMGVNQEKYTPDMRVVSNASCTTNCLAPVAKVINDNFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRAAGYNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTADVSVVDLTCRLSKPASYDDVKAAIKEAAAGPMEGILGYTEEAVVSSDFISDPYSSVFDATAGIALTDDFVKVVSWYDNEMGYSTRVVDLIAHMAKE 611          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16264.1 vs. uniprot
Match: A0A0A6YYW3_SACLA (Mitochondrial triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=1 Tax=Saccharina latissima TaxID=309358 RepID=A0A0A6YYW3_SACLA)

HSP 1 Score: 984 bits (2543), Expect = 0.000e+0
Identity = 486/532 (91.35%), Postives = 510/532 (95.86%), Query Frame = 1
Query:    1 MSGRKFFVGGNWKCNGSVSKVDELVGVLNASNITSTTEVVVAPPSVYLHGVSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGLTMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVFGEMDPANIKWGDAGADYVVESTGAFTGIDTAGKHMSGGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDKAASYDDIKGAIKEASEGSMEGVLGYTEEQV 1596
            MSGRKFFVGGNWKCNGSV+KV+ELVGVLNASNITS TEVVVAPPSVYLHGVSQKLRGDVKV+AQDCWT GNGA+TGETSADMLKDMGV WCIIGHSERRQKGET+ ECA KAAYAQEHGLSVMGCIGESKEERESG TMDVV+ Q+ AYA +VKDWD FV+AYEPVWAIGTGLTASPEQAQEVHEGLRKW+AENVSASVA+K+RIIYGGSVNAGSAPTLG+K DIDGFLVGGASLKPEFV+IVNAKDGSKSVGPV+VGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDT YMEYMFKYDTVHGV+DGEV+HDGE+LIVDGTKIKVF EMDPA I+WG AGA+YVVESTGAFTGIDTAG HM GGAKKVVISAPSGDAPMFVMGVNH+KYTPDM VVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLD+ A+YDDIK AIKEASEGSM GVLGYTE+ V
Sbjct:   27 MSGRKFFVGGNWKCNGSVAKVEELVGVLNASNITSNTEVVVAPPSVYLHGVSQKLRGDVKVAAQDCWTKGNGAFTGETSADMLKDMGVNWCIIGHSERRQKGETDAECAAKAAYAQEHGLSVMGCIGESKEERESGSTMDVVLRQMAAYAGSVKDWDNFVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVSASVAEKIRIIYGGSVNAGSAPTLGAKADIDGFLVGGASLKPEFVDIVNAKDGSKSVGPVTVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTKYMEYMFKYDTVHGVFDGEVSHDGENLIVDGTKIKVFNEMDPAKIQWGSAGAEYVVESTGAFTGIDTAGAHMKGGAKKVVISAPSGDAPMFVMGVNHDKYTPDMAVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDRPATYDDIKAAIKEASEGSMAGVLGYTEDAV 558          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16264.1 vs. uniprot
Match: A0A835ZGW0_9STRA (Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW0_9STRA)

HSP 1 Score: 877 bits (2266), Expect = 4.160e-316
Identity = 435/581 (74.87%), Postives = 492/581 (84.68%), Query Frame = 1
Query:   10 RKFFVGGNWKCNGSVSKVDELVGVLNASNITSTTEVVVAPPSVYLHGVSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGLTMDVVIGQLKAYAATV---KDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVFGEMDPANIKWGDAGADYVVESTGAFTGIDTAGKHMSGGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDKAASYDDIKGAIKEASEGSMEGVLGYTEEQVVSSDFLSNPYSSVFDAGAGIALSDDFVKVVSWYDNEMGYSTRVVDLIGH 1743
            RKF VGGNWKCNGS+++  ELVG+LNAS++ S TEVV++PPS+YL  V+  +R DV VS+QDCWTG NGA+TGETSADMLKDMGV W I+GHSERRQKGET+E CA KAAYA   GL VM CIGE++EERE+G TM+VV+ Q+ AY   +   K +D FV+AYEPVWAIGTGL A+PE+AQ+VH+GLR WVA N+S+ VA K+RI+YGGSV A SAP+L S+PDIDGFLVGGASLKPEFV IVNA+  S S GPV VGINGFGRIGRLVLRASL NPMVNVV+INDPFID  YMEYMFKYDTVHG Y G V HD EHLIVDG KIK+  +MDP  I WG + A YVVESTGAFT + TA  H  GGA+KV+ISAPSGDAPMFVMGVNH  Y P M +VSNASCTTNCLAP+ KVI+D FG++EGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPE+NGKLTGMSFRVPTADVS VDLT RL K ASYD IK  ++EASEG M+G+LGYTEE VVSSDF+SNP SS+FDA AGIAL+D+FVK+VSWYDNEMGYS RVVDLI H
Sbjct:   24 RKFIVGGNWKCNGSIAQTKELVGILNASSLASDTEVVISPPSLYLQSVASSIRPDVAVSSQDCWTG-NGAHTGETSADMLKDMGVQWTIVGHSERRQKGETDELCAKKAAYAISKGLKVMACIGETREEREAGKTMEVVVRQMAAYKKHLDSSKAFDAFVVAYEPVWAIGTGLVATPEEAQQVHKGLRDWVANNISSDVAAKLRIMYGGSVTAASAPSLASQPDIDGFLVGGASLKPEFVSIVNAQGSSGSAGPVRVGINGFGRIGRLVLRASLANPMVNVVAINDPFIDPKYMEYMFKYDTVHGAYKGTVAHDDEHLIVDGFKIKIHNQMDPGAIPWGASDAKYVVESTGAFTALATAAAHHKGGAEKVIISAPSGDAPMFVMGVNHALYEPHMAIVSNASCTTNCLAPLTKVIHDNFGIEEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPEMNGKLTGMSFRVPTADVSCVDLTIRLKKGASYDTIKDTVREASEGPMKGILGYTEEAVVSSDFISNPLSSIFDANAGIALNDNFVKLVSWYDNEMGYSHRVVDLIQH 603          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16264.1 vs. uniprot
Match: A0A485KYA8_9STRA (Aste57867_13505 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYA8_9STRA)

HSP 1 Score: 825 bits (2131), Expect = 1.070e-295
Identity = 415/580 (71.55%), Postives = 482/580 (83.10%), Query Frame = 1
Query:   10 RKFFVGGNWKCNGSVSKVDELVGVLNASNITSTTEVVVAPPSVYLHGVSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGLTMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAK-DGSKSVG-PVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVFGEMDPANIKWGDAGADYVVESTGAFTGIDTAGKHMSGGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDKAASYDDIKGAIKEASEGSMEGVLGYTEEQVVSSDFLSNPYSSVFDAGAGIALSDDFVKVVSWYDNEMGYSTRVVDLIGH 1743
            RKFFVGGNWKCNGS+++ + LV  LN + I S  EVVVAP SV++  V  +LR DV VS QD W  G GA+TGETSADMLKD G  + I+GHSERRQKGE++EE A KAA+A + GLSV+ CIGESK ERE+  T+ VV  QL AYAA VKDW K VIAYEPVWAIGTGLTASP QAQ+VH G+R+W+  NVSA+VA+  RIIYGGSV AG+A  L  + DIDGFLVGGASLKP+F+ I+NAK DG+ SVG PV+V INGFGRIGRLVLRA+  NP++NVV++NDPFI T YMEYM K+DTVHG++ GEV HDG+++ V+G KI+VFGE DPANIKWGDAGA+YVVESTGAFT  D A  H+  GA+KVVISAPS DAPMFV+GVNHE YT D+ +VSNASCTTNCLAP+AKV+++ FG+ EGLMTTVHAVTATQ TVDGPSKKDWRGGRGA FNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTA+VSVVDLT RL  +ASYD+IK AIK ASE  M G+LGYTEE +VSSDF+ +  SS+FDA AGIAL+D+FVK+VSWYDNE GYS RV+DLI H
Sbjct:   16 RKFFVGGNWKCNGSLAQANALVDTLNTATIPSDVEVVVAPSSVHVATVKSRLRKDVAVSGQDVWHKGAGAFTGETSADMLKDAGANYSIVGHSERRQKGESSEEVARKAAHALQQGLSVIACIGESKGEREANQTLKVVTDQLAAYAAHVKDWTKVVIAYEPVWAIGTGLTASPAQAQDVHAGIREWLKNNVSAAVANSTRIIYGGSVTAGNAKELSGQTDIDGFLVGGASLKPDFLHIINAKSDGTTSVGGPVNVAINGFGRIGRLVLRAAQTNPLINVVAVNDPFIPTEYMEYMLKHDTVHGLFKGEVGHDGDYIHVNGQKIRVFGEKDPANIKWGDAGAEYVVESTGAFTTKDKASAHLKNGARKVVISAPSADAPMFVVGVNHELYTKDLDIVSNASCTTNCLAPLAKVVHNQFGIVEGLMTTVHAVTATQLTVDGPSKKDWRGGRGACFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTANVSVVDLTVRLQHSASYDEIKAAIKLASENEMRGILGYTEEAIVSSDFIGDARSSIFDASAGIALTDNFVKLVSWYDNEWGYSNRVLDLISH 595          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16264.1 vs. uniprot
Match: A0A5D6Y8Y2_9STRA (Gp_dh_N domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8Y2_9STRA)

HSP 1 Score: 821 bits (2120), Expect = 8.110e-294
Identity = 405/581 (69.71%), Postives = 478/581 (82.27%), Query Frame = 1
Query:    4 SGRKFFVGGNWKCNGSVSKVDELVGVLNASNITSTTEVVVAPPSVYLHGVSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGLTMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKD-GSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVFGEMDPANIKWGDAGADYVVESTGAFTGIDTAGKHMSGGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDKAASYDDIKGAIKEASEGSMEGVLGYTEEQVVSSDFLSNPYSSVFDAGAGIALSDDFVKVVSWYDNEMGYSTRVVDLIGH 1743
            S RKFFVGGNWKCNGSV +  +LVG+LN + I +  EVVVAP +V+   V + LRGDV+VS QD W+ GNGA+TGETSA+ML+D+G  + ++GHSERR+KGE+N+  A KAAYA   GL V+ CIGE+K +RE+G T++VV  QL AYAA + DW K VIAYEPVWAIGTGLTA+PEQAQ+VH  +R W+A  VS + A+  R+IYGGSV A +A  L  K DIDGFLVGGASLKPEF++I+N +  G++  GPV+V INGFGRIGRLVLRA+  NP++NVV+INDPFI T YMEYM +YDTVHGV++G V HD EH+IV+G KI+VFGE DP +IKWGDAG  YVVESTGAFT  + A  H+SGG +KVVISAPS DAPMFVMGVN   Y P+M VVSNASCTTNCLAP+AKV++D FG+KEGLMTTVHAVTATQ TVDGPSKKDWRGGRGA FNIIPSSTGAAKAVGKVIP LNGKLTGMSFRVPTADVSVVDLT RLDK ASYD+IK A+K ASE  ++G+LGYT+E VVSSDF+ +  SS+FDA AGIAL+DDFVK+VSWYDNE GYS RV+DLI H
Sbjct:   30 SARKFFVGGNWKCNGSVGQAQDLVGLLNTARIPAGVEVVVAPAAVHAAEVKKALRGDVRVSGQDVWSQGNGAFTGETSAEMLQDIGAEYTLVGHSERREKGESNDVVAKKAAYALGKGLGVIACIGETKAQREAGKTVEVVTAQLNAYAAHIADWSKVVIAYEPVWAIGTGLTATPEQAQDVHASIRAWLASTVSTAAAESTRVIYGGSVTAANATELSQKGDIDGFLVGGASLKPEFLQIINCQTPGARVGGPVNVAINGFGRIGRLVLRAAQSNPLINVVAINDPFIPTHYMEYMLRYDTVHGVFNGTVAHDDEHIIVNGKKIRVFGERDPKDIKWGDAGVQYVVESTGAFTTTEKASAHLSGGVEKVVISAPSADAPMFVMGVNEALYKPEMRVVSNASCTTNCLAPLAKVVHDHFGIKEGLMTTVHAVTATQLTVDGPSKKDWRGGRGACFNIIPSSTGAAKAVGKVIPSLNGKLTGMSFRVPTADVSVVDLTVRLDKKASYDEIKAAVKAASENELQGILGYTDELVVSSDFIGDSRSSIFDAHAGIALTDDFVKLVSWYDNEWGYSCRVLDLIEH 610          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16264.1 vs. uniprot
Match: K3WWT6_GLOUD (Gp_dh_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWT6_GLOUD)

HSP 1 Score: 818 bits (2114), Expect = 5.130e-293
Identity = 405/581 (69.71%), Postives = 474/581 (81.58%), Query Frame = 1
Query:    4 SGRKFFVGGNWKCNGSVSKVDELVGVLNASNITSTTEVVVAPPSVYLHGVSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGLTMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVG-PVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVFGEMDPANIKWGDAGADYVVESTGAFTGIDTAGKHMSGGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDKAASYDDIKGAIKEASEGSMEGVLGYTEEQVVSSDFLSNPYSSVFDAGAGIALSDDFVKVVSWYDNEMGYSTRVVDLIGH 1743
            S RKFFVGGNWKCNGSV + ++LVG+LN + I  + EVVVAP SV+   V + LR D++VS QD WT GNGA+TGETSA+MLKD+G  + ++GHSERR+KGE+NE  A KAAYA E GL+V+ CIGE+K +RE   T++VV  QL AYA  +KDW   VIAYEPVWAIGTGLTASP+QAQ+VH  +R W+ + VSA  A   RIIYGGSV A +A  L  K DIDGFLVGGASLKP+F++I+N ++   SVG PV+V INGFGRIGRLVLRA+  NP++N+V+INDPFI T YMEYM +YDTVHGV++G V+HD EH+IV+G KI+VFGE DP +IKW  A   YVVESTGAFT  D A  H+ GG +KVVISAPS DAPMFV+GVN EKY  DM VVSNASCTTNCLAP+AKV+ND FG+KEGLMTTVHAVTATQ TVDGPSKKDWRGGRGA FNIIPSSTGAAKAVGKVIP LNGKLTGMSFRVPTADVSVVDLTCRL+  ASYDDIK A+K ASE  ++G+LGYT+E VVSSDF+ +  SS+FDA AGIAL+DDFVK+VSWYDNE GYS RV+DLI H
Sbjct:   23 SSRKFFVGGNWKCNGSVGQANDLVGLLNTAKIPKSVEVVVAPSSVHASEVKKSLRKDIRVSGQDVWTQGNGAFTGETSAEMLKDIGAEYTLVGHSERREKGESNEIVAKKAAYALEKGLAVIACIGETKTQREQNKTVEVVTEQLNAYAKHIKDWTNVVIAYEPVWAIGTGLTASPQQAQDVHASIRSWLEKTVSADAAKSTRIIYGGSVTAANATELSQKSDIDGFLVGGASLKPDFLKIINCQNPDASVGGPVNVAINGFGRIGRLVLRAAQSNPLINIVAINDPFIPTHYMEYMLRYDTVHGVFNGTVSHDDEHIIVNGKKIRVFGERDPKDIKWSTADVQYVVESTGAFTTTDKASAHLGGGVEKVVISAPSADAPMFVIGVNEEKYQKDMHVVSNASCTTNCLAPLAKVVNDNFGIKEGLMTTVHAVTATQLTVDGPSKKDWRGGRGACFNIIPSSTGAAKAVGKVIPSLNGKLTGMSFRVPTADVSVVDLTCRLENKASYDDIKAAVKSASEKELKGILGYTDELVVSSDFVGDSRSSIFDAHAGIALTDDFVKLVSWYDNEWGYSCRVLDLIEH 603          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16264.1 vs. uniprot
Match: A0A1Z5JDH9_FISSO (Glyceraldehyde 3-phosphate dehydrogenase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDH9_FISSO)

HSP 1 Score: 817 bits (2110), Expect = 2.590e-292
Identity = 405/581 (69.71%), Postives = 472/581 (81.24%), Query Frame = 1
Query:   10 RKFFVGGNWKCNGSVSKVDELVGVLNASNITSTTEVVVAPPSVYLHGVSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGLTMDVVIGQLKAYAATVK--DWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTH-DGEHLIVDGTKIKVFGEMDPANIKWGDAGADYVVESTGAFTGIDTAGKHMSGGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDKAASYDDIKGAIKEASEGSMEGVLGYTEEQVVSSDFLSNPYSSVFDAGAGIALSDDFVKVVSWYDNEMGYSTRVVDLIGH 1743
            RKFFVGGNWKCNGSV +  ELV +LN S++++ TEVVV P  V+LH V  KLR D+ V AQD WT G GA+TGETSADMLKD+GV W ++GHSERR KGE+NEE A KA YA + GLSV+ C GE  E RE+G T D V  Q+KAYA      DW K VIAYEP+WAIGTGLTA+PEQAQE H  +R+++A    A VA++VRI+YGGS NA +AP L +KPDIDGFLVGGASLKPEFV+I+N ++  K++ PV++GINGFGRIGRLV+RA+  +PMVN+V++NDPFI T YMEYMF +DT HG Y G V+  D +H+ +DG  I+VFGE DP+NI WG AGADYVVESTG FT  + A  H+ GGA KVVISAPS DAPMFVMGVN E Y P M VVSNASCTTNCLAP+AKV+NDTFGLKEGLMTTVHAVTATQ+TVDGPS+KDWRGGR A +NIIPSSTGAAKAVGKVIP LNGKLTGMSFRVPT +VSVVDLTCRL+K ASYDDI  AIKEASEG M+G+LGY  + VVSSDF+SN +SS+FD  AGIALS+DFVK+VSWYDNE GYS RV+DLI H
Sbjct:   29 RKFFVGGNWKCNGSVQQTAELVSMLNQSSVSTDTEVVVCPSQVHLHAVQTKLRSDIAVGAQDVWTQGAGAFTGETSADMLKDLGVSWTLVGHSERRGKGESNEETAKKAKYALDKGLSVIACCGEPLENRENGTTNDFVFPQIKAYADAFNKADWKKVVIAYEPIWAIGTGLTATPEQAQETHAAIRQYLATLAGADVANEVRILYGGSANAKTAPGLSAKPDIDGFLVGGASLKPEFVDIINCQNPVKTLKPVNIGINGFGRIGRLVMRAAQNDPMVNIVAVNDPFIPTNYMEYMFAFDTTHGPYSGSVSMVDDKHISIDGKPIRVFGERDPSNIDWGSAGADYVVESTGVFTTSEKASAHLKGGASKVVISAPSADAPMFVMGVNAESYDPSMNVVSNASCTTNCLAPLAKVVNDTFGLKEGLMTTVHAVTATQQTVDGPSQKDWRGGRAACYNIIPSSTGAAKAVGKVIPALNGKLTGMSFRVPTVNVSVVDLTCRLEKGASYDDICQAIKEASEGPMKGILGYQNKDVVSSDFISNTHSSIFDEKAGIALSNDFVKLVSWYDNEAGYSMRVLDLIKH 609          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16264.1 vs. uniprot
Match: A0A7S4UZG6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UZG6_9STRA)

HSP 1 Score: 816 bits (2107), Expect = 7.680e-292
Identity = 404/581 (69.54%), Postives = 471/581 (81.07%), Query Frame = 1
Query:   10 RKFFVGGNWKCNGSVSKVDELVGVLNASNITSTTEVVVAPPSVYLHGVSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGLTMDVVIGQLKAYAA--TVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLI-VDGTKIKVFGEMDPANIKWGDAGADYVVESTGAFTGIDTAGKHMSGGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDKAASYDDIKGAIKEASEGSMEGVLGYTEEQVVSSDFLSNPYSSVFDAGAGIALSDDFVKVVSWYDNEMGYSTRVVDLIGH 1743
            RKFFVGGNWKCNGSV +V++LV +LN S +++ TEVVV P  VY+ GV++K+RGD+ V AQDCW  GNGA+TGETSADMLKDMGVGW +IGHSERR KGE+NEE A KA YA + GL V+ C GE  E RE+G T + V  Q+KAYA   T +DW   VIAYEP+WAIGTGLTA+PEQAQ+ H  LR+++ E   A VA+  RI+YGGS    +AP L +KPDIDGFLVGGASLKPEF +IVN + G KS+ PV++GINGFGRIGRLV+RA+  +PMVN+V++NDPFI   YMEYM ++DTVHG +  EV + G++ I V G  I VFGEMDP+NI WG AGADYV+ESTG FT ID A  H +GGAKKVVISAPSGDAPMFVMGVN EKY   M +VSNASCTTNCLAP+AKVIND FGLKEGLMTTVHAVTATQ+TVDGPS+KDWRGGR A +NIIPSSTGAAKAVGKVIP LNGKLTGMSFRVPTA+VSVVDLT RLDK ASY+ I  A+KEASEGSM G+LGY  E +VSSDF+ +  SS+FD  AGIAL+DDFVK+VSWYDNE GYS RV+DLI H
Sbjct:   30 RKFFVGGNWKCNGSVQQVNDLVSMLNQSTLSTDTEVVVCPSQVYVQGVTEKIRGDIAVGAQDCWVQGNGAFTGETSADMLKDMGVGWAVIGHSERRGKGESNEEVAKKAKYALDKGLKVIACCGEPLEAREAGTTNEFVFPQIKAYADVFTKEDWANVVIAYEPIWAIGTGLTATPEQAQDTHADLRQYLGEIAGADVAEATRILYGGSATGATAPGLSAKPDIDGFLVGGASLKPEFADIVNCQGGEKSLKPVNIGINGFGRIGRLVMRAAQNDPMVNIVAVNDPFIPVNYMEYMLEFDTVHGRFPTEVKYTGDNEITVGGKPITVFGEMDPSNIAWGSAGADYVIESTGVFTSIDKASAHKAGGAKKVVISAPSGDAPMFVMGVNQEKYESSMDIVSNASCTTNCLAPLAKVINDEFGLKEGLMTTVHAVTATQQTVDGPSQKDWRGGRAACYNIIPSSTGAAKAVGKVIPSLNGKLTGMSFRVPTANVSVVDLTARLDKGASYETICAALKEASEGSMAGILGYQNEDIVSSDFIGDTRSSIFDEKAGIALTDDFVKLVSWYDNEAGYSNRVLDLITH 610          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16264.1 vs. uniprot
Match: G4Z863_PHYSP (Gp_dh_N domain-containing protein n=420 Tax=Eukaryota TaxID=2759 RepID=G4Z863_PHYSP)

HSP 1 Score: 815 bits (2105), Expect = 9.610e-292
Identity = 402/579 (69.43%), Postives = 473/579 (81.69%), Query Frame = 1
Query:   10 RKFFVGGNWKCNGSVSKVDELVGVLNASNITSTTEVVVAPPSVYLHGVSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGLTMDVVIGQLKAYAATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSKSVG-PVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVFGEMDPANIKWGDAGADYVVESTGAFTGIDTAGKHMSGGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDKAASYDDIKGAIKEASEGSMEGVLGYTEEQVVSSDFLSNPYSSVFDAGAGIALSDDFVKVVSWYDNEMGYSTRVVDLIGH 1743
            RKFFVGGNWKCNGS+ +  ELVG+LN + I +  EVVVAP  V+   V   LR DV+VS QD W  GNGA+TGETSA+MLKD+G  + ++GHSERR+KGETNE  A KAAYA E GL+V+ CIGE+KE RE+  T+  +  QL AYAA +KDW   VIAYEP+WAIGTGLTASP+QAQEVH  +R W+ E VS   A+K R+IYGGSV A +AP L  K DIDGFLVGGASLKP+F++I+NA++ + +VG  V+V INGFGRIGRLVLRA+ KNP++N+V+INDPFI TTYMEYM KYDTVHG + GE++HD +H+ VDG  I+VF EM+PANIKWG+    YVVESTGAFT  + A  H+  G +KVVISAPS DAPMFVMGVNHE Y  +M VVSNASCTTNCLAP+AKV++D FG+KEGLMTTVHAVTATQKTVDGPSKKDWRGGRGA FNIIPSSTGAAKAVGKVIP+LNGKLTGMSFRVPTADVSVVDLT RL   ASYD+IK AIK ASE  M+G+LGYTE  VVSSDF+ + +SS+FDA AGIAL++DFVK+VSWYDNE GYS+RV+DLI H
Sbjct:   19 RKFFVGGNWKCNGSLGQAQELVGMLNTAKIPANVEVVVAPSQVHAATVKAALRPDVRVSGQDVWKQGNGAFTGETSAEMLKDLGAEYTLVGHSERREKGETNEVVAKKAAYALEKGLAVIACIGETKELREANQTVAFITEQLDAYAAEIKDWTNVVIAYEPIWAIGTGLTASPDQAQEVHASIRAWLKEKVSPEAAEKTRVIYGGSVGAKNAPELSQKADIDGFLVGGASLKPDFLQIINAQNPTDNVGGAVNVAINGFGRIGRLVLRAAAKNPLINIVAINDPFISTTYMEYMLKYDTVHGRFGGEISHDEQHIFVDGKPIRVFNEMNPANIKWGEEQVQYVVESTGAFTTTEKASAHLQNGVEKVVISAPSSDAPMFVMGVNHELYEKNMHVVSNASCTTNCLAPLAKVVHDKFGIKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGACFNIIPSSTGAAKAVGKVIPDLNGKLTGMSFRVPTADVSVVDLTARLVNPASYDEIKAAIKSASENEMQGILGYTENAVVSSDFIGDSHSSIFDASAGIALTNDFVKLVSWYDNEWGYSSRVLDLIEH 597          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig80.16264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP79_ECTSI0.000e+098.46Triosephosphate isomerase/glyceraldehyde-3-phospha... [more]
A0A0A6YYW1_DICDH0.000e+085.74Mitochondrial triosephosphate isomerase/glyceralde... [more]
A0A0A6YYW3_SACLA0.000e+091.35Mitochondrial triosephosphate isomerase/glyceralde... [more]
A0A835ZGW0_9STRA4.160e-31674.87Triosephosphate isomerase/glyceraldehyde-3-phospha... [more]
A0A485KYA8_9STRA1.070e-29571.55Aste57867_13505 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6Y8Y2_9STRA8.110e-29469.71Gp_dh_N domain-containing protein n=1 Tax=Pythium ... [more]
K3WWT6_GLOUD5.130e-29369.71Gp_dh_N domain-containing protein n=1 Tax=Globispo... [more]
A0A1Z5JDH9_FISSO2.590e-29269.71Glyceraldehyde 3-phosphate dehydrogenase n=2 Tax=F... [more]
A0A7S4UZG6_9STRA7.680e-29269.54Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
G4Z863_PHYSP9.610e-29269.43Gp_dh_N domain-containing protein n=420 Tax=Eukary... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig80contigE-siliculosus-1a_M_contig80:429832..440955 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size1818
Model size1820
Exons16
Ec32 orthologEc-08_000500.1
Ec32 ortholog descriptiontriosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
EC1.2.1.12,5.3.1.1
EggNOG OGsCOG0057@1,COG0149@1,KOG0657@2759,KOG1643@2759
EggNOG free text desc.triosephosphate isomerase
KEGG ModuleM00001,M00002,M00003,M00165,M00166,M00308,M00552
KEGG Pathwayko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010
KEGG ReactionR01015,R01061
KEGG koko:K00134,ko:K01803
KEGG rclassRC00149,RC00423
Seed eggNOG ortholog2880.D7FP79
Seed ortholog evalue0.0
Seed ortholog score1151.0
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig80.16264.1prot_E-siliculosus-1a_M_contig80.16264.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig80 429832..440955 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936216.0313704-CDS-E-siliculosus-1a_M_contig80:429831..4299121622936216.0313704-CDS-E-siliculosus-1a_M_contig80:429831..429912Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 429832..429912 -
1696250980.641839-CDS-E-siliculosus-1a_M_contig80:429831..4299121696250980.641839-CDS-E-siliculosus-1a_M_contig80:429831..429912Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 429832..429912 -
1622936216.0461426-CDS-E-siliculosus-1a_M_contig80:430388..4304451622936216.0461426-CDS-E-siliculosus-1a_M_contig80:430388..430445Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 430389..430445 -
1696250980.6557934-CDS-E-siliculosus-1a_M_contig80:430388..4304451696250980.6557934-CDS-E-siliculosus-1a_M_contig80:430388..430445Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 430389..430445 -
1622936216.059063-CDS-E-siliculosus-1a_M_contig80:430887..4310221622936216.059063-CDS-E-siliculosus-1a_M_contig80:430887..431022Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 430888..431022 -
1696250980.6682153-CDS-E-siliculosus-1a_M_contig80:430887..4310221696250980.6682153-CDS-E-siliculosus-1a_M_contig80:430887..431022Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 430888..431022 -
1622936216.07744-CDS-E-siliculosus-1a_M_contig80:431396..4315541622936216.07744-CDS-E-siliculosus-1a_M_contig80:431396..431554Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 431397..431554 -
1696250980.6781654-CDS-E-siliculosus-1a_M_contig80:431396..4315541696250980.6781654-CDS-E-siliculosus-1a_M_contig80:431396..431554Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 431397..431554 -
1622936216.0931008-CDS-E-siliculosus-1a_M_contig80:431888..4320361622936216.0931008-CDS-E-siliculosus-1a_M_contig80:431888..432036Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 431889..432036 -
1696250980.6903365-CDS-E-siliculosus-1a_M_contig80:431888..4320361696250980.6903365-CDS-E-siliculosus-1a_M_contig80:431888..432036Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 431889..432036 -
1622936216.110635-CDS-E-siliculosus-1a_M_contig80:432256..4324021622936216.110635-CDS-E-siliculosus-1a_M_contig80:432256..432402Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 432257..432402 -
1696250980.700164-CDS-E-siliculosus-1a_M_contig80:432256..4324021696250980.700164-CDS-E-siliculosus-1a_M_contig80:432256..432402Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 432257..432402 -
1622936216.122473-CDS-E-siliculosus-1a_M_contig80:432940..4330551622936216.122473-CDS-E-siliculosus-1a_M_contig80:432940..433055Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 432941..433055 -
1696250980.7192087-CDS-E-siliculosus-1a_M_contig80:432940..4330551696250980.7192087-CDS-E-siliculosus-1a_M_contig80:432940..433055Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 432941..433055 -
1622936216.1352172-CDS-E-siliculosus-1a_M_contig80:433636..4337181622936216.1352172-CDS-E-siliculosus-1a_M_contig80:433636..433718Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 433637..433718 -
1696250980.7352595-CDS-E-siliculosus-1a_M_contig80:433636..4337181696250980.7352595-CDS-E-siliculosus-1a_M_contig80:433636..433718Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 433637..433718 -
1622936216.153982-CDS-E-siliculosus-1a_M_contig80:434793..4349391622936216.153982-CDS-E-siliculosus-1a_M_contig80:434793..434939Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 434794..434939 -
1696250980.7516878-CDS-E-siliculosus-1a_M_contig80:434793..4349391696250980.7516878-CDS-E-siliculosus-1a_M_contig80:434793..434939Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 434794..434939 -
1622936216.1698155-CDS-E-siliculosus-1a_M_contig80:435707..4358511622936216.1698155-CDS-E-siliculosus-1a_M_contig80:435707..435851Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 435708..435851 -
1696250980.7706718-CDS-E-siliculosus-1a_M_contig80:435707..4358511696250980.7706718-CDS-E-siliculosus-1a_M_contig80:435707..435851Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 435708..435851 -
1622936216.1904085-CDS-E-siliculosus-1a_M_contig80:436197..4362571622936216.1904085-CDS-E-siliculosus-1a_M_contig80:436197..436257Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 436198..436257 -
1696250980.7837386-CDS-E-siliculosus-1a_M_contig80:436197..4362571696250980.7837386-CDS-E-siliculosus-1a_M_contig80:436197..436257Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 436198..436257 -
1622936216.21139-CDS-E-siliculosus-1a_M_contig80:436932..4370711622936216.21139-CDS-E-siliculosus-1a_M_contig80:436932..437071Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 436933..437071 -
1696250980.7956471-CDS-E-siliculosus-1a_M_contig80:436932..4370711696250980.7956471-CDS-E-siliculosus-1a_M_contig80:436932..437071Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 436933..437071 -
1622936216.2275965-CDS-E-siliculosus-1a_M_contig80:437793..4378971622936216.2275965-CDS-E-siliculosus-1a_M_contig80:437793..437897Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 437794..437897 -
1696250980.80579-CDS-E-siliculosus-1a_M_contig80:437793..4378971696250980.80579-CDS-E-siliculosus-1a_M_contig80:437793..437897Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 437794..437897 -
1622936216.2420235-CDS-E-siliculosus-1a_M_contig80:438536..4386591622936216.2420235-CDS-E-siliculosus-1a_M_contig80:438536..438659Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 438537..438659 -
1696250980.813449-CDS-E-siliculosus-1a_M_contig80:438536..4386591696250980.813449-CDS-E-siliculosus-1a_M_contig80:438536..438659Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 438537..438659 -
1622936216.2603512-CDS-E-siliculosus-1a_M_contig80:440161..4402811622936216.2603512-CDS-E-siliculosus-1a_M_contig80:440161..440281Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 440162..440281 -
1696250980.821264-CDS-E-siliculosus-1a_M_contig80:440161..4402811696250980.821264-CDS-E-siliculosus-1a_M_contig80:440161..440281Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 440162..440281 -
1622936216.2761528-CDS-E-siliculosus-1a_M_contig80:440895..4409551622936216.2761528-CDS-E-siliculosus-1a_M_contig80:440895..440955Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 440896..440955 -
1696250980.8299413-CDS-E-siliculosus-1a_M_contig80:440895..4409551696250980.8299413-CDS-E-siliculosus-1a_M_contig80:440895..440955Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 440896..440955 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig80.16264.1

>prot_E-siliculosus-1a_M_contig80.16264.1 ID=prot_E-siliculosus-1a_M_contig80.16264.1|Name=mRNA_E-siliculosus-1a_M_contig80.16264.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=606bp
MSGRKFFVGGNWKCNGSVSKVDELVGVLNASNITSTTEVVVAPPSVYLHG
VSQKLRGDVKVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQ
KGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGLTMDVVIGQLKAYA
ATVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVA
DKVRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAKDGSK
SVGPVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKY
DTVHGVYDGEVTHDGEHLIVDGTKIKVFGEMDPANIKWGDAGADYVVEST
GAFTGIDTAGKHMSGGAKKVVISAPSGDAPMFVMGVNHEKYTPDMTVVSN
ASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGG
RGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRL
DKAASYDDIKGAIKEASEGSMEGVLGYTEEQVVSSDFLSNPYSSVFDAGA
GIALSDDFVKVVSWYDNEMGYSTRVVDLIGHGSAELRAAVGFSRVNRPLS
RYKFHT
back to top

mRNA from alignment at E-siliculosus-1a_M_contig80:429832..440955-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig80.16264.1 ID=mRNA_E-siliculosus-1a_M_contig80.16264.1|Name=mRNA_E-siliculosus-1a_M_contig80.16264.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=11124bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig80:429832..440955- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTCTGGCCGCAAGTTCTTCGTCGGCGGGAACTGGAAGTGCAACGGATC CGTCTCGAAGGTAGGGGGGGTGGAATACTCTTGCACGTCCCCACGGGAAG AGCAAAGCGTGCGCGCTCGCGTTGCCGCATGTCTCCGTTTTTCTTGGCGG TGTGTGCACCGCCCGCGGACGACAACAGCCGCTCGCCGATAGTGCACCGT TTCTTCCTCAGTAGTGCCATGCTTGTGCGACGCCGACTTCCTGGCTGCCA AACCAAGCCTCGAACATGTAGTGGGGAGAGAGAGAGAGAGAGCCTGCAGC CGGCCTCTGGCGTCTACTACCCCCGCGATGGCTGTGTGCCCGCTTGCATC AACCGCAGCCGCTGTCGTAAAGGAATTGCACGGAAAAACGGCACTTGCCA GCCCGGCGGCTCCCCGGCTGTTCGGCGTAAGGAGCGGTTCTTGGATATGA TCTGTATGAAGCACATGAGGCACACCGCGTGAAGTTTTCTTGCCAACACA CGACGTTCCGAGGATTTGTCGAAAAAGTCCACGTCGGACATGCGGGCGCT GCCGCTGTGCTGGTCGCACCCAGTTAGACCCACAGACCCTCTTGTTGCAA AGAAGCCCGCAACGACAATGACGTTTGTGTGGCGCGCACGTGTGCATGAC GTCGACGCTGTCACCAACTAACAGGTTGACGAGCTCGTGGGCGTGCTCAA CGCCTCCAACATCACTTCCACCACGGAGGTGGTTGTGGCGCCTCCCTCCG TCTACCTCCACGGCGTCTCTCAGAAGCTCCGCGGCGACGTCAAGGTATTG TACAGCAGTGCATAGGTTCGCGACGTTGTCTTGCCTGCCCGTTGGTTGTG TTTTTTTGGGCCGGCCGTGTGTGTGCCGCTTTTCCGTGTTTTCACGAACT TCTTGACGATCACGGAGGGCAATATTTATTTCGTGATGATGAGTGTGTCC ATGCACCATGACATCATCGTGCTGAGACGATAATACAAACATGGTAGAGA AGATACTCCGATTGACGTTCGTGTGCGTGTGCGTGTGCGTGTTGTCTGAG CGGCAAGCTCTAATAGCGTGATTTTGGTGCCTACGCCGCTACGTACGCAC GCGATCTGCAACTCCAATCCCGCGTAATCATGGTATGCCCGGTCGGTACC TCCCGAGAGGCGTATATATAGCCAGTGCACGAGAGCAAGTGGCGCGCATA GACGTCACTCGGGTGGTCTCAGTAGAAGTACGTGCGTTGTGGACGCATGT GCTGTCAGCGATATTGTGGGTGTAGCAAGTGCAGAGCCACAGTTACTCAC GGCGTGGTGTGTATGTCTCGGAAAGATAAGAGGGCGGGGGTGGGAGGGGT TGTGCCGTGCATTCTGCTGCATGATATAAGTACTTCAACTAAAACCGGAG GCGAGTTGTAAGCAAAATGGGCGTTTTGAATCTAGCTTTCACCTTTGATT CGTTACCCCAGCACGAGACGAAATTCGTGGGATTGTTCAATTACACAGCC GGTGCAACTTGCCAGGTTATCGACTACTTTTACGTGTAATACGGAGTAAT ACTTTCGAGCAAACCTTACGACGAGAGCAAAGCACATGCCTGAAACTCTT TCCCACCATCGCCCTGACGTTGGGCTGCTGTCCCGAATAGCTCTCACCCA CTCGTGACGAAATCACTTCAACACACGATGTAATGCATGCGGCCGACCCG CCCAGAGTCCCAACCAGGCAGCGCTGCCGGTTGAGGGCTCATTTTTTCGC ACTTTTTTCTTCTCAGGGGTTGCAGTTTTTTTAATGCCGTATGCTACATG TTCACCGTTGTTTTGTGCTTGTCTTCTTTCCGGCGAATCGTATCTGACTA TCTGACGTGTCCGATGTGGCGCCGAAATCCACTAGACCATTCGGCGCGAC TGGTCGCTGACTGGTCTAACGGCTTGATTTGAACGTTGTTTTTCCCTGGA GATCTTGGGTTCTCTTTGAGAGCACAACCGAAATCACACCATTAGACCAG TTTCAGTCGATTGGATCACTCAGTTAGCAGCCGCCTGCAGACAGACTGGT CTAATGGTTAGTGTTTCGTTGAAGGTAAAAAAAAGAACACAAGTTATCCC AGACTCTTGGATTTGTCGATAAAGCTGACACAAAAAGAAAACTCAAGACG CATGTTCATCTTCCTTCTGTTTCTCGTGTGCTGCAGCGCGAACGAAAGTT GACGCTGTTGTGCCGCGTGTTGACAACCGAACTGAATGCCCCAACCGTCC ATCTTCCGACCGCCACCATCTTTCCTTCCTGCAACGTCAACAACAGGTGT CCGCGCAAGACTGCTGGACCGGCGGCAACGGCGCCTACACGGGGGAGACC TCTGCCGACATGCTCAAGGACATGGGCGTCGGATGGTGCATCATCGGACA CTCGGAGCGAAGGCAGAAGGTACGGGGGGACTGCAGACAGGATGAAATCA ACACGGGGGTACCGTGCGCGGCTTTCGAAACAACAACTCAGTAGGAGGAG GAGCCCAGCGCCGTCTGAGGTTCCTGGAAATTCAAGCCGACACATGCCTG TAGATAGCACGCGAAACAGAAACAGCGGCGTGGCCTATGGGAGGTGTGTG GTAGACACGCCGGTATGTGTGCATATGCAGGTCATCTTCGCTAGTGAACC TAAATGGTCTTGGACTGGTGAATTCGATCGATACAGCGTAACTTGTTTGT TCTTGTGGTTTAAAGAAGCAAATCTCAGTAAAAAATACTAAAAACTTCAA CTCCGCCTCCCGTACGGCAGAGCGTGCTGGTGTCGGCTTTTTGCGTTATA GGCAATCTCCGTCTGCACGTTACAGTGTAGTACACGTCTCACCACGAAAA ATGGGGGGGCTGTCGCCGTAATGAATAGGGCGAACCCAGAAAAAAAAAAC GTTGGTTGGGCTAGGATAACGGCACTTTTCTCACCGCGTGCGCGTTTGTC CTTGCCCCTGCTGGTGGCGATGTCACGATACAACGCGATACTCTGCTCTG CTGCGGTGTGGTAACTGTATTAATACATGTAATACATGTATCATATGAAT ATGAATAGGGCGAGACGAACGAGGAGTGCGCCGTGAAGGCTGCCTACGCC CAGGAGCACGGCCTCTCCGTGATGGGGTGCATCGGCGAGAGCAAGGAGGA GAGGGAGTCGGGGTAAGAATAGTTTAATTATTCCATTCGTTTCTTTGTGT GTAATCGTCTTGTTTTTGTTATTTAACCGTATGTGGTGCATTTGTATGAA TGGGACAACGGTGGGCATTATTTGTTAAGTCGTGGAATCGTTTTATTTGT CCACGCCCAGTTTCGTGTAGAGAGTTACGGCACTAGTTTCCACGGTACCG AAGAGGCAGGTCCATCTTCCGACAACTCCTCTGGTATTTATTTACCCTTT TCCTCTTCAGTTCTCCACGTTTTAGCTGTTTTTTCTTCGCCGTCTTCTCC TGGAGTATGTTTGAAGCTGTTTTTTTTTTTTTTTTCATCTCCTTAACTAT GCTTCAACGAAAAAATACTCGACGATGTCCCCCTTTTCATTTTCAGGACA CGTGTTTGTTGCTTCTTCCTCACAGTCTCCTGTTGGAGTACGGTCGAAGC TGTGTTTTTATTTTCTCATTATGATACATCGCCTTGATCTCTATCCTAAA GAAAAGAGTATTCAGATAGATTGACAACGAATTCAAGGCGTCAGCGGAAA GTACCGATTTTTGTTTTGTCGTTTCTTCGTACCCGTGCCTTAGCGAAAAA ACTCTTCGATGGTCGCCCTTTTCCTGTTCGGGACATGTTTATTTCCGCAC CATCTCTTGTTGAGCATGATTGACTGTGATTAATTTTTTCATTCTTTTTT ATTCTTTCTCGTGCCCGTGCTCTGCCGAAACAAGGTTGACGATGGACGTG GTGATCGGGCAGCTGAAGGCGTACGCCGCCACGGTGAAGGACTGGGACAA GTTCGTCATCGCCTACGAGCCCGTCTGGGCCATCGGCACCGGCCTCACCG CCTCGCCCGAGCAGGCTCAGGAGGTACGTGCGTACGTGTGCTGCGCAACC GCCTTGGTTGTTGCTACTGTATTTGTTGGAACCGCGCCTTCGCGAGAAAT TGTGGTTATGCGGATATAGAAGAGAGAAGGGGTACGCAGGCCTCATCTAC ATGCCCGACCCTTAACCTAAACCCATCTTCTCTCACTGCGTGCTTTGTCC GACATGTTAACTTGGTAGAAAATCCTTGCAAAGGCTGCTGATTTGTTGGG TGTGTTAGGACCACTCGCTCGGGAGATGCACGGCGCGTTGTTGTTCCTGC TGTTGGATTGATGTTTGCTGATTTGATTGTACAAGGTGCCCGTGATGTTT TGATACCGCGTACGGCTGATATGTACGTACGTAATGGCATGGCTGCTGCC GTCGGAAATGTGCTCGTGTTTGCTTGGGTCATGGTTACACGCGATTCCGT TGTTTTCTCTATAACGGGAGTCCTTGCTACTGTCCATCCATGATATGTCC TGTGCCTTAAATACGACATGTACTTGAGCCTTGAAAAGCAACGAGAACGA GTTGGTCCTTTTCTTTCTGTCTCACGTTTGTGTTGGATGCAGGTGGCCTT GTTTTTGTGCAGAGATTTGTTTCTCGATTCGATGCATGTTGCTTCGTTTC TGCCGTTTTTGTAAACATTTTTTTGTGGTATTTTTTTGTTGTTGTCAGGT GCACGAGGGGCTCCGCAAGTGGGTCGCCGAGAACGTCTCCGCCTCTGTGG CTGACAAGGTCAGTCGTTTGTTCAGTTCTACTTCATTTTGGCATGGTTAC TACGTGTGCTAGATTTTTTTTCAGTACTTGATTTTCGCATGCAATATATG TAGCATAGATGCCACGAACATTAAGCATGTATTGTATCTATTGTATCTGC CAGATCTGTTGTTCGCACGACACATCGTTCCAGCCTTTCCTGTGTCGGCA CTCAGTAGAACCGTTTAGTTTAGCATATGCCGCAGTGGAGCCTTTTTTTC GCGCCCTGTGCTCCTGCTGTTGATCTCGACACCCTGAACTACGTCTATTG TTCCGCGCTCCTGTGGCGTGCTTACGTTCGTTCGTTCGTTCGTCCGTGGA GCAGGTGCGCATCATCTACGGCGGCAGCGTGAACGCTGGATCCGCACCCA CCCTCGGGTCCAAGCCCGACATCGACGGCTTCCTCGTCGGCGGCGCTAGC CTCAAGCCTGAGTTCGTGGAGATCGTGAACGCTAAGGACGGCTCTAAGGT GTGTGGGGTTGGGAGTTACTCTTCAGGGTTACAGGGATTGTACTAGAACG TTGGGAGATAAGGGTTACAGGGATTGTACTAGAACGTTGGGAGATAAGGG TTACAGAGATGATCGACGTTAAGGCTAAGGAAGGCTCCAGGGTGTGTGGG GTTGGGAGTCGTAGGAGGAAGGGAGGTGCAGGGGTTAAGATATCGTCAGC GCTAAGGACGTCTTCAAACTTGCGAGATTGGGAGTTGTATGGATCGAGAT TGTCAACACTAAGGATGGATGGGTTCAAAGTGTGAGAGGGGTGGGAGTTG CAGTTTAAGGTGGCGTTTGGACTATGGTTATGTAACCATTAGGCGCGCCG ACGGGACGCATAACGGCAGTGACGAGAGCATACATGTGTGGGTTGCAGGG CAGGCCGATGTTCCACGAGCGACGATTGTTGTGTCACCGTATGTCGTGCG ACGCTTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGGTGTATATCTTGTAC GACCGGTGCAAAACAGTCAGTAGAGTCTGATGGTATCGGTCCTAGTCTCT GATACATGAGTTTGATGTACCTCCACGCCCCTGATCCAGACTGTTGTCGC TCTCCCCCATCACCCACGCTGAGCCCTGCTGTTTCCTAAACCCCACTCCT TGTGGCGATAGATATTCCCCGTTTGAGTCAGTCTTCTTGCAGCGTGTCGC AAACCCCCGCCTGACTCTTTCTCTTTGTTGTTTTGTCGTTGTGTCATGTG GTCGATCGTATTACAGTCGGTGGGCCCAGTGTCCGTCGGCATCAACGGGT TCGGCCGCATCGGCCGTCTGGTCCTGCGCGCCTCCCTCAAGAACCCCATG GTGAACGTCGTTTCCATCAACGATCCCTTCATCGACACCACCTACATGGA GTACATGTTCAAGTGAGTTTCGGCCGGCGGTTGGTTGCACGCAAGGTGGT GGTGTTGGTTGCCGAGAGAGAGAGACAGAGTATATCGTGGCGGTTGAATA AGCGGGTGGCGCAACGTCCGTTGTTTGCCACACAGATCTGCTTCGAGCAT GAGAGACGTGTAGTGTTGTGTTTTTTTTGTGTGTGTGCGTTTTTTTAGGG GGGGGGGGGGCAAGTTGAGCATCTTCCTCTGCGGACTGTGTTTGTACAGC GGCTCAGTTATCCGTATCGTCACCCGGGAATGTAAAGCTATGGCTGGGTT TCGTCAATCAACGATTGACCATTTCCCGAAACGTGTGTTGCGTTACTGTC ATTTTTAGAGGTGTACTCAGCACTAGATACGGATCTACGGAGATGTGGTG TGTGCAACGAAGGGCAATCCCCCTTGTGTGGGCCATGGTGCTGTCTTGGC CAGCTAGTACCCAAGGTCTTGAATCAGCCTTTCTCCGCGTTCCCGACGAT ACGCACCCATTGCACGTGACGATGAAGTGCGTGCTTATCTTCTGGGATCT CGACCACGGCTGATTCAAGGCCTAGGTTATTAAAGGGCGAAGAGGGCACG AGTGTTGTAGGGGGTTTCGTGCATCGTTTGGGTATAAGCTCTTGATCGGC GACCCTCCTTTTGCCGTGCGCCGGCGAAAGGAGGGTCGCCTATCAAGAGG TTGTACCCAAACGATGCACGAAGCCCCCACGGTGCATCTCCGCAGATCCT TATCTAGAGCTGAGTACGTCTAACAGTTTCCACTTTCCAATGAGGGACTA GCTGTTGTCTGTCGAAGAAGCAAGATGGAAACCGACACTGATGATTTACC TTTTTTTTGTTGTGTTGTGGCCGCGCTCTTGGGTATAGAAAGGTACGATT GTTGAGTAAAAATGTTCCATCCAAGCAGGAGGGACCGTCGAATGAGAATG ATGCTGCATAATGGAAAACAAGAACGATCGGTGCTGACAAGATAAGCAAA ATGACGAGGGTCAATCCATGATGAAATCAAACCTTTCCGTTCGCTGTTTT GTGTTGTCGGCTGGGCGCACTCTTTGGGTAAAAATAGGTACGACACCGTG CACGGCGTGTACGACGGGGAGGTGACGCACGACGGGGAGCACCTTATCGT CGACGGCACCAAGATCAAGGTACGGTGTCAAAAACATGACTGCAGAACAA ACACTGGTAGCGCTCCGCGAATGCTGTTGTATGCATATGGGTTTATTGCT AATTTATCCTGGACTATCATCTGTGAAAAGATGGATTCGCGGTCCATTCC TACTCCGTCTTTAATTTGTCGTGGACTCTCTCCCATGGATAGAGTTGGAA TTGCTGTATCAGATTGAGAACAATAAAAAATGGCCTGTGTACGATTGAAT GCCGGGGCAAGTAAGCTGAGGCGTAGTCGTGCCGCATGTGTATCGCATTT AATGGTGCACACGGACCGTTGGGCGCCAAAACTGTGGAGACGGGGTCGAT CTGTGTGTTGTCTGACATCGCACACGGTAGCCGTCTGGCGGTCTCTGGTG CGGTCTTGAAACCACCGTCAAAAAGATTCATGTCGAACGCCGACAGAGAT AACCGAGACAATTGTTGACTTCTATAATAGCGTCTAGCGTACAGCAACAT TCCATATCTGCTCATAATGTACTGTGCAGTTTAGCAGCAGTACATCAACG CTCACCATGTAACTGTTACCGAAACCGAACCGGTACAAACGAATAACAAG GTGTTCGGCGAGATGGACCCCGCTAACATCAAGTGGGGCGACGCGGGCGC GGACTACGTCGTGGAGTCCACTGGCGCCTTCACCGGCATCGACACCGCCG GAAAGCACATGTCGGGTGAGAGAAGCCGCGCCGAGCGCAGGGGGCAAGCA TTAGTTGCCCGGTGCTCGTCTCATCCTATAGTCGGGTGCCCTCTATCATG CAGTCAGACGCCCTATGTAGCGTAGCGGTACGTCATGTGCCAGTCGCTGC TTTCAACCGCCCTAGCGGGTGGGTACCCGTACCATCCAATGTATTTAGTC ACCTCGATTATTCCATCTGTGCCAGCCAATTTCACCCGCACTTGGAGAGG GCACCACACCGTTTTTTGCTGCTTATGTCTTGCGAAGTTGGAACCGCTTT CTTGGTTTTCACGGTATGGTGTATCCAATCGCAGGTTACGACCTGTTCCA TCGGGATTTGTGATTTGCGAACAAGCAGGTAAGTCCGCTGCTGTGATGAG TTTTCGTTGTTTGCTTTTCTGCATTATATCGACTGATCCAGCCAGCGAGT CAGTGCTCGTTAGTACCAATCCGATCCGATCGGCCCTTGATGTCGACCTT GTCAAATCTTGTTCATTTTGTGGTGGGGCCCCGCGGATGGTACTGTAATT CAGGCGGCGCGAAGAAGGTGGTCATCTCGGCACCCTCGGGCGACGCCCCG ATGTTCGTGATGGGCGTCAACCACGAGAAGTACACCCCGGACATGACCGT CGTGTCCAACGCCTCGTGCACCACCAACTGTCTCGCTCCCGTGGCCAAGG TAAGGTTTGGCCAGTACCTTTCGTAGTCGTGGTTTGGTGGTTGCTCATGT TCCTGCTGTGTTGCTTGTCGCCAAAACGCCTCCCCCGCAACCGTTGCATC TTGTTTTTTTTCTCGTGCAGCCGTTTTTGTGTTCTGTTTTCTGTTTGTCA TGCCTCGGTTTGTTGACCGCACACCCTCATCGCCCATCGCGTCATGCTTG TTTTCTCTCTGGCGTTCAGGTGATCAACGACACCTTCGGCCTGAAGGAGG GTCTCATGACCACGGTGCACGCCGTAACCGCCACCCAGAAGACCGTCGAC GGCCCGTCCAAGAAGGACTGGCGCGGCGGCCGCGGTGCTGGGTTCAACAT CATCCCTTCTTCCACCGGTAAGGCCGCCTAGCCCTGCCTAGTCCTCCATA TGCTTGTTGTCCATGTATGATAACAGTCACGTAGTGCTAGGCCGCATGTT TGTTGCTCGTGTTTGATCTGATGTGGCATAATAACCATAGGTTATTCTTG GTGTGTCACGGTGTTGCAAGCCTTTGTCCAAGATAACATCTGGGTGCGAA CATCTCCCAGGAAAACACCAACTTACCTGGCTAGATTCTGTTCCATTCCG TGCCCACACAAACAGTGGACCAATGGTTGCTCAGAAGCAGCAGCCAAATG TTTCGAGCTTATAATGGATTACAAACAATGCCCGCCGCCGCTCAACAACA GGTGCCGCCAAGGCTGTCGGCAAGGTCATCCCCGAGCTTAACGGTAAGCT GACCGGTATGAGCTTCCGAGTACCCACCGCCGACGTGTCGGTCGTCGACC TTACGTGCCGCCTGGACAAGGCCGCGAGCTACGACGACATCAAGGGCGCC ATCAAGGAGGTAATCTTGACTGAACATAACAACGCGATTTAACCGGGGAA ATGTGGGACGGGAACGTGGTTTTGCCATCCGAGAGGTGGAGAATGCACAT ATCGCGTGGGAAAAACTGGGAAGAAAACCGGGCAAGGGGGTCATTTCAGT TTCAGAAAAAGGTTTGGCATGTATGGGAGGAACGGTGATTGGGCAGGAAG GAGGGCATGGTGGAGGAGAAGCGCCCACCGCTGTATGGTAGTCTGGGCGT CTCCTTGTTGAAGATGGGCCAGGTGAAATGACTGCTGTTGTTGGAGCATA TGAGTTGCTCTTTTAACGAATATAGTTGTTGAAGATGTGCCTCCATTTCT TTTACTTTATTTTTTCACGCGACGCTTGCACAGGCATCCGAGGGTTCGAT GGAGGGTGTGCTGGGCTACACGGAAGAGCAGGTGGTGTCGTCGGACTTCC TGTCCAACCCCTACAGCTCCGTCTTCGACGCTGGCGCGGGAATCGCTCTC AGCGACGACTTCGTCAAGGTGCGTTGTTCTTTTTCGCCTTACAACACGGT ATTCCGTACTCCCTCAATATTGTGTATCCCTCCCTCATGTTTTGACTTCG TCAAGGTGCGTGGTTCTTTCTCGCCTTGTACGTATTCCATATTTCCACCA ATATTCCAAGTTCCTTACCCGTTCTCTCTCGTCGACATGCGTGATTCTTT CTCGCCGTATGCGTTACGTGTTCCCTCATGGTTTCTCTCTCGTCATTCCG CGTGTTTCCTGTGGCAGTCATGACCCGTTCATCTCTTGCGGGCGGTAGTC GGAATGCCACGTACCATACAGCATGCAGGGGGGGTATTAAGGCGCTGAAC TTGTCTCCAGTAAAACATGTGTGAGAACGTTGCGTGCGTTCTTTCCCCCT CTCACTGGAAATGTGTCTTGCTTGTTTTCCGGTTTCGTCCCGTCCCATCC CATCCCGCAGGTGGTTTCGTGGTACGACAACGAAATGGGTTACTCCACCC GCGTGGTAGATTTGATCGCTCACATGGCCAAGGAGGACTCGTAAGCTTTC CTCAGGGAGTGAAGGAAACCGAGGCGTCTTTTCACCATCATGCCCCTTTA TGTAGTCGATTTCACGACTGGGGGGGAGTAGTGCACTGAGACGACCGACT GCCGTAGGGGGACAGGAGCAAACCATGATGCGTGTGAGCGCAAGTCGTGG GAGGCATGTTGGTTGTTTTCGGCCGTTTCTTGTTGCAGACCACCATGTCC GCCGGCGGTCCTTCGGCGAGGTCCGTTTTTTTTGTATGCTTTTTTGTCGG TGCCATGCGCAGCTCGCTGTAGGGCGCATTGGTTGTCTACAGCAGAGGTT GGGAATTTTGTTGTTGGGAGGGAGGAGGGAGGGGGGCGGGGGGTTGCTGT CCTACATGCTTGTCCGTTCTAAATGATGAGCCTGGGTGGCGTTGGCGATA GAATTTGGCGATACATTTTTAGAGCTCAACAGGGGCGAATGAGGGGCATG GTTCGGCCGAGCTCCGCGCTGCAGTGGGATTTTCTAGGGTAAATCGCCCG TTGTCTAGATACAAGTTTCATACA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig80:429832..440955-

>mRNA_E-siliculosus-1a_M_contig80.16264.1 ID=mRNA_E-siliculosus-1a_M_contig80.16264.1|Name=mRNA_E-siliculosus-1a_M_contig80.16264.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3636bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig80:429832..440955- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTCTGGCCGCAAGTTCTTCGTCGGCGGGAACTGGAAGTGCAACGGATC
CGTCTCGAAGATGTCTGGCCGCAAGTTCTTCGTCGGCGGGAACTGGAAGT
GCAACGGATCCGTCTCGAAGGTTGACGAGCTCGTGGGCGTGCTCAACGCC
TCCAACATCACTTCCACCACGGAGGTGGTTGTGGCGCCTCCCTCCGTCTA
CCTCCACGGCGTCTCTCAGAAGCTCCGCGGCGACGTCAAGGTTGACGAGC
TCGTGGGCGTGCTCAACGCCTCCAACATCACTTCCACCACGGAGGTGGTT
GTGGCGCCTCCCTCCGTCTACCTCCACGGCGTCTCTCAGAAGCTCCGCGG
CGACGTCAAGGTGTCCGCGCAAGACTGCTGGACCGGCGGCAACGGCGCCT
ACACGGGGGAGACCTCTGCCGACATGCTCAAGGACATGGGCGTCGGATGG
TGCATCATCGGACACTCGGAGCGAAGGCAGAAGGTGTCCGCGCAAGACTG
CTGGACCGGCGGCAACGGCGCCTACACGGGGGAGACCTCTGCCGACATGC
TCAAGGACATGGGCGTCGGATGGTGCATCATCGGACACTCGGAGCGAAGG
CAGAAGGGCGAGACGAACGAGGAGTGCGCCGTGAAGGCTGCCTACGCCCA
GGAGCACGGCCTCTCCGTGATGGGGTGCATCGGCGAGAGCAAGGAGGAGA
GGGAGTCGGGGGCGAGACGAACGAGGAGTGCGCCGTGAAGGCTGCCTACG
CCCAGGAGCACGGCCTCTCCGTGATGGGGTGCATCGGCGAGAGCAAGGAG
GAGAGGGAGTCGGGGTTGACGATGGACGTGGTGATCGGGCAGCTGAAGGC
GTACGCCGCCACGGTGAAGGACTGGGACAAGTTCGTCATCGCCTACGAGC
CCGTCTGGGCCATCGGCACCGGCCTCACCGCCTCGCCCGAGCAGGCTCAG
GAGGTTGACGATGGACGTGGTGATCGGGCAGCTGAAGGCGTACGCCGCCA
CGGTGAAGGACTGGGACAAGTTCGTCATCGCCTACGAGCCCGTCTGGGCC
ATCGGCACCGGCCTCACCGCCTCGCCCGAGCAGGCTCAGGAGGTGCACGA
GGGGCTCCGCAAGTGGGTCGCCGAGAACGTCTCCGCCTCTGTGGCTGACA
AGGTGCACGAGGGGCTCCGCAAGTGGGTCGCCGAGAACGTCTCCGCCTCT
GTGGCTGACAAGGTGCGCATCATCTACGGCGGCAGCGTGAACGCTGGATC
CGCACCCACCCTCGGGTCCAAGCCCGACATCGACGGCTTCCTCGTCGGCG
GCGCTAGCCTCAAGCCTGAGTTCGTGGAGATCGTGAACGCTAAGGACGGC
TCTAAGGTGCGCATCATCTACGGCGGCAGCGTGAACGCTGGATCCGCACC
CACCCTCGGGTCCAAGCCCGACATCGACGGCTTCCTCGTCGGCGGCGCTA
GCCTCAAGCCTGAGTTCGTGGAGATCGTGAACGCTAAGGACGGCTCTAAG
TCGGTGGGCCCAGTGTCCGTCGGCATCAACGGGTTCGGCCGCATCGGCCG
TCTGGTCCTGCGCGCCTCCCTCAAGAACCCCATGGTGAACGTCGTTTCCA
TCAACGATCCCTTCATCGACACCACCTACATGGAGTACATGTTCAATCGG
TGGGCCCAGTGTCCGTCGGCATCAACGGGTTCGGCCGCATCGGCCGTCTG
GTCCTGCGCGCCTCCCTCAAGAACCCCATGGTGAACGTCGTTTCCATCAA
CGATCCCTTCATCGACACCACCTACATGGAGTACATGTTCAAGTACGACA
CCGTGCACGGCGTGTACGACGGGGAGGTGACGCACGACGGGGAGCACCTT
ATCGTCGACGGCACCAAGATCAAGGTACGACACCGTGCACGGCGTGTACG
ACGGGGAGGTGACGCACGACGGGGAGCACCTTATCGTCGACGGCACCAAG
ATCAAGGTGTTCGGCGAGATGGACCCCGCTAACATCAAGTGGGGCGACGC
GGGCGCGGACTACGTCGTGGAGTCCACTGGCGCCTTCACCGGCATCGACA
CCGCCGGAAAGCACATGTCGGGTGTTCGGCGAGATGGACCCCGCTAACAT
CAAGTGGGGCGACGCGGGCGCGGACTACGTCGTGGAGTCCACTGGCGCCT
TCACCGGCATCGACACCGCCGGAAAGCACATGTCGGGCGGCGCGAAGAAG
GTGGTCATCTCGGCACCCTCGGGCGACGCCCCGATGTTCGTGATGGGCGT
CAACCACGAGAAGTACACCCCGGACATGACCGTCGTGTCCAACGCCTCGT
GCACCACCAACTGTCTCGCTCCCGTGGCCAAGGCGGCGCGAAGAAGGTGG
TCATCTCGGCACCCTCGGGCGACGCCCCGATGTTCGTGATGGGCGTCAAC
CACGAGAAGTACACCCCGGACATGACCGTCGTGTCCAACGCCTCGTGCAC
CACCAACTGTCTCGCTCCCGTGGCCAAGGTGATCAACGACACCTTCGGCC
TGAAGGAGGGTCTCATGACCACGGTGCACGCCGTAACCGCCACCCAGAAG
ACCGTCGACGGCCCGTCCAAGAAGGACTGGCGCGGCGGCCGCGGTGCTGG
GTTCAACATCATCCCTTCTTCCACCGGTGATCAACGACACCTTCGGCCTG
AAGGAGGGTCTCATGACCACGGTGCACGCCGTAACCGCCACCCAGAAGAC
CGTCGACGGCCCGTCCAAGAAGGACTGGCGCGGCGGCCGCGGTGCTGGGT
TCAACATCATCCCTTCTTCCACCGGTGCCGCCAAGGCTGTCGGCAAGGTC
ATCCCCGAGCTTAACGGTAAGCTGACCGGTATGAGCTTCCGAGTACCCAC
CGCCGACGTGTCGGTCGTCGACCTTACGTGCCGCCTGGACAAGGCCGCGA
GCTACGACGACATCAAGGGCGCCATCAAGGAGGTGCCGCCAAGGCTGTCG
GCAAGGTCATCCCCGAGCTTAACGGTAAGCTGACCGGTATGAGCTTCCGA
GTACCCACCGCCGACGTGTCGGTCGTCGACCTTACGTGCCGCCTGGACAA
GGCCGCGAGCTACGACGACATCAAGGGCGCCATCAAGGAGGCATCCGAGG
GTTCGATGGAGGGTGTGCTGGGCTACACGGAAGAGCAGGTGGTGTCGTCG
GACTTCCTGTCCAACCCCTACAGCTCCGTCTTCGACGCTGGCGCGGGAAT
CGCTCTCAGCGACGACTTCGTCAAGGCATCCGAGGGTTCGATGGAGGGTG
TGCTGGGCTACACGGAAGAGCAGGTGGTGTCGTCGGACTTCCTGTCCAAC
CCCTACAGCTCCGTCTTCGACGCTGGCGCGGGAATCGCTCTCAGCGACGA
CTTCGTCAAGGTGGTTTCGTGGTACGACAACGAAATGGGTTACTCCACCC
GCGTGGTAGATTTGATCGTGGTTTCGTGGTACGACAACGAAATGGGTTAC
TCCACCCGCGTGGTAGATTTGATCGGGCATGGTTCGGCCGAGCTCCGCGC
TGCAGTGGGATTTTCTAGGGTAAATCGCCCGTTGTCTAGATACAAGTTTC
ATACAGGGCATGGTTCGGCCGAGCTCCGCGCTGCAGTGGGATTTTCTAGG
GTAAATCGCCCGTTGTCTAGATACAAGTTTCATACA
back to top