mRNA_E-siliculosus-1a_M_contig8.16217.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16217.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI) HSP 1 Score: 1091 bits (2821), Expect = 0.000e+0 Identity = 539/589 (91.51%), Postives = 558/589 (94.74%), Query Frame = 2
Query: 1427 LWHTLGQDQAGSMAARPGTLPVDLARLLDMLDGLSTWPLAQNPCEHPPEAIVAGGLQAVRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCLTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVIRARRTVAGDVERESRRWLKSWIEKAHGHQPHGLSLEDGVSLVTCAQSGLGVSAPAFGGETGWPCDKSTPGLFHRMIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWQAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRATNIASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRCEEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCRLGVPYPFWRYGALIVGHSVEEGLFSLSLDYSEDDNMLKVEVLGGGDKVHAWAALSKVLSVMIKMLSEFPGFRASRSFF 3193
LWHTLGQDQ GSMAARPGTLPVDLARLLD+ DGL + L++NP EHPPEAIVAGG+QAVRGYYEAMF GGTTAVTRPLKVVI+GKETVGKTSLRRSITTGGPC+TQ+GGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVP+ANVILVGNKWDRV+R R TVA DVE ESRRWLKSW+EKAHGHQPHGLSLEDGVSLV+CAQS LGVSAPAFGG TGWPCDKSTPGLFHRMIY+PV DKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKW AKVAELNGAGTPVAAPEAAM GAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIR TN+ASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDT PPEYSIR EEANQARKYDLTL+VACSFSLGLPPGFVERLLARCC LG PYPFWRYGALIVG+ E+GLFSLSLDYSE DNMLKVEVLGGG++VHAWAALSKVLSVMIKMLSEFPG FF
Sbjct: 372 LWHTLGQDQTGSMAARPGTLPVDLARLLDVFDGLRSLDLSRNPWEHPPEAIVAGGVQAVRGYYEAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPNANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYSIRREEANQARKYDLTLSVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEKGLFSLSLDYSEHDNMLKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFF 960
BLAST of mRNA_E-siliculosus-1a_M_contig8.16217.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI) HSP 1 Score: 1064 bits (2751), Expect = 0.000e+0 Identity = 522/593 (88.03%), Postives = 552/593 (93.09%), Query Frame = 2
Query: 1415 ELTGLWHTLGQDQAGSMAARPGTLPVDLARLLDMLDGLSTWPLAQNPCEHPPEAIVAGGLQAVRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCLTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVIRARRTVAGDVERESRRWLKSWIEKAHGHQPHGLSLEDGVSLVTCAQSGLGVSAPAFGGETGWPCDKSTPGLFHRMIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWQAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRATNIASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRCEEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCRLGVPYPFWRYGALIVGHSVEEGLFSLSLDYSEDDNMLKVEVLGGGDKVHAWAALSKVLSVMIKMLSEFPGFRASRSFF 3193
+ + LWHTLGQDQ GSMAARPGTLPVDLARLLD DGL T L++NP EHPPEAIVAGG+QAVRGYY+AMF GGTTAVTRPLKVVI+GKETVGKTSLRRSITTGGPC+TQ+GGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRV+R R TVA DVE ESRRWLKSW+EKAHGHQPHGLSLEDGVSLV+CAQSGLGVSAPAFGG TGWPCDKSTPGLFHRMIY+PV DKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKW AKVAELNGAGTPVAAPEAAM GAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIR TN+ASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDT PPEY I+ E+ ++A + DL LTVACSFSLGLPPGFVERLLARCC +G P+PFWRYGALIVG+ E+GLFSLS++YSE+D +L +EV GG ++VHAWAALSKVLSVMIKMLSEFPG FF
Sbjct: 461 QFSRLWHTLGQDQTGSMAARPGTLPVDLARLLDRFDGLVTLDLSRNPWEHPPEAIVAGGVQAVRGYYDAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYGIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHMGYPFPFWRYGALIVGNGAEKGLFSLSVEYSEEDKILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFF 1053
BLAST of mRNA_E-siliculosus-1a_M_contig8.16217.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI) HSP 1 Score: 911 bits (2355), Expect = 5.530e-312 Identity = 457/590 (77.46%), Postives = 503/590 (85.25%), Query Frame = 2
Query: 1427 LWHTLGQDQAGSMAARPGTLPVDLARLLDMLDGLSTWPLAQNPCEHPPEAIVAGGLQAVRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCLTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVIRARRT-VAGDVERESRRWLKSWIEKAHGHQPHGLSLEDGVSLVTCAQSGLGVSAPAFGGETGWPCDKSTPGLFHRMIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWQAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRATNIASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRCEEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCRLGVPYPFWRYGALIVGHSVEEGLFSLSLDYSEDDNMLKVEVLGGGDKVHAWAALSKVLSVMIKMLSEFPGFRASRSFF 3193
LWH LGQD+ GSMAA PGTLPV LA LLD L+ + +AQNP E PP+AIV GG+ AVR Y+EA++MGGTTAVTRPLKVVIVGKETVGKTSLRRSI TG PC+T+ GG ESTVHVDVEDH +DGHPIR+FDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEM+GLNLEDLAIAPWLR+LTFRVPDA+VILVGNK DRV+R RRT VA DVE ESR+WL+SWIE A GHQP G+SLEDGVSLV+CA SG+G AP+FG +GWPCDKSTPGLFHR+IY+ D R VTM LP SYRLALEMLEELAS SR K EQ+TRGITRA LEEKWQAKVAE+N AGT VAAP+AAM+GAILIRKWEGGLVEYG+YVFLDVEWFATVLDPLF H+RDSYG IDLGGIR ++ SL RLD EHV EPQLAE+LW P LAPHLLLALKSAGLTFPL ND NGGLVILLRMDTKPPP+Y I+ +E +QA K+DL L V CSF LGLPPGFVERLLARCC LG+PYPFWRYGALIVG EE +FSLSL+YSE +L VEV GG +V AWAALSKVLSV IKML EFPG +FF
Sbjct: 300 LWHALGQDETGSMAAGPGTLPVPLACLLDSLERIYRLSVAQNPWESPPDAIVVGGIPAVRAYFEAIYMGGTTAVTRPLKVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEESTVHVDVEDHDLDGHPIRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLNLEDLAIAPWLRHLTFRVPDASVILVGNKCDRVVRTRRTAVAVDVEHESRQWLESWIEIARGHQPRGISLEDGVSLVSCAASGVGAVAPSFGRRSGWPCDKSTPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLEELASCSRSKTEQQTRGITRAILEEKWQAKVAEMNRAGTSVAAPDAAMAGAILIRKWEGGLVEYGSYVFLDVEWFATVLDPLFCHKRDSYGKIDLGGIRVMDVDSLDRLDEEHVLEPQLAEDLWGPVLAPHLLLALKSAGLTFPLSNDSNGGLVILLRMDTKPPPDYGIKLKEKDQANKFDLRLVVECSFRLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEERMFSLSLEYSEARKILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFF 889
BLAST of mRNA_E-siliculosus-1a_M_contig8.16217.1 vs. uniprot
Match: A0A6H5JSC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE) HSP 1 Score: 759 bits (1960), Expect = 1.450e-257 Identity = 392/574 (68.29%), Postives = 443/574 (77.18%), Query Frame = 2
Query: 1478 GTLPVDLARLLDMLDGLSTWPLAQNPCEHPPEAIVAGGLQAVRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCLTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVIRARRTV-AGDVERESRRWLKSWIEKAHGHQPHGLSLEDGVSLVTCAQSGLGVSAPAFGGETGWPCDKSTPGLFHRMIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWQAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRATNIASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFP-LPNDPNGGLVILLRMDTKPPPEYSIRCEEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCRLGVPYPFWRYGALIVGHSVEEGLFSLSLDYSEDDNMLKVEVLGGGDKVHAWAALSKVLSVMIKMLSEFPGFRASRSFF 3193
GTLPV L LLD L + LA NP E+PPEAI AGG+ AVR Y+EA+ G+ETVGKTS++ TG PC+T+ GVESTVHVDVEDH+VDGHPIR+FDCAGQVVYYGLLQLFLTPRAVY+LVWDAAKASEM+GLNLEDL IAPWLRYLTFRVPDA+VILVGNK D V+R RRTV A DVE ESR+WL+S IE A GHQP G+SLEDGVSLV+CA SG+GV AP+FG +GWP DK+TPGL+ R+ YN R VTMHLP SYRLAL+MLEELAS SR K EQ RG+TRA LE+KWQ KVAE+N GT V+AP+AAM+GAILIRKWEGGLVEY +YVFLDVEWFATVLDPLF H+RDSYG I LGG+R T++ L RLD +HV EPQLAEE W FP LPND NGGLVILLRMDTKP P+Y I+ +EA+QA K+DL L V CSFSLGLPPGFVERLLARCC LG+PYPFWRYGALIVG E +FSLSL+YSE+ +L VEV GG +V AWAALSKVLSV IKMLSEFPG +FF
Sbjct: 31 GTLPVPLVCLLDTLARVRDLGLAHNPWEYPPEAIAAGGIPAVRRYFEAIXXXXXXXXXXXXXXXXXGEETVGKTSIK----TGRPCMTRGCGVESTVHVDVEDHEVDGHPIRVFDCAGQVVYYGLLQLFLTPRAVYMLVWDAAKASEMEGLNLEDLGIAPWLRYLTFRVPDASVILVGNKCDHVVRTRRTVVAADVEHESRQWLESLIEIARGHQPRGISLEDGVSLVSCAASGVGVVAPSFGAGSGWPFDKNTPGLYRRIAYNSASRTRAVTMHLPESYRLALKMLEELASCSRSKTEQHIRGVTRAILEDKWQTKVAEMNRVGTSVSAPDAAMAGAILIRKWEGGLVEYSSYVFLDVEWFATVLDPLFCHKRDSYGKIYLGGMRVTDVDGLDRLDEDHVLEPQLAEEDWR-----------------FPSLPNDSNGGLVILLRMDTKPSPDYGIKLKEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEVRMFSLSLEYSEERKILTVEVSGGRTEVFAWAALSKVLSVTIKMLSEFPGLPCGTTFF 583
BLAST of mRNA_E-siliculosus-1a_M_contig8.16217.1 vs. uniprot
Match: A0A6H5JRW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE) HSP 1 Score: 754 bits (1946), Expect = 2.620e-254 Identity = 394/589 (66.89%), Postives = 435/589 (73.85%), Query Frame = 2
Query: 1463 MAARPGTLPVDLARLLDMLDGLST---WPLAQNPCEHPPEAIVAGGLQAVRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCLTQDGGVESTVHVDVEDHKVD-------GHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVIRARRTVAGDVERESRRWLKSWIEKAHGHQPHGLSLEDGVSLVTCAQSGLGVSAPAFGGETGWPCDKSTPG---LFHRMIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWQAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRATNIASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRCEEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCRLGVPYPFWRYGALIVGHSVEEGLFSLSLDYSEDDNMLKVEVLGGGDKVHAWAALSKVLSVMIKMLSEFPGFRASRSF 3190
M PGTLPV LA LLD D L + L+QNP EHPPEAIV GG+ AVRGY+EA+F GGTT VTRPLKVVIVG ETVGKTSLR SI G PC+T+ GGV+STVHVDV+DH +D GHPIRIFDCAGQ YYGLLQLFLTPRAVYLLVWDA KAS+MD LNLEDLAIAPWLR +TFRVPDANV+LVGNKWD V A VA DVER+SR WL +WIE AH HQP LSLE GVSLV+CA SG AP+FGG WPCDK+ PG LF R+IYNPV D R VTM L P Y LAL +LEELAS SR V L AGT AA EAA+SGAILIRKWEGGLVEYGNY+FLDV WFA VLDPLFSH++DS G I LGG TN SL+RLD H+FEP+LAE+LW ELAPHLL AL SAGLTFP+PNDP GLV++LRMDT+PPP+Y EE + YDL L V CSF LGLPPGFVERLLARCC LG P+PFWRYGAL+VG EEG FSL+L+YSE+D LKV+V G +VHAWA LSKVLSV IKMLSEFPG F
Sbjct: 1 MLCVPGTLPVALASLLDSFDRLHSVGGLDLSQNPWEHPPEAIVTGGMLAVRGYFEAIFRGGTTVVTRPLKVVIVGMETVGKTSLRCSIKAGKPCMTRGGGVDSTVHVDVQDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDAEKASQMDELNLEDLAIAPWLRQMTFRVPDANVVLVGNKWDLVAEANLHVADDVERKSREWLTAWIESAHRHQPPQLSLEAGVSLVSCAPSGRAGWAPSFGGRKAWPCDKNKPGQPGLFRRIIYNPVDDMRAVTMRLSPVYVLALNLLEELASRSR----------------------VDALGTAGTTAAASEAALSGAILIRKWEGGLVEYGNYIFLDVGWFADVLDPLFSHKKDSNGIIYLGGKTVTNDDSLKRLDANHIFEPRLAEDLWGAELAPHLLSALNSAGLTFPIPNDPFEGLVVVLRMDTEPPPDYRTIVEEEQARKYYDLRLVVQCSFRLGLPPGFVERLLARCCHLGFPHPFWRYGALVVGAGAEEGKFSLTLEYSEEDKTLKVQVNGRCSEVHAWATLSKVLSVTIKMLSEFPGLPCQLEF 567
BLAST of mRNA_E-siliculosus-1a_M_contig8.16217.1 vs. uniprot
Match: A0A6H5KZA7_9PHAE (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZA7_9PHAE) HSP 1 Score: 635 bits (1639), Expect = 3.060e-211 Identity = 362/615 (58.86%), Postives = 401/615 (65.20%), Query Frame = 2
Query: 1577 IVAGGLQAVRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCLTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQ--------------------------------------------------------------------------------------VVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVIRARRTVAGDVERESRRWLKSWIEKAHGHQPHGLSLEDGVSLVTCAQSGLGVSAPAFGGETGWPCDKSTPGLFHRMIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWQAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRATNIASLR--RLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRCEEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCRLGVPYPFWRYGALIVGHSVEEGLFSLSLDYSEDDNMLKVEVLGGGDKVHAWAALSKVLSVMIKMLS 3157
I A +AVRGYYEAMFMGGTTAVT PLKVVIVGKETVGKTSLRRSITTG PC+T+D GVESTVHV+VEDHKVDG PIRIFDCAGQ VVYYGLLQ FLTPRAVYLLVWD AKASEM+GLNLEDLAIAP LR LTFRVPDAN++LVGNK DRV +ARRTVA D+E ESR+WL +LV+C+ SGLG+ AP+FG T WPC KSTP LFHR+I+NPV DKR VTMH+PP Y++ALEMLEELASSSRRKAEQRTRGITRADLE+KWQAKVAELN AGTPVAAPEAAMSGAILI SH+RD G IDLGGIR N A R RLD +HVFEP+LAE LW+PELA HLLLALKSAGLTFPLP D NGGLVI LRMDT PEY I+ E+ ++A + DL LTV CSFSLGLP GFVER LA+CC +G PYPFWRYGALIV + D +L +EV GG ++VHAWAALSKVLSV+IKML+
Sbjct: 9 IEAASREAVRGYYEAMFMGGTTAVTPPLKVVIVGKETVGKTSLRRSITTGKPCMTRDSGVESTVHVNVEDHKVDGRPIRIFDCAGQAVKTWLSVEDDPEVLEEEIAMELQAVDEQLAGVTLDDDVPSEEEDDDGMYPVILHPVAQFTLFDTMFQSSAPLQVSVLPHVDHCRQVVYYGLLQQFLTPRAVYLLVWDTAKASEMNGLNLEDLAIAPRLRCLTFRVPDANMVLVGNKLDRVAKARRTVADDLESESRQWL---------------------NLVSCSPSGLGILAPSFGARTDWPCGKSTPELFHRIIFNPVDDKRAVTMHIPPGYQVALEMLEELASSSRRKAEQRTRGITRADLEQKWQAKVAELNSAGTPVAAPEAAMSGAILI-----------------------------SHKRDLDGHIDLGGIRVPNDARARLDRLDRDHVFEPKLAEGLWSPELASHLLLALKSAGLTFPLPQDSNGGLVINLRMDTTRLPEYGIKLEQVHKASEPDLKLTVKCSFSLGLPLGFVERFLAQCCHVGYPYPFWRYGALIV---------------DDGDKILALEVFGGCEEVHAWAALSKVLSVVIKMLT 558
BLAST of mRNA_E-siliculosus-1a_M_contig8.16217.1 vs. uniprot
Match: A0A6H5KNW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW8_9PHAE) HSP 1 Score: 510 bits (1313), Expect = 4.170e-165 Identity = 255/279 (91.40%), Postives = 264/279 (94.62%), Query Frame = 2
Query: 2357 RRKAEQRTRGITRADLEEKWQAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRATNIASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRCEEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCRLGVPYPFWRYGALIVGHSVEEGLFSLSLDYSEDDNMLKVEVLGGGDKVHAWAALSKVLSVMIKMLSEFPGFRASRSFF 3193
RRKA++RTRGITRADLEEKWQAKVAEL+GAGTPVAAPEAA+SGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIR TNIASLRRLDNEHVFEPQLAEELW+ ELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTK PPEYSIR EEANQARKYDLTLTVAC FSLG+PPGFVERLLARCCRLGVPYPFWRYGAL+VG+ EEGLFSLSLDYSE DNMLKVEVLGGG +VHAWAALSKVLSVMIKMLSEFPG FF
Sbjct: 15 RRKAKRRTRGITRADLEEKWQAKVAELSGAGTPVAAPEAAISGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNIASLRRLDNEHVFEPQLAEELWSRELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKSPPEYSIRREEANQARKYDLTLTVACWFSLGVPPGFVERLLARCCRLGVPYPFWRYGALVVGNGAEEGLFSLSLDYSEHDNMLKVEVLGGGGEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFF 293
BLAST of mRNA_E-siliculosus-1a_M_contig8.16217.1 vs. uniprot
Match: A0A6H5KM38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM38_9PHAE) HSP 1 Score: 411 bits (1056), Expect = 3.400e-131 Identity = 204/238 (85.71%), Postives = 212/238 (89.08%), Query Frame = 2
Query: 1700 SLRRSITTGGPCLTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQ------------------VVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVIRARRTVAGDVERESRRWLKSWIEKAHGHQPHGLSLEDGVSLVTCAQSGLGVSAPAFGGETGWPCDKSTPGLFHRMIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSR 2359
SLRRSITTG PC+TQDGG+ESTVHVDVEDHKVDGHPIRIFDCAGQ +VYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRV+RAR TVA DVERESRR+LKSW+EKAHGHQPH LSLE+GVSLVTCAQS LGVSAPAFGG TGWPCDKSTPGLFHRMIYNPV DKRTVTMHLPPSY +ALEMLEELASSSR
Sbjct: 5 SLRRSITTGKPCMTQDGGLESTVHVDVEDHKVDGHPIRIFDCAGQSYAPLDVSVIPHVDHCRQIVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVVRARCTVADDVERESRRFLKSWMEKAHGHQPHRLSLENGVSLVTCAQSDLGVSAPAFGGGTGWPCDKSTPGLFHRMIYNPVDDKRTVTMHLPPSYHVALEMLEELASSSR 242
BLAST of mRNA_E-siliculosus-1a_M_contig8.16217.1 vs. uniprot
Match: D7FM75_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM75_ECTSI) HSP 1 Score: 436 bits (1122), Expect = 6.710e-130 Identity = 269/602 (44.68%), Postives = 349/602 (57.97%), Query Frame = 2
Query: 1424 GLWHTLGQDQAGSMAARPGTLPVDLA--RLLDMLDGLSTWPLAQNPCEHPPEAIVAGGLQA-VRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCLTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWD--AAKASEMDGLN--LEDLAIAPWLRYLTFRVPDANVILVGNKWDRV-------IRARRT-VAGDVERESRRWLKSWI-EKAHGHQPHGLSLEDGVSLVTCAQSGLGVSAPAFGGETGWPCDKSTPGLFHRMIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWQAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRATNIASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRCEEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCRLGVPYPFWRYGALIVGHSVEEGLFSLSLDYSEDDNML----KVEVLGGGDKVHAWAALSKVLSVMIKMLSEFPG 3169
GLW + + G PV A LL +++G S NP +PP ++ + VR Y+ A+ G + V RPLKVV+VGKE+VGKTSLR+SI G T++ G ESTVH+DVEDH++DG PIRIFDCAGQV Y GLLQLFLTP+ ++LLV D + + +G + LEDL W+R L+FRVP A VILVG K DRV AR + AG VE R W+ W ++ H H ++ E+GVSLV C GL P + GWPCD S P L HR+ + R V LP S+ AL +L+E A R + RG+ R +L+ W KV EL G + A E A+ GAI I +EG LV YG++V +DV+W ATVL PL SH+ S G+++LGGI + RL + + EP+LAEELW P+ HLL AL SAGLTFP PND GGLV+LLR+D P + ++ + +D + +C+ G PPGF+ERLL+ CCRLG FWRYG LI S FS+ L+Y+EDD+ L V+ G W ALS LSV+ KMLSEFPG
Sbjct: 287 GLWEVERKSRQGRTTPLSAKEPVPSALDSLLRVVEGCSQVRWGNNPWRYPPAEVMGQSISVHVRQYFNAVLAGSVSTVRRPLKVVVVGKESVGKTSLRQSIVAGKARPTRNHGGESTVHIDVEDHELDGRPIRIFDCAGQVAYTGLLQLFLTPQVIHLLVVDMPSVVGNIENGTSNPLEDLGALRWVRSLSFRVPGAAVILVGTKCDRVKDTDGETTEARLSRAAGMVEDNIRSWIHKWTTQRLHNHHAQSIAFENGVSLVNC---GL----PCDELDGGWPCDVSQPSLLHRITFKDG-KARGVDADLPLSWGCALSLLDETARRVR--GQPGFRGVERTELDGLWHDKVDELKRGGHEMEATEHALDGAISIMAYEGSLVVYGSFVIVDVQWLATVLKPLCSHKDMSMGEVNLGGITVRPGPRVERLVKDGILEPKLAEELW-PDTWEHLLRALSSAGLTFPRPNDKEGGLVVLLRLDKDRPDDVGDILDDFRAS--HDGQIVASCTLLQGAPPGFIERLLSTCCRLGSCNHFWRYGVLIQSRS-----FSVILEYAEDDDTLVGKFSVDAFGDSRTAGPWLALSGCLSVLSKMLSEFPG 870
BLAST of mRNA_E-siliculosus-1a_M_contig8.16217.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI) HSP 1 Score: 382 bits (980), Expect = 1.410e-108 Identity = 245/627 (39.07%), Postives = 333/627 (53.11%), Query Frame = 2
Query: 1484 LPVDLARLLDMLDGLSTWPLAQNPCEHPPEAIVAGGLQAVRGYYEAMFMGGTTAVTRPL-KVVIVGKETVGKTSLRRSITTGGPCLTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGL------------NLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVIRARRTVAGDVERESRRWLKSWIEKAHGHQPHGLSLEDGVSLVTCAQSGLGVSAPAFGG-------ETGWPCD-------KSTPGLFHRMIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSRR-------------------------KAEQRTRGITRADLEEKWQAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDS---YGDIDLGGIRAT-----NIASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRCEEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCRLGVPYPFWRYGALI---VGHSVEEGLFSLSLDYSEDDNMLKVEVLGGGDKVHAWAALSKVLSVMIKMLSEFPGFR 3175
LP L LL L L + + +NP + PPEA+V+ G+ AV+ Y+ +F G V R + KVV+VG+E GKTSLR+S+ TG P T G ESTV +DVE V+G +R++DCAGQV Y GLLQ+FL+PRAV LLV D + DG L++L + WLR L+FR+PD++V++V K D AG +E WL+SW G + + +EDGVSL +C A G ++ W CD +S P L HR++YN + R ++ LP S+ +ALE+L+ L S + Q G+TRADL KW VA L G G V P+ A+ GA+LIR+ EG LV + YVFLDV W A +L PL +HR D GD+ LG T +IAS RL V EP LA LW L+ ++L AL S GLT+PL +DP GLV+LLR+D K P + ++ R + L+V LG+PPG +E++L RCCRLG FWR+G L+ +G + F+L ++YS D + ++V G WAALS +SV M SEFPG R
Sbjct: 227 LPKQLEALLATLSRLG-FLVHENPWQEPPEAVVSKGISAVQEYFTDLFAEGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTS-GSEESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCDLAAGMGTDAAGRIEGAIGEWLESWS----GAGMNAVHVEDGVSLTSCFPPTPNEDGGAALGKRKSPDEDSTWACDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNVLASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVAALEGDGVSVVKPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPSLARVLWPDGLSNYVLPALDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFR--RDHTAVLSVKWKVFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGIAARTFALVVEYSHDKCEVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLR 845 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16217.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16217.1 >prot_E-siliculosus-1a_M_contig8.16217.1 ID=prot_E-siliculosus-1a_M_contig8.16217.1|Name=mRNA_E-siliculosus-1a_M_contig8.16217.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1154bp MASTDRDALIALFRSTGGAGWTRRDNWDTHAAIGTWYGVKVNDQGRVVKLback to top mRNA from alignment at E-siliculosus-1a_M_contig8:2136533..2171765+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16217.1 ID=mRNA_E-siliculosus-1a_M_contig8.16217.1|Name=mRNA_E-siliculosus-1a_M_contig8.16217.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=35233bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:2136533..2171765+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:2136533..2171765+ >mRNA_E-siliculosus-1a_M_contig8.16217.1 ID=mRNA_E-siliculosus-1a_M_contig8.16217.1|Name=mRNA_E-siliculosus-1a_M_contig8.16217.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=6924bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:2136533..2171765+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |